GENSCAN 1.0	Date run:  8-Nov-116	Time: 06:22:54

Sequence gi568815596f:60660134_60897157 : 237024 bp : 43.22% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   1629   1707   79  2  1   85   76    79 0.732   7.62
 1.02 Term +  18980  19125  146  0  2   49   42   124 0.329   1.97
 1.03 PlyA +  19405  19410    6                               1.05

 2.03 PlyA -  22572  22567    6                               1.05
 2.02 Term -  22882  22668  215  2  2   39   43   231 0.997  11.09
 2.01 Init -  23111  22964  148  2  1   86   42   169 0.999  12.35
 2.00 Prom -  31214  31175   40                              -5.66

 3.00 Prom +  32416  32455   40                              -4.86
 3.01 Init +  32688  32797  110  2  2   80   92    36 0.849   2.89
 3.02 Intr +  34289  34451  163  2  1  109   59   122 0.887  11.38
 3.03 Intr +  36433  36481   49  0  1   64   77     6 0.103  -4.65
 3.04 Term +  51325  51677  353  2  2   45   41   189 0.014   4.55
 3.05 PlyA +  51783  51788    6                               1.05

 4.03 PlyA -  51803  51798    6                               1.05
 4.02 Term -  52789  52685  105  1  0  103   48    68 0.118   2.71
 4.01 Init -  57287  57234   54  2  0   83   53    73 0.137   2.58
 4.00 Prom -  66731  66692   40                              -5.06

 5.03 PlyA -  67860  67855    6                               1.05
 5.02 Term -  75405  74757  649  2  1   50   35   239 0.928   8.35
 5.01 Init -  75585  75422  164  0  2   80   26   178 0.950  10.00
 5.00 Prom -  79567  79528   40                              -0.96

 6.00 Prom +  89667  89706   40                              -1.86
 6.01 Init +  96477  96631  155  2  2   86   36   123 0.927   4.36
 6.02 Intr + 100001 100162  162  2  0   77   91   164 0.999  14.69
 6.03 Intr + 101608 101674   67  1  1   80  116    61 0.998   7.01
 6.04 Intr + 110325 110378   54  2  0   97  100    61 0.937   7.38
 6.05 Intr + 120811 120864   54  0  0   98   66    21 0.435   0.08
 6.06 Intr + 121752 121872  121  2  1   86   92    60 0.796   6.27
 6.07 Intr + 122553 122637   85  1  1   98   84     1 0.837  -0.42
 6.08 Intr + 126814 126933  120  1  0   86   89    38 0.691   3.31
 6.09 Intr + 127378 127487  110  1  2   60  110    16 0.429   0.93
 6.10 Intr + 133838 134058  221  0  2  120   98    -3 0.493   1.92
 6.11 Intr + 134831 134887   57  1  0  104   87    48 0.976   5.38
 6.12 Term + 136929 137027   99  2  0   83   42   146 0.996   7.63
 6.13 PlyA + 138806 138811    6                               1.05

 7.00 Prom + 139858 139897   40                              -4.76
 7.01 Init + 144715 144762   48  0  0   74   80   109 0.711   7.70
 7.02 Intr + 157894 158016  123  0  0   46   69    60 0.199   0.68
 7.03 Term + 161723 161857  135  1  0   79   42   123 0.622   4.82
 7.04 PlyA + 166945 166950    6                               1.05

 8.04 PlyA - 167330 167325    6                               1.05
 8.03 Term - 180929 180725  205  1  1  106   50   153 0.902  10.14
 8.02 Intr - 181186 181045  142  2  1   85   47    50 0.635   0.01
 8.01 Init - 201590 201536   55  2  1   81   64    39 0.245   2.25
 8.00 Prom - 205552 205513   40                              -5.46

 9.00 Prom + 216704 216743   40                              -3.96
 9.01 Init + 221708 221717   10  1  1  109  117    11 0.642   5.72
 9.02 Intr + 231550 231692  143  2  2   96   90    56 0.924   6.67
 9.03 Intr + 234264 234412  149  2  2   79   81    98 0.295   7.23

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596f:60660134_60897157|GENSCAN_predicted_peptide_1|74_aa
MGPLESTMRWVLKKEAEGGNRYAICRSPSQGKIPEKSWLLLKHKYTPEIGVWQKFLLPAA
GVSPNSTNVQVPQC

>gi568815596f:60660134_60897157|GENSCAN_predicted_CDS_1|225_bp
atggggcctttggagagtaccatgcgatgggtgttgaagaaggaagcagaagggggcaat
cgctatgcgatatgcagatccccttctcaaggaaagatcccagagaaatcctggctgctc
ctcaagcacaagtacacccccgaaataggagtgtggcagaaattcctccttcccgcagct
ggtgtctctccaaactcaaccaatgtccaagtcccccagtgctga

>gi568815596f:60660134_60897157|GENSCAN_predicted_peptide_2|120_aa
MNHAVQTVFTPANTSHPLNYEMLKEEHEVAVLRVPHNPVPPTSTVIHIHTFTYSVKSRDR
KMVGDLTGAQAYASTAKCLNVCTLILGIRVTTTLIILFTSSSMIIFQAISQMIKNLQGQQ

>gi568815596f:60660134_60897157|GENSCAN_predicted_CDS_2|363_bp
atgaaccacgctgtccaaaccgtcttcactcccgccaacaccagccaccccctcaactat
gaaatgctcaaggaggagcatgaggtggctgtgctgagggtgccccacaaccctgttccc
ccgacatccaccgtgatccacatccacacattcacctactccgtgaagtctagggacagg
aagatggttggcgacctgactggggcccaggcctacgcctccactgccaagtgcctgaac
gtttgcaccctcatcctgggcatccgtgtgaccacaacactcatcatccttttcaccagt
agttctatgataatattccaagcaatttctcaaatgataaagaatctccaaggccagcag
tag

>gi568815596f:60660134_60897157|GENSCAN_predicted_peptide_3|224_aa
MNQFWNRQCWWLHNIVNVYNATQSYTQNGYSSKHFVMKIRDSKDAMLFRIKQERERTGGS
SVKDYYGPGLEEAHITSSHPTGQNSAAWEAEGFTEKSKKVCFASLGKAITKGGAAKMKYN
PFVTSDRSKNCKRHFNAPSHTRRKIMSSPLSKELRQKYNVRSKTIQKDDEVQVARGHCKG
QQIGQIIQVYRKKYAIYIERVQWEKANSIAVPVGIHPARWLSLD

>gi568815596f:60660134_60897157|GENSCAN_predicted_CDS_3|675_bp
atgaaccagttctggaatagacagtgctggtggctgcacaacattgtgaatgtgtataac
gccactcaatcatacactcaaaatggttacagtagtaaacattttgttatgaaaatcaga
gattctaaggacgccatgctcttccgcatcaagcaggaaagagaaagaactggaggctca
tctgtaaaagattattacggtccaggcctggaagaggcacacatcacgagttcacatccc
actggccagaactcagctgcttgggaagctgagggatttactgagaaatccaagaaagtc
tgttttgcatccttaggcaaagccatcaccaaaggtggagcagccaaaatgaagtacaat
ccctttgtgacttctgaccgaagcaagaactgcaaaaggcatttcaatgcaccttcccac
actcgcagaaagattatgtcttcccctctttccaaagagctgagacaaaagtacaatgtt
cgatcgaagaccatccaaaaggatgacgaagttcaggttgcgcgaggacactgtaagggt
cagcaaattggccaaataatccaggtttacaggaagaaatatgccatctacattgaacgg
gtgcagtgggaaaaggctaacagcatagctgtccctgtgggcattcacccagcaaggtgg
ttatcactagactaa

>gi568815596f:60660134_60897157|GENSCAN_predicted_peptide_4|52_aa
MGRMRWLTPVIPALSEAEVMLMQEVGSHGLGQLHPCGFAGIAPLLAAFTGWH

>gi568815596f:60660134_60897157|GENSCAN_predicted_CDS_4|159_bp
atgggccggatgcggtggctcacacctgtaatcccagcactttcggaggccgaggtcatg
ctgatgcaagaggtgggctcccacggccttggacagctccacccctgtggctttgcaggt
atagcccctctcctggcggctttcactggctggcattga

>gi568815596f:60660134_60897157|GENSCAN_predicted_peptide_5|270_aa
MKKESLNQSLAEWKLFIYNPTTGEFLWRTAKSWGLILLFYLIFYGFLAALFSFTILNDEV
PKYRDQILNPGLMVFPKPVTALEYAFSRSDLTSYAGYTEDLKKFLKPYTLEEQKNLTVCP
DGALFEQKGPVYVACQSPISLLQACRGMNDLDFGYSQRNPCILVKMNRIIGLKSEGVPRI
DCVSKNEDIPNVAVYPHNGIIDLKYFPYYGEKLHVGYLQPLVAVQVSFAPNDTGKEVTVE
CKIDGSANLKSQDDRDKFLGRVMFKITACA

>gi568815596f:60660134_60897157|GENSCAN_predicted_CDS_5|813_bp
atgaagaaggagtccctcaaccagagcctcgccgagtggaagctcttcatctacaacccg
accaccggagagttcctgtggcgcaccgccaagagctggggtttgatcttgctcttctac
ctaattttttatgggttcctggctgcactcttctcattcacgatactcaacgatgaggtt
ccaaaataccgtgaccagattcttaacccaggactgatggtttttccaaaaccagtcact
gcattggaatatgcattcagtaggtctgatctaacttcgtatgcagggtacactgaagac
cttaagaagtttctaaaaccatatactttagaagaacagaaaaacctcacagtctgtcct
gatggagcactttttgaacagaagggtccagtttatgttgcttgtcaatctcccatttcg
ttacttcaagcatgccgtggtatgaatgatcttgatttcggctattctcaaagaaaccct
tgtattcttgtgaaaatgaacagaataattggattaaagtctgaaggagtgccaaggata
gattgtgtttcgaagaatgaagatataccaaatgtagcagtttatcctcataatggaatt
atagacttaaaatatttcccatattatggggaaaaactgcatgtggggtatctacagcca
ttggttgctgttcaggtcagctttgctcctaacgatactgggaaagaagtaacagttgaa
tgcaagattgatggatcagccaaccttaaaagtcaggatgatcgtgacaagtttttggga
cgagttatgttcaaaatcacagcatgtgcatag

>gi568815596f:60660134_60897157|GENSCAN_predicted_peptide_6|434_aa
MVSFPAPGRSARAPPLNPAAHLATPARTRGLRESPAVPPPRTPSEKDEEGKRNTVLDSQR
QQKHYGITSPISLASPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEW
ISDVSESKAVEDAFVPVIKFEFDGIEMIRITNADPNVMSLKIAHVNPSDRYHLMPIITPA
YPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRVGLVESK
IRVLVGNLERNEFITLAHVNPQSFPGNKEHHKDNNYVSMWFLGIIFRRVENAESVNIDLT
YDIQSFTDTEVDSTVKTVSPPTVCTIPTVVGRNVIPRITTPHNPAQGQPHLNGMSNITKT
VTPKRSHSPSIDGTPKRLKDVEKDAIGGESMPIPTIDTSRKKRLPSKELPDSSSPVPANN
IRVIKNSIRLTLNR

>gi568815596f:60660134_60897157|GENSCAN_predicted_CDS_6|1305_bp
atggtctccttcccggctcccggccggtccgcaagggcacctcccctaaacccggcggct
cacctggccacccctgcacggactcggggactccgggagtccccagctgtcccgcctccg
aggacgccctcagaaaaggatgaggagggaaagagaaacaccgtgctggacagccagcgt
caacaaaagcattatggaattacctccccaattagtttggcatctcctaaagaaattgat
catatttacacacagaaattaattgacgccatgaaaccatttggagtgtttgaagatgag
gaagaattgaaccacaggctggtggttcttggtaaattgaacaatttagtaaaagaatgg
atttctgatgtcagcgagagtaaggctgtagaagatgcctttgtacctgttataaaattt
gaatttgatggtattgaaatgattaggatcactaatgctgatccaaatgttatgtcatta
aaaatcgcccatgtaaatccatcagataggtatcatctcatgcccataatcacccctgcc
tacccacaacagaattctacgtataatgtgtccacatcaactcgaacagtaatggtagaa
gaatttaaacaaggtcttgcagtcacagatgaaattcttcaaggaaagtcagattggtcc
aaactacttgagccaccgaatttctttcaaaagtatagggttggattagtagaatctaaa
atccgtgtacttgttggaaacttggaacggaatgaatttattactcttgcccatgtgaat
ccccagtcattcccagggaataaggaacatcataaagacaacaattacgtatcaatgtgg
ttccttgggataatttttcggagagtagaaaatgcagaaagtgtcaacatagacttgaca
tatgatatacagtcatttactgatacagaagttgactctacagtaaaaactgtatcaccc
cccactgtgtgtaccattcctaccgtagtaggacgaaatgtcattcctagaatcacaaca
cctcacaaccctgcccagggacaaccgcatctgaatggaatgtcaaatataactaagact
gttacacctaagagatcccattccccatccatagatgggactcctaagaggttgaaagac
gtagaaaaggatgccattggaggagaatctatgcctattccaactattgatacatcacgc
aaaaagagactacccagtaaagaactaccagattcatcatctccagttccagcaaacaac
atccgtgtcatcaaaaattccattcgactgacccttaatcggtaa

>gi568815596f:60660134_60897157|GENSCAN_predicted_peptide_7|101_aa
MAHAALAAPSLLQPLQHSPINFLCTNCRRGNCFLDNATRDAQNNSFDGFPRRLKDLWVVA
QENLKSPRQPKDYYKNARSSFIHNNHKLETIEMNFNKTINI

>gi568815596f:60660134_60897157|GENSCAN_predicted_CDS_7|306_bp
atggcacacgcagccctggccgcaccttccctgctgcagccgctccagcattccccaata
aactttctgtgcacaaactgccgtcgtggaaactgtttcctggataatgcaacccgtgat
gctcagaataattcattcgatggcttcccaaggaggttgaaggatctatgggtagttgcc
caagaaaacctcaagtccccaagacagccaaaagactattacaagaatgctcgcagcagc
tttattcataataaccacaaactggaaacaatcgaaatgaacttcaacaagacaatcaat
atataa

>gi568815596f:60660134_60897157|GENSCAN_predicted_peptide_8|133_aa
MLLNRNVAEERSQSQNWPANPIHLAAIKPVPVFLNPGWGALKNACAQVSLQANLITPSVD
GSRASRLCEAELGPLASASLDLKVFPEGQFGLACRYLCRPQQCTENTPSQHAHKSGSSAK
HQTPTLLPMPDAK

>gi568815596f:60660134_60897157|GENSCAN_predicted_CDS_8|402_bp
atgctgctcaacaggaatgtggcagaggaaagaagccagagccaaaactggccagccaac
ccgattcatcttgctgcaatcaaacctgtaccagtgtttctcaaccctggctggggagct
cttaaaaatgcctgtgcccaggtgtctctccaggccaatctaatcacaccctctgtggat
gggtcccgggcatccagactctgtgaagcagaactcgggcctctagcgtctgctagtcta
gatctaaaggtgtttcctgagggacagtttggcctggcatgcaggtacctctgcagacca
caacagtgcaccgaaaacaccccctcccagcacgcacacaagtctggctcctcagccaaa
catcaaacaccaacactgctgcccatgccagatgccaagtga

>gi568815596f:60660134_60897157|GENSCAN_predicted_peptide_9|101_aa
MASGAYNPYIEIIEQPRQRGMRFRYKCEGRSAGSIPGEHSTDNNRTYPSIQIMNYYGKGK
VRITLVTKNDPYKPHPHDLVGKDCRDGYYEAEFGQERRPLF

>gi568815596f:60660134_60897157|GENSCAN_predicted_CDS_9|303_bp
atggcctccggtgcgtataacccgtatatagagataattgaacaacccaggcagagggga
atgcgttttagatacaaatgtgaagggcgatcagcaggcagcattccaggggagcacagc
acagacaacaaccgaacatacccttctatccagattatgaactattatggaaaaggaaaa
gtgagaattacattagtaacaaagaatgacccatataaacctcatcctcatgatttagtt
ggaaaagactgcagagacggctactatgaagcagaatttggacaagaacgcagacctttg
ttn