GENSCAN 1.0	Date run:  7-Nov-116	Time: 16:01:25

Sequence gi568815580f:24360729_24577559 : 216831 bp : 41.77% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +  15161  15323  163  1  1   60   44   181 0.676   8.86
 1.02 Intr +  15766  15950  185  2  2   60   27   153 0.694   4.99
 1.03 Intr +  16232  16386  155  1  2   35   58   115 0.031   1.15
 1.04 Term +  37293  37476  184  0  1   52   39   216 0.928   9.13
 1.05 PlyA +  38204  38209    6                               1.05

 2.00 Prom +  50000  50039   40                              -5.65
 2.01 Init +  66029  66064   36  1  0   83   94    34 0.561   3.57
 2.02 Intr +  67191  67319  129  2  0   55   80   127 0.814   8.57
 2.03 Intr +  69611  69656   46  1  1   57   92     8 0.053  -4.84
 2.04 Intr +  79768  79890  123  2  0   66   75   136 0.984   9.74
 2.05 Intr +  82321  82424  104  2  2   69  103   102 0.994   8.77
 2.06 Intr +  84665  84738   74  1  2   68  109    30 0.968   0.39
 2.07 Intr +  87365  87455   91  2  1   48   92    98 0.558   5.28
 2.08 Intr +  89091  89225  135  2  0   18   95    88 0.781   2.34
 2.09 Intr + 102635 102795  161  1  2   97   77   -18 0.012  -4.14
 2.10 Intr + 103472 103610  139  2  1   76   44   127 0.865   6.65
 2.11 Intr + 106009 106078   70  0  1   61   69    54 0.557  -1.36
 2.12 Intr + 108060 108223  164  1  2   88   87    35 0.488   2.17
 2.13 Intr + 116019 116283  265  2  1   87   39   174 0.588   8.56
 2.14 Intr + 122252 122417  166  0  1   44   78   127 0.724   5.40
 2.15 Intr + 124557 124662  106  0  1   33   66    39 0.114  -4.50
 2.16 Term + 129922 130194  273  0  0   47   34   182 0.217   3.19
 2.17 PlyA + 130336 130341    6                              -0.45

 3.09 PlyA - 130762 130757    6                               1.05
 3.08 Term - 131163 131004  160  2  1  109   43   120 0.926   6.03
 3.07 Intr - 135204 135061  144  2  0   29   76   118 0.453   3.18
 3.06 Intr - 138219 138094  126  2  0   27   51   119 0.239   0.97
 3.05 Intr - 139328 139206  123  1  0   73   52    85 0.288   2.18
 3.04 Intr - 142521 142357  165  2  0   59   77    65 0.159   0.65
 3.03 Intr - 146618 146358  261  1  0   34   72   267 0.024  15.38
 3.02 Intr - 148127 147655  473  2  2   12   82   382 0.032  20.95
 3.01 Init - 148937 148791  147  2  0  105   84    31 0.768   4.55
 3.00 Prom - 149220 149181   40                              -6.05

 4.00 Prom + 155477 155516   40                              -7.85
 4.01 Init + 157005 157063   59  2  2   61   94    65 0.110   5.25
 4.02 Intr + 157937 158114  178  2  1   82  100   146 0.805  14.20
 4.03 Term + 160075 160179  105  0  0  107   43    90 0.970   3.83
 4.04 PlyA + 160186 160191    6                              -1.75

 5.07 PlyA - 161080 161075    6                               1.05
 5.06 Term - 162167 161635  533  0  2  -16   43   479 0.300  26.42
 5.05 Intr - 162520 162430   91  1  1   63   75    62 0.161   1.05
 5.04 Intr - 180552 180193  360  0  0   36   48   207 0.062   5.99
 5.03 Intr - 183652 183490  163  0  1   98   68   125 0.968  10.56
 5.02 Intr - 205889 205812   78  1  0   63   94    47 0.168   0.55
 5.01 Init - 209371 209052  320  1  2   46   68   172 0.719   7.85

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init +  36575  36618   44  1  2   49   58    85 0.835   1.56
S.002 Init -  57656  57543  114  2  0   76   91    96 0.961   8.96
S.003 Term - 148127 147651  477  2  0   12   43   383 0.810  20.05
S.004 Term - 180552 180187  366  0  0   36   49   213 0.842   5.82
S.005 Init - 183726 183713   14  0  2   75   91    12 0.914  -0.13
S.006 Term - 201938 201811  128  0  2   93   47    96 0.881   3.46


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815580f:24360729_24577559|GENSCAN_predicted_peptide_1|228_aa
MKPRTLAVSVTALKAARLELFVPPGGLVVSLASGVKLQTFAVSVTAHKSSVDPKNSGAQL
ASPSGSRTGAAGGAACQSCTMRPHSSALGWWMGLGAVEQGAVLIEEAWAAQEPMEGRLSF
HTSLQAEGAGSSLGQHRKGLPQCSDGLKGSSSAAKVGAQAEEARKRARFCQLLGTRKAFA
LLPPHPEGRSGRPYPETTRNRPCEPVEDSRPQAKYKSWVNSLKSVIKQ

>gi568815580f:24360729_24577559|GENSCAN_predicted_CDS_1|687_bp
atgaagccgcggaccctcgcggtgagtgttacagctcttaaggcggcgcgtctggagttg
tttgttcctcccggtgggctcgtggtctccctggcttcaggagtgaagctgcagaccttc
gcagtgagtgttacagctcataaaagcagtgtggacccaaagaactcaggagcccagctg
gcttcacccagtggatcccgcactggggctgcaggtggagctgcctgccagtcctgcacc
atgcgcccgcactcctcagcccttgggtggtggatgggactgggcgctgtggagcagggg
gcagtgctcatcgaggaggcttgggccgcacaggagcccatggaggggcgcctctccttc
cacacctccctgcaagccgagggagccggctccagccttggccagcacagaaaggggctc
ccacagtgcagcgatgggctgaagggctcctcaagtgccgccaaagtgggagcccaggca
gaggaggcccgaaagcgagcgaggttttgccagctactagggacgcgtaaagccttcgcg
ctcctcccaccacaccccgagggaagaagtggcaggccttacccggagactacaaggaac
cgcccgtgtgagccagtggaagactcgcgtccccaggcaaaatataagtcctgggttaat
agtctgaagtctgtcattaagcaatag

>gi568815580f:24360729_24577559|GENSCAN_predicted_peptide_2|693_aa
MAEGDAGSDQRQNEEIEAMAAIYGEEWCVIDDCAKIFCIRISDDIDDPKWTLCLQGKNVR
IYQIALRKYICPDVKKKTEEEDVECEDDLILACQPESSLKALDFDISETRTEVEVEELPP
IDHGIPITDRRSTFQAHLAPVVCPKQVKMVLSKLYENKKIASATHNIYAYRIYCEDKQTF
LQDCEDDGETAAGGRLLHLMEILNVKNVMVVVSRWYGGILLGPDRFKHINNCARNILVEK
NYTNSPLHPEVCIFNAGLTMTQSLGAFCNRIQVFWQCCSFSFAMLGNEPFVSAWKKAWTC
SGAGDIPDQDSGQYWFLMRAVFLACRRLPSTCVLKRPFSECAQRERTNLVLMKKWEFLEV
PDTFEVTQQSVISIPLYIPHTLFEWDFGKEICVFWLTTDYLLCTASVYNIVLISYDRYLS
VSNAVSYRTQHTGVLKIVTLMVAVWVLAFLVNGPMILVSESWKDEGSECEPGFFSEWYIL
AITSFLEFVIPVILVAYFNMNIYWSLWKRDHLRLGHPKGWGQLVLRLPHGVEGQPWRLQL
VPRMGYIEVGGLLCTAAGEMSTHARSAKLLSTGSENDTLPVPSLASRSLCPSVLSLGSFP
SCQSCLSDQMSQCDTEPERKSFLSMMQGTQHFDNPDGMWSSHGRNVSSGGLHNHCILQMG
TGSAEASHPEGPRGGQGQVTTRATTQKRVAASG

>gi568815580f:24360729_24577559|GENSCAN_predicted_CDS_2|2082_bp
atggctgagggggacgcagggagcgaccagaggcagaatgaggaaattgaagcaatggca
gccatttatggcgaggagtggtgtgtcattgatgactgtgccaaaatattttgtattaga
attagcgacgatatagatgaccccaaatggacactttgcttgcagggcaagaacgtgcgg
atttatcaaatagccttgaggaaatatatatgcccagatgtaaagaagaaaactgaagag
gaagatgttgaatgtgaagatgatctcattttagcatgtcagccggaaagttcgcttaaa
gcattggattttgatatcagtgaaactcggacagaagtagaagtagaagaattacctccg
attgatcatggcattcctattacagaccgaagaagtacttttcaggcacacttggctcca
gtggtttgtcccaaacaggtgaaaatggttctttccaaattgtatgagaataagaaaata
gctagtgccacccacaacatctatgcctacagaatatattgtgaggataaacagaccttc
ttacaggattgtgaggatgatggggaaacagcagctggtgggcgtcttcttcatctcatg
gagattttgaatgtgaagaatgtcatggtggtagtatcacgctggtatggagggattctg
ctaggaccagatcgctttaaacatatcaacaactgtgccagaaacatactagtggaaaag
aactacacaaattcacctcttcatccagaggtctgcatatttaatgcagggctcaccatg
acacagtccctgggagctttttgtaacaggattcaagttttctggcagtgctgttctttc
tcctttgccatgctgggaaatgaaccttttgtctcagcctggaagaaggcgtggacgtgt
tctggagctggggacatcccagatcaagattctggccaatattggttcctgatgagggct
gtctttctggcttgcagacggctgccgtctacctgcgtcctcaagaggcctttctctgag
tgcgcacagagagagagaactaatttggttctcatgaaaaaatgggaattcctggaagta
cctgatacatttgaagtaactcaacaaagtgtgatctccattcctttgtacatccctcac
acgctgttcgaatgggattttggaaaggaaatctgtgtattttggctcactactgactat
ctgttatgtacagcatctgtatataacattgtcctcatcagctatgatcgatacctgtca
gtctcaaatgctgtgtcttatagaactcaacatactggggtcttgaagattgttactctg
atggtggccgtttgggtgctggccttcttagtgaatgggccaatgattctagtttcagag
tcttggaaggatgaaggtagtgaatgtgaacctggatttttttcggaatggtacatcctt
gccatcacatcattcttggaattcgtgatcccagtcatcttagtcgcttatttcaacatg
aatatttattggagcctgtggaagcgtgatcatctcaggcttgggcatcccaagggatgg
ggccagctggtgctcagactgccacatggggttgagggacagccgtggcggctgcagctg
gtccctcggatggggtacattgaagtaggaggcttgttgtgcactgctgctggagagatg
tcaactcacgctagaagtgctaaactgctgtcaacaggcagtgaaaatgacaccttgcca
gttccaagcctagcctcaagaagcctgtgcccatctgttctatctcttggcagttttccc
agctgccagagctgccttagtgaccagatgtcacaatgtgatacagagccagagaggaag
tcatttttgtccatgatgcaaggaacccagcattttgacaacccagatggaatgtggagc
tcccatggaagaaacgtgtcatctggaggcctgcataaccactgcattctccagatgggc
actggaagcgctgaggcttcccacccagaaggtccacgtggtggacaagggcaagtgaca
accagagccacgactcaaaagagggtggctgcttcaggctga

>gi568815580f:24360729_24577559|GENSCAN_predicted_peptide_3|532_aa
MGSKVVPGAGTSVCKCLGVKQLEVFLDYNLLSVLWNRSVVRQDSGRNCRTCYSQLSTVEH
TLHRNCTCVDHEGEALISVQIFISPRRGTVERDLSEKNKGRAILLKSHRVHTQEMPFPCS
KVGKGYLVSSGLFQHQAIHNEKPCRSAMYGDMFHTQQGHFKCIDYGEAFSPKDTPGQHQI
IHTGEKPYVCTECEKTCTRSSNLIQHKDFTLEQALMCTAGVGNPTAEMSTLQGTRKFTTQ
KGFMSGDNVREPLAVPLTLLSTRKFTLQKPYECIECGKVSAKECLVQHQKLTLNDIVGTL
DGHSWNSKCTFQKNQSPTVPNTPSLRGAGWNDPSDSTQIHIAVFQASKSFFFKRLPCSIQ
KCFPITSFPSGRSARFPLTQNKLLLGPHFWCPHSLAARPWWTRSMSHPEPLGEGSYLRSS
LTHGFLTYEPGRAWQRWPPLLHEASFEVAQRGLEDPLSRMVPSHGCQVGASYQLGSESEI
HVIYPRNPGSNWNIEARVGSMPSPFPLDVLIIHVIPACFLPWVIRVITDAVS

>gi568815580f:24360729_24577559|GENSCAN_predicted_CDS_3|1599_bp
atggggtcaaaggttgtccctggagcaggaaccagtgtctgcaaatgcttgggggtgaaa
cagttggaagtgttcctagactacaatctcctttctgtcttgtggaacaggagtgtagtg
aggcaggactcaggccggaactgcaggacatgctacagccagctgagcaccgtggaacac
accctacacagaaactgtacatgtgtggaccatgagggagaagctttaatttcagtgcaa
atcttcatcagccccagaaggggcacagtggagagagacctttctgaaaaaaacaagggc
agggccatcttgttgaagagccacagagttcacactcaagagatgccatttccatgcagc
aaggttggaaaaggctacctggtcagctctggcctcttccagcaccaagcaattcacaat
gagaagccatgcaggagtgccatgtatggggacatgtttcatactcaacaaggacatttc
aaatgcattgactatggagaagcattcagtcctaaagacactcctggccagcaccagata
attcacactggagaaaagccttatgtgtgcactgaatgtgagaaaacctgcacaagaagt
tccaatctcattcagcacaaagacttcactctggagcaagcccttatgtgtacagcaggt
gtgggaaatcctacagcagaaatgtccaccttgcagggcaccagaaagttcacaacacag
aaaggttttatgagtggggacaatgtgagagagcctttggctgtccctctaaccttgctc
agcaccagaaagttcaccctgcaaaagccttatgaatgcatagaatgtgggaaggtttca
gccaaggagtgccttgttcagcaccaaaagttgacactgaatgacattgtgggcactctg
gatggccactcctggaactccaaatgcacatttcaaaaaaatcaatcacccaccgttcca
aacacaccctcactcagaggagcaggatggaatgacccatctgattcaactcagattcat
attgctgttttccaggccagcaaaagttttttcttcaaacgactgccgtgcagtatccaa
aaatgctttccaattacatcattcccttctggaaggtctgcacgatttccactgactcag
aataagctcctacttgggcctcacttctggtgtccccactccctggcagcaaggccttgg
tggactcgatcgatgtcccacccagagccccttggcgagggctcttacctgcggtcttct
ctaactcatggcttcttgacctatgagcctgggagggcttggcagagatggccacctctg
ctccatgaagcatcatttgaggtggcccaacgaggactagaggatccactttcaagaatg
gttccctcacatggctgccaagttggtgccagctatcagctgggatccgaatcagagatc
catgttatttatccacgcaatcccggaagtaattggaatatagaagctcgagtgggttct
atgccctctccatttcctctggacgtactaattatccatgttatacccgcttgcttctta
ccatgggtaataagggttatcactgacgctgttagttaa

>gi568815580f:24360729_24577559|GENSCAN_predicted_peptide_4|113_aa
MQGLQPDQECRLEGNAAAPRCGDGLLLFHAAIATGTQHLFLKSVMQDFHSTACEQPHTQR
PPAHTVLGPPPAQCTPAATERQPSWGISTKSVKSPRLPAGVGFKGLKDIPVAE

>gi568815580f:24360729_24577559|GENSCAN_predicted_CDS_4|342_bp
atgcagggcctgcagccagaccaggaatgtcgcctggagggcaatgcggcagcacccagg
tgtggggatgggctgctgctgttccacgctgccatcgccaccgggacccaacatctcttc
ctgaagtccgtgatgcaggattttcactccaccgcttgcgaacagccccacacccagcgc
cctcccgcacacaccgtcttggggcctcctccagcgcagtgcactcctgctgccacggaa
agacagccttcctggggcatcagcacaaagtctgtaaagtccccaaggcttcctgctggt
gtgggcttcaaaggcttgaaggatatcccagtggcagagtaa

>gi568815580f:24360729_24577559|GENSCAN_predicted_peptide_5|514_aa
MLEGFLEVICSSPSSALLKAATQRGCQVTFLREHRCTGADQKLEAKPPACWNGGLSQTGN
VASTCLLMIQPFLGSLTQRGSLSYRDNAAVLYPSQTLPKRAILSFNRRQRKHARLFAFDL
HDVNRQPSPRKSRSSGVTIMQIGQSKSAKNAETDLQMLPNSSVQQPSTVLIWSNGDIQWS
IKLHLDEKKEGKTTEAASNYQSHPNVGQPMPFTDKIMKDWIENWPSKCRVKCKRESGVRQ
IFEGHQILDNARNKAYHVTMTRTMTRPWDGPGVSRVSRGETLEPKRPAEESDDLSSPREH
SGPGVTENDLPDACAHNAKDFSERKSKKLKLDSWWLEDLRHVQVLASSHTSSSHQCYTAS
RNPRDDQQVHDGPNPHLGELTLEGIKQPFVAVEREEWKFDIPCDLYEMLTVIQVVIFCNT
KRKVDWLMEKMRDAALTVSSMHRDTPQKGPQSVSKEFPSGTSTGLISTDVWAGRSDVPQV
SVIINYDLPKKQNCTHTEFGDQVDMAGRLWPLTL

>gi568815580f:24360729_24577559|GENSCAN_predicted_CDS_5|1545_bp
atgctggaagggttcttagaggttatctgctccagtccctcctctgctcttctgaaagct
gccacccagagagggtgtcaagtgaccttcctacgagaacacagatgcacaggggcagat
caaaaattggaggccaagcctcctgcgtgctggaatgggggcttgtcccagacaggaaat
gtagcctctacatgcctgctgatgatacagccctttctgggctctctcactcagagggga
agtttatcctacagggataatgcagcagtgttgtacccgagccagacactgccaaagagg
gccattctttcattcaacaggagacagcgcaagcatgccaggctctttgcatttgacctt
catgatgtgaacaggcagccctctcccaggaagtccagaagctctggggtgactataatg
caaattggacaaagcaagagtgctaaaaatgcagagacagaccttcaaatgctcccaaat
tctagcgtccagcagccgtccacagtacttatatggagcaatggtgacatccagtggtca
attaagttacacctggatgagaaaaaagaggggaaaacaacagaagctgcttccaattat
caatcacatccaaatgtgggccaacccatgccatttaccgacaaaataatgaaggattgg
atagagaactggccttcgaagtgcagagtgaaatgcaagagagaatccggtgtcaggcag
atctttgaaggtcaccagattcttgataatgccagaaacaaggcctaccacgtgaccatg
acgagaacgatgaccaggccctgggacggccctggtgtgagcagagtaagcagaggtgaa
accttggagcccaaaaggccggcagaagaaagtgatgatttaagctcaccaagagagcat
tcaggtcctggggtaactgagaatgatctgccagatgcatgtgctcataatgcaaaggat
ttctctgaaaggaaaagcaagaaactgaagctggactcttggtggctggaagatttgcga
catgttcaggtacttgcctccagtcacacaagtagttctcatcagtgttacactgcctcg
cgaaatcctagagatgaccaacaagtacatgatggacccaatccacatcttggtgaattg
actctggaaggcatcaaacagccttttgtggcagtggaaagagaagagtggaaattcgac
atcccatgtgatctctacgaaatgctaactgttattcaggtggtcatcttctgtaacacc
aaaaggaaagttgactggctgatggagaaaatgagagatgctgctctcaccgtgtcctcg
atgcacagagacacacctcagaaagggccacagtccgtcagtaaggagttcccatccggc
accagcacagggctcatttccacagatgtctgggccgggaggtcagatgtccctcaggtg
tccgtcatcattaactatgacctgcccaaaaaacagaattgtactcacacagaatttgga
gatcaggtcgatatggctggaaggctgtggccattaactttgtaa