GENSCAN 1.0	Date run:  3-Nov-116	Time: 18:15:45

Sequence gi568815580f:63384429_63593221 : 208793 bp : 40.07% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.10 PlyA -    577    572    6                               1.05
 1.09 Term -   9121   8975  147  1  0   61   44   175 0.883   7.32
 1.08 Intr -  12825  12606  220  2  1   72  115   170 0.979  15.48
 1.07 Intr -  14895  14814   82  1  1   76   97    72 0.947   4.68
 1.06 Intr -  19398  19279  120  1  0   84   61   107 0.952   7.15
 1.05 Intr -  23071  23004   68  0  2   56    4    77 0.320  -6.27
 1.04 Intr -  26018  25862  157  0  1   69   71   128 0.759   7.35
 1.03 Intr -  27150  27039  112  0  1   75   54   111 0.873   5.43
 1.02 Intr -  31302  31188  115  2  1   36   23   170 0.527   4.83
 1.01 Init -  31593  31478  116  0  2   45   21   124 0.347   1.13
 1.00 Prom -  36177  36138   40                              -6.55

 2.00 Prom +  36830  36869   40                              -9.55
 2.01 Init +  37798  37908  111  0  0   45   44    96 0.762   1.18
 2.02 Intr +  38398  38543  146  0  2  102   77   100 0.876   8.46
 2.03 Term +  39367  39475  109  1  1  111   45    65 0.887   1.50
 2.04 PlyA +  40553  40558    6                               1.05

 3.06 PlyA -  40713  40708    6                               1.05
 3.05 Term -  47102  46996  107  0  2   73   48   107 0.960   2.79
 3.04 Intr -  51320  51152  169  2  1  -81   87   203 0.044   1.90
 3.03 Intr -  56127  55777  351  0  0   56   13   184 0.006   2.29
 3.02 Intr -  62182  61983  200  2  2   65  100   112 0.627   8.25
 3.01 Init -  71617  71575   43  1  1   62   81    37 0.196   1.03
 3.00 Prom -  71772  71733   40                              -5.55

 4.00 Prom +  72183  72222   40                              -4.95
 4.01 Init +  80816  80872   57  1  0   74   72    49 0.317   3.30
 4.02 Intr +  83325  83514  190  2  1   18   41   208 0.027   7.34
 4.03 Intr +  92554  92617   64  2  1   57  115    65 0.001   2.96
 4.04 Intr +  99994 100168  175  1  1  112  115   123 0.084  16.42
 4.05 Intr + 102518 102655  138  1  0   94   98   152 0.999  16.54
 4.06 Intr + 104919 105000   82  2  1   91   77   119 0.966   9.39
 4.07 Intr + 105822 105947  126  1  0   54  117   104 0.965   9.63
 4.08 Intr + 108525 108667  143  1  2   65   95   170 0.964  14.55
 4.09 Intr + 111493 111544   52  0  1  101  107    10 0.961   1.76
 4.10 Term + 112656 112972  317  1  2   72   48   213 0.920   9.82
 4.11 PlyA + 113217 113222    6                               1.05

 5.00 Prom + 114493 114532   40                              -7.65
 5.01 Init + 114722 114859  138  1  0   89  116    83 0.562  11.39
 5.02 Term + 118902 119294  393  2  0  115   42   303 0.996  22.45
 5.03 PlyA + 119384 119389    6                               1.05

 6.00 Prom + 120507 120546   40                              -5.05
 6.01 Init + 126769 127060  292  0  1   67   38   138 0.198   4.06
 6.02 Intr + 134197 134270   74  2  2   96   66    47 0.076   1.51
 6.03 Intr + 134636 134756  121  1  1   29  110   114 0.085   6.85
 6.04 Term + 138949 139097  149  2  2   23   42   152 0.785   1.18
 6.05 PlyA + 139120 139125    6                               1.05

 7.00 Prom + 145091 145130   40                              -5.55
 7.01 Init + 165261 165344   84  2  0   36   91    88 0.851   4.77
 7.02 Intr + 171714 171899  186  2  0   99   94   105 0.961  11.16
 7.03 Intr + 173924 174058  135  1  0   68   66   135 0.993   9.14
 7.04 Intr + 175150 175290  141  0  0  102  109   114 0.999  14.53
 7.05 Intr + 176657 176774  118  1  1   34  116    40 0.697   0.52
 7.06 Intr + 179550 179692  143  1  2   76   14   134 0.587   3.95
 7.07 Intr + 181017 181184  168  2  0   85   84   163 0.998  14.82
 7.08 Intr + 182179 182474  296  0  2  111   38   280 0.711  20.18
 7.09 Intr + 184271 184319   49  2  1  105   66    40 0.266   1.26
 7.10 Term + 196561 196734  174  0  0   22   44   213 0.487   7.08
 7.11 PlyA + 198094 198099    6                               1.05

 8.00 Prom + 198196 198235   40                              -4.05
 8.01 Init + 203829 204108  280  2  1   64    6   188 0.650   5.47
 8.02 Intr + 204223 204404  182  2  2  114   31   206 0.995  16.17
 8.03 Intr + 205228 205287   60  0  0  104   83    60 0.550   5.11
 8.04 Intr + 207920 208048  129  1  0   48  108    79 0.981   5.87
 8.05 Intr + 208426 208554  129  0  0   86   55    98 0.737   6.27

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Intr -  51322  51152  171  2  0  -41   87   202 0.908   6.19
S.002 Intr -  56127  55821  307  0  1   56   52   170 0.908   5.30
S.003 Term -  86488  86352  137  2  2   75   49   119 0.870   3.90
S.004 Init +  95454  95576  123  2  0   80   64   110 0.906   8.02
S.005 Term +  96427  96576  150  0  0   70   39   118 0.890   2.03
S.006 Sngl -  99376  99143  234  1  0   62   46   213 0.862   9.35
S.007 Init + 100001 100168  168  1  0   86  115    95 0.916  11.58


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815580f:63384429_63593221|GENSCAN_predicted_peptide_1|378_aa
MIGGLDKQIKDITEVIEQPVKHSKLFEALGITQPRVVLLSISSSQLEGGSGGDSEVLHIV
LELLNQLDSFEAPKKIKKAIDLASKAAQEDKAGNYEEALQLYQHAVQYFLHVVKYEAQGD
KAKQSIRAKCTEYLDRAEKLKEYLKNKEKKAQKPVKEGQPSPADEKGNDSDGEGESDDPE
KKKLQNQLQGAIVIERPNVKWSDVAGLEGAKEALKEAVILPIKFPHLFTGVGVDNDGILV
LGATNIPWVLDSAIRRRFEKRIYIPLPEPHARAAMFKLHLGTTQNSLTEADFRELGRKTD
GYSGADISIIVRDALMQPVRKVQSATHFKKVRGPSRADPNHLVDDLLTPCSPGDPGAIEM
TWMDVPGDKLLEPVVSMV

>gi568815580f:63384429_63593221|GENSCAN_predicted_CDS_1|1137_bp
atgattggtggactggacaagcagattaaggacatcacagaagtgatcgagcagcctgtt
aagcattccaagctctttgaagcactgggtatcacacaacccagggtggtactgctctcc
atcagctcctcgcagctggaggggggttctggaggggacagtgaagtgctgcacatcgtg
ctggaactgctcaaccaactggacagctttgaggcccccaagaagatcaagaaagcgata
gatctggctagcaaagcagcgcaagaagacaaggctgggaactacgaagaagcccttcag
ctctatcagcatgctgtgcagtattttcttcatgtcgttaaatatgaagcacagggtgat
aaagccaagcaaagtatcagggcaaagtgtacagaatatcttgatagagcagaaaaacta
aaggagtacctgaaaaataaagagaaaaaagcacagaagccagtgaaagaaggacagccg
agtccagcagatgagaaggggaatgacagtgatggggaaggagaatctgatgatcctgaa
aaaaagaaactacagaatcaacttcaaggtgccattgttatagaacgaccaaatgtgaaa
tggagtgacgttgctggacttgaaggagccaaagaagcactgaaagaggctgtgatactg
cctattaaatttcctcatctttttacaggggttggtgtagacaatgatggaattttggtt
ctgggagctacaaatataccctgggttctggattctgccattaggcgaagatttgagaaa
cgaatttatattcccttgccggaaccccatgcccgagcagcaatgtttaaactgcaccta
gggaccactcagaacagtctcacggaagcagactttcgggaacttgggaggaaaacagat
ggttattcaggggcagatataagtatcattgtacgtgatgcccttatgcagcctgttagg
aaagtacagtcagctactcattttaaaaaggttcgcggaccttcccgagctgatcctaac
catcttgtagatgatctgctaacaccttgctctccaggtgaccctggtgccattgaaatg
acatggatggatgtccctggagataaacttttggagccagttgtttccatggtttga

>gi568815580f:63384429_63593221|GENSCAN_predicted_peptide_2|121_aa
MIPGGWAKWMTWRSSQAVPKGTRGEESQQQQRRSAHGLLSEKVVHFQDPPTGGFGPVTAP
SLRVLCGMGAITVLVSVVNNSGGSARIVLPNLYHPGSKHRALSLPCIYPSFLPTCEFAFA
K

>gi568815580f:63384429_63593221|GENSCAN_predicted_CDS_2|366_bp
atgatacctggaggttgggcgaagtggatgacatggcggagttcccaggcggttcccaag
ggaacgaggggcgaggagagccaacagcagcaacgtcgaagcgcgcacgggcttttgagt
gaaaaagtcgtccatttccaagacccgccgactgggggctttgggcctgtgactgcgcct
tcactccgtgtcctctgtggaatgggggcgatcaccgtcctcgtctcggtggtgaataat
tcaggagggagtgcgcgaatagtattgccaaatctgtatcatccaggctcgaagcacaga
gccctctctctgccctgcatctacccgtcctttcttcccacttgtgaatttgccttcgca
aaatga

>gi568815580f:63384429_63593221|GENSCAN_predicted_peptide_3|289_aa
MEYYSATKTNEVPTVYRCRWTFPRQQETYSFINTYPMAREHKALSGQLQAGRPQGSMLIG
QTLVTCPSPDQLVLSKSVTNETPRERERKASQKCDQQSEGVSVFLGPGQSRPVRDDWTCA
AEGYSHPESPVLPELGAEMQSSPAKRHSPTQQTGTWPPKPELCSYFTATISINITADLEA
VNVCKLWIHNVNPPSRVLEPEKKDGEKHQAEEQLYSIGRISLTWSLSELTRLHGEALGIK
CQNSLQDLSERPYKDLRVDLVTAILALQILPIQKTTGMSYSGEEALSGQ

>gi568815580f:63384429_63593221|GENSCAN_predicted_CDS_3|870_bp
atggagtattactcagccacaaaaacaaatgaagtaccgacagtctaccgctgcaggtgg
actttccccaggcaacaggagacctacagcttcatcaacacctaccccatggccagagag
cacaaagctctatccggccagctccaggcaggcagacctcaaggcagcatgctgattggc
caaactctggtcacatgtccatctccagaccaattagtattgtccaagtctgttaccaat
gaaaccccaagggaaagggaaagaaaagcaagccaaaagtgtgaccagcagtccgaagga
gtgtcagtgttcctgggcccaggccaaagcaggcctgtcagggatgactggacatgtgct
gctgagggttacagccatcctgagagcccagtcttgccagagttgggagcagaaatgcag
tccagcccagcaaagagacacagcccaacccagcaaacaggaacttggcccccaaagcca
gagctgtgctcatatttcactgccacaatctccatcaatataactgctgatctggaagct
gtgaatgtttgtaagctctggatacataatgtcaatccaccttccagagttctggagccc
gaaaagaaggatggagaaaaacaccaagcagaggagcagctttactcaatcggtagaata
tccctaacttggagcctatcagagctgacccgactacatggagaagccttgggcattaag
tgtcagaattcactgcaagatctgagtgagagaccttacaaagatctgcgtgttgattta
gtgacagcaatcttggcactccaaattttgccaatccaaaagacaactggaatgagttac
tctggagaagaggcactcagtggacaataa

>gi568815580f:63384429_63593221|GENSCAN_predicted_peptide_4|447_aa
MRDSRKASTMDTSHALLRGPDQLQTRGELSIEVLNKWDQDPEAFFEELLQEVQHGFTSMT
LNAKHHHSNGYQETEVGQRKWTGLCAPRLPVPFPRIFQDNCDSRPAMDALQLANSAFAVD
LFKQLCEKEPLGNVLFSPICLSTSLSLAQVGAKGDTANEIGQVLHFENVKDVPFGFQTVT
SDVNKLSSFYSLKLIKRLYVDKSLNLSTEFISSTKRPYAKELETVDFKDKLEETKAPHAG
RSSDSPGVQEAPRFFLRLSASPRRLPRRTPRPSLKIAGHFENILADNSVNDQTKILVVNA
AYFVGKWMKKFSESETKECPFRVNKNFLSDITKPFLMPRGVSAQSIHLNSLPTAAPHFRC
GQTGVLDQVVSWDIDTAAKFIGAEADTVGVVGSGASIGIAFGSLIIGYSRNPSLKQQLFS
YAILGFALSEAMGLFCLMVAFLILFAM

>gi568815580f:63384429_63593221|GENSCAN_predicted_CDS_4|1344_bp
atgagggactccaggaaggcatctaccatggacaccagtcatgctctcctcagggggcca
gatcagctgcagacaagaggagagctttcaattgaagttttaaacaagtgggatcaagat
cctgaagcattctttgaagaactgttacaggaagtgcaacatggctttaccagtatgacc
ctgaatgcaaagcaccatcacagcaatggctaccaagagacagaagtgggccagcgaaag
tggactggtctttgtgctcctcgcttgcctgttccttttccacgcattttccaggataac
tgtgactccaggcccgcaatggatgccctgcaactagcaaattcggcttttgccgttgat
ctgttcaaacaactatgtgaaaaggagccactgggcaatgtcctcttctctccaatctgt
ctctccacctctctgtcacttgctcaagtgggtgctaaaggtgacactgcaaatgaaatt
ggacaggttcttcattttgaaaatgtcaaagatgtaccctttggatttcaaacagtaaca
tcggatgtaaacaaacttagttccttttactcactgaaactaatcaagcggctctacgta
gacaaatctctgaatctttctacagagttcatcagctctacgaagagaccgtatgcaaag
gaattggaaactgttgacttcaaagataaattggaagaaacgaaagctccccatgctggt
cgttcctctgatagccccggggtccaagaagctcctaggttctttctccggctcagtgct
tcccccaggcgtctccctcgtcggactcctcgtccctcccttaaaattgccggccacttt
gagaacattttagctgacaacagtgtgaacgaccagaccaaaatccttgtggttaatgct
gcctactttgttggcaagtggatgaagaaattttctgaatcagaaacaaaagaatgtcct
ttcagagtcaacaagaactttttgagtgacattactaaaccttttcttatgccccgtggt
gtctccgcccagagcattcatctaaacagccttcctacagcagctccccactttaggtgt
ggccagacaggagttctagaccaggttgtctcctgggacattgacaccgcagccaagttt
attggtgctgaggcagacacagttggtgtggttggttcaggggctagcattggaatagcg
tttggcagcttgatcattggttattccaggaacccatctctcaagcagcagctcttctcc
tatgcgattctgggctttgccctgtctgaggccatggggctcttctgtttgatggtcgcc
ttccttatcctcttcgccatgtga

>gi568815580f:63384429_63593221|GENSCAN_predicted_peptide_5|176_aa
MEATFCMGNIDSINCKIIELPFQNKHLSMFILLPKDVEDESTGLEKIEKQLNSESLSQWT
NPSTMANAKVKLSIPKFKVEKMIDPKACLENLGLKHIFSEDTSDFSGMSETKGVALSNVI
HKVCLEITEDGGDSIEVPGARILQHKDELNADHPFIYIIRHNKTRNIIFFGKFCSP

>gi568815580f:63384429_63593221|GENSCAN_predicted_CDS_5|531_bp
atggaggccacgttctgtatgggaaacattgacagtatcaattgtaagatcatagagctt
ccttttcaaaataagcatctcagcatgttcatcctactacccaaggatgtggaggatgag
tccacaggcttggagaagattgaaaaacaactcaactcagagtcactgtcacagtggact
aatcccagcaccatggccaatgccaaggtcaaactctccattccaaaatttaaggtggaa
aagatgattgatcccaaggcttgtctggaaaatctagggctgaaacatatcttcagtgaa
gacacatctgatttctctggaatgtcagagaccaagggagtggccctatcaaatgttatc
cacaaagtgtgcttagaaataactgaagatggtggggattccatagaggtgccaggagca
cggatcctgcagcacaaggatgaattgaatgctgaccatccctttatttacatcatcagg
cacaacaaaactcgaaacattattttctttggcaaattctgttctccttaa

>gi568815580f:63384429_63593221|GENSCAN_predicted_peptide_6|211_aa
MSEGRWYQLIYCKEQSDSRDDMLRPDWSQPGVQKESLPSLVPSFLREDAWIKGAGCLRTK
AWVLERWTLVHSTQINKPSFLCQELLSIAKFSQPLEGDGAVRHIITVLLRAWNGQLLQLF
FKFRVGTLKYEAHRVWWYWVLVSRSKQGTAQKHFYPYEHPSTGQLLKGKETNLLQRDCFR
IWEACLDNLEVKPDEKVLEFSQAQEESVPKL

>gi568815580f:63384429_63593221|GENSCAN_predicted_CDS_6|636_bp
atgagtgaggggcgctggtatcagctgatttattgcaaggagcagtctgatagccgtgat
gacatgctgagacctgactggagtcaacctggggtccaaaaggagtcgttgccatctcta
gttccatctttccttagggaggatgcctggataaagggagctggatgcctaagaaccaaa
gcctgggtactggagagatggacacttgtgcacagcacccaaataaacaagccttctttc
ctttgtcaagagctgctgtcgatagctaaatttagtcagccgctagagggagatggcgct
gtccgtcacattataacagtgctgctcagggcctggaacggtcagttgctacagcttttc
tttaagttcagggtggggacactgaaatacgaggctcatagagtctggtggtactgggtc
ttggtgagtaggagcaagcaaggcactgcccaaaagcacttctacccgtatgagcatccg
tccacaggccaattactaaaaggtaaagaaacaaacctccttcagcgtgattgcttccgc
atatgggaagcttgtttagataatctggaagtcaaacctgatgaaaaggtgcttgaattc
agtcaagcacaggaagagtctgtgcccaagttatga

>gi568815580f:63384429_63593221|GENSCAN_predicted_peptide_7|497_aa
MCLPEREFTAVLRWTLSARRSFLQPVVLIVISFTMDSLVTANTKFCFDLFQEIGKDDRHK
NIFFSPLSLSAALGMVRLGARSDSAHQIDEVLHFNEFSQNESKEPDPCLKSNKQKVLADS
SLEGQKKTTEPLDQQAGSLNNESGLVSCYFGQLLSKLDRIKTDYTLSIANRLYGEQEFPI
CQEYLDGVIQFYHTTIESVDFQKNPEKSRQEINFWVECQSQGKIKELFSKDAINAETVLV
LVNAVYFKAKWETYFDHENTVDAPFCLNANENKSVKMMTQKGLYRIGFIEEVKAQILEMR
YTKGKLSMFVLLPSHSKDNLKGLEELERKITYEKMVAWSSSENMSEESVVLSFPRFTLED
SYDLNSILQDMGITDIFDETRADLTGISPSPNLYLSKIIHKTFVEVDENGTQAAAATGAV
VSESCHQSFSVATQFFCRRQPLNDYTQYSMESIANAVEENPSRKNTLEMWKDYTTEDAII
VIEKAMTAVKPETINSC

>gi568815580f:63384429_63593221|GENSCAN_predicted_CDS_7|1494_bp
atgtgccttccagagagggagttcacggccgtcctgagatggactctcagtgctaggagg
tcctttctacaaccagtggtcttgatcgttataagttttacaatggactctcttgttaca
gcaaacaccaaattttgctttgatctttttcaagagataggcaaagatgatcgtcataaa
aacatatttttctctcccctgagcctctcagctgcccttggtatggtacgcttgggtgct
agaagtgacagtgcacatcagattgatgaggtactacacttcaacgaattttcccagaat
gaaagcaaagaacctgacccttgtctgaaaagcaacaaacaaaaagtgctggctgacagc
tctctggaggggcagaaaaaaacgacagagcctctggatcagcaggctgggtccttaaac
aatgagagcggactggtcagctgctactttgggcagcttctctccaaattagacaggatc
aagactgattacacactgagtattgccaacaggctttatggagagcaggaattcccaatc
tgtcaggaatacttagatggtgtgattcaattttaccacacgacgattgaaagtgttgat
ttccaaaaaaaccctgaaaaatccagacaagagattaacttctgggttgaatgtcaatcc
caaggtaaaatcaaggaactcttcagcaaggacgctattaatgctgagactgtgctggta
ctggtgaatgctgtttacttcaaggccaaatgggaaacatactttgaccatgaaaacacg
gtggatgcacctttctgtctaaatgcgaatgaaaacaagagtgtgaagatgatgacgcaa
aaaggcctctacagaattggcttcatagaggaggtgaaggcacagatcctggaaatgagg
tacaccaaggggaagctcagcatgttcgtgctgctgccatctcactctaaagataacctg
aagggtctggaagagcttgaaaggaaaatcacctatgaaaaaatggtggcctggagcagc
tcagaaaacatgtcagaagaatcggtggtcctgtccttcccccggttcaccctggaagac
agctatgatctcaattccattttacaagacatgggcattacggatatctttgatgaaacg
agggctgatcttactggaatctctccaagtcccaatttgtacttgtcaaaaattatccac
aaaacctttgtggaggtggatgaaaacggtacccaggcagctgcagccactggggctgtt
gtctcggaaagctgccaccagtcgttcagtgtggccacgcagtttttttgcagaaggcag
cctctaaatgattacacacagtactccatggaaagtattgccaacgctgtagaagagaac
cccagtagaaagaacactctggaaatgtggaaggattataccactgaagatgccatcatt
gttatagaaaaagccatgacagctgtcaagcctgaaacaataaattcctgctag

>gi568815580f:63384429_63593221|GENSCAN_predicted_peptide_8|260_aa
MGPTSGQTGVAWTRAGSTWGSFHEEEAVERQRQAGSDREQENKAIKTLTLLRGEIRTEHH
RMTEDSSRLMDVSQQEKAKRGREKQAAATFHQKGLAKIIMDSLGAVSTRLGFDLFKELKK
TNDGNIFFSPVGILTAIGMVLLGTRGATASQLEEVFHSEKETKSSRIKAEEKEVIENTEA
VHQQFQKFLTEISKLTNDYELNITNRLFGEKTYLFLQKYLDYVEKYYHASLEPVDFVNAA
DESRKKINSWVESKTNGRVW

>gi568815580f:63384429_63593221|GENSCAN_predicted_CDS_8|780_bp
atgggccccacatctggacaaactggtgtcgcctggacaagggctgggtctacctgggga
agcttccatgaagaggaggctgtggagaggcagagacaggcagggtcagacagagagcaa
gagaataaagccattaaaacattaaccctgctccgcggggaaataagaactgagcaccac
cggatgacggaagactccagtagattgatggatgtctcccagcaagagaaggccaagaga
ggacgtgagaagcaggcagcagcgacctttcaccaaaagggtctcgctaaaatcatcatg
gattcacttggcgccgtcagcactcgacttgggtttgatcttttcaaagagctgaagaaa
acaaatgatggcaacatcttcttttcccctgtgggcatcttgactgcaattggcatggtc
ctcctggggacccgaggagccaccgcttcccagttggaggaggtgtttcactctgaaaaa
gagacgaagagctcaagaataaaggctgaagaaaaagaggtgattgagaacacagaagca
gtacatcaacaattccaaaagtttttgactgaaataagcaaactcactaatgattatgaa
ctgaacataaccaacaggctgtttggagaaaaaacatacctcttccttcaaaaatactta
gattatgttgaaaaatattatcatgcatctctggaacctgttgattttgtaaatgcagcc
gatgaaagtcgaaagaagattaattcctgggttgaaagcaaaacaaatggtagagtatgg