GENSCAN 1.0	Date run:  7-Nov-116	Time: 22:26:39

Sequence gi568815578r:19723453_19923943 : 200491 bp : 43.74% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.03 PlyA -     47     42    6                               1.05
 1.02 Term -   2609   2529   81  2  0   33   46   100 0.274  -2.01
 1.01 Init -   5435   5400   36  2  0   84   98    35 0.309   4.12
 1.00 Prom -  26314  26275   40                               0.34

 2.00 Prom +  29329  29368   40                              -4.86
 2.01 Init +  30921  31038  118  2  1   84  109    93 0.920  11.37
 2.02 Intr +  33486  33569   84  1  0  134   35    54 0.905   4.49
 2.03 Intr +  33977  34285  309  0  0    9   57   169 0.687   2.18
 2.04 Intr +  46040  46065   26  0  2   63   82    56 0.733   0.24
 2.05 Intr +  47214  47390  177  2  0  106   72    43 0.865   4.62
 2.06 Intr +  47824  47925  102  0  0   89   76    39 0.346   3.17
 2.07 Intr +  59383  59512  130  0  1   55   79   116 0.661   7.67
 2.08 Term +  85722  86176  455  1  2   62   43   206 0.670   8.82
 2.09 PlyA +  89178  89183    6                               1.05

 3.02 PlyA -  90365  90360    6                               1.05
 3.01 Sngl - 100491  99994  498  0  0   90   47   488 0.946  40.95
 3.00 Prom - 115006 114967   40                              -4.96

 4.03 PlyA - 116639 116634    6                               1.05
 4.02 Term - 121289 121116  174  2  0  -45   33   550 0.997  33.96
 4.01 Init - 122352 122236  117  0  0   71  -33   107 0.191  -2.90
 4.00 Prom - 129918 129879   40                              -2.26

 5.02 PlyA - 130675 130670    6                               1.05
 5.01 Sngl - 132088 131054 1035  1  0   58   37   385 0.898  27.52
 5.00 Prom - 134017 133978   40                              -6.46

 6.00 Prom + 137498 137537   40                              -6.56
 6.01 Init + 144555 144642   88  2  1   73   76    75 0.554   5.61
 6.02 Term + 151167 151249   83  1  2  129   47    46 0.492   2.46
 6.03 PlyA + 152188 152193    6                               1.05

 7.03 PlyA - 152755 152750    6                               1.05
 7.02 Term - 193486 193320  167  2  2   96   38    65 0.805   0.38
 7.01 Intr - 198321 198184  138  1  0  139   72    53 0.959   9.24

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term +  60716  60816  101  0  2   22   48   137 0.837   1.39


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815578r:19723453_19923943|GENSCAN_predicted_peptide_1|38_aa
MSDSVSMRIQGTFSGISYWIDCPNKPEDVTSPNSAFDK

>gi568815578r:19723453_19923943|GENSCAN_predicted_CDS_1|117_bp
atgagtgactctgttagcatgcgcatccaaggcacattttctggaatcagttactggatt
gattgtcccaacaaaccagaagatgtgacatcaccaaattcagcttttgataaatag

>gi568815578r:19723453_19923943|GENSCAN_predicted_peptide_2|466_aa
MAYGASEAIGQHQSSAAKPRRSQSESLGPEFQGLGEWLPGLQLPQVRETFALFTDISQAL
ELRLAPAGWMLAGNRPRSSGVPACLRGLQLGLRRAPSADPNRVPGGVGGPLASEAEAKQP
AQASRAYPTLENLPRNQEPQPAQASRVGPFQPLQQIPGSVVGRRGSLWERVIIIDPPSLQ
EFHVFTYNLYVKKTKTCFSSALTTITNTEAFCDQMCGVFPHTPSSGHQLGILQLNSHRGL
PAVNQLISMQKHHFGDSKDFWSCMAGNRVKDQRCIDFMAIQQVFDGLTASPAYLYAGCPA
QACNRRSLECLAALDTGAEDQGKIADDLNDSSDHQQPTELPNQEIVRWKQRLQAKKAEAG
QGRNETVINVGVKRLTSPVHTPAQRPASAGGWWRPCGGWGLGSGGEHGSRIWQSPSVPAT
SPLKSVDDDGDLGASFECPEGETGEADTQLWEEIKGIKNSQHKSKV

>gi568815578r:19723453_19923943|GENSCAN_predicted_CDS_2|1401_bp
atggcctacggggcttccgaggcgatcgggcagcatcagtcttcagccgctaagccgaga
aggagtcagtcagagagcctcgggccagagttccaggggctcggggagtggctgccaggc
cttcagctcccccaggtgagggagacctttgctttgttcaccgacatatcccaagcatta
gaactgcgcctggcaccagcaggctggatgctggctgggaaccggccccgcagctccggc
gtccccgcctgcctgcgcggccttcagctggggttacggagggctcccagcgccgatcca
aaccgcgttccaggcggggtgggcgggcccctggccagcgaggccgaagcaaaacaaccc
gcccaggcgtccagagcgtatccaaccctggagaacctgccccggaaccaagagccgcag
ccagctcaggcctctcgagtggggcctttccagcccctgcaacagatcccgggatctgta
gttgggcggaggggctcgttatgggaaagggtcatcatcatcgaccctccatctctgcaa
gaattccatgttttcacgtataacctgtacgtgaaaaaaacaaaaacgtgtttttcctct
gctctcacaacaatcaccaacacagaagccttctgtgaccaaatgtgtggggtttttccc
cacacaccaagtagtggacaccagctgggcatcctccagctcaattcccacaggggactg
ccagctgtcaatcagctcattagcatgcagaaacatcactttggagattctaaggatttt
tggagttgtatggcaggaaacagggttaaagaccagagatgtattgacttcatggccatt
caacaggtgtttgacggtttgactgcatcccctgcctacctgtatgctggctgtccagct
caggcctgcaacaggaggagcctagaatgcctagcagctttggacactggggcagaagat
caggggaaaattgcggatgatctgaatgatagcagtgaccaccagcaacctacagagctg
cccaaccaggaaattgtcagatggaagcaacgcttgcaggcaaagaaggctgaagcaggc
caaggcaggaatgaaacagtcataaatgttggagtgaagcgactgacctccccggtccac
accccggcccagcgtcctgcatctgctggaggatggtggagaccatgtggaggatgggga
cttggcagtggaggagaacatggaagcaggatatggcagtcccctagcgtcccagccaca
agtcctctgaagagtgtggatgacgatggtgacttaggtgcatccttcgaatgtcctgag
ggggagactggagaagcagacacgcaattgtgggaagaaatcaaaggcataaagaactca
cagcacaagtccaaagtctga

>gi568815578r:19723453_19923943|GENSCAN_predicted_peptide_3|165_aa
MLPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKAMGDWKGLRITV
KLTIQNRQAQIEVVPSASAMIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIARQMRHQS
LARELSGTTKEILGTAQSVGCNVDGRHPHDIIDDINSGAVECPAS

>gi568815578r:19723453_19923943|GENSCAN_predicted_CDS_3|498_bp
atgctgccgaagttcgacccgaacgagatcaaagtcgtatacctgaggtgcaccggaggt
gaagtcggtgccacttctgccctggcccccaagatcggccccctgggtctgtctccaaaa
aaggttggtgatgacattgccaaggcaatgggtgactggaagggcctgaggattacagtg
aaactaaccattcagaacagacaggcccagattgaggtggtgccttctgcctctgccatg
atcatcaaagccctcaaggaaccaccaagagacagaaagaaacagaaaaacattaaacac
agtgggaatatcacttttgatgagatcgtcaacattgctcgacagatgcggcaccaatcc
ttagccagagaactctctggaaccactaaagagatcctggggactgcccagtctgtgggc
tgtaatgttgatggccgccaccctcatgacatcatagatgacatcaacagtggtgctgta
gaatgcccagctagttaa

>gi568815578r:19723453_19923943|GENSCAN_predicted_peptide_4|96_aa
MGKDFMTKTPKAMATKAKIDKWDLIKLKSFCTAKETIIRKKKKKKKKKKKKKKRKRKRKK
KKKEEEEEEEEEEEEEEEEEEEEEEEEEAAAAAAAL

>gi568815578r:19723453_19923943|GENSCAN_predicted_CDS_4|291_bp
atgggcaaagacttcatgactaaaacaccaaaagcaatggcaacaaaagccaaaatagac
aaatgggatctaattaaactaaagagcttctgcacagcaaaagaaactatcatcagaaag
aagaagaagaagaagaagaagaagaagaagaagaagaagaggaagaggaagaggaagaag
aagaagaaggaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaa
gaagaagaagaagaagaggaagaagcagcagcagcagcagcagctctctag

>gi568815578r:19723453_19923943|GENSCAN_predicted_peptide_5|344_aa
MANVPTRKSPGPDGFTTEFYQRYEEELAPFLLKLFQSIEKEGILPNSFYEASIILIPKPD
RDTTKKVNFRQISLMNIDAKVLNNILANRIQQHIKKLIHQDQVGFIPGMQGWFNIRKSIN
VIQHINRTKDKNHMIISIDAEKAFDEIQQPFMPKTLNKLGIDGTYLKIIRAIYDKPTANI
ILNGQKLEAFPLKTGTRQGCPLSPLLFNIALEVLARAIRQEKEIKGIQLGKEEVKLSLFA
DDMIIYLENPIVSAQNLLKLISNFSKVSGYKINVQKSQAFLYTNNRQTESQIMSELPFTI
ASKRTKYLGIQFIRDVKDLFKENYKPLLNETKEDTNKWKNIPCS

>gi568815578r:19723453_19923943|GENSCAN_predicted_CDS_5|1035_bp
atggcaaatgtaccaaccagaaaaagtccaggaccagacggattcacaactgaattctac
cagaggtatgaggaggagctggcaccattccttctgaaactattccaatcaatagaaaaa
gagggaatcctccctaattcattttatgaggccagcatcatcctgataccaaagcctgac
agagacacaacaaaaaaagtgaattttagacaaatatccctgatgaacattgatgcaaaa
gtcctcaataacatactggcaaaccgaatccagcagcacatcaaaaagcttatccaccaa
gatcaagtgggcttcatccctgggatgcaaggctggttcaacatacgcaaatcaataaat
gtaattcagcatataaacagaaccaaagacaaaaaccacatgattatctcaatagatgca
gaaaaggcctttgacgaaattcaacagcccttcatgccaaaaactctcaataaattaggt
attgatgggacgtatctcaaaataataagagctatttatgacaaacccacagccaatatc
atactgaatgggcaaaaactggaagcattccctttgaaaactggcacaagacagggatgc
cctctctcaccactcctattcaacatagccttggaagttctggccagggcaatcaggcag
gagaaagaaataaagggtattcaattaggaaaagaggaagtcaaattgtccctgtttgca
gatgacatgattatatatttagaaaaccccatcgtctcagcccaaaatctccttaagctg
atcagcaacttcagcaaagtctcaggatacaaaatcaatgtgcaaaaatcacaagcattc
ttatacaccaataacagacaaacagagagccaaatcatgagtgaactaccattcactatt
gcttcaaagagaacaaaatacctaggaatccaatttataagggatgtgaaggacctcttc
aaggagaactacaaaccactgctcaacgaaacaaaagaggacacaaacaaatggaagaac
attccatgctcatag

>gi568815578r:19723453_19923943|GENSCAN_predicted_peptide_6|56_aa
MSGVGHAGAQRAEPSSTAGTDTKPGPKEALFPVTTSEGNNLHSNASLRVGFQGNGD

>gi568815578r:19723453_19923943|GENSCAN_predicted_CDS_6|171_bp
atgtctggcgtggggcatgctggtgcacaaagagccgaaccaagctccacagcaggaact
gacaccaagccaggccccaaggaggccttgtttcctgtgactacctctgaaggaaacaat
ttgcacagcaatgcttctctcagagttggcttccaggggaatggagactaa

>gi568815578r:19723453_19923943|GENSCAN_predicted_peptide_7|101_aa
XSNPHFTMRFSWEHFLIATFTQFFGSGPVSGEPDLGHPQPSCLAPLDAYEFQMHRWSQDL
YIKQHLPKWFPPNTSSVGCEQARFQYKHYCSNNSGSTLNIR

>gi568815578r:19723453_19923943|GENSCAN_predicted_CDS_7|306_bp
ngctccaacccccacttcaccatgcgtttctcttgggagcacttcctgatagccactttc
acacagttcttcggctctgggcctgtttctggggaacccgacctaggacacccccagcct
tcctgcttggcgccgctcgatgcctatgaatttcaaatgcacagatggagccaggatctg
tatatcaagcagcatctccccaagtggtttccacccaacacaagcagtgtaggatgtgaa
caggcacgatttcaatacaaacactactgctcgaacaacagtggaagcacattaaacatt
cgataa