GENSCAN 1.0	Date run:  8-Nov-116	Time: 10:14:01

Sequence gi568815582f:85701206_85905112 : 203907 bp : 50.32% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.11 PlyA -    358    353    6                               1.05
 1.10 Term -   6861   6803   59  1  2   67   55    55 0.478  -2.05
 1.09 Intr -   9102   8959  144  1  0   50   94   254 0.740  22.45
 1.08 Intr -  34030  33985   46  1  1  130  116    31 0.864   8.08
 1.07 Intr -  40484  40364  121  1  1  105    7    64 0.525   0.50
 1.06 Intr -  40852  40530  323  1  2    6   23   235 0.586   3.46
 1.05 Intr -  41932  41714  219  1  0   77   46   250 0.792  18.20
 1.04 Intr -  49833  49721  113  1  2  137  101    34 0.491   9.70
 1.03 Intr -  53176  53075  102  2  0   94  100   -11 0.355   0.85
 1.02 Intr -  55049  54921  129  0  0   76   69    39 0.429   1.47
 1.01 Init -  71844  71790   55  0  1  101   45    44 0.167   0.85
 1.00 Prom -  72491  72452   40                              -1.86

 2.07 PlyA -  73263  73258    6                               1.05
 2.06 Term -  78662  78503  160  1  1   70   48   213 0.991  12.91
 2.05 Intr -  79268  79174   95  2  2  106   81    84 0.978   8.26
 2.04 Intr -  80121  80006  116  1  2   66  115   169 0.992  17.57
 2.03 Intr -  85344  85323   22  0  1   48   96    42 0.659  -1.88
 2.02 Intr -  87845  87735  111  2  0  106   55   132 0.815  12.28
 2.01 Init -  98090  97860  231  2  0   90  107   430 0.857  43.36
 2.00 Prom -  99383  99344   40                              -8.66

 3.00 Prom +  99798  99837   40                              -6.56
 3.01 Init + 100001 100073   73  1  1   38  115     1 0.030  -0.67
 3.02 Intr + 103732 103899  168  2  0   46   15   181 0.471   6.52
 3.03 Intr + 104528 104659  132  0  0   98  101   108 0.978  13.72
 3.04 Term + 105533 105669  137  0  2   47   54   181 0.988   8.78
 3.05 PlyA + 105774 105779    6                               1.05

 4.05 PlyA - 114599 114594    6                               1.05
 4.04 Term - 115351 115050  302  2  2   11   48   389 0.427  22.58
 4.03 Intr - 118878 118718  161  2  2   57  105   111 0.533   9.33
 4.02 Intr - 119024 118895  130  0  1   65    8    83 0.482  -2.25
 4.01 Init - 120346 120289   58  1  1   58   94    71 0.829   5.12
 4.00 Prom - 121420 121381   40                              -7.36

 5.00 Prom + 121746 121785   40                              -5.66
 5.01 Sngl + 122032 122751  720  0  0   36   37  2179 0.934 203.83
 5.02 PlyA + 122793 122798    6                               1.05

 6.00 Prom + 123903 123942   40                              -9.26
 6.01 Init + 125283 125634  352  2  1   74    1   207 0.595   7.93
 6.02 Intr + 126750 126888  139  1  1  113   68   -11 0.027  -1.08
 6.03 Intr + 128009 128141  133  2  1   64   88     7 0.025  -1.05
 6.04 Intr + 131494 131643  150  0  0   83  -18   162 0.553   5.46
 6.05 Intr + 133951 134102  152  0  2   40   88    84 0.406   2.56
 6.06 Intr + 134470 134610  141  1  0   34   91    80 0.572   2.37
 6.07 Intr + 139352 139444   93  2  0   83   30    82 0.024   0.98
 6.08 Intr + 152710 152824  115  1  1   40  121    51 0.335   4.05
 6.09 Intr + 161083 161270  188  0  2  105  -18   109 0.248   0.49
 6.10 Intr + 161452 161647  196  1  1   53   55   149 0.371   7.52
 6.11 Term + 175277 175468  192  1  0   69   32   118 0.018   1.72
 6.12 PlyA + 175727 175732    6                               1.05

 7.00 Prom + 176490 176529   40                              -2.46
 7.01 Init + 176613 176740  128  2  2   78   63    68 0.074   2.93
 7.02 Intr + 184070 184257  188  2  2   88   37    87 0.050   2.93
 7.03 Intr + 188677 188761   85  2  1   82   99    21 0.122   1.48
 7.04 Intr + 189017 189041   25  2  1   91  121    12 0.238   2.83
 7.05 Intr + 197935 198018   84  0  0   48   96    77 0.916   4.52
 7.06 Intr + 201012 201068   57  2  0   93   75    45 0.649   2.78
 7.07 Intr + 201330 201430  101  2  2   54   13    83 0.735  -3.69
 7.08 Intr + 201810 201984  175  0  1   55   98   220 0.966  19.64

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init + 197556 197738  183  2  0   25   64   164 0.905   4.82


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815582f:85701206_85905112|GENSCAN_predicted_peptide_1|436_aa
MGARWLTPVIPALWEAEAERQSEVHSIRLKSQAEAVPTSLGPTLMLLNKPVPARGPGIGL
SGDSDHRQVWGHSPGLVSGVCRFSAPCSSSQVVGQGSSPRPPEPDRRRHHHQRPGGPRAP
RARLRSEPTKKEAEAGPRSQREWTGLSTLPHKFTPNTTGHTVELGPRSGGALVVPSGNHT
DDDDEDDDGKGGSNNDDSDKDDNSSEEPIGSELIHYCEDGTKQAVHERLPHDPDTSHQAQ
CSESNFNMRFGRDKYPNYSNKNDENNDDDEDDGDNSVPGPVLEAGGSMPVWQRRTQNLGD
RAPAPQTREMTCLSQSCACRLCAVLGGRQKQDDNEGKFRDTVGDEKTCCVKTLHACRGAD
MGLKMSCLKGFQMCVSSSSSSHDEAPVLNDKHLDVPDIIITPPTPTGMMLPRDLGSTVWL
DETGSCPDDGEIDPEA

>gi568815582f:85701206_85905112|GENSCAN_predicted_CDS_1|1311_bp
atgggggcgcggtggctcacgcctgtaatcccagcactttgggaggctgaggcagaaaga
caaagtgaggttcattccatccgtctgaaatctcaggcagaggctgttccgacgtccctg
ggccccacgctgatgctgctcaataaaccagtgcctgccaggggcccgggcatagggctc
agtggggattctgatcacaggcaggtgtggggccacagccctggcctcgtctccggggtc
tgcaggttcagtgctccctgcagctcttcccaggtggtgggacaaggctcgtcgccgcgg
ccccccgagcccgaccgccgccgccaccaccaccagcgcccgggcgggcctcgcgcgcct
cgggcgcggctccgcagtgagcccaccaagaaggaagcggaggctggccccagatctcaa
agggagtggacagggctctccacactcccacataaattcacccccaacacaacaggccac
actgtggaattggggccacgtagtgggggtgccctggtggtacctagtggcaatcacact
gatgacgatgatgaggatgatgatggtaaaggtggcagcaacaatgatgacagtgacaag
gatgacaacagtagtgaggaaccaatagggagcgaactcatccattactgtgaggacggc
accaagcaagctgttcatgagagattgccccatgacccagacacctcccatcaggcccag
tgttctgaatcaaatttcaacatgaggtttggaagggacaaatatccaaactatagcaat
aagaatgatgagaacaatgatgatgatgaagatgatggtgacaactctgtcccaggccct
gtcctggaggctggtggctcaatgcctgtttggcagaggaggacacagaacctgggggac
cgagccccagcacctcagactcgggaaatgacctgcttgagccagtcctgtgcctgccgc
ctttgtgctgtccttggagggaggcagaagcaggatgacaatgagggcaagttcagggac
actgtgggagatgagaaaacttgctgtgtgaaaactctccacgcctgcagaggtgccgac
atggggcttaagatgtcctgcctgaaaggctttcaaatgtgtgtcagcagcagcagcagc
agccacgacgaggcccccgtcctgaacgacaagcacctggacgtgcccgacatcatcatc
acgccccccacccccacgggcatgatgctgccgagggacttggggagcacagtctggctg
gatgagacagggtcgtgcccagatgatggagaaatcgacccagaagcctga

>gi568815582f:85701206_85905112|GENSCAN_predicted_peptide_2|244_aa
MPGVKLTTQAYCKMVLHGAKYPHCAVNGLLVAEKQKPRKEHLPLGGPGAHHTLFVDCIPL
FHGTLALAPMLEVALTLIDSWCKDHSYVIAGYYQANERVKDARYVDAEPSVGEELFEEDT
SVLNGINWNVVAYFFDSPNQVAEKVASRIAEGFSDTALIMVDNTKFTMDCVAPTIHVYEH
HENRWRCRDPHHDYCEDWPEAQRISASLLDSRSYETLVDFDNHLDDIRNDWTNPEINKAV
LHLC

>gi568815582f:85701206_85905112|GENSCAN_predicted_CDS_2|735_bp
atgcccggggtgaaactgaccacccaggcctactgcaagatggtgctgcacggcgccaag
tacccgcactgcgccgtcaacgggctcctggtggccgagaagcagaagccgcgtaaggag
cacctccccctgggcggccccggcgcccaccacaccctcttcgtggactgcatccccctc
ttccacggcaccctggccctcgcccccatgctggaggtggctctcaccctgattgattca
tggtgcaaagatcatagctacgtgattgctggttattatcaagctaatgagcgagtaaag
gatgccaggtacgtggatgcagaaccctctgtgggcgaggaattgtttgaggaggacacc
tcagtgttgaatggcattaactggaatgtggtagcctatttctttgacagtccaaaccag
gttgcagagaaggtggcctccagaatcgccgagggcttcagcgacactgcgctcatcatg
gtagacaacaccaagtttacgatggactgcgtagcgcctacgatccacgtgtacgagcac
catgagaacagatggcggtgcagagacccacaccatgactactgtgaagactggccagag
gcacagaggatctcagcctcgctcctggacagccggtcctacgagacgctcgtggatttc
gataaccacctggatgacattcggaatgactggacaaacccagagatcaataaagctgtc
ctacacttgtgctag

>gi568815582f:85701206_85905112|GENSCAN_predicted_peptide_3|169_aa
MLATRVFSLVGKRAISTSVCVRAHESVVKSEDFSLPAYMDRRDHPLPEVAHVKHLSASQK
ALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNRGSNEWKTVVGGAMFFIGFTALVIMW
QKHYVYGPLPQSFDKEWVAKQTKRMLDMKVNPIQGLASKWDYEKNEWKK

>gi568815582f:85701206_85905112|GENSCAN_predicted_CDS_3|510_bp
atgttggctaccagggtatttagcctagttggcaagcgagcaatttccacctctgtgtgt
gtacgagctcatgaaagtgttgtgaagagcgaagacttttcgctcccagcttatatggat
cggcgtgaccaccccttgccggaggtggcccatgtcaagcacctgtctgccagccagaag
gcattgaaggagaaggagaaggcctcctggagcagcctctccatggatgagaaagtcgag
ttgtatcgcattaagttcaaggagagctttgctgagatgaacaggggctcgaacgagtgg
aagacggttgtgggcggtgccatgttcttcatcggtttcaccgcgctcgttatcatgtgg
cagaagcactatgtgtacggccccctcccgcaaagctttgacaaagagtgggtggccaag
cagaccaagaggatgctggacatgaaggtgaaccccatccagggcttagcctccaagtgg
gactacgaaaagaacgagtggaagaagtga

>gi568815582f:85701206_85905112|GENSCAN_predicted_peptide_4|216_aa
MTANSAPRAGKVAQIQMRAGYFKNKVLVHCELGQSNARRYMQLKLGKGTFFQHCKPAADP
YKKGCAKSESVQRILGGEIMFPALQSCDLLQDVPAGKDPVGGRARQLEERESQQLPVSTV
GEAMSSKVSRDTLYEAVWEVLRGNQHKHRKFLETVESQISLKNYDPQKDKRFSGTIRLKS
TPRPKFSVCVLEDQQHCDEAKAMGIPHMDITWTSRR

>gi568815582f:85701206_85905112|GENSCAN_predicted_CDS_4|651_bp
atgaccgccaactccgcgccgcgggccgggaaggtggcccagattcaaatgcgggcaggc
tacttcaagaataaagtcctcgtgcactgtgagttagggcagagcaatgccagacgctac
atgcaactgaaactgggaaaaggcacatttttccagcattgtaagcctgccgcagaccct
tataaaaagggctgtgccaagtcagagtctgtgcaaagaattcttggtggtgaaattatg
tttccagccttgcagagctgtgacctgctgcaagacgttcctgctggcaaggaccctgta
ggaggcagagcccggcagctagaggagagggaatcacagcagctgcctgttagcacagtg
ggagaagccatgagcagcaaagtctctcgcgacaccctgtacgaggcagtgtgggaagtc
ctacgtgggaaccagcacaagcaccgcaagttcctagagacagtggagtcacagatcagc
ttgaagaactatgacccccagaaggacaagcgcttctcaggcaccatcaggctgaagtcc
actccccggcccaagttctccgtgtgtgtcctggaggaccagcagcactgtgacgaggcc
aaggccatgggtatcccccacatggacatcacatggacatcgaggcgctga

>gi568815582f:85701206_85905112|GENSCAN_predicted_peptide_5|239_aa
MLKGTENVRYSSCSGGSCGLESSLGFTFIITITIIIIIAIITITIITIIIITINIIITIN
ITITILIINITITITIITITVLIITITIITIIIITINIIITITIITIIITINITITILIN
IITIITIIIITINIIITIIIITITIIITINITITITILIINITITINITTITITILIITT
IITIITIIVIITIITIMIIITVTITIIITISIFILIVIATITIVIFIGLKTMVSVLFLL

>gi568815582f:85701206_85905112|GENSCAN_predicted_CDS_5|720_bp
atgctgaaggggacagaaaatgtgagatacagttcctgttcaggaggatcttgtggtcta
gagagtagtcttggcttcaccttcatcatcaccatcaccatcatcattatcattgccatc
ataaccatcaccatcatcaccatcatcatcatcaccatcaacatcatcatcaccatcaac
atcaccatcaccatcctcatcatcaacatcaccatcaccatcaccatcatcaccatcact
gtcctcatcatcaccatcaccatcatcaccatcatcatcatcaccatcaacatcatcatc
accatcaccatcatcaccatcatcatcaccatcaacatcaccatcaccatcctcatcaac
atcatcaccatcatcaccatcatcatcatcaccatcaacatcatcatcaccatcatcatc
atcaccatcaccatcatcatcaccatcaacatcaccatcaccatcaccatcctcatcatc
aacatcaccatcaccatcaacatcaccaccatcaccatcaccatcctcatcatcaccacc
atcatcaccatcatcaccatcattgtcatcatcaccataatcaccatcatgatcatcatc
actgtcaccatcaccattatcatcaccatcagcatcttcatcctcatcgtcattgccacc
atcaccattgtcatcttcataggcttaaagacaatggtgtctgttctgtttctcctgtaa

>gi568815582f:85701206_85905112|GENSCAN_predicted_peptide_6|616_aa
MNCGRATPESRILQLIWKQQMYLRQQEGFWKHAGGMRREAAEGLCHRKPLLTNVKQKVAI
DRSYRCLQLQQKKYRHVESIPTPGKEGRERNWENEGAPTVSEMFSFSEANTEKLSCTEQL
PPNLCSWRRALVTGHETLREVFEIKIIITDSWGLEQREAGLFMLCFWLHVFLVVGVFLCP
SVFPSEMGELGHESPLTKGSSHVCVAWAPPFIEEAGPPSGGASHAGHAWRTCQVPVGGRL
SPGRSDSGTAFSDYTAEVECEKEKALPSELNSDPFQEPPVLLLYVLALCWVLFQVPAKCH
LTQPSRPSGREAQASQQRLWGVCFMQLLLSNPELAKKLRVYDLASAQTFQSKRLCRPYLR
FILQAAGPRHTACSQNSGWLQRKFAHVHLSRETGTSGPNGSYNLEVKCSRELLELMHDSC
IQAAKVRLGPACCGSEEQTLEQERWMRRVRSTCSRKRRDEDSPGVEKNKEILKMFIGLAV
EGWPHTLLTLLLPYLPWMHVSATCRLEAKDVGQHSWEQTEMAQATGPGCPLENAAWKVHA
DVAAENQHPFDHEENYKPVLNKINEDTNKWKNIPRSWIGRINIMKMAILPKVIYRFNAIP
SKLRMTFFTELDKTTL

>gi568815582f:85701206_85905112|GENSCAN_predicted_CDS_6|1851_bp
atgaactgcggcagggctacacccgagagtcgcatcctgcagttaatctggaagcagcag
atgtacctgcgtcaacaggaaggattttggaaacatgcagggggcatgagaagagaggct
gctgagggtctgtgccataggaagcctctactgacaaatgttaaacagaaggtggcaata
gaccgttcctacagatgccttcagctgcagcagaagaaatacaggcatgtggaatccata
ccaaccccgggaaaggagggcagggagcggaactgggagaatgaaggggcccccactgta
tctgagatgttttcgttctctgaagcaaacacagaaaaactgtcctgcacggagcagctg
ccgcccaatctctgctcgtggagacgagcgttggtcactggccatgaaacccttcgtgaa
gtttttgaaataaaaataataataacagatagttggggactggagcagcgggaggctggg
ctgtttatgctgtgtttttggttgcacgtgtttttggttgttggtgtttttctctgcccc
tcggtatttccttccgaaatgggtgaactcgggcatgagtctccactcaccaaaggatcc
tcccacgtctgtgtggcctgggcgccgcctttcattgaggaagctgggccgccatctgga
ggcgcctcgcacgcgggacacgcatggaggacctgccaggtgcctgttggtggccgcctg
tccccagggcgttctgactcagggacagctttcagcgactacacggcagaagtggagtgt
gaaaaggaaaaagctttgccctctgagctcaactctgatccctttcaggaaccaccggtc
ctcctgttgtacgtccttgccctgtgctgggtgctgttccaggtgcctgccaagtgtcat
ctcacgcagccctccaggcctagcgggagggaggcccaggcatctcagcagaggctatgg
ggtgtctgcttcatgcagctcctgctgtctaaccccgagctcgccaagaaactgcgtgtt
tatgacctggcttctgcacagacatttcaaagcaagagactgtgcagaccctacctgcgc
ttcatcctgcaagcagccgggccacgccacacagcctgctcccagaactcagggtggctg
caacggaagttcgcacatgtacatttaagtcgagagactgggacttcaggccctaatggc
agctataatttggaagtcaaatgcagcagggagctcttagagctgatgcatgattcctgc
atacaggcagccaaggtgagattggggcctgcctgctgcggaagtgaggaacagacgttg
gagcaggagagatggatgaggagagtccggtctacgtgttcaaggaagcgaagggatgaa
gactcacctggtgtggagaagaacaaagaaatcctgaaaatgttcattggtttggcagtg
gagggatggccacacacgctcctgaccctgctcttgccatatctgccctggatgcacgtt
tcggccacgtgccgcctggaagcaaaggatgtaggtcagcattcatgggagcagacagag
atggcccaggctacaggtcccggctgcccattggagaacgcagcttggaaagtacacgct
gatgtggccgctgagaaccaacacccctttgaccatgaggagaactacaaaccagtgctc
aacaaaataaatgaggacacaaacaaatggaagaacattccacgctcatggataggaaga
atcaatatcatgaaaatggccatactgcccaaggtaatttatagattcaatgccatcccc
agcaagctacgaatgactttcttcacagaattggataaaactactttatag

>gi568815582f:85701206_85905112|GENSCAN_predicted_peptide_7|281_aa
MEYYAAIKKDEFMSFVGTRMKLETIILSKLSQGHQTLHVLTHRSEFGIPGFHLAAASPYP
IHSWPWACTARLWLGDLSGYRFEEFTCRSPSLSRVYSHEHFEVALGTGGSHVTRDLIPLV
ERLLKHSPLLSGLRCTCCTSAKAARPLAHRLERGSKRGNAGGETAAGRRQLVVGVAQEGS
LDNNNDIWHTARTQYSIRECGASWASGSPVGSSDNGLLSEGTWMCDRNGGRRLRQWLIEQ
IDSSMYPGLIWENEEKSMFRIPWKHAGKQDYNQEVDASIFK

>gi568815582f:85701206_85905112|GENSCAN_predicted_CDS_7|843_bp
atggaatactatgcagccataaaaaaggatgagttcatgtcctttgtagggacacggatg
aagctggaaaccatcattctcagcaaactatcacaaggacatcaaacactgcatgtactc
actcataggtctgaatttggaattcctggcttccaccttgcagcagcctccccctacccc
atccattcttggccctgggcctgtacagccaggctctggctgggtgatctttccggatac
cgctttgaagagtttacctgccgatctccaagtttatcacgagtgtattcccatgaacat
ttcgaggtagcactagggacaggtggctcccacgtcaccagggacctcattccacttgta
gaaagattgttaaagcacagcccattattaagtggactgagatgcacctgctgcacatct
gcaaaggccgcgcgaccgctggcgcatcgcctggagcgcggcagcaagcgtgggaacgcg
ggcggcgagacggcggcaggacggcggcagttggtcgtaggagttgcccaggaaggaagt
ttggataataataatgacatctggcatacggcacggacgcagtattctatcagggaatgt
ggggccagctgggcatctggtagcccagttggttcttcggataatgggctgctcagtgaa
ggaacctggatgtgtgaccggaatggtggtcggcggcttcgacagtggctgatcgagcag
attgacagtagcatgtatccaggactgatttgggagaatgaggagaagagcatgttccgg
atcccttggaaacacgctggcaagcaagattataatcaggaagtggatgcctccattttt
aag