GENSCAN 1.0	Date run: 17-Aug-118	Time: 17:46:22

Sequence gi568815591f:39897492_40163100 : 265609 bp : 40.26% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.02 PlyA -    930    925    6                               1.05
 1.01 Sngl -  12682  12455  228  1  0  109   55   150 0.868   8.67
 1.00 Prom -  26347  26308   40                              -7.75

 2.00 Prom +  35559  35598   40                              -4.35
 2.01 Init +  40146  40221   76  2  1   96   49    83 0.430   6.50
 2.02 Intr +  52261  52623  363  2  0   -8   66   243 0.903   6.73
 2.03 Intr +  52644  52855  212  1  2   67   76   198 0.847  14.21
 2.04 Term +  53148  54365 1218  2  0   18   44  1397 0.797 118.93
 2.05 PlyA +  55639  55644    6                               1.05

 3.05 PlyA -  56009  56004    6                               1.05
 3.04 Term -  66310  65501  810  1  0   22   41   331 0.147  13.99
 3.03 Intr -  66851  66707  145  1  1   24   41   120 0.112   0.26
 3.02 Intr -  68892  68676  217  1  1  -38  102   154 0.006   0.84
 3.01 Init -  69241  68938  304  1  1   88  -16   292 0.024  16.29
 3.00 Prom -  76009  75970   40                              -4.25

 4.00 Prom +  79029  79068   40                              -6.15
 4.01 Init +  79339  79376   38  0  2   86   20    68 0.191  -0.67
 4.02 Intr +  90108  90767  660  0  0   86   97   587 0.997  49.39
 4.03 Intr + 100003 100173  171  1  0   90   44   180 0.999  11.94
 4.04 Intr + 101870 102009  140  2  2    6   99   263 0.786  18.39
 4.05 Intr + 104370 104540  171  1  0   77   95   227 0.932  21.29
 4.06 Term + 130215 130309   95  1  2   68   42   108 0.182   1.21
 4.07 PlyA + 131272 131277    6                               1.05

 5.00 Prom + 132773 132812   40                              -3.95
 5.01 Init + 137846 137853    8  1  2   83   84     4 0.192  -0.24
 5.02 Intr + 150330 150386   57  0  0   58  121   100 0.352   7.38
 5.03 Intr + 165335 165436  102  2  0   87   86   116 0.500   9.67
 5.04 Intr + 181229 181360  132  2  0   35   89   186 0.760  12.24
 5.05 Intr + 190635 190840  206  0  2   84   65   163 0.653  11.52
 5.06 Intr + 195294 195746  453  1  0   54  114   388 0.605  30.30
 5.07 Term + 196639 197489  851  2  2   89   48   687 0.990  56.82
 5.08 PlyA + 198018 198023    6                               1.05

 6.05 PlyA - 198741 198736    6                               1.05
 6.04 Term - 214315 214303   13  0  1   79   42    31 0.002  -5.70
 6.03 Intr - 236949 236738  212  0  2   24   90   271 0.673  17.69
 6.02 Intr - 237193 237120   74  2  2   52   60   101 0.914   1.91
 6.01 Intr - 237695 237483  213  0  0   97    9   151 0.708   5.86

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl -  69241  68909  333  1  0   88   37   316 0.960  22.27
S.002 Init + 180581 180630   50  1  2   74   41   105 0.924   4.87


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815591f:39897492_40163100|GENSCAN_predicted_peptide_1|75_aa
MELPKVPVLCVKLPGQVEEKSQMGGWVRQVCALALHVWVQAAATVEIGVQFWGHWVNVPG
SSATTSAAQKNPHGD

>gi568815591f:39897492_40163100|GENSCAN_predicted_CDS_1|228_bp
atggagcttccaaaagtccctgtcctttgtgttaagctaccagggcaggtggaggagaaa
agccagatggggggttgggtcagacaagtctgtgctctagctctccatgtgtgggtgcaa
gcagcagccacagtggaaatcggagtacagttctggggccactgggttaatgttccaggg
agtagcgcaactacctctgctgcacagaagaatccacatggggactga

>gi568815591f:39897492_40163100|GENSCAN_predicted_peptide_2|622_aa
MEKDAIHQKHKEGAFIPALMMIVTGGAEREGEERAGAGRAHQEPPRGGGERRKGVAPPPL
LAAAAAAKEEESQGPYLPPQTQKRPCPHLPGNSPPPSPAQSLPQPRAAARSPPPRPAPLP
SPAGRRVREALGRELLSGPGHFRGACGGRRRRRGGGGGGVLLSRPLPSPELAPNVRARWS
EAATKVVLPRCAARAESAAKAAPPPPGALGGLGTPPQAMPSSSDTALGGGGGLSWAEKKL
EERRKRRRFLSPQQPPLLLPLLQPQLLQPPPPPPPLLFLAAPGTAAAAAAAAAASSSCFS
PGPPLEVKRLARGKRRAGGRQKRRRGPRAGQEAEKRRVFSLPQPQQDGGGGASSGGGVTP
LVEYEDVSSQSEQGLLLGGASAATAATAAGGTGGSGGSPASSSGTQRRGEGSERRPRRDR
RSSSGRSKERHREHRRRDGQRGGSEASKSRSRHSHSGEERAEVAKSGSSSSSGGRRKSAS
ATSSSSSSRKDRDSKAHRSRTKSSKEPPSAYKEPPKAYREDKTEPKAYRRRRSLSPLGGR
DDSPVSHRASQSLRSRKSPSPAGGGSSPYSRRLPRSPSPYSRRRSPSYSRHSSYERGGDV
SPSPYSSSSWRRSRSPYSPVLR

>gi568815591f:39897492_40163100|GENSCAN_predicted_CDS_2|1869_bp
atggagaaggatgctattcaccagaaacacaaagaaggagcatttattccagccttaatg
atgatagtgacggggggagcggagagggaaggggaggagcgagccggggcaggccgcgca
caccaggagcctcctcgtggagggggggagcggaggaaaggggtagctccgccacctctg
ctggcggcggcggcggcggcgaaagaagaagaaagtcagggcccgtacctaccgccacag
actcagaaacgcccctgcccccatctccccggaaatagccccccgcccagccccgcacag
tcgctgccccaaccgagagccgcagcccggtcgcccccgcctcgccccgccccgctgccc
agccccgcgggccgcagagtgcgcgaggccctaggccgggagttgttgtcaggcccaggc
cacttccgaggcgcctgcggaggacgacgtcgacgccgaggaggaggcggtggaggcgtg
ttgttgtctcgcccactcccctcccctgaacttgcacccaacgtcagggcgcgatggagt
gaagcggcgacgaaggtggtacttccgcgttgcgctgcccgagccgagagcgcggccaag
gccgctcccccacccccgggggcacttggaggactcgggactcccccgcaggcgatgccg
agcagctcggacacggcgctggggggaggcgggggcctgagctgggcggagaagaagttg
gaggaacgccgcaagcggaggcgattcctgtcccctcagcagccgccgctgctgttgccg
ctcctgcagccgcagctcctgcaaccgccgccgcccccgccgcctctgctcttcctggct
gctcccggcacggccgccgccgcagccgccgccgccgcggcctcctcctcttgcttcagc
ccgggcccccctctggaggtcaagcggctggcgagaggcaagaggcgcgcaggagggcgg
cagaagcggcgtcgcgggccccgcgccgggcaggaggcggagaagcgtcgggtcttctcg
ctgccccagccgcagcaggacggcggtggcggtgctagtagcggcgggggtgtgaccccg
ctggtggaatacgaggatgtgagctcccagtccgagcaggggctgctgctggggggggcc
agcgcggcaacggcggcgacggctgccgggggaacggggggcagcggcgggagtccggcc
tcctcctccggcacccagcggcgcggggaggggtcggagcgcaggccccgccgggaccgc
cgcagcagcagtggccgcagcaaggagcgccaccgcgagcaccggcggcgggatgggcag
cgcggtggcagcgaggcctccaagtcccgcagccgccacagccacagcggcgaggaacgg
gccgaggtcgccaagagcggcagcagcagcagcagcggcggccgccggaaaagcgcttcg
gccacatccagcagcagtagcagccgcaaggaccgggactcgaaggcccaccgcagccgg
actaagtcgtccaaggagccgccttcggcctacaaggaaccgcccaaggcctaccgggag
gacaagaccgagcctaaggcctacaggcggcggcggtccctcagcccactgggaggccgg
gacgacagcccggtgtcccacagggcctctcagagcctgaggagccgcaagtcccccagc
ccggcaggaggtggcagcagcccctattctcggcggctgccgcgctccccgagcccctac
agtcgccgccgctcccccagctacagccgccacagctcctacgagcggggcggcgacgtg
tcccctagtccctacagcagcagcagctggcgccgctctcgcagtccctacagccctgtg
ctcaggtga

>gi568815591f:39897492_40163100|GENSCAN_predicted_peptide_3|491_aa
MGKNRAEKLKNLKIRAPLLLQRNAAPHQQRNKAGQRMTSTSSEKKASFRQSNYSELKEEI
RTHGKEVKNLEKKLDEWLTRITNAQKSLKDLMELKIKAQELQRVSVMEDEMKQEEKFRKK
RIKRNEQSLQEIWNHVKTPNLHLIGVPESDRENGTKLENTLQDIIQENFPNLARLNQEEA
EYLNRPITGSEIEAIINSLPTKKSPGPHGFTAEFYQRYKEELVLMDVSQNNKSYDKPTAN
IIPNGQKLEAFPLKTGTRQGCPLSPLLFNIVLEVLARAIRQEKEIKGIQLGKEKVKLSLF
ADDMIVYLENPNISAQNLLKLIGNFSKVSGYKINVQKLQAFLYTNNRQTESQIMSELPFT
IALKRVKYPGIQLTRDVKDLFKENYKLLLNEIKEDTNKWKNIPSSWVGRINIMKMAILPK
VIYRFNAIPIKLPMTFFTELEKTTLKFIWNQKRAHTAKSILSQKDKAGGITLPDFKLYYK
ATVTKTAWYWY

>gi568815591f:39897492_40163100|GENSCAN_predicted_CDS_3|1476_bp
atggggaaaaacagagcggaaaaactgaaaaatctaaaaatcagagcgcctctcctcctc
caaaggaacgcagctcctcaccagcaacggaacaaagctggacagagaatgacttcgacg
agttcagagaagaaggcttcattcagacaatcaaactactccgagctaaaggaggaaatt
cgaacccatggcaaagaagttaaaaaccttgaaaaaaaattagatgaatggctaactaga
ataaccaacgcacagaagtccttaaaggacctgatggagctgaaaatcaaggcacaagaa
ctacaaagggtatcagtgatggaagatgaaatgaagcaagaagagaagtttagaaaaaaa
agaataaaaagaaacgaacaaagcctccaagaaatatggaaccatgtgaaaacaccaaat
ctacatctgattggtgtacctgaaagtgacagggagaatggaaccaagttggaaaacact
ctgcaggatattatccaggagaacttccctaatctagcaagactaaaccaggaagaagct
gaatatctgaatagaccaataacaggctctgaaattgaggcaataattaatagcttacca
accaaaaaaagtccaggaccacatggattcacagctgaattctaccagaggtacaaggag
gagctggtattgatggacgtatctcaaaataataagagctatgacaaacccacagccaat
atcataccgaatgggcaaaaactggaagcattccctttgaaaactggcacaagacaggga
tgccctctctcaccactactattcaacatagtgttggaagttctggccagggcaatcagg
caggagaaggaaataaagggtattcaattaggaaaagagaaagtcaaattgtccctgttt
gcagatgacatgattgtatatctagaaaaccccaacatctcagcccaaaatctccttaag
ctgataggcaacttcagcaaagtctcaggatacaaaatcaatgtacaaaaattacaagca
ttcttatacaccaataacagacaaacagagagccaaatcatgagtgaactcccattcaca
attgctttaaagagagtaaaatacccaggaatccaacttacaagggatgtgaaggacctc
ttcaaggagaactacaaactactgctcaatgaaataaaagaggacacaaacaaatggaag
aacattccaagctcatgggtaggaagaatcaatatcatgaaaatggccatactgcccaag
gtaatttatagattcaatgccatccccatcaagctaccaatgactttcttcacagaattg
gaaaaaactactttaaagttcatatggaaccaaaaaagagcccacactgccaagtcaatc
ctaagccaaaaggacaaagctggaggcatcacgctacctgacttcaaactatactacaag
gctacagtaacgaaaacagcatggtactggtactaa

>gi568815591f:39897492_40163100|GENSCAN_predicted_peptide_4|424_aa
MESEIEDEGTAVRRSGKSRSRSPYSSRHSRSRSRHRLSRSRSRHSSISPSTLTLKSSLAA
ELNKNKKARAAEAARAAEAAKAAEATKAAEAAAKAAKASNTSTPTKGNTETSASASQTNH
VKDVKKIKIEHAPSPSSGGTLKNDKAKTKPPLQVTKVENNLIVDKATKKAVIVGKESKSA
ATKEESVSLKEKTKPLTPSIGAKEKEQHVALVTSTLPPLPLPPMLPEDKEADSLRGNISV
KAVKKEVEKKLRCLLADLPLPPELPGGDDLSKSPEEKKTATQLHSKRRPKICGPRYGETK
EKDIDWGKRCVDKFDIIGIIGEGTYGQVYKARDKDTGEMVALKKVRLDNEKEGFPITAIR
EIKILRQLTHQSIINMKEIVTDKEDALDFKKDKVCVAVKPALFLRVHDSDWAVGALQFSY
EVET

>gi568815591f:39897492_40163100|GENSCAN_predicted_CDS_4|1275_bp
atggaaagtgaaattgaggacgaggggactgctgtacgacggtctggaaaatcccgaagc
agaagcccgtattcatctaggcattcaagatctcgtagcaggcacagattgtctagatcc
agaagtcgtcattctagtatttctcctagcacactaactctgaagagtagcctggcagct
gaattgaacaagaataaaaaagcacgagcagcagaggcagcaagagccgcagaagcagcg
aaagctgcagaagcaactaaggctgctgaggctgctgccaaggctgcaaaagcttcaaac
acttctacacctaccaaggggaacacggaaactagtgccagtgcatcacaaacaaaccat
gtgaaggatgtgaagaaaattaaaattgaacatgcaccttctccctcaagtggtggaact
ttaaaaaatgacaaagcaaaaacaaagccacctcttcaggtaacgaaggtggaaaataat
ttgattgtagataaagccaccaagaaagcagtcatagttggaaaggagagtaaatctgct
gctacaaaggaggaatcagtatctcttaaagagaaaaccaaaccacttacaccaagcata
ggagccaaggagaaggagcaacatgtagctttagtcacctctacattaccaccgttacct
ttgcctcccatgctgcctgaagataaagaagctgatagcttacgaggaaatatttcagta
aaagcagttaaaaaagaagtagaaaagaaactccgatgtcttcttgctgatttaccgctg
ccccctgagctaccaggaggagatgatctttcaaagagtccagaggaaaagaaaacagca
acacagttacatagtaaaaggaggcctaaaatatgtgggcctcgctatggtgaaaccaaa
gaaaaagatattgactggggaaaacgctgcgtggataaatttgatatcatcggaattatt
ggagaaggtacttacggacaagtttacaaagccagggataaagacactggagaaatggta
gccttaaaaaaagtacgtctggataatgaaaaggaaggctttccaattacagcaattcga
gaaattaaaattctccggcagcttacccatcagagtattatcaatatgaaggaaatagtg
actgataaagaagatgctttggatttcaagaaggacaaagtctgtgtagctgtgaagcct
gctctgtttctacgggtacatgactcagattgggcagttggagccttacagttctcttac
gaggttgagacttaa

>gi568815591f:39897492_40163100|GENSCAN_predicted_peptide_5|602_aa
MDRGQIKLADFGLARLYSSEESRPYTNKVITLWYRPPELLLGEERYTPAIDVWSCGIPAA
ALDLFDYMLALDPSKRCTAEQALQCEFLRDVEPSKMPPPDLPLWQDCHELWSKKRRRQKQ
MGMTDDVSTIKAPRKDLSLGLDDSRTNTPQGVLPSSQLKSQGSSNVAPVKTGPGQHLNHS
ELAILLNLLQSKTSVNMADFVQVLNIKVNSETQQQLNKINLPAGILATGEKQTDPSTPQQ
ESSKPLGGIQPSSQTIQPKVETDAAQAAVQSAFAVLLTQLIKAQQSKQKDVLLEERENGS
GHEASLQLRPPPEPSTPVSGQDDLIQHQDMRILELTPEPDRPRILPPDQRPPEPPEPPPV
TEEDLDYRTENQHVPTTSSSLTDPHAGVKAALLQLLAQHQPQDDPKREGGIDYQAGDTYV
STSDYKDNFGSSSFSSAPYVSNDGLGSSSAPPLERRSFIGNSDIQSLDNYSTASSHSGGP
PQPSAFSESFPSSVAGYGDIYLNAGPMLFSGDKDHRFEYSHGPIAVLANSSDPSTGPEST
HPLPAKMHNYNYGGNLQENPSGPSLMHGQTWTSPAQGPGYSQGYRGHISTSTGRGRGRGL
PY

>gi568815591f:39897492_40163100|GENSCAN_predicted_CDS_5|1809_bp
atggacagagggcagataaaacttgcagactttggacttgctcgattgtatagctcagaa
gaaagtcggccgtatactaacaaggtaattactttatggtaccgtccacctgaactgcta
ctgggagaagaacgatacacaccagccattgatgtatggagctgtggtattcctgcagct
gcgctagacttatttgattacatgcttgccttggatcctagtaagcgctgcactgctgaa
caggctcttcagtgcgagttcctccgagatgtggaaccctcaaaaatgcctccaccagat
ctccctttatggcaagattgtcatgagttatggagtaaaaagcgaagaagacagaagcag
atgggcatgactgatgatgtttccacaattaaagcccccaggaaggacttgtctctgggc
ttggatgacagcagaaccaacacaccccagggtgtgctgccatcttcacagctgaaatct
cagggcagctcaaatgtggcacctgtaaaaacaggccctggacagcacttaaaccacagt
gaattggcaattctactaaacctactacaatctaaaacaagtgttaatatggctgatttt
gtccaagtgttgaacattaaggtaaactctgagactcaacagcagctaaataaaataaac
cttcctgctggaattttggcaacaggtgaaaaacagacagatccatcaacaccacaacag
gagtcttcgaaaccgttgggaggaattcagccttcttctcagaccatccagcctaaagtg
gagactgatgctgcccaggcggctgtgcagagtgcatttgcagttctgttgactcagtta
ataaaggctcagcagtcaaagcagaaagatgtgctactagaagagagggaaaatggatcg
ggacatgaagcgtcattacaactcaggccacctccagaacctagcactccggtgtcggga
caagatgacctcatccagcatcaagatatgaggatcttggagctaacgccagaaccagac
cggcctcgaattctgcctcctgaccaacgacctcccgagcctcctgaaccaccaccagtc
actgaggaagatctagattatcggacagaaaaccagcatgtacccaccaccagttcttca
ttaactgaccctcatgccggagtgaaggcagccctgttacagctgcttgctcagcatcag
ccccaggatgaccccaaaagagaaggtgggattgattatcaagcaggagacacttacgtg
tccacttcagactacaaggacaactttggatcctcttctttctcttctgctccttatgtt
agcaatgatggtctaggaagcagttctgctccaccactagaacgacgtagtttcattgga
aattcagatattcagtctttggataactacagtactgcttcatctcattctggtggtcca
cctcagccttctgccttttctgagtcatttcccagttcagtagctggatatggagacatt
tacctcaatgctggtcccatgttgtttagtggagacaaggaccatagatttgaatatagc
catggtcctattgcagtcctggcaaacagcagtgacccttccacggggccagagagtact
catcctttgccagcaaagatgcacaactataactatggtggtaacttacaggaaaatccg
agtggccccagcctcatgcatggacagacctggacttctcctgcccaaggacctggatat
tcacaaggatacaggggacatattagcacatcaactggcagaggcagaggcagagggtta
ccatactga

>gi568815591f:39897492_40163100|GENSCAN_predicted_peptide_6|170_aa
XRPRRQAGAGIPLATQTESRRVPDCGRPVHSPLPPPRPEKRQVLRRAATLASVASIACVS
DGIGPGASGELRWLRSEDCFGKGLAVLCGGPVDTVPTGTGVRTTRRRTGPGLGRTGAVTL
RDTAAASRGAGSGLRPLAATLAPTPGPPRGPSSNSATPQGSSRPTPSALR

>gi568815591f:39897492_40163100|GENSCAN_predicted_CDS_6|513_bp
nggcgcccgaggaggcaagctggggcagggatccctttagccacccagaccgaatctcgg
agggtacctgactgcgggcggccagtccacagccccctcccgccgccccggccggagaag
aggcaggttctgcgcagagctgccaccctcgccagcgtcgccagcatcgcgtgcgtctca
gatggcatcggtcccggtgcaagcggcgaactccggtggctgcggtcggaggactgtttt
ggtaaaggactagcagttctctgcggagggccggttgatacagttccgacgggtacggga
gtccgcaccacacgccgccgtacgggccccggtctaggccgtacgggagcagtcactctc
cgcgacacggcggcagcttcccggggggccggttcgggtctccgtcccctggcggctacc
ctggctcctactccaggtcccccgcggggtcccagcagcaattcggctactccccagggc
agcagcagacccacccccagtgcccttcgataa