GENSCAN 1.0	Date run:  7-Nov-116	Time: 17:06:54

Sequence gi568815574r:1090900_1312634 : 221735 bp : 48.39% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   9037   9288  252  0  0   80   34   519 0.800  43.04
 1.02 Intr +   9298   9710  413  0  2 -217   47   746 0.593  32.98
 1.03 Term +  21783  21891  109  0  1  -16   44   144 0.164  -2.42
 1.04 PlyA +  23402  23407    6                               1.05

 2.06 PlyA -  26129  26124    6                               1.05
 2.05 Term -  30705  30557  149  1  2   78   38    67 0.319  -1.24
 2.04 Intr -  33967  33884   84  2  0   70  111    49 0.641   5.19
 2.03 Intr -  36521  36384  138  0  0  110   30   110 0.580   7.84
 2.02 Intr -  57199  56975  225  2  0   55  101    97 0.117   5.66
 2.01 Init -  65357  65288   70  2  1   64   78    39 0.113  -0.29
 2.00 Prom -  68244  68205   40                              -4.66

 3.00 Prom +  70605  70644   40                              -5.06
 3.01 Init +  81684  81761   78  2  0   83   52   104 0.403   7.36
 3.02 Intr +  81839  81992  154  1  1   38   65   228 0.660  15.15
 3.03 Term +  83899  84080  182  2  2    6   43   285 0.095  13.57
 3.04 PlyA +  84795  84800    6                               1.05

 4.08 PlyA -  85349  85344    6                               1.05
 4.07 Term - 100261  99998  264  1  0   52   45   300 0.997  17.61
 4.06 Intr - 102403 102319   85  0  1  121   68    74 0.950   8.52
 4.05 Intr - 107825 107614  212  2  2   66    7   145 0.127   1.91
 4.04 Intr - 111636 111503  134  1  2   80   99   198 0.972  20.46
 4.03 Intr - 115700 115534  167  1  2   73  103   110 0.994  10.60
 4.02 Intr - 118006 117907  100  2  1   69  111   119 0.558  11.47
 4.01 Init - 121735 121657   79  1  1   80   91   154 0.999  14.12
 4.00 Prom - 135059 135020   40                              -4.06

 5.02 PlyA - 136822 136817    6                               1.05
 5.01 Sngl - 173918 172791 1128  2  0   35   40   638 0.588  50.33
 5.00 Prom - 175023 174984   40                              -2.46

 6.05 PlyA - 179046 179041    6                               1.05
 6.04 Term - 183171 183072  100  2  1  117   55    28 0.492  -0.00
 6.03 Intr - 189873 189680  194  0  2   -8 -110   318 0.575   0.69
 6.02 Intr - 190190 189922  269  0  2 -297   68   640 0.724  20.75
 6.01 Init - 192172 192115   58  1  1   98   55    46 0.740   3.77
 6.00 Prom - 193191 193152   40                              -8.36

 7.00 Prom + 193199 193238   40                             -10.25
 7.01 Init + 194935 195021   87  0  0   71   76    37 0.571   1.44
 7.02 Intr + 197620 197743  124  0  1   73  115    64 0.999   7.76
 7.03 Intr + 197860 197989  130  2  1   83  106    10 0.918   2.05
 7.04 Intr + 199438 199610  173  1  2  102   66    22 0.641   0.99
 7.05 Intr + 203429 203562  134  0  2   89   71   161 0.798  14.86
 7.06 Intr + 204528 204557   30  2  0  107  119    -9 0.662   2.43
 7.07 Intr + 205404 206816 1413  2  0   12  -18   545 0.172  25.88
 7.08 Intr + 209592 209727  136  2  1   83   99    77 0.886   8.44
 7.09 Intr + 213024 213120   97  1  1   76   86   114 0.806   9.07
 7.10 Intr + 214547 214628   82  2  1  128   80    87 0.954  11.54
 7.11 Intr + 217945 218052  108  0  0   62   61    86 0.900   3.78
 7.12 Term + 218503 218580   78  0  0   90   53   101 0.988   4.56
 7.13 PlyA + 219004 219009    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815574r:1090900_1312634|GENSCAN_predicted_peptide_1|257_aa
MEEEEEKMEEKEEMAKEEMVEMEEEIEEKEEMVEIEEEEKMEEEQMEEMEREEEMEMEEE
ELEEEQTEEMEMDKEEREEEEMEEMEEEEEEMQEIEEEEEELEEEQMEKEETEEIEMEEM
VAEEEEMEEEEEEMQEIEEEQEEMEEEETKEVEMEEIEEEEMEEEQKEEEETEGIEMEEM
EEEMEEEEEEMQEIEEEEEEMEEEEMEESGEIFLLETVLSFGKSYGFCKSGRSHRQKHPI
RKNKATPPTSTSSELAV

>gi568815574r:1090900_1312634|GENSCAN_predicted_CDS_1|774_bp
atggaggaggaggaggagaagatggaggagaaggaggagatggcaaaggaggagatggtg
gagatggaggaggagatagaggagaaggaggagatggtagagatagaggaggaggagaag
atggaggaggagcagatggaggaaatggagagggaggaggagatggagatggaggaggag
gagctggaggaagagcagacagaggagatggagatggacaaggaggagagggaggaggag
gagatggaggagatggaagaggaggaggaagagatgcaggagatagaggaggaggaggag
gagctggaggaagagcagatggagaaagaggagacagaggagatagagatggaagagatg
gtggcggaggaggaggagatggaagaggaggaggaagagatgcaggagatagaggaagag
caggaggagatggaggaggaggagacaaaggaggtagagatggaggagatagaggaggag
gagatggaggaagagcagaaggaggaagaggagacagaggggatagagatggaggagatg
gaggaggagatggaagaggaggaggaagagatgcaggagatagaggaggaggaggaggag
atggaggaagaggagatggaggagagtggggagattttcctgctcgaaacagtgctcagc
tttggcaaatcctatggattttgcaaaagtgggcgctcacatcggcagaagcatccgatt
cggaaaaataaggcgacccctcctacaagcacctcctccgaactggccgtctag

>gi568815574r:1090900_1312634|GENSCAN_predicted_peptide_2|221_aa
MGWTWRLTSVIPALWEAEAGGSREASSVSFRPHEASCSETQPPLPTGGREEEERARHERE
GPLGKAVFAALVKISPWCLSSAVRKLTGLWNVGGSVVAVTSAPPPACGCTFTYAYTCIDT
STFIFTSTYIYTCTCTCTCTCVCTGLNKCNHNELMMNAKSKQQFRVCVFITVGRPSFFWG
PLSQALYRPATNLPDTSPVLFAAGPECSWNFSMTQLRTELD

>gi568815574r:1090900_1312634|GENSCAN_predicted_CDS_2|666_bp
atgggctggacgtggaggctcacatctgtcatcccagcactttgggaggccgaggcggga
ggatcacgagaagcatcttctgtgtctttccgcccccatgaagccagttgctcagaaacg
cagccgccgctgcccacaggagggagggaagaggaggaacgggctcgacatgaaagagaa
ggcccgttgggaaaggctgtttttgcagcactggtgaagataagcccctggtgtttgagt
tccgctgtgagaaagctgaccgggctttggaacgtgggaggaagtgtggtggcagtgaca
tctgcacctccgcctgcctgtggctgtacttttacgtatgcctatacctgtatcgacacc
tccacctttatctttaccagcacctacatctatacctgtacctgtacctgtacctgtacc
tgtgtctgcactggtttaaataaatgtaaccacaacgaactcatgatgaacgcaaagtca
aaacagcagtttcgggtgtgtgtgttcatcacggtcggcagaccttccttcttctggggt
cctttatcccaagccctttatagacctgcaaccaacttgcccgacacttcacctgtttta
ttcgcagcaggtcctgaatgcagctggaatttcagcatgactcagctccgaacggaactc
gactga

>gi568815574r:1090900_1312634|GENSCAN_predicted_peptide_3|137_aa
MAGEKVEKADTKEKKPEAKKADAGGERNWQAIPISPVYSGKAVYKRKYSATKSNVEKKKK
EKVLATVTQPVGGDKDGVPPRRTHQKFVIATSTKIGISNVKIPKHLTDAYFKKQQLQKPR
HQEGAIVDTEKEKYEIM

>gi568815574r:1090900_1312634|GENSCAN_predicted_CDS_3|414_bp
atggcaggtgaaaaagttgagaaggcagatactaaagagaagaaacctgaagccaagaag
gctgatgctggtggcgagaggaattggcaggcaatccctatatctcccgtgtattccggg
aaggccgtgtacaagaggaagtactcagccactaaatccaacgttgaaaagaaaaagaag
gagaaggttcttgcgaccgttacacaaccagttggcggtgacaaggacggagtccctcca
cgaagaacgcaccagaaatttgtcattgccacctcaaccaaaatcggtatcagcaatgta
aaaatcccaaaacatcttactgatgcttacttcaagaagcagcagctgcagaagcccaga
caccaggaaggtgccatcgtcgacacagaaaaagagaaatatgagattatgtag

>gi568815574r:1090900_1312634|GENSCAN_predicted_peptide_4|346_aa
MGRLVLLWGAAVFLLGGWMALGQGGAEGVQIQIIYFNLETVQVTWNASKYSRTNLTFHYR
FNGDEAYDQCTNYLLQEGHTSGCLLDAEQRDDILYFSIRNGTHPVFTASRWMVYYLKPSS
PKHVRFSWHQDAVTVTCSDLSYGDLLYEVQYRSPFDTEWQSKQENTCNVTIEGLDAEKCY
SFWVRVKAMEDVYGPDTYPSDWSEVTCWQRGEIRGNACYAAVSHSLVTRLEVKKFLIPSV
PDPKSIFPGLFEIHQGNFQEWITDTQNVAHLHKMAGAEQESGPEEPLVVQLAKTEAESPR
MLDPQTEEKEASGGSLQLPHQPLQGGDVVTIGGFTFVMNDRSYVAL

>gi568815574r:1090900_1312634|GENSCAN_predicted_CDS_4|1041_bp
atggggcggctggttctgctgtggggagctgccgtctttctgctgggaggctggatggct
ttggggcaaggaggagcagaaggagtacagattcagatcatctacttcaatttagaaacc
gtgcaggtgacatggaatgccagcaaatactccaggaccaacctgactttccactacaga
ttcaacggtgatgaggcctatgaccagtgcaccaactaccttctccaggaaggtcacact
tcggggtgcctcctagacgcagagcagcgagacgacattctctatttctccatcaggaat
gggacgcaccccgttttcaccgcaagtcgctggatggtttattacctgaaacccagttcc
ccgaagcacgtgagattttcgtggcatcaggatgcagtgacggtgacgtgttctgacctg
tcctacggggatctcctctatgaggttcagtaccggagccccttcgacaccgagtggcag
tccaaacaggaaaatacctgcaacgtcaccatagaaggcttggatgccgagaagtgttac
tctttctgggtcagggtgaaggctatggaggatgtatatgggccagacacatacccaagc
gactggtcagaggtgacatgctggcagagaggcgagattcggggtaatgcttgttacgcg
gcagtgtcccatagccttgtcaccaggctggaagtgaagaagtttctcattcccagcgtg
ccagacccgaaatccatcttccccgggctctttgagatacaccaagggaacttccaggag
tggatcacagacacccagaacgtggcccacctccacaagatggcaggtgcagagcaagaa
agtggccccgaggagcccctggtagtccagttggccaagactgaagccgagtctcccagg
atgctggacccacagaccgaggagaaagaggcctctgggggatccctccagcttccccac
cagcccctccaaggcggtgatgtggtcacaatcgggggcttcacctttgtgatgaatgac
cgctcctacgtggcgttgtga

>gi568815574r:1090900_1312634|GENSCAN_predicted_peptide_5|375_aa
MAHTLFLTFTIHVEKFVFPRAKSDDSPRLLEVGTIMGLFVFNESCPVVDINVKKFIFPRI
QPDGSARLLELGIMVDLFVKGSYLLVDIDVEKFIFPRAQPDGSARLLELGIMVDLFVKGS
YLLVDIDVEKFIFPRAQPDGSARLLELGIMVDLFVKGSYLLVDIDVEKFIFPRAQPDGSA
RLLELGITVDLFVKGSYLLVDIDVEKLIFPRAQPDGSARLLELGITVDLFVKGSYLLVDI
DVEKFIFPRAQPDGSPRLLELGIMVDLFVKGSYLLVDIDVEKFIFPRAQPDGSPRLLELG
IMVDILVKGSYLPFDIDVEKFIFPRAQPDGSPRLLELALLYYFLSMAHTLFLSFTINVEN
FKFPSSTRWHTRCTP

>gi568815574r:1090900_1312634|GENSCAN_predicted_CDS_5|1128_bp
atggctcataccctgtttctgactttcaccattcatgtagagaagtttgtctttccaaga
gccaaatcagatgactcaccaaggctgctggaagtgggcacaataatgggcctttttgtc
tttaatgaatcatgccctgttgttgacatcaatgtaaagaagtttatcttcccaagaatt
caaccagatggctcagccaggctgctggaactgggcatcatggtggatctttttgtcaaa
ggctcatatcttcttgttgacattgatgtagagaagtttatcttcccaagagctcaacca
gatggctcagccaggctgctggaactgggcatcatggtggatctttttgtcaaaggctca
tatcttcttgttgacattgatgtagagaagtttatcttcccaagagctcaaccagatggc
tcagccaggctgctggaactgggcatcatggtggatctttttgtcaaaggctcatatctt
cttgttgacattgatgtagagaagtttatcttcccaagagctcaaccagatggctcagcc
aggctgctggaactgggcatcacggtggatctttttgtcaaaggctcatatcttcttgtt
gacattgatgtagagaagcttatcttcccaagagctcaaccagatggctcagccaggctg
ctggaactgggcatcacggtggatctttttgtcaaaggctcatatcttcttgttgacatt
gatgtagagaagtttatcttcccaagagctcaaccagatggctcacccaggctgctggaa
ctgggcatcatggtggatctttttgtcaaaggctcatatcttcttgttgacattgatgta
gagaagtttatcttcccaagagctcaaccagatggctcacccaggctgctggaactgggc
atcatggtggatattcttgtcaaaggctcatatcttccttttgacattgatgtagagaag
tttatcttcccaagagctcaaccagacggttcaccaaggctgctggaactggcactgtta
tactacttcttgtcaatggctcacaccttgtttctgagtttcaccatcaatgtggagaac
tttaaattcccgagttcaaccagatggcacaccagatgcacaccgtga

>gi568815574r:1090900_1312634|GENSCAN_predicted_peptide_6|206_aa
MGPHPGPITTWMVVGLNCGGGEGGGGEGGGEGEQEENEEEEKEEEEKEEEEKEEEEKQEE
EKEEEEKQEEEEEKEEEEEKEQEEEEEKEQEKEEEEEEKERKEEKRSYSPIRKKKKKEEE
KEEEEEEEGEREEEERREEEGGGGRGGRGGRGEKEEEEEKEEELQTQPIVNQKIMSFLSP
FWKFSADPKIEAAKLPSQIQSKNDGE

>gi568815574r:1090900_1312634|GENSCAN_predicted_CDS_6|621_bp
atgggtcctcatcctggccccatcactacctggatggtcgttgggttaaactgtggagga
ggagaaggaggaggaggagaaggaggaggagaaggggagcaggaggagaatgaggaggag
gagaaggaggaggaggagaaggaggaggaggagaaggaggaggaggagaagcaggaggag
gagaaggaggaggaggagaagcaggaggaggaggaggagaaggaggaggaggaggagaag
gagcaggaggaggaggaggagaaggagcaggagaaggaggaggaggaggaggagaaggag
aggaaggaggagaaaagaagctactcgcccataaggaagaagaagaaaaaggaggaggag
aaggaggaggaagaagaagaagaaggggaaagagaagaagaagaaagaagagaagaagaa
ggaggaggaggaagaggaggaagaggaggaaggggggagaaggaggaggaagaagagaag
gaggaggagctacaaactcaaccaattgtcaaccagaaaataatgagttttctttcccct
ttctggaaattttcggctgatcctaaaatagaggccgccaagcttccttctcagattcaa
agcaagaatgatggagagtga

>gi568815574r:1090900_1312634|GENSCAN_predicted_peptide_7|863_aa
MNLSWDCQENTTFSKCFLTDKKNRVVEPRLSNNECSCTFREICLHEGVTFEVHVNTSQRG
FQQKLLYPNSGREGTAAQNFSCFIYNADLMNCTWARGPTAPRDVQYFLYIRNSKRRREIR
CPYYIQDSGTHVGCHLDNLSGLTSRNYFLVNGTSREIGIQFFDSLLDTKKIERFNPPSNV
TVRCNTTHCLVRWKQPRTYQKLSYLDFQYQLDVHRKNTQPGTENLLSPTHDPYTLLPMTP
GGTLQSPTHDPYSLLPMTPGRTLQSPTHDPYTLLPMTPGRTVQSPTHDPYSLLPMTPGGT
VQSPTHDPYSLLPMTPGGTVQSPTHDPYTLLPMTPGGTLQSPTHDPYSLLPMTPGGTLQS
PTHDPYSLLPMTPGGTVQSPTHDPYSLLPMTPGGTLQSPTHDPYSLLPMTPGRTLQSPTH
DPYTLLPMTPGGTVQSPTHDPYSLLPMTPGGTVQSPTHDPYTLLPKTPGGTLQSPTHDPY
TFLPMTPGGTLQSPTHDPYTLLPMTPGGTLQSPTHDPYSLLHMTPGGTLQSPTHDPYSLL
PMTPGGTLQSPTHDPYSLLPMTPGGTVQSPTHDPYSLLPMTPGGTLQSPTHDPYSLLPMT
PGRTLQSPTHDPYTLLPITPGGTVQSPTHDPYSLLPMTPGGTLQSPTHDPYSLLPMTPGG
TLQSPTHDPYSLLLMTPGVTLQSPTHDPYSLLLMTPGINVSGDLENRYNFPSSEPRAKHS
VKIRAADVRILNWSSWSEAIEFGSDDGNLGSVYIYVLLIVGTLVCGIVLGFLFKRFLRIQ
RLFPPVPQIKDKLNDNHEVEDEVSCSQALPKTTLFIVNYEVPWVDLSQIFTPGKTHGQII
WEEFTPEEGKGYREEVLTVKEIT

>gi568815574r:1090900_1312634|GENSCAN_predicted_CDS_7|2592_bp
atgaatttaagctgggactgccaagaaaacacaaccttcagcaagtgtttcttaactgac
aagaagaacagagtcgtggaacccaggctcagtaacaacgaatgttcgtgcacatttcgt
gaaatttgtctgcatgaaggagtcacatttgaggttcacgtgaatactagtcaaagagga
tttcaacagaaactgctttatccaaattcaggaagggagggtaccgctgctcagaatttc
tcctgtttcatctacaatgcggatttaatgaactgtacctgggcgaggggtccgacggcc
ccccgtgacgtccagtattttttgtacatacgaaactcaaagagaaggagggagatccgg
tgtccttattacatacaagactcaggaacccatgtgggatgtcacctggataacctgtca
ggattaacgtctcgcaattactttctggttaacggaaccagccgagaaattggcatccaa
ttctttgattcacttttggacacaaagaaaatagaacgattcaaccctcccagcaatgtc
accgtacgttgcaacacgacgcactgcctcgtacggtggaaacagcccaggacctatcag
aagctgtcgtacctggactttcagtaccagctggacgtccacagaaagaatacccagcct
ggcacggaaaacctactgtcccctactcacgacccctacactctcctacccatgacccct
ggcggaaccctacagtcccctactcacgacccgtacagtctcctacccatgacccctggc
agaaccctacagtcccctactcacgacccctacactctcctacccatgacccctggcaga
accgtacagtcccctactcacgacccctacagtctcctacccatgacccctggcggaact
gtacagtcccctactcacgacccctacagtctcctacccatgacccctggcggaactgta
cagtcccctactcacgacccctacactctcctacccatgacccctggcggaaccctacag
tcccctactcacgacccctacagtctcctacccatgacccctggaggaaccctacagtcc
cctactcacgacccctacagtctcctacccatgacccctggcggaactgtacagtcccct
actcacgacccctacagtctcctacccatgacccctggcggaaccctacagtcccctact
cacgacccgtacagtctcctacccatgacccctggcagaaccctacagtcccctactcac
gacccctacactctcctacccatgacccctggcggaaccgtacagtcccctactcacgac
ccctacagtctcctacccatgacccctggcggaaccgtacagtcccctactcacgacccc
tacactctcctacccaagacccctggcggaaccctacagtcccctactcacgacccctac
actttcctacccatgacccctggcggaaccctacagtcccctactcacgacccctacact
ctcctacccatgacccctggcggaaccctacagtcccctactcacgacccctacagtctc
ctacacatgacccctggcggaaccctacagtcccctactcacgacccctacagtctccta
cccatgacccctggaggaaccctacagtcccctactcacgacccctacagtctcctaccc
atgacccctggcggaactgtacagtcccctactcacgacccctacagtctcctacccatg
acccctggcggaaccctacagtcccctactcacgacccgtacagtctcctacccatgacc
cctggcagaaccctacagtcccctactcacgacccctacactctcctacccataacccct
ggcggaaccgtacagtcccctactcacgacccctacagtctcctacccatgacccctggc
ggaaccctacagtcccctactcacgacccctacagtctcctacccatgacccctggagga
accctacagtcccctactcacgacccctacagtctcctactcatgacccctggagtaacc
ctacagtcccctactcacgacccctacagtctcctactcatgacccctggaattaatgtt
tctggtgatttggaaaatagatacaactttccaagctctgagcccagagcaaaacacagt
gtgaagatcagagctgcagacgtccgcatcttgaattggagctcctggagtgaagccatt
gaatttggttctgacgacgggaacctcggctctgtgtacatttatgtgctcctaatcgtg
ggaacccttgtctgtggcatcgtcctcggcttcctctttaaaaggttccttaggatacag
cggctgttcccgccagttccacagatcaaagacaaactgaatgataaccatgaggtggaa
gacgaggtttcatgctcacaagctcttccaaagaccaccctgttcatcgtcaactatgag
gtcccatgggtggatctgtctcagatctttaccccaggaaaaacccatggccagatcatc
tgggaggaattcaccccagaggaagggaaaggctaccgcgaagaggtcttgaccgtgaag
gaaattacctga