GENSCAN 1.0	Date run: 12-Oct-118	Time: 17:03:16

Sequence gi568815586r:10930409_11131335 : 200927 bp : 36.13% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Sngl +    220    654  435  0  0   78   33   483 0.814  37.82
 1.02 PlyA +   1892   1897    6                               1.05

 2.06 PlyA -   3437   3432    6                               1.05
 2.05 Term -  16015  15891  125  2  2   34   49    96 0.004  -2.13
 2.04 Intr -  29749  29643  107  0  2   81   81    88 0.042   6.34
 2.03 Intr -  43313  43247   67  0  1   72   93    46 0.005   0.54
 2.02 Intr -  44384  44340   45  0  0   91   94    39 0.679   2.26
 2.01 Init -  52705  52564  142  1  1   67   64    71 0.567   2.95
 2.00 Prom -  81934  81895   40                              -2.85

 3.00 Prom +  86592  86631   40                              -3.35
 3.01 Init +  87375  87401   27  2  0  107   94     6 0.665   2.33
 3.02 Intr +  96285  96383   99  2  0   53   40    92 0.016   0.29
 3.03 Intr + 118489 118701  213  0  0   97   36   127 0.223   6.39
 3.04 Intr + 133213 133326  114  0  0   80   76    42 0.057   1.92
 3.05 Intr + 141630 141702   73  2  1   51   99     4 0.008  -4.14
 3.06 Intr + 141755 142042  288  0  0   96   61    96 0.099   3.99
 3.07 Term + 159005 159189  185  0  2   77   36   127 0.545   3.12
 3.08 PlyA + 160345 160350    6                               1.05

 4.00 Prom + 161587 161626   40                              -5.35
 4.01 Init + 161820 162042  223  2  1   55   96   124 0.239   8.67
 4.02 Term + 174953 175155  203  0  2   45   44   128 0.270   0.67
 4.03 PlyA + 176969 176974    6                               1.05

 5.00 Prom + 177069 177108   40                              -8.05
 5.01 Sngl + 181212 182417 1206  2  0   62   43   428 0.992  31.27
 5.02 PlyA + 182654 182659    6                               1.05

 6.00 Prom + 183772 183811   40                              -3.45
 6.01 Init + 183899 184102  204  1  0   66   72    99 0.423   5.00
 6.02 Term + 199166 199294  129  1  0   57   42   104 0.009  -0.10
 6.03 PlyA + 199580 199585    6                              -0.45


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl +  22355  22774  420  1  0   65   54   150 0.901   5.38
S.002 Init +  27955  28041   87  0  0   58   78    76 0.877   4.29
S.003 Term + 147475 147573   99  0  0   83   50    98 0.839   2.65


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815586r:10930409_11131335|GENSCAN_predicted_peptide_1|144_aa
MSSALLVSTHTDGGDSEQFIDEERQGPPLGGQQSQPSAGDGNQNDGPQQGPPQQGGQQQQ
GPPPPQGKPQGPPQQGGHPPPPQGRPQGPPQQGGHPRPPRGRPQGPPQQGGHQQGPPPPP
PGKPQGPPPQGGRPQGPPQGQSPQ

>gi568815586r:10930409_11131335|GENSCAN_predicted_CDS_1|435_bp
atgagctcagctcttcttgtttcaactcacacagatggaggagactctgagcagttcata
gatgaggagcgtcagggaccacctttgggaggacagcaatctcaaccctctgctggtgat
gggaaccagaatgatggccctcagcagggaccaccccaacaaggaggccagcagcaacaa
ggtccaccacctcctcagggaaagccacaaggaccaccccaacagggaggccatccccct
cctcctcaaggaaggccacaaggaccaccccaacagggaggccatccccgtcctcctcga
ggaaggccacaaggaccaccccaacagggaggccatcagcaaggtcctcccccacctcct
cctggaaagccccagggaccacctccccaagggggccgcccacaaggacctccacagggg
cagtctcctcagtaa

>gi568815586r:10930409_11131335|GENSCAN_predicted_peptide_2|161_aa
MHACSNFEFCYIIWHNGQATWARLYICYRARFCFGFDLRQAALANSFTWSRTIAAELVWL
FGAAAEEYFACWNLLYLLKSGSFHSYLAKYEASSTIGLSAQSNEAVAVTTSLNLTFVKIT
NKLENLEEIDKFLDTYTLPAAGSQRPQTEGPAEAMAEEHKL

>gi568815586r:10930409_11131335|GENSCAN_predicted_CDS_2|486_bp
atgcatgcctgtagcaactttgaattctgttacatcatctggcacaatggccaagcaact
tgggccagactctatatctgctatagagcccgtttttgtttcgggtttgacttgagacaa
gcagcccttgcaaactcctttacctggtcaagaaccattgctgctgaactagtgtggttg
tttggagctgctgcagaagaatattttgcctgctggaacctgctgtatctactcaagagt
ggaagttttcacagttatttagcaaagtatgaagcctcttcaactattggcctatcagcc
caatccaatgaggctgttgctgtcaccacttcattaaatctgacatttgttaagatcacc
aacaaactagaaaacctagaagagatagataaattcctggacacatacaccctccctgct
gctggaagtcagagaccccaaacggagggaccagctgaagccatggcagaagaacataaa
ttgtga

>gi568815586r:10930409_11131335|GENSCAN_predicted_peptide_3|332_aa
MPSRNILFKTGYRMNADYQKLKSTLTNAFQDVLSSLSRAELLVEKNKVGEIGSLEQMKYA
EASNTQMLKCLVIAETLEPKILTSNLCEAKLNTVAYQCNNMTQSKPTLDTTRAKNITDKS
TLLNQECGKYVQPCCVRNSGAKSKNRWEIAKQLTRILFSGSREYPASSFCVTGTTVFVET
SSHHVAQGGLELLASIDIPNCAYQSSGIASKSHHTKPALGVFEGQMLPRFLTHVHPKVDL
ISLLLLPLPEHVIEMDKHGSWQDSHLLPDLQTLLEKVLEAKYTHLMTVMLSLSPHCEVAA
SRAIPDITTHCFTFLPVSISTRPCHFCLEFDF

>gi568815586r:10930409_11131335|GENSCAN_predicted_CDS_3|999_bp
atgccgagcagaaacatcctgtttaagacgggttatagaatgaatgcagactaccagaaa
cttaaatcaacactcacaaatgctttccaggatgtgctgtcttcactaagcagagcagag
cttctggtggagaaaaataaggttggagaaattggcagtcttgagcaaatgaaatatgct
gaggctagtaacacccagatgctgaaatgcttggttattgctgagacattagaaccaaaa
attcttacttctaatctatgtgaagccaaattaaacacagttgcataccaatgtaataat
atgacccagagtaaaccaactctggacaccaccagagcaaaaaacataactgataaatca
actctgctaaaccaagagtgtgggaaatatgtacaaccttgttgtgtcaggaattcagga
gccaaaagcaaaaacagatgggaaattgcaaagcaactgactcgcatattgttttcaggt
tcaagggagtatcctgcctcatccttctgtgtaactgggactacagtttttgtagagaca
agctctcaccatgtagcccagggtggtctggaactcctggcctcaatagatattcccaac
tgtgcctaccaaagttccgggattgcaagcaagagccatcataccaagcctgcactggga
gtttttgaaggtcagatgctacctagatttttgactcatgtacatcccaaggtggatcta
atcagtttgctgttattacctcttcctgaacatgtaattgaaatggacaaacatggcagc
tggcaggactctcaccttcttcctgacctgcagacccttctggaaaaagtgctggaagcc
aagtacacgcatctgatgaccgtcatgctgtctctctcacctcactgtgaagtggctgcc
agcagagccataccagacatcaccacacattgtttcacatttcttcctgtctcaatttcc
acacgtccttgccatttttgtcttgaatttgacttctaa

>gi568815586r:10930409_11131335|GENSCAN_predicted_peptide_4|141_aa
MSEQTKKIFLNAGVVSGIGSCRWVRGLADFKREPLTFTVSVAALKDGVDPKSEQQQGLLR
REKGQSFHRVKGNPGLDLNIYVYLIPEFAGMSLFLFKFCDQCQTGKHLNMPVDEINAVFM
ENMMISKTAQINSYSNTTSLL

>gi568815586r:10930409_11131335|GENSCAN_predicted_CDS_4|426_bp
atgtctgaacagacaaaaaaaatttttttaaatgctggtgttgtgtccggaattggttcc
tgcaggtgggttcgtggtctcgctgacttcaaaagggagccactgaccttcacggtgagt
gttgctgctcttaaagatggtgtggacccaaagagtgagcaacagcaaggtttattgaga
agagagaaaggacaaagcttccacagagtgaaaggcaacccaggtcttgaccttaacatc
tatgtgtacctgattcctgaatttgcaggaatgtccttgttcctttttaaattctgtgac
caatgtcaaacaggaaagcatctcaatatgccagtggatgaaatcaatgctgtctttatg
gaaaacatgatgatttccaaaacagctcaaattaactcctattcaaacacaacgtccttg
ctgtaa

>gi568815586r:10930409_11131335|GENSCAN_predicted_peptide_5|401_aa
MYQNLWDTAKAVFRGKFIALNAHRRKWERSKVDTLASQLKELEKQEQTNLKASRRQEITK
VRAQLKEIETPKTLQKINESRSWFFEKFNKIERQLARLVKKKRENNPIDTIKNNKGDITT
DFREIQTIIREYYKHLYANTLENLEEMDKILDTYNIPSLNQEEVKSLNRPITSSETETVI
NSLATKKSPGTDIFTTKFYQRYKEEMVPFFLKLFKTLEKEGLLLNSFYEASIILIPKPDR
DTAKRENFRPISLMNIDAKILNKILASQIQQHIKRLIHQDQVVFNPGMQGWFNICKSINI
IHHINRTNDKNHMIISTDAEKAFDKIQHAFMLKTLKKLGTDGMYLKILSAIYDKPTANIL
NGQKREAFPLKIGTKQGCHLSPLLFNIVLEILARTIRKRKK

>gi568815586r:10930409_11131335|GENSCAN_predicted_CDS_5|1206_bp
atgtaccagaatctctgggacacagctaaagcagtgtttagagggaaatttatagcacta
aatgcccacaggagaaagtgggaaagatctaaagttgacaccctagcatcacaattaaaa
gaactggagaagcaagagcaaacaaatttaaaagctagcagaagacaagagataactaag
gtcagagcacaactgaaggagatagaaacacctaaaacccttcagaaaatcaatgaatcc
aggagctggttttttgaaaagttcaacaaaatagaaagacagctagccagactagtaaag
aagaaaagagagaataatccaatagacacaataaaaaataataaaggagatattaccact
gacttcagagaaatacaaactatcatcagagaatactataaacacctctatgcaaatacg
ctagaaaatttagaagaaatggataaaatactggacacatacaacatcccaagtctaaac
caggaagaagtcaaatccctgaatagaccaataacaagttctgaaactgagacagtaatt
aatagcctagcaaccaaaaaaagtccaggaacagacatattcacaaccaaattctaccag
aggtacaaagaggagatggtaccattctttctgaaactattcaaaacactggaaaaagag
ggactactccttaactcattttatgaggccagcatcatcctgattccaaaacctgataga
gacacagcaaaaagagaaaattttaggccaatatccttgatgaacatcgatgcgaaaatc
ctcaataaaatactggcaagccaaatccagcagcatataaaaaggcttatccaccaagat
caagtcgtcttcaaccctgggatgcaaggctggttcaacatatgcaaatcaataaacata
atccatcacataaacagaaccaatgacaaaaaccacatgattatctcaacagatgcagaa
aaggcctttgataaaattcaacatgccttcatgctaaaaacactcaagaaactaggtact
gatggaatgtatctcaaaatattaagtgctatttatgacaaacccacagccaatatactg
aatgggcaaaaacgggaagcattccctttgaaaatcggcacaaaacaaggatgccatctc
tcaccactcctgttcaacatagtattggaaattctggccaggacaatcaggaagagaaag
aaataa

>gi568815586r:10930409_11131335|GENSCAN_predicted_peptide_6|110_aa
MEYYAAIKKDEFMSFAGTWMKLETIILSKLTQEQKTKHHIITHNWELNNENTWTQGGHRE
RHTTGPFRMGYRMNADYHKLKSTLTNAFQDVLSSLSRAELLVLFVGLVIW

>gi568815586r:10930409_11131335|GENSCAN_predicted_CDS_6|333_bp
atggaatactatgcagccataaaaaaggatgagttcatgtcctttgcagggacctggatg
aagctggaaaccatcattctcagcaaactaacacaggaacagaaaaccaaacaccacatt
atcactcataattgggagctaaacaatgagaacacatggacacagggaggacacagggaa
cgtcacacaactgggccttttaggatgggttatcgaatgaatgcagactaccataaactt
aaatcaacactcacaaatgctttccaggatgtgctatcttcactgagcagagcagagctt
ctggtactttttgtggggctagtgatttggtga