GENSCAN 1.0	Date run:  5-Nov-116	Time: 19:37:49

Sequence gi568815587r:44834887_45038335 : 203449 bp : 50.62% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   2381   2565  185  1  2   25   63   168 0.470   6.59
 1.02 Term +   4721   4829  109  2  1  117   53    -4 0.309  -3.02
 1.03 PlyA +   8337   8342    6                               1.05

 2.00 Prom +  12678  12717   40                              -3.06
 2.01 Init +  13309  13410  102  0  0   63   61   133 0.941   6.34
 2.02 Intr +  13581  13629   49  2  1  123   98   -14 0.799   1.35
 2.03 Intr +  18824  18981  158  0  2  111   28    82 0.637   4.23
 2.04 Intr +  25442  25474   33  1  0  124   99    41 0.581   7.22
 2.05 Intr +  25797  25921  125  2  2   21  115    26 0.286  -2.02
 2.06 Intr +  31228  31350  123  1  0   64   96   104 0.184   8.50
 2.07 Term +  40164  40371  208  0  1   77   46    72 0.011  -1.29
 2.08 PlyA +  41981  41986    6                               1.05

 3.04 PlyA -  43603  43598    6                               1.05
 3.03 Term -  49620  49483  138  0  0   20   49   144 0.303   1.66
 3.02 Intr -  61606  61438  169  0  1   72  111   146 0.833  15.25
 3.01 Init -  63778  63717   62  1  2   44   61    58 0.257  -0.58
 3.00 Prom -  67363  67324   40                              -5.46

 4.00 Prom +  68214  68253   40                              -6.66
 4.01 Init +  71531  71593   63  1  0   92   78     9 0.735   1.45
 4.02 Intr +  72746  72892  147  1  0   85   -4   102 0.443   1.13
 4.03 Intr +  74819  75013  195  1  0   28   59   363 0.866  27.01
 4.04 Intr +  83086  83223  138  0  0  103   41   162 0.709  13.66
 4.05 Intr +  84328  84426   99  0  0  109   79   197 0.999  21.21
 4.06 Intr +  84931  85113  183  0  0   67   84   121 0.953   9.58
 4.07 Intr +  91788  91871   84  2  0  119  107   179 0.996  22.92
 4.08 Term +  94245  94292   48  2  0  126   44    85 0.893   5.20
 4.09 PlyA +  97519  97524    6                               1.05

 5.14 PlyA -  98873  98868    6                              -3.24
 5.13 Term - 100131  99998  134  1  2   92   33   162 0.986   9.35
 5.12 Intr - 100776 100675  102  1  0   93   92   158 0.989  16.85
 5.11 Intr - 101231 101148   84  0  0   90   91    -1 0.532   0.19
 5.10 Intr - 102013 101917   97  1  1  108   70   133 0.987  13.08
 5.09 Intr - 102466 102418   49  0  1  100   89    91 0.994   9.08
 5.08 Intr - 102727 102669   59  1  2  121   99    34 0.984   5.48
 5.07 Intr - 103480 103321  160  0  1   69   81   258 0.651  23.19
 5.06 Intr - 108947 108720  228  1  0   51   40   144 0.228   2.88
 5.05 Intr - 115257 115087  171  2  0  100   92    33 0.330   3.96
 5.04 Intr - 119554 119250  305  1  2   78  116    48 0.338   1.99
 5.03 Intr - 132570 132413  158  1  2   78   18   104 0.043   2.13
 5.02 Intr - 135633 135533  101  2  2   52   37    78 0.328  -1.15
 5.01 Init - 138369 138185  185  0  2   55   58    97 0.301   1.99
 5.00 Prom - 145463 145424   40                              -6.16

 6.00 Prom + 153904 153943   40                              -6.66
 6.01 Init + 154045 154137   93  0  0   82   79    21 0.548   0.98
 6.02 Intr + 154933 154971   39  0  0  114   94    75 0.870   9.12
 6.03 Term + 155202 155384  183  2  0   85   54    73 0.832   1.14
 6.04 PlyA + 156711 156716    6                               1.05

 7.03 PlyA - 158637 158632    6                               1.05
 7.02 Term - 159804 159701  104  1  2   89   53   108 0.743   5.84
 7.01 Init - 166865 166823   43  2  1   72   59    58 0.679   1.88
 7.00 Prom - 174897 174858   40                              -2.46

 8.02 PlyA - 175181 175176    6                              -0.45
 8.01 Sngl - 176009 175269  741  2  0   86   42   263 0.983  17.71
 8.00 Prom - 177409 177370   40                              -2.46

 9.00 Prom + 182595 182634   40                              -4.06
 9.01 Init + 187688 187705   18  1  0   94   94    -5 0.059   0.71
 9.02 Intr + 190047 190142   96  2  0   49   70    87 0.071   3.21
 9.03 Term + 194879 195010  132  1  0   53   45   148 0.146   5.09
 9.04 PlyA + 196741 196746    6                               1.05

10.04 PlyA - 197393 197388    6                               1.05
10.03 Term - 199555 199503   53  2  2   96   46    42 0.745  -1.61
10.02 Intr - 199695 199633   63  1  0   82   64    75 0.560   3.19
10.01 Init - 201206 201104  103  2  1   69  106    31 0.489   3.41

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init +  42212  42331  120  1  0   80   51   138 0.832   9.52


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815587r:44834887_45038335|GENSCAN_predicted_peptide_1|97_aa
MSDFGEFTSVEEVTADVVEMARDLELEMEAEAVTELPQSHDKALVDEELLPMDKQRDGNY
SWGSSTNCSNTTTTCLLSAPLILANCFLELRQAPSLN

>gi568815587r:44834887_45038335|GENSCAN_predicted_CDS_1|294_bp
atgagtgacttcggggagttcacttcagtggaggaagtaactgcagatgtggtagaaatg
gcaagggacctagaattagaaatggaggctgaggctgtgactgaattgccgcaatctcat
gataaagccttagtggatgaggagttacttcctatggataagcaaagagatggaaactac
tcctggggttcctctaccaactgctccaacaccaccaccacctgccttctctctgcccct
ctaatcttggctaattgcttcctggagttaagacaggcaccatcactgaactga

>gi568815587r:44834887_45038335|GENSCAN_predicted_peptide_2|265_aa
MRGRGLLCLADLAPALIHLALRGVQSFAHQRWGKSCSGLASSRGSETKLTGLQEPVFISG
VDMHFQEEALRGEDQGFTWKLTGVQKQHLGEEAAALWASRFCVVSISWTTLKLQISQEDN
PRRGQTAEKAEVQASPPGCWPMPLKLNWGRVELLPSCALCCHTRAQAQVQVNTIGIRFQQ
DWHGAQHIIGAKWTCSRAGAAAPCKSERPWTSPLQRYILPRGALPAHVGLEHQTAQLTAS
FSDATAKYQTIYQAFPESWCPQPDL

>gi568815587r:44834887_45038335|GENSCAN_predicted_CDS_2|798_bp
atgaggggcaggggtctcctgtgcctggctgaccttgcccctgccctgatccatttggct
cttcgaggcgttcagtcctttgcgcaccaaagatggggcaaaagctgttcaggcttggca
agcagcaggggctcagaaaccaaattaacaggcctgcaggagcctgtctttatttctgga
gtggacatgcatttccaagaggaagcactgagaggagaggaccagggcttcacttggaaa
ctgaccggagtgcagaagcagcacctcggggaggaggccgcagccctctgggcctcccgg
ttctgtgtggtgagcatctcctggaccaccctcaagcttcagattagccaagaagataac
cctcggaggggccagacagctgagaaggctgaggtgcaggctagcccaccaggttgctgg
cccatgcccctcaagctcaactggggaagggtggaactgttgcccagctgtgccctctgc
tgccacactcgggcacaggcccaggtccaagtgaacacaattggcattaggttccagcag
gactggcatggggcccagcacatcatcggtgctaaatggacttgcagcagggctggagca
gcagctccatgcaagagtgagaggccttggaccagccccttgcagaggtacattctcccc
cgtggggccctcccagcccatgtgggcctagaacaccagacagcccaactcacagccagc
ttctctgatgccactgccaaataccagaccatttaccaggcttttccagagagctggtgt
ccccaaccagacctctaa

>gi568815587r:44834887_45038335|GENSCAN_predicted_peptide_3|122_aa
MPCTALELCKESPGSKMAFISFRYSVHLGYSAGMREPMKCSEQPYEVGITPSSPQYNGET
ESNGKRERIDLSNITLLKRLKELEEVELIAHRGQGPDAAALFENSKPLYPHPCTTWEQSF
AA

>gi568815587r:44834887_45038335|GENSCAN_predicted_CDS_3|369_bp
atgccctgcaccgccttagaactctgcaaagagtcccccggcagcaagatggccttcatc
agcttcaggtactccgtgcacttggggtacagtgctggcatgcgtgagcccatgaaatgc
tcagaacaaccctatgaagtaggtatcacaccatcatccccacagtacaatggggaaact
gagtccaatgggaaaagagagagaattgacttgtccaacatcacactgttgaagaggcta
aaggaactggaggaagtcgagctgatcgcccatcgaggccaggggcctgacgctgctgcc
ctgtttgaaaacagcaagcccctctacccccacccctgtaccacatgggaacagagcttt
gctgcataa

>gi568815587r:44834887_45038335|GENSCAN_predicted_peptide_4|318_aa
MEGDCLSCMKYLMFVFNFFIFPQCSHPKWSWALLEVFSMQLLNPQISNSNKEAQIFLEVV
RETNERDTGWLGGACLLAIGIWVMVDPTGFREIVAANPLLLTGAYILLAMGGLLFLLGFL
GCCGAVRENKCLLLFFFLFILIIFLAELSAAILAFIFRENVRIRPQAFLPPAISKGLVAI
QLTREFFTKELTKHYQGNNDTDVFSATWNSVMITFGCCGVNGPEDFKFASVFRLLTLDSE
EVPEACCRREPQSRDGVLLSREECLLGRSLFLNKQGCYTVILNTFETYVYLAGALAIGVL
AIELFAMIFAMCLFRGIQ

>gi568815587r:44834887_45038335|GENSCAN_predicted_CDS_4|957_bp
atggaaggcgactgtctgagctgcatgaagtatctgatgtttgtattcaatttcttcata
tttccccagtgttcccacccgaaatggagctgggccctccttgaagtgtttagcatgcag
ttgctgaatccccaaatctccaacagcaataaggaggcacagattttcctggaggttgtg
cgggagaccaacgagagagacacaggctggctgggcggggcctgcctgctggccatcggc
atctgggtcatggtggaccccaccggcttccgggagatcgtggctgccaatcctctgctc
ctcacgggcgcctacatcctcctggccatggggggcctgctctttctgctcggcttcctg
ggctgctgcggggccgtccgtgagaacaagtgtctgctgctatttttcttcctgttcatc
ctgatcatcttcctggcagagctctcagcagccatcctggccttcatcttcagggaaaat
gtacgtatcaggccccaagctttcctgcctcctgctatcagcaaggggttggtggccatt
cagctcacccgagaattcttcaccaaggagctcaccaagcactaccagggcaataacgac
acagacgtcttctctgccacctggaactcggtcatgatcacatttggttgctgcggggtc
aacgggcctgaagactttaagtttgcatctgtgtttcgactcctgaccctggatagtgaa
gaggtgccggaggcctgctgccggagggaaccccaaagtcgggacggggtcctgctgagc
cgggaggagtgcctcctgggaaggagcctattcctaaacaagcagggctgttacacggtg
atcctcaacaccttcgagacctacgtctacttggccggagcccttgccatcggggtactg
gccatcgagcttttcgccatgatctttgccatgtgcctcttccggggcatccagtag

>gi568815587r:44834887_45038335|GENSCAN_predicted_peptide_5|610_aa
MHQIPSERRLPRARLQLYFQPCCGKQFRAGFSSLCTTSTSPPVSMRQFSFSAQGLPQRPN
TRPLQASNVDKGHSSSFPDEETKLPKQFGLKQVAQGSVGSWVPGEGGADGNSAVPAKDFE
NPKAKRKTFHQRGCWPNATLHGGSWPSHWFLAADTGNPCAHHTFLQGHKHRHTGALLSAH
SHLATKEVLLPLLVEGDQGRWSPCCSQVPVGVWRSDPPTPATAAGCFLAPSPTPLPSPPP
WGLERNTSPRAADGGGGGVPAAHKSGPTFWGGGLGAGALGRRTRGRLTARSSPPGDTGAE
AWVSESGLTGRYTEEHSTSHTFRLVGLGESNCREMTRSRGYKWPVAADTETRESPEEDED
PVPWEGPGKRGCVQDSLEEQGACPSAEAGLEEKMAAKQPPPLMKKHSQTDLVSRLKTRKI
LGVGGEDDDGEVHRSKISQVLGNEIKFTIREPLGLRVWQFVSAVLFSGIAIMALAFPDQL
YDAVFDGAQVTSKTPIRLYGGALLRDFLKASPYRAQVFCLGVRVKENPIIGPGISLIMWN
ALYTAEKVIIRWTLLTEACYFGVQFLVVTATLAETGLMSLGILLLLVSRLLFVVISIYYY
YQVGRRPKKA

>gi568815587r:44834887_45038335|GENSCAN_predicted_CDS_5|1833_bp
atgcaccagattccttctgaacgccgcctgccgcgtgcacggctacaactctatttccag
ccatgctgtggcaagcagttccgggcgggcttcagctccctttgcaccaccagcacctcg
cctcctgtcagcatgaggcagttttcattttctgcccaggggcttccgcagcgccccaac
acaagacctttacaagccagtaatgtcgacaagggtcactcttcctcatttccggatgaa
gaaaccaaattgcccaagcaatttggtttgaagcaggttgcccaagggtctgttggctcg
tgggttcctggtgagggcggagctgatggcaacagtgccgtacctgcaaaggactttgaa
aaccccaaagcaaagagaaagaccttccaccagaggggctgctggcccaatgccacgctc
catggagggagttggccatcacattggtttctggctgcagacactggcaatccctgtgcc
caccacaccttcctgcaggggcacaaacacagacacacaggcgcactcttaagtgctcac
tcacacctggccaccaaggaggtgttgctgcccctgcttgtggagggcgaccagggcaga
tggagcccctgctgctcccaggttcctgtgggagtctggaggagtgaccctcccacccct
gcaacagccgctggctgcttcctggctccatccccaaccccactcccatccccacccccc
tggggccttgagaggaacacttcaccaagggccgcggacggaggtggtggcggagttccc
gctgcccacaagtctggcccgaccttctggggtgggggcctgggggcaggggccctgggc
cggagaacccggggccgcctaacggctcggagctcaccgccgggggacaccggcgctgag
gcctgggtctcagaaagtggcctcacggggagatacacggaggagcacagtacaagccat
accttcagactggttggtcttggggagtcaaactgccgtgaaatgaccaggagtagaggc
tataagtggccagtggctgcagacactgagacccgtgagagtccagaggaggatgaggac
ccagtgccctgggagggccctgggaagaggggctgtgtgcaagatagcctggaggaacaa
ggagcatgcccttctgcagaggccgggctggaggagaagatggcggccaagcagcccccg
cctctgatgaagaagcacagccagacggacctcgtgagccgcctgaagacccgcaagatc
ctcggcgtgggcggggaggatgacgacggggaggtgcatcgctccaagatcagccaggtc
ttaggcaatgaaatcaagtttaccattcgggagcctttggggctcagggtctggcagttc
gtctctgctgtgctcttctccggcattgccatcatggcgcttgccttccctgaccagctc
tatgatgcggtctttgatggagcccaggtgaccagcaagacccccatccgcctctacggc
ggtgccctcctcagggacttccttaaagcgagtccttaccgggctcaggttttctgtctg
ggagtccgtgtaaaagaaaacccaatcataggaccaggcatctccctgatcatgtggaac
gctctctacacggctgagaaggtcatcattcgatggaccctgctcaccgaagcttgctat
ttcggggtccagttcttggtggtcactgccacgctagctgagacgggcctcatgtccctg
gggatcctgctgctcctggtcagccgcctcctttttgtcgtcatcagcatttactactat
taccaagtcggccgaagacccaagaaggcctag

>gi568815587r:44834887_45038335|GENSCAN_predicted_peptide_6|104_aa
MEMVVLTYRKVVRIKWKQEEELPVNSKNLPTVTLKPASLEQQTQRLAGILIAHWTNCQGS
GRQLACVNSLSPHSDPMGKAVIIPVIVRPEKQWHRGVKWPQDWH

>gi568815587r:44834887_45038335|GENSCAN_predicted_CDS_6|315_bp
atggagatggtagtactcacttataggaaggtagtgaggattaaatggaagcaggaggag
gagctccctgtaaacagcaagaacttgcccacagtaaccctcaagcccgcatccctggag
cagcagacccagcgtctggctggcatcctaatcgctcattggacaaattgccagggcagc
ggtagacagctggcatgtgttaactcgctcagtcctcacagcgatcccatggggaaggcg
gttatcatccccgttattgtacggccagagaaacagtggcacagaggagtgaagtggcct
caggattggcactga

>gi568815587r:44834887_45038335|GENSCAN_predicted_peptide_7|48_aa
MNKVMELTPQCDEAAHSLGAAVSPIGGDGCDDSPNSDLHVVPTVLTGH

>gi568815587r:44834887_45038335|GENSCAN_predicted_CDS_7|147_bp
atgaacaaagtaatggaacttacgccccagtgtgatgaggcagcccattctctaggggct
gccgtctctcccatcggaggggacggttgtgatgacagccccaacagcgacctgcatgtg
gtgcccactgtgctcacaggacactga

>gi568815587r:44834887_45038335|GENSCAN_predicted_peptide_8|246_aa
MAILPKVIYRFDAIPIKLPMTFFTELEKTTLKFIWNQKRAHIAKTILSQKNKAGGIRLPD
FKLYYKATVIKIAWYWCQNRDVDKWNRTEPSEIMPHIYNYLIFDKPDKNKQWGKDSLFNK
WCWENWLAICRKLKVDPFLTPYTKINSRWIKDLHVRPKTIKTLEENLGNAIQDIGMGKDF
MSKTPKAMATKAKIDKWDLIKVKSFCTAKETTIRVNRQPTEWEKIFAIYSSDKGLISRIY
NELKQI

>gi568815587r:44834887_45038335|GENSCAN_predicted_CDS_8|741_bp
atggccatactgcccaaggtaatttatagattcgatgccatccccatcaagctaccaatg
actttcttcacagaattggaaaaaactactttaaagttcatatggaaccaaaaaagagcc
cacattgccaagacaatcctaagccaaaagaacaaagctggaggcatcaggctacctgac
ttcaaactatactacaaggctacagtaatcaaaatagcatggtactggtgccaaaacaga
gatgtagacaaatggaacagaacagagccctcagaaataatgccgcatatctacaactat
ctgatctttgacaaacctgacaaaaacaagcaatggggaaaggattccctatttaataaa
tggtgctgggaaaactggctagccatatgtagaaagctgaaagtggatcccttccttaca
ccttatacaaaaattaattcaagatggattaaagacttacatgttagacctaaaaccata
aaaaccctagaagaaaacctaggcaatgccattcaggacataggcatgggcaaggacttc
atgtctaaaacaccaaaagcaatggcaacaaaagccaaaattgacaaatgggatctaatt
aaagtaaaaagcttctgcacagcaaaagaaaccaccatcagagtgaacaggcaacctaca
gaatgggagaaaatttttgcaatctactcatctgacaaagggctaatatccagaatctac
aatgaactcaaacaaatttaa

>gi568815587r:44834887_45038335|GENSCAN_predicted_peptide_9|81_aa
MSLMLQLPHKEAQANSLEKPPGGKLRHLIGSPIPIARLAQTSFDMVRLAAPTKHIGEMPA
FEPPSYISQEDVKMYPLNGQY

>gi568815587r:44834887_45038335|GENSCAN_predicted_CDS_9|246_bp
atgagcctgatgttacagctgccacataaggaagcccaagctaactccctggagaagcca
cctggaggtaaactgaggcacctgattggcagccccatccccattgctagacttgcccag
acctcatttgatatggtccgccttgctgcccccacaaagcacatcggggaaatgccagca
tttgagcctccaagctacatctcccaggaagatgtgaaaatgtatcccctgaatgggcag
tactag

>gi568815587r:44834887_45038335|GENSCAN_predicted_peptide_10|72_aa
MDSSLVDFADPFALCQPSGAAACSEHCVGLESGLGSLVPSVAIDCAVDSRCEQKRECGYG
VRLPGPHPEGNT

>gi568815587r:44834887_45038335|GENSCAN_predicted_CDS_10|219_bp
atggatagctccttggtggattttgcagacccctttgctctttgtcagccttctggggct
gcagcctgctcagagcactgtgttggactggagtcaggactgggttcccttgttccaagt
gtggccattgactgtgctgtggacagcaggtgtgagcagaagagagaatgtggatatgga
gtaaggcttcctggaccacatcctgagggcaatacctag