GENSCAN 1.0	Date run: 16-Jul-119	Time: 15:51:03

Sequence gi568815581r:65429979_65658620 : 228642 bp : 47.00% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +    558    852  295  0  1  113   47   121 0.835   7.51
 1.02 Term +   3748   4035  288  0  0  105   39   134 0.811   5.58
 1.03 PlyA +   4384   4389    6                               1.05

 2.05 PlyA -   5517   5512    6                              -0.45
 2.04 Term -  12071  11970  102  2  0  107   40    68 0.703   2.18
 2.03 Intr -  12495  12402   94  2  1  114   88    11 0.581   3.67
 2.02 Intr -  22578  22467  112  1  1  127  108   -49 0.440   0.44
 2.01 Init -  22694  22619   76  2  1   83   72    21 0.426   1.25
 2.00 Prom -  24188  24149   40                              -2.16

 3.00 Prom +  28212  28251   40                              -4.86
 3.01 Init +  28869  28926   58  2  1   56  109    38 0.197   4.17
 3.02 Intr +  49697  49726   30  0  0  110   96    16 0.292   2.70
 3.03 Intr +  49818  49943  126  1  0   53    7   110 0.111   0.05
 3.04 Intr +  65488  65593  106  2  1   94  103   120 0.769  13.37
 3.05 Term +  74448  74511   64  0  1   49   55    63 0.134  -3.54
 3.06 PlyA +  75956  75961    6                               1.05

 4.13 PlyA -  79735  79730    6                               1.05
 4.12 Term - 100124  99998  127  1  1   58   52   165 0.992   7.66
 4.11 Intr - 104101 103934  168  0  0   75   82   121 0.975   9.26
 4.10 Intr - 105743 105648   96  1  0   98   70    46 0.880   2.92
 4.09 Intr - 106575 106342  234  2  0   93  101    85 0.975   7.10
 4.08 Intr - 107085 106891  195  2  0   91   65   118 0.936   8.33
 4.07 Intr - 107857 107346  512  1  2  142  106   499 0.999  48.87
 4.06 Intr - 108365 108225  141  2  0   88   80   177 0.995  17.45
 4.05 Intr - 111579 111477  103  2  1   92  117    45 0.987   7.98
 4.04 Intr - 119456 119348  109  0  1   60   65   120 0.690   6.24
 4.03 Intr - 119682 119546  137  2  2  107   20   204 0.864  15.71
 4.02 Intr - 128601 127828  774  2  0   15  110   613 0.251  46.80
 4.01 Init - 130977 130847  131  0  2   41  101   167 0.799  10.92
 4.00 Prom - 135456 135417   40                              -5.56

 5.06 PlyA - 137115 137110    6                               1.05
 5.05 Term - 156174 156062  113  1  2   63   54   136 0.475   6.42
 5.04 Intr - 164209 164100  110  0  2  122   77   -56 0.012  -3.37
 5.03 Intr - 167260 167153  108  0  0   74   69    83 0.238   4.40
 5.02 Intr - 198672 198607   66  2  0   46   79    87 0.198   1.62
 5.01 Init - 207547 207471   77  1  2   82  103    17 0.438   3.16
 5.00 Prom - 209107 209068   40                              -6.06

 6.05 PlyA - 209301 209296    6                               1.05
 6.04 Term - 213316 213179  138  1  0  -39   46   211 0.682   2.16
 6.03 Intr - 213935 213644  292  1  1   52   54   341 0.715  24.24
 6.02 Intr - 214126 213960  167  1  2   35    8   217 0.644   7.16
 6.01 Intr - 220278 220081  198  0  0   42   62    94 0.146   1.75

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815581r:65429979_65658620|GENSCAN_predicted_peptide_1|194_aa
XLVKVPRLCRCCSCNISPATYLLSILWKMPRAAAAGIHGIPESMSCQAGKRGSFVLLGSQ
LPALHQRPRGLVQTIVLLDGHRGPEFQQKQLGSKPGWQRMLTALRRRCTFPFYSKLPTSK
PKKPQAFGGVVGQIFNYSNLEVYFPHTAKNRKFILEKEGSSLEGLNLIFDLQSSQTHLKI
SKAQKPTDTIPRPQ

>gi568815581r:65429979_65658620|GENSCAN_predicted_CDS_1|585_bp
nngttggtgaaggtgccaaggctttgtcgatgctgttcctgcaatatttctcccgccacc
tacttactgagcatcctttggaagatgcccagggctgcagcagccggcattcatggcatt
cctgaaagtatgtcctgccaggcaggaaaaaggggcagctttgtgctgctgggttctcag
ctcccagcactgcaccagcgaccaaggggcctggttcagaccattgtcttacttgatgga
catagagggcccgagttccagcagaagcagctgggatccaagcctggatggcagaggatg
ctgacagccttgagaagacgctgtacttttccgttctacagtaagctgcccacatcaaag
cccaagaagccacaggcatttgggggagttgtgggtcagatatttaattattctaatcta
gaagtctattttccccacactgccaagaacagaaagttcattttggaaaaagagggtagt
tccttggaagggctgaatctcatctttgatctgcagagctctcagacccacctcaagatt
tccaaagcccagaaacccacagacactatccctcgcccacaataa

>gi568815581r:65429979_65658620|GENSCAN_predicted_peptide_2|127_aa
MGPLLFQGTFNRSPFLHLRNEGDNNRPPFAVVEATVLSHQSPYVVSSFLFLPLHNPDTRV
TFKTITVAGLGHKCTLACRNGVIPTETMLTQAVQLRKLGAAKLSNLREGKSKVTEMGREA
RFQLWMC

>gi568815581r:65429979_65658620|GENSCAN_predicted_CDS_2|384_bp
atgggtccactccttttccaaggtacgttcaatagatctccatttcttcatctccgaaat
gagggcgataataacaggccaccatttgcagtggtggaagccactgtcctctctcatcag
tccccttatgttgtctcctcatttctatttttgccccttcacaaccctgacacaagagtg
actttcaagacaatcactgtggccggcttgggtcataaatgcaccttggcgtgcaggaat
ggagtcatccccactgaaaccatgttgactcaggcagtgcagctgaggaaactgggcgca
gcaaagctaagcaatttacgcgagggcaaatcgaaagtgacagaaatgggacgagaagcc
cgattccagctttggatgtgctga

>gi568815581r:65429979_65658620|GENSCAN_predicted_peptide_3|127_aa
MEQRDCPEIAAFVNLDLFAEGWKLFKEEEDLLQEQWRDPKANTGRCGWCFQLKDVASSKS
LNIFKPSPVKQGRAATRWTKEPQEHSLNPSPLGRDSRQRASNCGNPRDQIQPHGNVPSWF
MSTFEKH

>gi568815581r:65429979_65658620|GENSCAN_predicted_CDS_3|384_bp
atggagcagagagactgcccagaaattgctgcttttgtcaacctagatttgtttgcagaa
ggctggaaacttttcaaagaagaagaggacctccttcaggagcaatggagggatccaaaa
gccaacactggaagatgtggatggtgcttccagctcaaggacgtggcctccagcaagtcc
ctgaacatctttaagccctcacctgtcaaacagggccgagcagccacaagatggaccaag
gagccgcaagagcattccctgaacccttctccactgggccgtgattctcggcagcgagcc
tccaactgcggcaaccctcgggaccagattcagccgcatggcaacgtccccagctggttc
atgagcacatttgagaagcactga

>gi568815581r:65429979_65658620|GENSCAN_predicted_peptide_4|908_aa
MFPDAAAGPGGPGAAAASRAGGRGRAPARGACEVSPPSARGDQCSSFREDAPRPPVPGEE
GETPPCQPGVGKGQVTKPMPVSSNTRRNEDGLGEPEGRASPDSPLTRWTKSLHSLLGDQD
GAYLFRTFLEREKCVDTLDFWFACNGFRQMNLKDTKTLRVAKAIYKRYIENNSIVSKQLK
PATKTYIRDGIKKQQIDSIMFDQAQTEIQSVMEENAYQMFLTSDIYLEYVRSGGENTAYM
SNGGLGSLKVVCGYLPTLNEEEEWTCADFKCKLSPTVVGLSSKTLRATASVRSTETVDSG
YRSFKRSDPVNPYHIGSGYVFAPATSANDSEISSDALTDDSMSMTDSTGFADRTCACMDI
SLVGGEYDKGMVLIKEDDMVIWVGDGIPPYRVGSKKQLQREMHRSVKANGQVSLPHFPRT
HRLPKEMTPVEPATFAAELISRLEKLKLELESRHSLEERLQQIREDEEREGSELTLNSRE
GAPTQHPLSLLPSGSYEEDPQTILDDHLSRVLKTPGCQSPGVGRYSPRSRSPDHHHHHHS
QYHSLLPPGGKLPPAAASPGACPLLGGKGFVTKQTTKHVHHHYIHHHAVPKTKEEIEAEA
TQRVHCFCPGGSEYYCYSKCKSHSKAPETMPSEQFGGSRGSTLPKRNGKGTEPGLALPAR
EGGAPGGAGALQLPREEGDRSQDVWQWMLESERQSKPKPHSAQSTKKAYPLESARSSPGE
RASRHHLWGGNSGHPRTTPRAHLFTQDPAMPPLTPPNTLAQLEEACRRLAEVSKPPKQRC
CVASQQRDRNHSATVQTGATPFSNPSLAPEDHKEPKKLAGVHALQASELVVTYFFCGEEI
PYRRMLKAQSLTLGHFKEQLSKKGNYRYYFKKASDEFACGAVFEEIWEDETVLPMYEGRI
LGKVERID

>gi568815581r:65429979_65658620|GENSCAN_predicted_CDS_4|2727_bp
atgttccccgacgccgcggccggcccgggggggcccggggctgccgccgcgagccgagcc
gggggccggggccgggcccctgccaggggcgcctgcgaggtctcgccgccgagcgcgcgc
ggggatcaatgcagcagcttccgtgaggatgccccgcggcccccagtgccaggggaagaa
ggggagaccccaccgtgtcagccaggggtgggcaagggccaggtcaccaaacccatgcct
gtctcttccaacaccaggcggaacgaagatgggttgggggagccggaggggcgggcatct
ccggattcccctctgacccggtggaccaagtccttacactccttattgggcgatcaagac
ggtgcttacctgttccgaactttcctggagagggagaaatgcgtggataccttagacttc
tggtttgcctgcaatggattcaggcagatgaacctgaaggataccaaaactttacgagta
gccaaagcgatctacaaaaggtacattgagaacaacagcattgtctccaagcagctgaag
cctgccaccaagacctacataagagatggcatcaagaagcagcagattgattccatcatg
tttgaccaggcgcagaccgagatccagtcggtgatggaggaaaatgcctaccagatgttt
ttgacttctgatatatacctcgaatatgtgaggagtgggggagaaaacacagcttacatg
agtaatgggggactcgggagcctaaaggtcgtgtgtggctatctccccaccttgaatgaa
gaagaggagtggacttgtgccgacttcaagtgcaaactttcgccaaccgtggttggcttg
tccagcaaaactctgagggccacggcgagtgtgaggtccacggaaactgttgacagtgga
tacaggtccttcaagaggagcgatcctgttaatccttatcacataggttctggctatgtc
tttgcaccagccaccagcgccaacgacagtgagatatccagtgatgcgctgacggatgat
tccatgtccatgacggacagcactggctttgcagaccgcacctgtgcatgtatggacatc
agtttggtgggaggggagtatgacaagggtatggtgctgattaaggaggatgacatggtc
atctgggtaggagatggaattcctccttatcgtgtgggcagtaagaaacagctccagaga
gaaatgcatcgcagtgtgaaggccaatggccaagtgtctctacctcatttcccgagaacc
caccgcctgcccaaggagatgacccccgtggaacccgccacctttgcagctgagctgatc
tcgaggctggaaaagctgaagctggagttggagagccgccacagcctggaggagcgcctg
cagcagatccgagaggatgaagagagagagggctccgagctcacactcaattcgcgggag
ggggcgcccacgcagcaccccctctccctactgccctccggcagctacgaggaagacccg
cagacgatactggacgatcacctgtccagggtcctcaagacccctggctgccagtctcca
ggcgtaggccgctatagcccccgctcccgctccccggaccaccaccaccaccaccattcg
cagtaccactccctgctcccgcccggtggcaagctgcctcccgcggccgcctcgccgggc
gcctgccccctcctcgggggcaaaggctttgtgaccaagcagacgacgaagcatgtccac
caccactacatccaccaccatgccgtccccaagaccaaggaggagatcgaggcggaggcc
acgcagcgggtgcactgcttctgccctgggggcagcgagtattactgctactcgaaatgc
aaaagccactccaaggctccggaaaccatgcccagcgagcagtttggcggcagcagaggc
agtaccttgcccaaacgcaatgggaaaggcacggagccgggcctggccctgcccgccagg
gaaggaggggcccccggcggagctggggccctgcagcttccccgggaggaaggagacagg
tcgcaggatgtctggcagtggatgctggagagtgagcggcagagcaagcccaagccccat
agtgcccaaagcacaaaaaaggcctaccccttggagtctgcccgctcgtctccaggcgaa
cgagccagccggcaccatctgtgggggggcaacagcgggcacccccgcaccaccccccgt
gcccacctgttcacccaggaccctgcgatgcctcccctgaccccacccaacacgctggct
cagctggaggaggcctgtcgcaggctagctgaggtgtcgaagcccccaaagcagcggtgc
tgtgtggccagtcagcagagggacaggaatcattcggccactgttcagacgggagccaca
cccttctccaatccaagcctggctccagaagatcacaaagagccaaagaaactggcaggt
gtccacgcgctccaggccagtgagttggttgtcacttactttttctgtggggaagaaatt
ccataccggaggatgctgaaggctcagagcttgaccctgggccactttaaagagcagctc
agcaaaaagggaaattataggtattacttcaaaaaagcaagcgatgagtttgcctgtgga
gcggtgtttgaggagatctgggaggatgagacggtgctcccgatgtatgaaggccggatt
ctgggcaaagtggagcggatcgattga

>gi568815581r:65429979_65658620|GENSCAN_predicted_peptide_5|157_aa
MAWAKEQRSEKDTVWKQQWWAGREDSFASCEVTAAVTNLTSTLMLLVSKTTFNRSLFLTP
TLITNEDFLSANNMKGKPFTWFLKERPAPSIIILKELLPLGTQKDFCEKKKRVVVFFPPD
AIAGHSQKAALCKPEREPSPGTKDVSIFILDFQPPEL

>gi568815581r:65429979_65658620|GENSCAN_predicted_CDS_5|474_bp
atggcctgggccaaagagcaacggagcgagaaagacacggtgtggaagcagcagtggtgg
gcagggcgtgaggacagttttgcttcctgtgaggtgacggcagctgtcactaacctgaca
tcaaccctgatgctgctcgtcagcaaaaccacctttaataggagcctgtttctgacacct
actctcatcacaaacgaagacttcctctctgcaaacaacatgaaaggaaagccttttact
tggttcctaaaggagaggccagcaccaagtataataatcctgaaagagctgctgcctctg
ggaacccagaaagacttttgcgaaaaaaaaaaaagagttgtggtgttttttcctcctgat
gccatagcaggacatagccagaaggcagccctctgcaagccagaaagagagccctcacca
ggaaccaaagacgtcagcatcttcatcttggacttccagcctccagaactgtga

>gi568815581r:65429979_65658620|GENSCAN_predicted_peptide_6|264_aa
ICTLPDITTEQGPPTSRCPDGHSGKTPHNKKEELEKKQEPSCCEKKHRALVNELEESKHV
WYSRGQRLFMVLWLKGVTFNVTIIDTKRQTKIVQKLCPGGQLPFLLYGMEEHKDTNKIEE
FLYPKLAALNPESNTAEQDIFAKFSAYIKNSNPVVNDNLEKGLLKALKVLDNHLISCHSE
EVDETSAEDEGISQRKFLDGNELTLADCNLLLTLHIVQVGFTIPEAFQGVQQYLSNAYAQ
EESASTCPDDEIKLTYEQGSKALQ

>gi568815581r:65429979_65658620|GENSCAN_predicted_CDS_6|795_bp
atctgcaccctccctgacatcaccacagagcaggggcccccaacatccagatgtccagat
ggacacagtggcaaaaccccacacaacaagaaagaagaattagagaaaaaacaagaacca
tcctgttgtgagaaaaagcacagggcattggtgaatgaattggaagaaagcaaacatgtc
tggtattccagaggccagagactgttcatggtgctgtggctcaagggagtcaccttcaat
gtcaccatcattgacaccaagaggcagaccaagatagtgcaaaagctgtgcccaggaggg
cagctcccattcctgctgtatggcatggaagaacacaaggacaccaacaagattgaggaa
tttctgtaccccaagctggcagctctgaaccctgaatccaacacagctgagcaggacata
tttgccaaattttctgcttacatcaagaattcaaacccagtagtcaatgacaatctggag
aagggactcctgaaagccctgaaggttttagacaatcacttgatatcctgccactcagaa
gaagtggatgaaaccagtgctgaagatgaaggcatctctcagaggaagtttctggatggc
aatgagctcaccctggctgactgcaacctgttgctaacgctccacatagtacaagtggga
ttcaccatccctgaggccttccagggcgtgcagcagtacttgagcaatgcctatgctcag
gaagaatctgcctccacctgtccagatgatgagatcaagctcacctatgagcaaggatcc
aaggccctccaataa