GENSCAN 1.0	Date run:  8-Nov-116	Time: 11:43:26

Sequence gi568815591f:23082086_23297230 : 215145 bp : 41.22% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.03 PlyA -    898    893    6                              -0.45
 1.02 Term -   1557   1322  236  1  2    3   43   171 0.154  -0.40
 1.01 Init -   2447   2363   85  2  1   72  110    75 0.193   9.20
 1.00 Prom -  18826  18787   40                              -1.85

 2.00 Prom +  20332  20371   40                              -4.05
 2.01 Init +  23942  24061  120  1  0   76   86   244 0.999  23.24
 2.02 Intr +  24199  24327  129  0  0  129   41    48 0.060   4.17
 2.03 Intr +  41692  41794  103  0  1   62  108    62 0.148   4.43
 2.04 Intr +  42603  42696   94  1  1   96   95   109 0.883  10.50
 2.05 Intr +  42963  43087  125  0  2   90   91    86 0.995   8.41
 2.06 Term +  47479  47603  125  2  2   70   49   155 0.902   7.37
 2.07 PlyA +  47637  47642    6                              -0.45

 3.00 Prom +  48239  48278   40                              -5.05
 3.01 Init +  48922  48982   61  0  1   28  105    23 0.310  -0.54
 3.02 Intr +  58684  58859  176  2  2   88   62   184 0.972  14.54
 3.03 Intr +  61766  61940  175  1  1  114   97   170 0.996  19.09
 3.04 Intr +  69982  70124  143  2  2   64   88   126 0.806   9.35
 3.05 Intr +  83613  83853  241  2  1  104   82   162 0.809  13.40
 3.06 Intr +  85751  85952  202  0  1  104   58    89 0.852   4.92
 3.07 Intr +  90863  90960   98  2  2   46   77    48 0.710  -1.77
 3.08 Term +  91930  92213  284  2  2   52   48   265 0.916  13.50
 3.09 PlyA +  92954  92959    6                               1.05

 4.00 Prom +  98301  98340   40                              -7.45
 4.01 Init + 100001 100121  121  1  1   96   62   194 0.329  18.00
 4.02 Intr + 102985 103213  229  2  1   88   84   168 0.995  12.41
 4.03 Intr + 104967 105061   95  0  2  126   93    50 0.936   7.99
 4.04 Intr + 111528 111742  215  1  2   60   78   211 0.978  14.81
 4.05 Intr + 114595 114681   87  0  0  120   97     3 0.903   3.65
 4.06 Intr + 117373 117457   85  0  1   82  111   125 0.999  12.67
 4.07 Term + 118083 118660  578  1  2  101   42   334 0.990  23.74
 4.08 PlyA + 118899 118904    6                               1.05

 5.00 Prom + 119308 119347   40                              -9.25
 5.01 Init + 121059 121181  123  2  0   88  100    41 0.549   5.52
 5.02 Intr + 123980 124395  416  1  2   85   83   171 0.526   8.28
 5.03 Intr + 129459 129575  117  0  0   57   94    95 0.623   5.66
 5.04 Intr + 148680 148788  109  0  1   45   70    72 0.138   0.47
 5.05 Term + 151553 151699  147  1  0  103   43   106 0.468   4.52
 5.06 PlyA + 154494 154499    6                               1.05

 6.00 Prom + 158298 158337   40                              -6.45
 6.01 Init + 164773 164842   70  0  1   68   92    89 0.783   6.77
 6.02 Term + 165484 165917  434  2  2   42   55   193 0.282   5.87
 6.03 PlyA + 166281 166286    6                               1.05

 7.00 Prom + 167672 167711   40                              -3.45
 7.01 Init + 171194 171374  181  1  1   49  110   130 0.545  10.69
 7.02 Intr + 172084 172227  144  2  0   73   95   109 0.995   9.43
 7.03 Intr + 177895 178053  159  2  0   76  109   167 0.999  16.64
 7.04 Intr + 178371 178688  318  1  0   39   82   255 0.939  15.01
 7.05 Intr + 184396 184530  135  2  0   64   82   158 0.947  12.42
 7.06 Intr + 185801 185903  103  0  1   20  105   122 0.867   5.41
 7.07 Intr + 187882 188090  209  1  2   93  105   217 0.868  21.70
 7.08 Term + 191436 191533   98  1  2   97   38    69 0.115  -0.05
 7.09 PlyA + 191824 191829    6                               1.05

 8.05 PlyA - 192761 192756    6                               1.05
 8.04 Term - 196082 195889  194  0  2   63   37   155 0.047   4.50
 8.03 Intr - 205564 205418  147  2  0   93   32    86 0.043   2.79
 8.02 Intr - 211788 211628  161  2  2   60   74    78 0.332   2.31
 8.01 Init - 214298 214228   71  2  2   48   70    73 0.288   2.07

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term +  24199  24342  144  0  0  129   42    87 0.936   5.13
S.002 Init +  41716  41794   79  0  1   51  108    51 0.817   4.67


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815591f:23082086_23297230|GENSCAN_predicted_peptide_1|106_aa
MGPQTFCHSFCWTASHISGGASVTLDVAVFVDTFTGWIEAFPTWSEKAIEVSKLLLKEII
SRFWLPKSLQSNNGPYFTVTITPNTSSALGIQYRPHSHGGHSLPGK

>gi568815591f:23082086_23297230|GENSCAN_predicted_CDS_1|321_bp
atggggcctcagaccttctgccacagcttctgttggacagctagccatatctctggagga
gcctcggtaactcttgatgtggcagtatttgttgacacctttactggttggatcgaggct
tttcctacctggtctgaaaaggcaattgaggtttctaaactcctactaaaggaaataatt
tctagattttggctgcctaagagcttacagagcaataatggcccatatttcacagtgaca
attaccccaaacacatcttcagccctaggaattcagtaccgccctcattcgcatggaggc
cacagtcttccgggaaagtag

>gi568815591f:23082086_23297230|GENSCAN_predicted_peptide_2|231_aa
MAASGVEKSSKKKTEKKLAAREEAKLLAGFMGVMNNMRKQASDSAVGRGARKTILEQKCF
SSAEDVAPKSDSWGTPQAGFRRRKTLCDVILMVQERKIPAHRVVLAAASHFFNLMFTTNM
LESKSFEVELKDAEPDIIEQLVEFAYTARISVNSNNVQSLLDAANQYQIEPVKKMCVDFL
KEQVDASNCLASGRVDYIEFNRPQTVGIADLTGKPLIRPENNRPETQLSRD

>gi568815591f:23082086_23297230|GENSCAN_predicted_CDS_2|696_bp
atggcagcctctggggtggagaagagcagcaagaagaagaccgagaagaaacttgctgct
cgggaagaagctaaattgttggcgggtttcatgggcgtcatgaataacatgcggaaacag
gcgagcgattccgcagttggtagaggggcgcgtaaaacaattctcgagcaaaagtgcttc
tcgtctgccgaggatgtagctcccaagtcagactcctgggggactcctcaggctggcttt
cgccgtcggaaaacgttgtgtgacgtgatcctcatggtccaggaaagaaagatacctgct
catcgtgttgttcttgctgcagccagtcatttttttaacttaatgttcacaactaacatg
cttgaatcaaagtcctttgaagtagaactcaaagatgctgaacctgatattattgaacaa
ctggtggaatttgcttatactgctagaatttccgtgaatagcaacaatgttcagtctttg
ctggatgcagcaaaccaatatcagattgaacctgtgaagaaaatgtgtgttgattttttg
aaagaacaagttgatgcttcaaattgtcttgctagtggccgagtcgactacattgaattc
aaccgtccccaaactgtgggtattgctgatctgactgggaagcctctcattcggcctgag
aataatagaccagagacacagttatcaagagactga

>gi568815591f:23082086_23297230|GENSCAN_predicted_peptide_3|459_aa
MTLIPGSVRCQPILRVKNSAGISVLAECLDCPELKATADDFIHQHFTEVYKTDEFLQLDV
KRVTHLLNQDTLTVRAEDQVYDAAVRWLKYDEPNRQPFMVDILAKVRFPLISKNFLSKTV
QAEPLIQDNPECLKMVISGMRYHLLSPEDREELVDGTRPRRKKHDYRIALFGGSQPQSCR
YFNPKDYSWTDIRCPFEKRRDAACVFWDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLG
PPTPRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVE
ANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFVKDKIFAVG
GQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAAVGSIVYVLAGFQGVGRLGHILE
YNTETDKWVANSKVRAFPVTSCLICVVDTCGANEETLET

>gi568815591f:23082086_23297230|GENSCAN_predicted_CDS_3|1380_bp
atgacattgatacctggtagtgttcgctgccaacctatcttaagggtaaagaattctgct
ggtataagtgtgctagcggagtgtctagattgtcctgaattgaaagcaactgcagatgac
tttattcatcagcactttactgaagtttacaaaactgatgaatttcttcaacttgatgtc
aagcgagtaacacatcttctcaaccaggacactctgactgtgagagcagaggatcaggtt
tatgatgctgcagtcaggtggttgaaatacgatgaacctaatcgccagccatttatggtt
gatatccttgctaaagtcaggtttcctcttatatcaaagaatttcttaagtaaaacggta
caagctgaaccacttattcaagacaatcctgaatgccttaagatggtgataagtggaatg
aggtaccatctactgtctccagaggaccgagaagaacttgtagatggcacaagacctaga
agaaagaaacatgactaccgcatagccctatttggaggctctcaaccacagtcttgtaga
tattttaacccaaaggattatagctggacagacatccgctgcccctttgaaaaacgaaga
gatgcagcatgcgtgttttgggacaatgtagtatacattttgggaggctctcagcttttc
ccaataaagcgaatggactgctataatgtagtgaaggatagctggtattcgaaactgggt
cctccgacacctcgagacagccttgctgcatgtgctgcagaaggcaaaatttatacatct
ggaggttcagaagtaggaaactcagctctgtatttatttgagtgctatgatacgagaact
gaaagctggcacacaaagcccagcatgctgacccagcgctgcagccatgggatggtggaa
gccaatggcctaatctatgtttgtggtggaagtttaggaaacaatgtttctgggagagtg
cttaattcctgtgaagtttatgatcctgccacagaaacatggactgagctgtgtccaatg
attgaagccaggaagaatcatgggctggtatttgtaaaagacaagatatttgctgtgggt
ggtcagaatggtttaggtggtctggacaatgtggaatattacgatattaagttgaacgaa
tggaagatggtctcaccaatgccatggaagggtgtaacagtgaaatgtgcagcagttggc
tctatagtttatgtcttggctggttttcagggtgttggtcgattaggacacattctcgaa
tataataccgaaacagacaaatgggttgccaactccaaagttcgtgcttttccagtcaca
agttgtttaatttgtgttgtcgatacttgtggagcaaatgaagagacccttgaaacatga

>gi568815591f:23082086_23297230|GENSCAN_predicted_peptide_4|469_aa
MAICQFFLQGRCRFGDRCWNEHPGARGAGGGRQQPQQQPSGNNRRGWNTTSQRYSNVIQP
SSFSKSTPWGGSRDQEKPYFSSFDSGASTNRKEGFGLSENPFASLSPDEQKDEKKLLEGI
VKDMEVWESSGQWMFSVYSPVKKKPNISARHKGSPSPHQTQEPSWPHPVDSTPGPQVELP
ASPAVCAHTPQPLGGRWDWVPVEQGVALLVEAQAAQERTELNSVQRLINQWRNRVNELKS
LNISTKVALLSDVKDGVNQAAPAFGFGSSQAATFMSPGFPVNNSSSDNAQNFSFKTNSGF
AAASSGSPAGFGSSPAFGAAASTSSGISTSAPAFGFGKPEVTSAASFSFKSPAASSFGSP
GFSGLPASLATGPVRAPVAPAFGGGSSVAGFGSPGSHSHTAFSKPSSDTFGNSSISTSLS
ASSSIIATDNVLFTPRDKLTVEELEQFQSKKFTLGKIPLKPPPLELLNV

>gi568815591f:23082086_23297230|GENSCAN_predicted_CDS_4|1410_bp
atggccatttgtcaattcttccttcaaggccggtgccgctttggagatcggtgctggaac
gaacatcccggtgctaggggtgcaggaggaggacggcagcaaccgcagcagcagccttca
ggtaataatagacgtggatggaatacaactagccagagatattccaatgtcatccagcca
tccagtttctccaaatccacaccatgggggggcagcagagatcaagaaaagccatatttc
agttcttttgattctggagcttcaactaacaggaaggaaggctttggattgtctgagaac
ccatttgcttcacttagtcctgatgagcagaaagatgaaaagaaacttctggaaggaatt
gtaaaagatatggaggtttgggaatcatcagggcagtggatgttttctgtttattcacca
gtgaaaaagaaacctaatatttcagctagacataaaggttctccaagtccccaccagact
caggagcccagctggcctcacccagtggattccacaccagggccacaggtggagctaccc
gccagtcccgcggtgtgtgcccacactcctcagcccttgggtggtcgatgggactgggtg
ccggtggagcagggggtggcgctcctcgtggaggctcaggctgctcaggagcgcacggag
ctaaattctgtccaacgtttaataaatcaatggaggaacagggtaaatgaactgaaaagt
ctaaatatatcaactaaagtagctttgctctctgatgtaaaggatggagtaaatcaagca
gcacctgcatttggatttggcagcagtcaagcagcaacatttatgtcgccaggctttcca
gtcaataacagcagcagtgataatgctcagaactttagttttaaaacaaactctggattt
gctgctgcctcttctggaagccctgctggttttgggagttccccagcatttggagctgca
gcctctaccagttcaggtatctctacttctgctccagcttttggatttgggaagcctgaa
gtcacatcggctgcatcattttcattcaaaagccctgcagcttccagttttggatcacct
ggattttcaggacttccagcttccttggcaacaggtcctgtcagagctccagtggcccca
gcctttggaggtggcagttctgtggctggttttggtagtccgggctcacattctcacact
gctttttctaagccatccagtgacacttttggaaatagcagcatatccacttctctgtca
gcctcaagcagcatcattgcaacagataatgtgttattcacacccagagataaactaaca
gtagaagaactggaacaatttcaatccaagaaatttactctgggaaaaattccattaaag
cctccacctctggaacttctaaatgtttaa

>gi568815591f:23082086_23297230|GENSCAN_predicted_peptide_5|303_aa
MHTYWCQKSRKLVTPRPRLRGIAASENQKQVTMRWQQLGIKTRGAPLWLPTGRAQASKPR
RTSLPHPTSVTVGGGSPCPDPAAGSCPASTKPRRAAETQCLRVAAGEAGREAWRPPQHRA
AETVRVCRAREGGLATQASSAASLGHGAARVRARVTALFPLDETCRVLRTTDKGLNGLGR
GHRCEVWWAFIPFPRSTLRLHGQSAVNCPSPVPTLRAPRNPIPSAEATCSAQAPSDSCGP
WPSPIDVQCSLSQALVTDTQVASNHPLQRTREKTDFSEDGTRKSWYYVDKNTAGSPPKLL
HMK

>gi568815591f:23082086_23297230|GENSCAN_predicted_CDS_5|912_bp
atgcatacatactggtgtcagaagtcaagaaaactggtaactcccagacctaggctaagg
ggcatcgcggcttcagaaaatcagaaacaggtaacaatgaggtggcagcagctgggtata
aagacacggggggccccgctgtggctgcccactggccgggcgcaggcctcgaagccgcgg
cgaacctctcttccccaccccacctcggtgactgttggcggcggctctccctgcccagac
cccgccgccggatcctgcccggcctcgacgaaaccccgccgagccgccgagacgcagtgt
ctccgggtggcggcgggagaggcgggccgggaagcatggcggccgccccaacaccgcgcg
gcggagaccgttagggtgtgcagggcccgggaaggcggtctcgcgacgcaggcaagctcg
gccgcctctttaggccacggagccgcgcgagtccgggcccgggtgaccgctctgttccca
ctggacgagacctgccgagtcctcaggacaacggacaaaggccttaacgggcttgggaga
ggtcatcgctgtgaagtctggtgggcattcatcccttttcctcgcagcacgctcagactg
cacgggcagtctgcagttaactgtccatcaccagtacccactctgcgggctcccagaaac
ccaattccttcggcagaagccacatgttccgctcaggccccatctgacagctgtggcccc
tggcccagccccatagacgttcagtgttccctttcacaggccctggtgacagacacccag
gttgcctccaatcatcctctgcaacgaaccagggaaaagacggatttctcggaagatggt
accaggaaatcttggtactatgtggataaaaatacagctggatccccacctaagttactc
catatgaagtga

>gi568815591f:23082086_23297230|GENSCAN_predicted_peptide_6|167_aa
MECLYYFLGFLLLAARLPLDAAKPRVQTTEAVCRFARGRELSRCNPGPGIAGTGRVGSGQ
RRSGFWSEPQRPETWAAPRPRRPRGRALTLSLPTATATRENAYVFGKEVPSQGADPVSAR
STFPARSAPRVLLAARGARHCDGPASHTRPRATEWARNSPQATQRVS

>gi568815591f:23082086_23297230|GENSCAN_predicted_CDS_6|504_bp
atggaatgtctctactatttcctgggatttctgctcctggctgcaagattgccacttgat
gccgccaaacccagggtccagaccactgaagcagtgtgcagattcgcgagaggaagagag
ctgagccgctgtaaccctgggcctgggattgcggggacgggacgggtgggaagcggccaa
aggcgcagcggcttctggtcagagccgcagaggcctgagacgtgggccgcgccccggccc
aggagaccccgcggccgcgccctaaccctcagtctcccgactgcgactgcgacccgggaa
aacgcctacgtttttggaaaggaagtcccatcacagggagctgacccggtgtcagcgcgc
agcacgttcccggcccgcagtgcgccgcgcgtcctcctagcagcccgcggagcccggcac
tgtgatggtcccgcttcccacacgaggccacgggccacagagtgggcaaggaactcgccc
caagccacacagcgggtaagttga

>gi568815591f:23082086_23297230|GENSCAN_predicted_peptide_7|448_aa
MEFVSNIDTGFHDVLGNERPSAYMREHNQLNGWSSDENDWNEKLYPVWKRGDMRWKNSWK
GGRVQAVLTSDSPALVGSNITFAVNLIFPRCQKEDANGNIVYEKNCRNGQYFQKLGRCSV
RVSVNTANVTLGPQLMEVTVYRRHGRAYVPIAQVKDVYVVTDQIPVFVTMFQKNDRNSSD
ETFLKDLPIMFDVLIHDPSHFLNYSTINYKWSFGDNTGLFVSTNHTVNHTYVLNGTFSLN
LTVKAAAPGPCPPPPPPPRPSKPTPSLATTLKSYDSNTPGPAGDNPLELSRIPDENCQIN
RYGHFQATITIVEGILEVNIIQMTDVLMPVPWPESSLIDFVVTCQGSIPTEVCTIISDPT
CEITQNTVCSPVDVDEMCLLTVRRTFNGSGTYCVNLTLGDDTSLALTSTLISVPDRDPAS
PLRMANSALISVGCLAIFVTVISLLVYK

>gi568815591f:23082086_23297230|GENSCAN_predicted_CDS_7|1347_bp
atggaatttgtttcgaatattgatacaggatttcatgatgtgctgggcaatgaaagacct
tctgcttacatgagggagcacaatcaattaaatggctggtcttctgatgaaaatgactgg
aatgaaaaactctacccagtgtggaagcggggagacatgaggtggaaaaactcctggaag
ggaggccgtgtgcaggcggtcctgaccagtgactcaccagccctcgtgggctcaaatata
acatttgcggtgaacctgatattccctagatgccaaaaggaagatgccaatggcaacata
gtctatgagaagaactgcagaaatggtcagtatttccagaaattgggacgatgttcagtg
agagtttctgtgaacacagccaatgtgacacttgggcctcaactcatggaagtgactgtc
tacagaagacatggacgggcatatgttcccatcgcacaagtgaaagatgtgtacgtggta
acagatcagattcctgtgtttgtgactatgttccagaagaacgatcgaaattcatccgac
gaaaccttcctcaaagatctccccattatgtttgatgtcctgattcatgatcctagccac
ttcctcaattattctaccattaactacaagtggagcttcggggataatactggcctgttt
gtttccaccaatcatactgtgaatcacacgtatgtgctcaatggaaccttcagccttaac
ctcactgtgaaagctgcagcaccaggaccttgtccgccaccgccaccaccacccagacct
tcaaaacccaccccttctttagcaactactctaaaatcttatgattcaaacaccccagga
cctgctggtgacaaccccctggagctgagtaggattcctgatgaaaactgccagattaac
agatatggccactttcaagccaccatcacaattgtagagggaatcttagaggttaacatc
atccagatgacagacgtcctgatgccggtgccatggcctgaaagctccctaatagacttt
gtcgtgacctgccaagggagcattcccacggaggtctgtaccatcatttctgaccccacc
tgcgagatcacccagaacacagtctgcagccctgtggatgtggatgagatgtgtctgctg
actgtgagacgaaccttcaatgggtctgggacgtactgtgtgaacctcaccctgggggat
gacacaagcctggctctcacgagcaccctgatttctgttcctgacagagacccagcctcg
cctttaaggatggcaaacagtgccctgatctccgttggctgcttggccatatttgtcact
gtgatctccctcttggtgtacaagtaa

>gi568815591f:23082086_23297230|GENSCAN_predicted_peptide_8|190_aa
MEDRGAAQEEGLEGALFRARAYAHIVSSAFTAVVCSEAVPLNTHIGPLDYWALSQSQTVF
PTASEIGIGVPSCHPDVGALQGKEGFRAKLKSSYERRHLVFTEVALPNRHYSQPWRPHRR
VWIFPVGNYSGSFGTILLKTLKDFPPPKAPSECGHHHPWMTTFSSALTLSLWFEVATHSG
CNECIERIAL

>gi568815591f:23082086_23297230|GENSCAN_predicted_CDS_8|573_bp
atggaggacagaggagcagctcaggaagagggactagaaggggctttgtttagggctcgt
gcttatgctcacattgtttcctcagctttcacagccgttgtttgttctgaagctgtgcct
ctgaacactcacattggccccttggattactgggccctgtcacagagccagactgttttt
cccacagcctcagaaattggtattggggtcccctcttgtcaccccgatgttggcgcatta
caaggtaaggaaggatttagggcaaaacttaaatcctcatatgaacgaaggcacttggta
tttacagaggtcgcacttcccaaccgccactacagccagccatggaggccacaccgaaga
gtttggattttccctgtaggtaactattctggcagctttggaaccattcttttaaaaacc
ttaaaggattttcccccaccaaaagccccatcagaatgtggtcaccatcacccctggatg
accaccttctcatctgcccttacactgtcactctggtttgaagttgctacacattctgga
tgtaatgagtgcattgaacgtattgccctctaa