GENSCAN 1.0	Date run:  6-Nov-116	Time: 19:44:10

Sequence gi568815589f:117604473_117814645 : 210173 bp : 39.15% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.05 PlyA -    755    750    6                               1.05
 1.04 Term -  37718  37464  255  2  0   12   45   223 0.379   5.00
 1.03 Intr -  43652  43514  139  1  1   22   99   151 0.747   9.15
 1.02 Intr -  49206  49082  125  0  2   33  105   109 0.792   5.56
 1.01 Init -  49477  49373  105  1  0   77   73    59 0.787   3.57
 1.00 Prom -  53575  53536   40                              -4.15

 2.02 PlyA -  53758  53753    6                              -0.45
 2.01 Sngl -  55027  53783 1245  1  0   91   39   404 0.968  31.37
 2.00 Prom -  56411  56372   40                              -4.85

 3.03 PlyA -  56695  56690    6                               1.05
 3.02 Term -  69048  68924  125  1  2  -22   44   224 0.912   4.57
 3.01 Init -  71513  71438   76  2  1   83    5    87 0.667   1.20
 3.00 Prom -  79924  79885   40                              -3.85

 4.00 Prom +  82655  82694   40                              -6.25
 4.01 Init +  87361  87420   60  0  0   88   62    35 0.153   2.20
 4.02 Intr +  99849  99983  135  2  0   77   45   171 0.850  11.54
 4.03 Intr + 104091 104257  167  2  2   74   95    90 0.992   6.14
 4.04 Intr + 107917 110134 2218  1  1   95   29  1184 0.072  99.57
 4.05 Term + 125312 125419  108  1  0   97   48   121 0.781   6.53
 4.06 PlyA + 125963 125968    6                               1.05

 5.05 PlyA - 127589 127584    6                               1.05
 5.04 Term - 133998 133864  135  0  0  111   37   130 0.953   7.24
 5.03 Intr - 135752 135616  137  0  2   50   92    62 0.075   2.17
 5.02 Intr - 144355 144206  150  2  0   37   94   131 0.896   7.81
 5.01 Init - 144935 144896   40  2  1   88   97     6 0.528   1.90
 5.00 Prom - 155360 155321   40                              -4.55

 6.02 PlyA - 157330 157325    6                               1.05
 6.01 Sngl - 169495 168785  711  1  0   72   43   210 0.802  10.87
 6.00 Prom - 172156 172117   40                              -6.15

 7.03 PlyA - 173080 173075    6                               1.05
 7.02 Term - 182574 182131  444  0  0   78   45   230 0.018  11.95
 7.01 Intr - 194614 194514  101  2  2  125   91    12 0.014   4.11

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term + 107917 110176 2260  1  1   95   49  1194 0.903 100.55
S.002 Init + 179948 180021   74  1  2   59  106    71 0.946   6.59
S.003 Intr + 182174 182353  180  2  0   65  109   149 0.874  12.76


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815589f:117604473_117814645|GENSCAN_predicted_peptide_1|207_aa
MDKSCVNGCGREILQLELSLIMNSQTGKLGKCGFYINDPQLQETVSLCSGTLGNRHGDIV
DCHSEGMEKDATVTSIWSQPPYCEGIQQTALWRNPDDQELGPFTAVIMDLTVEPPGRQIP
QPQVCSFTPEASETTNPPGGRNNSRRTALRAVTLTAKVRSFTPEPARLRTPPEGRNSKHI
RTSEGTNSGHAAFKNCNSHRKGPWLHS

>gi568815589f:117604473_117814645|GENSCAN_predicted_CDS_1|624_bp
atggacaagtcctgtgtcaacgggtgtggcagggagatactacaacttgaattatcgctc
ataatgaattcacagactggtaaattgggaaaatgtggattttatatcaatgatcctcaa
ctgcaggagactgtgtcactctgctcaggaacacttggcaatagacatggagacattgtt
gattgtcacagtgaggggatggaaaaggatgctacagtcactagtatctggagccagcca
ccatactgtgaaggaattcagcaaacagccctatggagaaatccagatgaccaggaactg
gggccattcacagcagtcatcatggacctgacagttgagccacctgggagacagataccc
caaccacaggtctgcagcttcactcctgaagccagcgagaccactaacccaccgggagga
aggaacaactccagacgcacagccttaagagctgtaacactcactgcgaaggtccgcagc
ttcactcctgagccagcgagactacgaaccccaccagaaggaagaaactccaaacacatc
cgaacatcagaaggaacaaactccggacacgccgcctttaagaactgcaacagtcaccgc
aagggtccgtggcttcattcttga

>gi568815589f:117604473_117814645|GENSCAN_predicted_peptide_2|414_aa
MTVYLENPIVSAQNLLKLISSFSKVSGYKINVQKSQVFLYTNNRQTESQTMSEFPFRIAS
KRIKYLGIQLTRDVKDLFKENYKPLLKEIKEDTNKWKNIPCSWVGRSNIMKMAILPKVIY
RFNAIPIKLPMTFFTELEKTTLKFIWNQKIALIAKSILSQRNKAGGITLPDFKLHYKATV
TKTAWYWYQNRDIDQWNRTEPSEIIPHIYNYLIFDKPDKNKKRGKDSLFNKWCWENWLAI
CRKLKLDPFLTPYTKINSRWIKDLNVRAKAIKTLEENLGNTIQDIGTGKDFMSKTPKAMA
TEAKIDKWDLIKLKSFCTAKETTIRVNRQPTEWEKIFSICSSDKGLISRIHKELKPIYKK
KNKQPHQKVDEGYEQTLLKRRHLCSQQTHEKMLIITGHQRNANQNHNEIPSHAS

>gi568815589f:117604473_117814645|GENSCAN_predicted_CDS_2|1245_bp
atgactgtatatttagaaaatcccatcgtctcagcccaaaatctccttaagctgataagc
agcttcagcaaagtctcaggatacaaaatcaatgtacaaaaatcacaagtgttcttatac
accaataacagacaaacagagagccaaaccatgagtgaattcccattcagaattgcttca
aagagaataaaatacctaggaatccaacttacaagggatgtgaaggacctcttcaaggag
aactacaaaccactgctcaaggaaataaaagaggacacaaacaaatggaagaacattcca
tgctcatgggtaggaagaagcaatatcatgaaaatggccatactgcccaaggtaatttat
agattcaatgccatccccatcaagctaccaatgactttcttcacagaattggaaaaaact
actttaaagttcatatggaaccaaaaaatagccctcattgccaagtcaatcctaagccaa
aggaacaaagctggaggcattacgctacctgacttcaaactacactacaaggctacagta
accaaaacagcatggtactggtaccaaaacagagatatagaccaatggaacagaacagag
ccctcagaaataataccacatatatacaactatctgatctttgacaaacctgacaaaaac
aagaaacggggaaaggattccctatttaacaaatggtgctgggaaaactggctagccata
tgtagaaagctgaaactggatcccttccttacaccttatacaaaaattaattcaagatgg
attaaagacttaaatgttagagctaaagccataaaaaccctagaagaaaacctaggcaat
accattcaggacataggcacgggcaaggacttcatgtctaaaacaccaaaagcaatggca
acagaagccaaaattgacaaatgggatctaattaaactaaagagcttctgcacagcaaaa
gaaactaccatcagagtgaataggcaacctacagaatgggagaaaattttctcaatctgc
tcatctgacaaagggctaatatccagaatccacaaagaactcaaaccaatttacaagaaa
aaaaacaaacagccccatcaaaaagtggacgaaggatatgaacagacacttctcaaaaga
agacatttatgcagccaacagacacatgaaaaaatgctcatcatcactggccaccagaga
aatgcaaatcaaaaccacaatgagataccatctcatgccagttag

>gi568815589f:117604473_117814645|GENSCAN_predicted_peptide_3|66_aa
MAEGKEEASTFFTRQQEREREIEGGREKEKSKKGETNLKKKEEKEEEEEEAAEEKRRKSD
EADAGN

>gi568815589f:117604473_117814645|GENSCAN_predicted_CDS_3|201_bp
atggcagaaggcaaagaggaagcaagcaccttcttcacaaggcagcaggagagagagaga
gagattgaagggggaagagaaaaggagaaaagcaagaaaggggaaacaaacttgaagaag
aaggaggagaaggaggaggaggaggaggaagcagcagaggagaaaagaagaaaaagtgat
gaagcagatgctggaaattaa

>gi568815589f:117604473_117814645|GENSCAN_predicted_peptide_4|895_aa
MPTRKRIHKCCIGIVHNSQKPRTALNTPIAVGRLEEEKTPVPQKLLGQTVIASHAFTGPL
LLTEAVVPNITYQCMELNFYKIPDNLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLS
RCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPI
GHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNL
SLDLSLNPMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNE
GNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIERVKDF
SYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDLPSLEFLDLSRNGLS
FKGCCSQSDFGTTSLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSL
RNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQC
QLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQH
FPSSLAFLNLTQNDFACTCEHQSFLQWIKDQRQLLVEVERMECATPSDKQGMPVLSLNIT
CQMNKTIIGVSVLSVLVVSVVAVLVYKFYFHLMLLAGCIKYGRGENIYDAFVIYSSQDED
WVRNELVKNLEEGVPPFQLCLHYRDFIPGVAIAANIIHEGFHKSRKVIVVVSQHFIQSRW
CIFEYEIAQTWQFLSSRAGIIFIVLQKVEKTLLRQQVELYRLLSRNTYLEWEDSVLGRHI
FWRRLRKALLDGKSWNPEGTQRLSLITYQVVFDQTPEGKEKQSRPVVMKGKTNLF

>gi568815589f:117604473_117814645|GENSCAN_predicted_CDS_4|2688_bp
atgcccacacgaaaacgtattcacaaatgttgtatcggtattgttcataatagccaaaag
cccagaactgctttgaatacaccaattgctgtggggcggctcgaggaagagaagacacca
gtgcctcagaaactgctcggtcagacggtgatagcgagccacgcattcacagggccactg
ctgctcacagaagcagtggttcctaatattacttatcaatgcatggagctgaatttctac
aaaatccccgacaacctccccttctcaaccaagaacctggacctgagctttaatcccctg
aggcatttaggcagctatagcttcttcagtttcccagaactgcaggtgctggatttatcc
aggtgtgaaatccagacaattgaagatggggcatatcagagcctaagccacctctctacc
ttaatattgacaggaaaccccatccagagtttagccctgggagccttttctggactatca
agtttacagaagctggtggctgtggagacaaatctagcatctctagagaacttccccatt
ggacatctcaaaactttgaaagaacttaatgtggctcacaatcttatccaatctttcaaa
ttacctgagtatttttctaatctgaccaatctagagcacttggacctttccagcaacaag
attcaaagtatttattgcacagacttgcgggttctacatcaaatgcccctactcaatctc
tctttagacctgtccctgaaccctatgaactttatccaaccaggtgcatttaaagaaatt
aggcttcataagctgactttaagaaataattttgatagtttaaatgtaatgaaaacttgt
attcaaggtctggctggtttagaagtccatcgtttggttctgggagaatttagaaatgaa
ggaaacttggaaaagtttgacaaatctgctctagagggcctgtgcaatttgaccattgaa
gaattccgattagcatacttagactactacctcgatgatattattgacttatttaattgt
ttgacaaatgtttcttcattttccctggtgagtgtgactattgaaagggtaaaagacttt
tcttataatttcggatggcaacatttagaattagttaactgtaaatttggacagtttccc
acattgaaactcaaatctctcaaaaggcttactttcacttccaacaaaggtgggaatgct
ttttcagaagttgatctaccaagccttgagtttctagatctcagtagaaatggcttgagt
ttcaaaggttgctgttctcaaagtgattttgggacaaccagcctaaagtatttagatctg
agcttcaatggtgttattaccatgagttcaaacttcttgggcttagaacaactagaacat
ctggatttccagcattccaatttgaaacaaatgagtgagttttcagtattcctatcactc
agaaacctcatttaccttgacatttctcatactcacaccagagttgctttcaatggcatc
ttcaatggcttgtccagtctcgaagtcttgaaaatggctggcaattctttccaggaaaac
ttccttccagatatcttcacagagctgagaaacttgaccttcctggacctctctcagtgt
caactggagcagttgtctccaacagcatttaactcactctccagtcttcaggtactaaat
atgagccacaacaacttcttttcattggatacgtttccttataagtgtctgaactccctc
caggttcttgattacagtctcaatcacataatgacttccaaaaaacaggaactacagcat
tttccaagtagtctagctttcttaaatcttactcagaatgactttgcttgtacttgtgaa
caccagagtttcctgcaatggatcaaggaccagaggcagctcttggtggaagttgaacga
atggaatgtgcaacaccttcagataagcagggcatgcctgtgctgagtttgaatatcacc
tgtcagatgaataagaccatcattggtgtgtcggtcctcagtgtgcttgtagtatctgtt
gtagcagttctggtctataagttctattttcacctgatgcttcttgctggctgcataaag
tatggtagaggtgaaaacatctatgatgcctttgttatctactcaagccaggatgaggac
tgggtaaggaatgagctagtaaagaatttagaagaaggggtgcctccatttcagctctgc
cttcactacagagactttattcccggtgtggccattgctgccaacatcatccatgaaggt
ttccataaaagccgaaaggtgattgttgtggtgtcccagcacttcatccagagccgctgg
tgtatctttgaatatgagattgctcagacctggcagtttctgagcagtcgtgctggtatc
atcttcattgtcctgcagaaggtggagaagaccctgctcaggcagcaggtggagctgtac
cgccttctcagcaggaacacttacctggagtgggaggacagtgtcctggggcggcacatc
ttctggagacgactcagaaaagccctgctggatggtaaatcatggaatccagaaggaaca
caaaggctcagtctcatcacgtatcaggttgtatttgaccaaacaccagagggaaaagag
aaacaatctaggcccgtggttatgaaaggaaaaacgaacctcttctga

>gi568815589f:117604473_117814645|GENSCAN_predicted_peptide_5|153_aa
MAAGLSYAVFMIVRADEGEIESTSSFSSCLRLPQGKPIFQVSAHKSIRVSVISQRMEDLI
CYPECIFLLPCANARALCKDLTIQVIMEGNLTYFIAIVTEIASLDAVLAELGTMEGFDVE
SDMIIDMHLEVYSIGYKQDGVEETSLENMQLLQ

>gi568815589f:117604473_117814645|GENSCAN_predicted_CDS_5|462_bp
atggcggcaggtctttcctatgctgttttcatgatagtaagggctgatgaaggagaaatt
gaaagcaccagcagtttcagttcctgcttaaggctacctcaaggaaagcccattttccag
gtttcagctcataagagcatcagagtatctgtgatttcccagaggatggaggacctcatc
tgctatccagagtgcatcttcctcctcccctgtgcaaacgcacgtgctctttgcaaagat
ctaacaattcaagtcataatggaagggaatctcacctattttattgccatagttaccgag
attgcaagtttagatgctgtattagcagaattggggaccatggaaggatttgatgtggaa
agtgacatgattattgatatgcatttggaagtttactctattggctataagcaagatgga
gtggaggaaacaagcctagaaaatatgcagctactacagtag

>gi568815589f:117604473_117814645|GENSCAN_predicted_peptide_6|236_aa
MEGGKERKRGRKRERKKEKERKKEREKGNKEKKRKKERKRKKKERERKKERKKRRKEGKE
EGRKKGRKEGKKERKGRKGREGERDRGREGGKERKRGRERKKRKKKEREKKKKRKKEKER
KKEERKKERKKERKKERERGKRRNRKQESWGRLRREKTIERKKEMERSLAEGPQDSPSYL
GVQGSLTGPQIQTVDLSVVLFAPLSGHPCLGQSFYKELKPARMQSQGRWGGWNSLP

>gi568815589f:117604473_117814645|GENSCAN_predicted_CDS_6|711_bp
atggagggagggaaagaaaggaagagaggaagaaagagagaaagaaagaaagagaaagag
agaaagaaagaaagagagaaaggaaacaaggagaaaaagagaaagaaagaaagaaagaga
aagaagaaagagagagaaagaaagaaagagagaaagaaaagaaggaaggaagggaaggag
gaaggaaggaagaaaggaaggaaggaaggaaagaaggaaaggaaaggaagaaaaggaagg
gagggagagagggatagagggagggagggagggaaagaaaggaagagaggaagagaaaga
aagaaaagaaagaagaaagaaagagaaaagaaaaagaaaaggaagaaagagaaagaaaga
aagaaagaagaaagaaagaaagaaagaaagaaagaaaggaagaaagaaagagagagaggg
aaaagaagaaatagaaaacaggaaagctggggaagactaaggagggagaagacaatcgag
agaaagaaagaaatggagaggtccctggcagaaggaccccaggattcccccagttacttg
ggggttcagggatcactgactggcccccaaatccagactgtggacctctctgtggtacta
tttgcccctctctctggccatccttgccttggacagtctttctataaggagctcaagcct
gccaggatgcagagccagggtcgctggggaggctggaactcactgccctga

>gi568815589f:117604473_117814645|GENSCAN_predicted_peptide_7|181_aa
XSSPNILPLPRPPQPHNLSSPQALQGLSHNEDLKASSFIILWLLQMTFSGKTSTFSPCAL
SASLRPAHLPNGISTKAVESSKSELSNFSLLASCKNSPGLCVGGSELTEYPCFPTFDLAA
VDADMRICWNSDFQDPLGSPTCHVLQYSLAGSAHICHGLLAASLSCLDYEQGAGVDRENI
V

>gi568815589f:117604473_117814645|GENSCAN_predicted_CDS_7|546_bp
nactcatctcccaacatacttcccttgcccagaccaccccagccacacaacctctctagt
ccacaagcactccaaggtctttcccacaatgaggacctcaaggccagcagctttattatt
ctgtggctgcttcaaatgaccttctctggaaagaccagcacattctccccctgtgcctta
tcggcctctctcagacctgctcatttgcctaatggcatctccacaaaagcagtagaaagc
tccaaatctgagctgagcaacttctcacttttggccagctgcaagaattcccctggcctc
tgtgttggaggctcagaactcaccgaatatccctgctttccaacttttgaccttgctgca
gtcgatgcagacatgagaatttgctggaactcagactttcaagacccactgggctctcca
acgtgtcatgttctccaatattcattagctggcagtgcacatatttgtcatgggctgctt
gctgcttcactttcgtgtttggactatgagcagggagcaggggtggatagagaaaatatt
gtgtga