GENSCAN 1.0	Date run:  7-Nov-116	Time: 16:43:52

Sequence gi568815588r:70332939_70541667 : 208729 bp : 49.51% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.06 Intr -   3343   3264   80  1  2   46  100   102 0.233   5.55
 1.05 Intr -   4241   4129  113  0  2   97   47     3 0.232  -2.80
 1.04 Intr -   7764   7615  150  1  0   93   80   231 0.862  22.93
 1.03 Intr -  27532  27409  124  1  1   15   64   157 0.193   6.16
 1.02 Intr -  38578  38439  140  2  2   67   78    32 0.246   0.28
 1.01 Init -  43595  43514   82  2  1   47   92   111 0.479   8.53
 1.00 Prom -  45007  44968   40                              -6.86

 2.00 Prom +  55465  55504   40                              -3.26
 2.01 Sngl +  56488  57510 1023  0  0   52   48   361 0.505  25.57
 2.02 PlyA +  57672  57677    6                               1.05

 3.00 Prom +  70174  70213   40                              -6.96
 3.01 Init +  71464  71608  145  0  1   80   83   167 0.176  15.80
 3.02 Intr +  86976  87161  186  1  0  101   91    72 0.759   8.46
 3.03 Term +  90084  90157   74  1  2  127   54     6 0.627  -0.83
 3.04 PlyA +  93041  93046    6                               1.05

 4.04 PlyA -  93507  93502    6                               1.05
 4.03 Term - 100150  99998  153  1  0  115   45   122 0.558   8.52
 4.02 Intr - 103045 102348  698  2  2   92   75   559 0.992  46.21
 4.01 Init - 108729 108537  193  0  1   98  102   269 0.993  26.43
 4.00 Prom - 113762 113723   40                              -6.76

 5.00 Prom + 122074 122113   40                              -5.96
 5.01 Init + 125458 125569  112  0  1   79  100   127 0.609  11.41
 5.02 Intr + 126932 127020   89  0  2   82  -23   118 0.386  -0.21
 5.03 Term + 127402 127500   99  0  0   85   43    82 0.787   1.53
 5.04 PlyA + 128125 128130    6                               1.05

 6.00 Prom + 132356 132395   40                              -6.46
 6.01 Init + 145977 146121  145  2  1   64   86   195 0.955  15.18
 6.02 Intr + 147676 147790  115  2  1  104   37    43 0.539   0.31
 6.03 Intr + 149002 149195  194  1  2   84   68    59 0.376   2.64
 6.04 Intr + 152981 153160  180  0  0   84   66    37 0.028   0.94
 6.05 Term + 162181 162275   95  2  2  122   42    51 0.607   1.89
 6.06 PlyA + 162767 162772    6                               1.05

 7.06 PlyA - 163331 163326    6                               1.05
 7.05 Term - 163904 163817   88  1  1   85   44    52 0.386  -2.37
 7.04 Intr - 164585 164365  221  2  2   38   94   106 0.100   3.30
 7.03 Intr - 171014 170921   94  1  1   41  101    88 0.199   5.37
 7.02 Intr - 171125 171080   46  0  1  135   57    22 0.272   1.27
 7.01 Init - 176148 175995  154  0  1   89   62    65 0.756   4.16
 7.00 Prom - 178624 178585   40                              -6.56

 8.00 Prom + 178786 178825   40                             -10.25
 8.01 Init + 180947 181027   81  1  0   86   99   128 0.784  12.70
 8.02 Intr + 182430 182649  220  2  1    8   44   162 0.348   1.67
 8.03 Intr + 190191 190271   81  1  0   99   78    66 0.088   6.31
 8.04 Intr + 193057 193198  142  2  1    3   94   153 0.021   6.81
 8.05 Intr + 196291 196393  103  1  1  131   63   240 0.995  25.98
 8.06 Intr + 196951 197130  180  0  0   93  110   178 0.981  20.56
 8.07 Intr + 198352 198516  165  0  0   77   78   253 0.857  23.36
 8.08 Intr + 199683 199843  161  2  2   99   81   289 0.977  28.09
 8.09 Intr + 200057 200132   76  2  1  105   60    77 0.993   6.12
 8.10 Intr + 200984 201135  152  1  2   90   70   142 0.676  11.56
 8.11 Intr + 201487 201586  100  1  1   66  105    85 0.998   8.11
 8.12 Intr + 201801 201905  105  2  0   75   94    79 0.993   7.61
 8.13 Intr + 204873 204968   96  2  0  111   75   145 0.999  15.71
 8.14 Intr + 205342 205553  212  0  2   60   86   217 0.536  16.41
 8.15 Intr + 205914 206100  187  0  1   58   31   246 0.318  15.59
 8.16 Intr + 206154 206309  156  2  0   82   78   159 0.993  14.51
 8.17 Intr + 206642 206824  183  1  0   80   78   162 0.974  14.38
 8.18 Intr + 208164 208304  141  2  0   99   70   242 0.557  24.05
 8.19 Intr + 208525 208596   72  0  0   55   99    89 0.945   6.30

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init - 145151 144944  208  2  1   88   97   111 0.899   9.80


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815588r:70332939_70541667|GENSCAN_predicted_peptide_1|230_aa
MLKKMGEAVARVARKVNETVESGSDTLGSWLCSVHGDWLLKNNRDTEEQDLKRPEARDST
THIPGSPQAPSTQQSETLSQKKRNEEQEKEEEEEEGEEEEGDGEEEEEEESNEEPDLAEC
KLVSFPIGIYKVLRNVSGQIHLITLANNELKSLTSKFMTTFSQLREVGCLSAGERTSCFL
PACHNVSWGCPGDSSARPKALAGSLTSLPVNSIQQIPTSIGFGVAVGMHG

>gi568815588r:70332939_70541667|GENSCAN_predicted_CDS_1|690_bp
atgctgaagaagatgggtgaggccgtggccagagtagcaaggaaggtcaacgagacggtg
gagagcggctctgacactctgggctcctggctctgcagtgtgcatggggactggctttta
aagaataatcgtgacacagaggagcaggatttgaaaaggcctgaggcccgagactctact
acacacatccctgggagcccccaggcacctagtacacagcagagtgagaccctgtctcaa
aagaaaagaaatgaagagcaagagaaggaggaagaagaggaggagggggaggaggaggag
ggagatggggaggaggaggaggaggaggaaagcaatgaggaaccagacctggccgagtgc
aagctggtctcctttcccattggcatctacaaggtcctgcggaatgtctctggccagatc
cacctcatcaccctggctaacaacgagcttaagtccctcaccagcaagttcatgaccaca
ttcagtcagctccgagaggtgggctgccttagtgctggggagagaacaagctgcttcctc
cctgcctgccacaatgtctcctggggctgccctggggactcttctgcaaggcccaaggcc
ctggcagggtctctcacatccctgcccgtcaactcaatccagcagattcccacaagcatt
gggttcggtgtggctgtgggaatgcacggn

>gi568815588r:70332939_70541667|GENSCAN_predicted_peptide_2|340_aa
MDSELMHSIVGSYHKPPERVFVPSFTQNEPSQNCHPANLEVTSPKILHSPNSQALILALK
TLQEKIHCLELERTQAEDDLNILSREAAQYKKALENETNERNLAHQELIKQKKDVSIQLS
SAQSRCTLLEKQLEYTKRMVLNVEREKNMILEQQAQLQREKEQDQMKLYAKLDKLDVLEK
ECFRLTTTQKTAEDKIKHLEEKLKEEEHQRKLFQDKASELQTGLEISKIMSSVSNLKHSK
EKKKSSKKTKCIKRGPPWQICSKFGALPFVAEKMRQHRDPHILQKPFNVTETRCLPKPSR
TTAWCKAITPDSEKSISICDNLSELLMAMQDELDQMSMEH

>gi568815588r:70332939_70541667|GENSCAN_predicted_CDS_2|1023_bp
atggattctgaattaatgcatagtatagtaggaagctatcataaacctccagaaagagta
tttgttccctcattcacccagaatgaaccatctcagaattgccatcctgcgaacttagaa
gttacctctcctaagatacttcatagcccaaatagccaagctcttattttagccttaaaa
actcttcaggaaaaaattcattgtttagagctggagagaacacaagctgaagatgacctg
aacattctttccagagaagcagcacagtataagaaggccttagagaatgaaacaaatgag
agaaatctagcacatcaggagctgataaagcagaaaaaagatgtaagtatacagttaagc
tcagcccagtctcgttgcactcttctagagaagcaactagaatatacaaagagaatggtt
ctcaatgtagagcgagaaaagaacatgatcctagaacaacaggcccagcttcagagggaa
aaagaacaagatcagatgaagctgtatgcaaaacttgacaagcttgatgtcttagaaaaa
gagtgttttagacttacaacaactcagaaaactgctgaggacaagattaaacatttagaa
gaaaaacttaaggaagaagaacatcagcgtaagctatttcaagacaaagcttctgagctt
caaactggacttgaaatcagtaaaattatgtcttcagtttcaaatttaaagcactccaag
gaaaagaagaaatcttcaaagaaaactaaatgtataaagagaggaccaccttggcaaatt
tgttcaaagtttggagcactgccttttgtggctgaaaagatgaggcaacatcgtgaccca
catatccttcagaaaccttttaacgtgactgagactagatgtctccccaagccttctaga
acaactgcctggtgtaaagctattactcctgactcagaaaagtccatttccatttgtgac
aatttatctgaacttttgatggcaatgcaagatgagctggaccaaatgagcatggagcac
taa

>gi568815588r:70332939_70541667|GENSCAN_predicted_peptide_3|134_aa
MSSSAGSGHQPSQSRAIPTRTVAISDAAQLPHDYCTTPGGTLFSTTPGGTRIIYDRKFLL
DRRNSPMAQTPPCHLPNIPGVTSPGTLIEDSKVEVNNLNNLNNHDRKHAVGHFSNLHQRY
LKCWYLRISVTPLI

>gi568815588r:70332939_70541667|GENSCAN_predicted_CDS_3|405_bp
atgtcctcgtcagccggcagcggccaccagcccagccagagccgcgccatccccacccgc
accgtggccatcagcgacgccgcgcagctacctcatgactattgcaccacgcccgggggg
acgctcttctccaccacaccgggaggaactcgaatcatttatgacagaaagtttctgttg
gatcgtcgcaattctcccatggctcagaccccaccctgccacctgcccaatatcccagga
gtcactagccctggcaccttaattgaagactccaaagtagaagtaaacaatttgaacaac
ttgaacaatcacgacaggaaacatgcagttggccatttttcaaatttacatcaaagatac
ctgaagtgttggtatctgagaatatctgtcactcctcttatctga

>gi568815588r:70332939_70541667|GENSCAN_predicted_peptide_4|347_aa
MHAHCLPFLLHAWWALLQAGAATVATALLRTRGQPSSPSPLAYMLSLYRDPLPRADIIRS
LQAEDVAVDGQNWTFAFDFSFLSQQEDLAWAELRLQLSSPVDLPTEGSLAIEIFHQPKPD
TEQASDSCLERFQMDLFTVTLSQVTFSLGSMVLEVTRPLSKWLKHPGALEKQMSRVAGEC
WPRPPTPPATNVLLMLYSNLSQEQRQLGGSTLLWEAESSWRAQEGQLSWEWGKRHRRHHL
PDRSQLCRKVKFQVDFNLIGWGSWIIYPKQYNAYRCEGECPNPVGEEFHPTNHAYIQSLL
KRYQPHRVPSTCCAPVKTKPLSMLYVDNGRVLLDHHKDMIVEECGCL

>gi568815588r:70332939_70541667|GENSCAN_predicted_CDS_4|1044_bp
atgcacgcccactgcctgcccttccttctgcacgcctggtgggccctactccaggcgggt
gctgcgacggtggccactgcgctcctgcgtacgcgggggcagccctcgtcgccatcccct
ctggcgtacatgctgagcctctaccgcgacccgctgccgagggcagacatcatccgcagc
ctacaggcagaagatgtggcagtggatgggcagaactggacgtttgcttttgacttctcc
ttcctgagccaacaagaggatctggcatgggctgagctccggctgcagctgtccagccct
gtggacctccccactgagggctcacttgccattgagattttccaccagccaaagcccgac
acagagcaggcttcagacagctgcttagagcggtttcagatggacctattcactgtcact
ttgtcccaggtcaccttttccttgggcagcatggttttggaggtgaccaggcctctctcc
aagtggctgaagcaccctggggccctggagaagcagatgtccagggtagctggagagtgc
tggccgcggccccccacaccgcctgccaccaatgtgctccttatgctctactccaacctc
tcgcaggagcagaggcagctgggtgggtccaccttgctgtgggaagccgagagctcctgg
cgggcccaggagggacagctgtcctgggagtggggcaagaggcaccgtcgacatcacttg
ccagacagaagtcaactgtgtcggaaggtcaagttccaggtggacttcaacctgatcgga
tggggctcctggatcatctaccccaagcagtacaacgcctatcgctgtgagggcgagtgt
cctaatcctgttggggaggagtttcatccgaccaaccatgcatacatccagagtctgctg
aaacgttaccagccccaccgagtcccttccacttgttgtgccccagtgaagaccaagccg
ctgagcatgctgtatgtggataatggcagagtgctcctagatcaccataaagacatgatc
gtggaagaatgtgggtgcctctga

>gi568815588r:70332939_70541667|GENSCAN_predicted_peptide_5|99_aa
MAGPTEPGEVSAPGRPAGLEAEAQAPALVGKRAEGDPASPLPSSCRTFSTAVVRGAYTPR
FTVTLHPTSPQNSGPLHPPAYRASPVGSLTVISGSIHQD

>gi568815588r:70332939_70541667|GENSCAN_predicted_CDS_5|300_bp
atggcaggacctacggagcccggtgaggtgagcgcgccaggccggccggctgggctggag
gcagaggcccaggcgcccgccctcgtgggaaagcgcgcggagggcgacccggccagccct
ctcccctccagctgccgcaccttctccacagcagttgtccgtggtgcctacactccccgc
ttcacggtcacccttcacccgaccagtcctcagaactctggacccctgcacccaccggcc
taccgtgcgtctcccgtgggctccctcacagtcatctccggctccattcatcaagactga

>gi568815588r:70332939_70541667|GENSCAN_predicted_peptide_6|242_aa
MGWRSWEERAGARARAGRAPSLPDSAPAVRAQHAGRRSTDAPRSRGLAGFCFSGALRGGG
SVLMLVALGAVLGVGVAELTRSPWLALVGSVTSTSLWVQWEKISAKHVAQCMAWSECSVD
VAVGAFDYEPSPVARTLQGFLSSQVHGPGPLDEDSGTVAVQMFSHGRVIQEHLRAPFMRQ
AVVLGASSYLIFLGFIPASYADCLGFERLLPGHLHGPFPLLPGMCLHTAGAFLSSYVGIG
LP

>gi568815588r:70332939_70541667|GENSCAN_predicted_CDS_6|729_bp
atgggctggcgaagttgggaggagcgagctggagccagagcgcgcgccgggcgcgccccg
tcgctgcctgactcggcgcccgcagttcgggcgcagcacgccggccgcaggagcacggat
gccccccggagccgcgggctggcaggtttctgtttttctggagcacttcgtggaggtggc
agtgtgctcatgctcgtggccttgggtgcagttctgggagtgggagttgctgagctcacc
cgaagcccttggctggcactagtggggtcagtaacctctacctccttgtgggttcagtgg
gagaaaatcagtgcaaagcatgtggcccagtgcatggcatggagtgagtgctcagttgat
gtggcggtgggggcctttgattatgagccatcccctgtggccaggactctgcagggcttc
ctcagcagccaggtgcatggccctgggcctctggacgaggactctgggactgtggctgtg
cagatgttttctcatggcagagttatccaagaacatcttcgtgctccctttatgaggcaa
gctgttgttcttggggcatcatcttatttaatttttcttggcttcattccagcaagttat
gccgattgtttaggatttgagaggttactgccagggcatctgcacgggccgttccctctg
ctgccgggcatgtgtcttcacacggccggggccttcctgtcttcatacgtcggcataggc
cttccgtga

>gi568815588r:70332939_70541667|GENSCAN_predicted_peptide_7|200_aa
MELKIGPDSGGRQRAEWPAGGNICLSSRTNTEEAAVLQGSPTVGAEHMKRPGADTEAQMV
RVNLPQGCPSSYITLPKEVRKDKRRRDTKEATDMKEENSSGWRDGADMERAKGTTTQRVG
TVRRAVRVALRNDPNATSGQGVGGLVARHAPAPDRLGLSEAAVHTCTRQEHTPSGTSSVS
LLVKGGFYPSTQQFTPGSTS

>gi568815588r:70332939_70541667|GENSCAN_predicted_CDS_7|603_bp
atggagctaaaaatagggcccgactctgggggacggcagagggccgagtggccagctgga
ggaaacatctgcctcagctcaagaacaaatacagaggaagctgccgtgctgcagggttcc
cctactgtgggtgcagagcacatgaaacgtccaggtgcagacactgaggcccagatggtc
cgggttaacttgccccaaggctgcccctcatcttacatcacgctcccaaaggaagtgcgg
aaggataaaagaagacgtgatacaaaggaagccacagacatgaaagaagagaatagctca
ggatggagagatggagcagatatggaaagagctaaaggcaccaccacccagagagttggc
acagtcaggagagctgtgcgagtggcgctgaggaatgacccaaacgctacctcgggtcag
ggagttggcggccttgtggccaggcatgcgccggccccagacaggctgggtctgagcgag
gcagctgtgcacacctgcacccgccaggagcacacaccctctggaacctcctcggtctcc
ctcttggtgaaaggaggattctaccccagcacccagcagttcacacctggctctacgtcc
tag

>gi568815588r:70332939_70541667|GENSCAN_predicted_peptide_8|871_aa
MAGPHPVTQGPLLAAGQALSSREPACQTKQNEESDVMIVVVKEGGCCGPAQPGSALLAAL
VESQGLLAIHRWRLGEAPGSSPGPEGSRLWQLAVAGSSVQAVNICVVSGPPLQGTSCSLS
LPLEPMRGTPFEGLQGSGTMDSRHSVSIHSFQSTSLHNSKAKSIIPNKVAPVVITYNCKE
EFQIHDELLKAHYTLGRLSDNTPEHYLVQGRYFLVRDVTEKMDVLGTVGSCGAPNFRQVQ
GGLTVFGMGQPSLSGFRRVLQKLQKDGHRECVIFCVREEPVLFLRADEDFVSYTPRDKQN
LHENLQGLGPGVRVESLELAIRKEIHDFAQLSENTYHVYHNTEDLWGEPHAVAIHGEDDL
HVTEEVYKRPLFLQPTYRYHRLPLPEQGSPLEAQLDAFVSVLRETPSLLQLRDAHGPPPA
LVFSCQMGVGRTNLGMVLGTLILLHRSGTTSQPEAAPTQAKPLPMEQFQVIQSFLRMVPQ
GRRMVEEVDRAITACAELHDLKEVVLENQKKLEGIRPESPAQGSGSRHSVWQRALWSLER
YFYLILFNYYLHEQYPLAFALSFSRWLCAHPELYRLPVTLSSAGPVAPRDLIARGSLVSM
TGSRRSGHGCVLALAPKHWIPVGLGRLLWVPGLVLSPQREDDLVSPDALSTVREMDVANF
RRVPRMPIYGTAQPSAKVTGPQGLGPPALGSILAYLTDAKRRLRKVVWVSLREEAVLECD
GHTYSLRWPGPPVAPDQLETLEAQLKAHLSEPPPGKEGPLTYRFQTCLTMQEVFSQHRRA
CPGLTYHRIPMPDFCAPREEDFDQLLEALRAALSKDPGTGFVFSCLSGQGRTTTAMVVAV
LAFWHIQGFPEVGEEELVSVPDAKFTKGEFQ

>gi568815588r:70332939_70541667|GENSCAN_predicted_CDS_8|2613_bp
atggctggcccacacccggtgacccagggaccgctgctggctgcggggcaggctttgtca
tcccgagaacccgcctgccagacaaagcagaatgaggagagtgatgtgatgatcgtggtt
gttaaggagggtggctgctgtggcccagcccagcctggctctgccctgctggctgccttg
gttgagagccagggactgctggccattcacagatggcgcctgggcgaggcccctggttct
agtcctggtcctgaaggttcacgtctgtggcagctggcagttgctgggagttcagtgcag
gctgtgaacatctgtgtcgtctctgggccacccttgcagggcaccagctgtagcctgtca
ttgcctctggagcccatgagaggcaccccatttgagggcctacagggcagtggcacgatg
gacagtcggcactccgtcagcatccactccttccagagcactagcttgcataacagcaag
gccaagtccatcatccccaacaaggtggcccctgttgtgatcacgtacaactgcaaggag
gagttccagatccatgatgagctgctcaaggctcattacacgttgggccggctctcggac
aacacccctgagcactacctggtgcaaggccgctacttcctggtgcgggatgtcactgag
aagatggatgtgctgggcaccgtgggaagctgtggggcccccaacttccggcaggtgcag
ggtgggctcactgtgttcggcatgggacagcccagcctctcagggttcaggcgggtcctc
cagaaactccagaaggacggacatagggagtgtgtcatcttctgtgtgcgggaggaacct
gtgcttttcctgcgtgcagatgaggactttgtgtcctacacacctcgagacaagcagaac
cttcatgagaacctccagggccttggacccggggtccgggtggagagcctggagctggcc
atccggaaagagatccacgactttgcccagctgagcgagaacacataccatgtgtaccat
aacaccgaggacctgtggggggagccccatgctgtggccatccatggtgaggacgacttg
catgtgacggaggaggtgtacaagcggcccctcttcctgcagcccacctacaggtaccac
cgcctgcccctgcccgagcaagggagtcccctggaggcccagttggacgcctttgtcagt
gttctccgggagacccccagcctgctgcagctccgtgatgcccacgggcctcccccagcc
ctcgtcttcagctgccagatgggcgtgggcaggaccaacctgggcatggtcctgggcacc
ctcatcctgcttcaccgcagtgggaccacctcccagccagaggctgcccccacgcaggcc
aagcccctgcctatggagcagttccaggtgatccagagctttctccgcatggtgccccag
ggaaggaggatggtggaagaggtggacagagccatcactgcctgtgccgagttgcatgac
ctgaaagaagtggtcttggaaaaccagaagaagttagaaggtatccgaccggagagccca
gcccagggaagcggcagccgacacagcgtctggcagagggcgctgtggagcctggagcga
tacttctacctgatcctgtttaactactaccttcatgagcagtacccgctggcctttgcc
ctcagtttcagccgctggctgtgtgcccaccctgagctgtaccgcctgcccgtgacgctg
agctcagcaggccctgtggctccgagggacctcatcgccaggggctccctagtgagtatg
actggcagtcggagaagtgggcatggctgtgtactggccctggcccctaaacactggatt
cctgtagggttgggtcggctgctgtgggtcccaggcttggtgctctccccacagcgggag
gacgatctggtctccccggacgcgctcagcactgtcagagagatggatgtggccaacttc
cggcgggtgccccgcatgcccatctacggcacggcccagcccagcgccaaggtgaccggc
cctcagggcctgggtcccccagccctggggagcatcctggcctacctgacggacgccaag
aggaggctgcggaaggttgtctgggtgagccttcgggaggaggccgtgttggagtgtgac
gggcacacctacagcctgcggtggcctgggccccctgtggctcctgaccagctggagacc
ctggaggcccagctgaaggcccatctaagcgagcctcccccaggcaaggagggccccctg
acctacaggttccagacctgccttaccatgcaggaggtcttcagccagcaccgcagggcc
tgtcctggcctcacctaccaccgcatccccatgccggacttctgtgccccccgagaggag
gactttgaccagctgctggaggccctgcgggccgccctctccaaggacccaggcactggc
ttcgtgttcagctgcctcagcggccagggccgtaccacaactgcgatggtggtggctgtc
ctggccttctggcacatccaaggcttccccgaggtgggtgaggaggagctcgtgagtgtg
cctgatgccaagttcactaagggtgaatttcag