GENSCAN 1.0 Date run: 7-Nov-116 Time: 22:53:31 Sequence gi568815594f:176220077_176428327 : 208251 bp : 38.23% C+G : Isochore 1 ( 0 - 43 C+G%) Parameter matrix: HumanIso.smat Predicted genes/exons: Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr.. ----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------ 1.08 Intr - 1213 1124 90 2 0 102 36 59 0.088 1.15 1.07 Intr - 1524 1374 151 0 1 40 88 96 0.251 3.61 1.06 Intr - 2344 2237 108 1 0 42 101 53 0.225 1.56 1.05 Intr - 5265 5186 80 1 2 106 90 30 0.303 3.35 1.04 Intr - 17395 17218 178 1 1 50 96 124 0.237 7.97 1.03 Intr - 29530 29400 131 2 2 64 90 80 0.029 5.29 1.02 Intr - 49121 48837 285 0 0 96 95 342 0.987 32.09 1.01 Init - 54230 54137 94 2 1 84 81 25 0.375 1.99 1.00 Prom - 59813 59774 40 -4.65 2.08 PlyA - 60323 60318 6 1.05 2.07 Term - 75470 75042 429 2 0 75 36 216 0.221 9.42 2.06 Intr - 80006 79777 230 0 2 66 119 31 0.465 0.67 2.05 Intr - 100141 99909 233 0 2 58 62 304 0.615 21.29 2.04 Intr - 100608 100434 175 1 1 63 53 142 0.741 6.28 2.03 Intr - 101178 101087 92 2 2 82 81 6 0.150 -1.98 2.02 Intr - 113052 112921 132 2 0 83 103 16 0.221 1.44 2.01 Init - 115252 115161 92 1 2 76 87 24 0.261 1.11 2.00 Prom - 118197 118158 40 -3.25 3.00 Prom + 124014 124053 40 -6.35 3.01 Sngl + 124322 124954 633 1 0 72 47 536 0.991 43.83 3.02 PlyA + 126035 126040 6 1.05 4.00 Prom + 130534 130573 40 -6.05 4.01 Init + 136299 136315 17 2 2 41 99 33 0.155 -1.14 4.02 Intr + 147622 147780 159 1 0 104 91 65 0.817 6.58 4.03 Intr + 148747 148891 145 1 1 69 37 136 0.391 5.96 4.04 Intr + 157472 157519 48 1 0 75 87 73 0.106 3.86 4.05 Term + 160601 160615 15 1 0 122 49 15 0.056 -1.74 4.06 PlyA + 162913 162918 6 1.05 5.00 Prom + 173844 173883 40 -6.55 5.01 Init + 180521 181005 485 1 2 50 116 323 0.411 26.12 5.02 Intr + 187552 187715 164 1 2 80 76 7 0.219 -2.60 5.03 Term + 189316 189446 131 2 2 82 38 95 0.224 1.26 5.04 PlyA + 192326 192331 6 1.05 Suboptimal exons with probability > 0.800 Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr.. ----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------ Predicted peptide sequence(s): Predicted coding sequence(s): >gi568815594f:176220077_176428327|GENSCAN_predicted_peptide_1|373_aa MTLLLHITVKSILLSDQLLQVQLTRSRCSNEGPAVQEHPGREPGTFETWIQLKTAADSSA AMSVLEENRPFAQQLSNVYFTILSLFCFKLFVKISLAILSHFYIVKGNRKEAARIAAEFY GVTQGQAPMGEELKSLITLSGRADIQQICSPNQGEQRVPLRLQVGIKNSRSICTYDTWLS QTKNVNQTMSADIAVEMNCIKQVLTKRRLVSIEECSSKRKASWGILTSQGSWADRSPLHE AASQGRLLALRTLLSQGYNVNAVTLDHVTPLHEACLGDHVACARTLLEAGANVNAITIDG VTPLFNACSQGSPSCAELLLEYGAKAQLESCLPSPTHEAASKGHHECLDILISWGIDVDQ EIPHLGTPLYVAX >gi568815594f:176220077_176428327|GENSCAN_predicted_CDS_1|1119_bp atgactttattacttcatattactgtcaaatctatattactgtcagatcagctacttcag gtgcaactaactagatccaggtgctccaatgaaggaccagctgttcaggagcatcccgga cgagagccaggcacatttgagacttggatccaactaaagaccgccgcagattcttctgca gcaatgtcggtgttagaagaaaatcggccgtttgctcaacaattatccaatgtctacttt acaatactttcgctgttctgttttaagctttttgtgaaaatcagccttgccatcctcagt catttctacatagtgaaaggcaaccgcaaggaagcggcaaggatagcagctgaattttat ggagtaacccaaggacaagcaccaatgggagaagaactgaagtctcttattaccctcagt ggtagagcagacattcagcagatctgctctcccaatcagggagagcagagagtcccacta agactgcaggttggaataaagaacagcaggagcatttgcacttatgacacctggttgtca cagacaaaaaacgtcaaccaaactatgtccgcagatattgctgttgaaatgaactgcatt aagcaggtcctcacgaaaagaaggctagtgagtatagaggaatgttcttctaaacgaaaa gctagctggggtattctgaccagtcaaggttcctgggcagatcgatcaccactacatgaa gcagcaagtcaaggtcgccttcttgctctgagaacattattatcacagggttataatgta aatgcagtaaccttagaccatgtcaccccattgcacgaagcctgccttggagatcacgtg gcatgtgccagaactctgctggaagcaggagctaatgtaaatgcaatcacgatagatggc gtgactccgttattcaacgcatgctcccaaggcagtccaagctgtgcagagctgcttctg gagtatggtgccaaagcccagctggagtcatgtcttccatccccaacgcatgaggccgcc agtaaaggtcaccatgaatgtcttgacatcctgatatcctggggcatagatgttgaccaa gaaattcctcatttgggaactcctctctatgtagcttnn >gi568815594f:176220077_176428327|GENSCAN_predicted_peptide_2|460_aa MAVKLIGCNRGSKLFKQGKKMANTKLKTAERCLFPTILNRYTSGMCINYAHEKGTLQSSF KLEVYLDIKVYLLKWADNGSADVHPRSIRTISNKHQYSNLKKKKKEPPGNPTEARPRARR QRLEGLACGPRAAPDAREAPAQAGGGAGSAVVLLPHWPGVGGGNMIRETCSRTGTLLSLK AVVMKQPKVSAAITLSEKANSEFARDSTVFIAIVSHESGLHTHTQAPVPAADRLPAIRAV CARLHPGEINSLVAHTKPVWWSLHMDAREIWCHDSDRGTSLGRSIPCPPALCCMRKIHLR PQVLRPTSPKNISPILNPFCLAQGVFFLCVSSTYMCLPANWTGTCTLVFLTPKIQFANRT EELPVPLMTPTRQKRVIPLIPLLVSLRLSAFTIALGTGIAGISTSVTTFRSLSNDFSASI TDVSQTLSVLQAQVDSLAAVVLQNRRGLDLLLKKEDSVYS >gi568815594f:176220077_176428327|GENSCAN_predicted_CDS_2|1383_bp atggcagtaaagctgataggatgcaacagaggtagtaaacttttcaagcaaggcaagaaa atggctaacacaaaactgaagaccgcagaaaggtgcctatttccaactatactcaacaga tacacaagtggaatgtgtataaattatgcacatgaaaagggaacacttcaaagctccttc aagcttgaggtttatttggatataaaggtatacttattaaagtgggctgacaatggcagt gctgatgtccaccccaggtctattcgaacaatatctaacaaacatcagtacagtaattta aaaaaaaaaaaaaaagagccgccaggaaaccccacggaagcccgacccagagcgcggcgg cagcgcctggagggcctcgcatgcggaccacgagcggcaccggacgcgcgggaggcgcca gcccaggcgggcggcggcgccggctctgctgttgtgttgctccctcattggccaggcgtg ggtggagggaacatgatccgcgagacgtgcagccgcaccgggacgctcctgtctttgaag gcggtggtgatgaagcagccgaaggtgagcgccgccatcacgctcagcgagaaggcgaac agtgagttcgcccgcgacagcaccgtgttcatcgcgatcgtctcccacgagtccggactc cacacgcacacccaggctcccgttccggcggcggaccggctccctgcgatccgcgccgtc tgcgcccgcctgcacccaggtgaaataaacagccttgttgctcacacaaagcctgtttgg tggtctcttcacatggacgcacgtgaaatttggtgccatgactcagatcgggggacctcc cttgggagatcaatcccctgtcctcctgctctttgctgcatgagaaagatccacctacga cctcaggtcctcagaccgaccagcccaaagaacatctcaccaattttaaatccgttttgc ctcgcacaaggtgtcttcttcctctgtgtatcctctacctacatgtgtctacctgctaat tggacaggcacatgcacactagttttccttactcccaaaattcaatttgcaaataggacc gaagagctccctgttcccctcatgacaccgacacgacaaaaaagagttattccactaatt cccttgcttgtcagtttaagactttctgccttcactattgctctcggtactggaatagca ggcatttcaacctctgtcacgaccttccgtagcctctctaatgacttctctgctagcatc acagacgtatcacaaactttatcagtcctccaggcccaagttgactctttagctgcagtt gtcctccaaaaccgccgaggccttgacttactgctgaaaaaggaggactctgtatattct taa >gi568815594f:176220077_176428327|GENSCAN_predicted_peptide_3|210_aa MGQVWALVRSTLEPFHTDDEEKGEYNEVTEEVTEQVCLPAKAKVAKEGEVYPYPSAPPPY FEEKEWPDPPDLSFLEDAGQKVIAPVTVQAAPQAIALSSIQAGIQQARREGDLEAWQFPI RIHPPDQQGNIIATFEPFPFKLLKESKQAINQYGQGSPFVMELLKNVAVSSQMIPTDWDA LAQACLTLTQFLQFKTLWADEVSIQAACNA >gi568815594f:176220077_176428327|GENSCAN_predicted_CDS_3|633_bp atgggacaagtgtgggctctggttcgttccaccttggaaccttttcacactgatgatgag gagaaaggagagtataatgaagtaacagaagaagtaacagagcaagtttgtttgcctgct aaagctaaagtggcaaaggagggagaggtttatccctatccttctgcaccccctccttat tttgaagaaaaagagtggcctgaccctccagatctttcttttctggaggatgctgggcaa aaagtgattgccccagtgactgttcaagcagcgcctcaagcgatcgctctcagttctatt caggcaggaattcagcaagctagaagagagggtgatttagaggcttggcagttccctatt agaatacaccccccagatcaacagggaaatattatagctacatttgagccttttcctttt aaattactcaaagaatctaaacaagctattaatcaatatggacaaggttctccttttgta atggaactgttaaagaatgttgctgtttccagtcagatgattcctactgactgggatgct cttgctcaagcttgtctaactcttactcagttcttacaatttaaaaccttgtgggcagat gaagtttccattcaggctgcttgtaatgcctag >gi568815594f:176220077_176428327|GENSCAN_predicted_peptide_4|127_aa MLAVVRGCDCSKCLVESFCFASTALRISVGRFYFALCSLTDKPVANTYGWELAVANVARP AMEESTIPVPTAEVLSTILAVEAPTLLQSMTSKMWPETEMPAWPQCQICKARLVDCTDVA RVKKGTG >gi568815594f:176220077_176428327|GENSCAN_predicted_CDS_4|384_bp atgctggcagttgtcagggggtgtgactgtagcaaatgtttggtggaatctttttgcttt gcttccacagctttacgcatttcagttgggaggttttattttgcgctgtgcagtttgact gacaagccagtagctaacacttatgggtgggagctggcagtggccaatgtggccaggcct gcgatggaggagagcacaattccagtgcctactgctgaggtgctttctacgattctggct gtggaggcccctaccctgctccagagcatgacctccaaaatgtggcctgagactgaaatg cctgcatggccacagtgccagatttgtaaagcccgtttagttgattgcacagacgtggcc agagtcaagaagggcactgggtga >gi568815594f:176220077_176428327|GENSCAN_predicted_peptide_5|259_aa MLFPTLMDDFEDFKTSREEVTADVMEIARELELEVEPEEVTELLQSQLLLVDEQRKWFLK MEFTPGENAVKIVEMTTKDLEYYIYLVNEAAARVNRMASTFEEVLLWVKCYQTALHATRK IFCEKMSQLMQQPLLSYFKKLPQPPQPSATITVVSQEPSTSSLQAAFDIVRALFKTFSLP GFQNTSFSVLLLLLEFLFSVSFALLLTFPTFVETTGGDTEFSKLPLIDVGESKISAIDCL FFGKDGRHSDFMCEKYSMS >gi568815594f:176220077_176428327|GENSCAN_predicted_CDS_5|780_bp atgttgtttccaaccctcatggatgactttgaggactttaagacttcaagggaggaagta actgcagatgtgatggaaatagcaagagaactagaattagaagtagaacccgaagaagtg actgaattgctgcaatctcaattgctgcttgtggatgaacaaaggaagtggtttcttaag atggaatttactcctggtgaaaatgctgtgaaaattgttgaaatgacaacaaaggattta gaatattacatatacttagttaatgaagcagcagcaagggttaacaggatggcctccact tttgaagaagttctactgtgggtaaaatgctatcaaacagcattacatgccacaagaaaa atcttctgtgaaaagatgagtcagttgatgcagcaacctttattgtcttattttaagaaa ttgccacaaccaccccagccttcagcaactatcacagtagttagtcaggagccatcaact tcaagcctacaagcagcatttgacatagtgcgtgcgctttttaaaacattttctttacct ggcttccagaacacttctttctctgtcctcctactgctccttgaattcctcttttcagtc tcttttgctcttctcctcaccttcccaacatttgtggaaaccacaggaggggacacagaa ttttccaaattgcctttaattgatgttggagaatctaaaatcagtgccatagattgtctc ttctttggtaaagatggcagacattcagattttatgtgcgaaaagtacagcatgagctaa