GENSCAN 1.0	Date run:  7-Nov-116	Time: 04:48:13

Sequence gi568815592f:153939359_154218718 : 279360 bp : 38.16% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   4870   5031  162  0  0   96  105    93 0.956  11.05
 1.02 Intr +  15553  15908  356  0  2   20    8   235 0.266   1.86
 1.03 Intr +  16231  16381  151  1  1   63  107    83 0.623   6.94
 1.04 Term +  18214  18444  231  0  0   97   41   120 0.838   3.69
 1.05 PlyA +  21829  21834    6                               1.05

 2.02 PlyA -  22057  22052    6                               1.05
 2.01 Sngl -  23967  23734  234  0  0    3   32   726 0.976  53.35
 2.00 Prom -  46837  46798   40                              -0.75

 3.00 Prom +  53336  53375   40                              -5.15
 3.01 Sngl +  63602  63961  360  1  0   73   50   168 0.923   7.32
 3.02 PlyA +  64574  64579    6                               1.05

 4.04 PlyA -  65199  65194    6                               1.05
 4.03 Term -  87988  87815  174  1  0   40   51   102 0.463  -1.52
 4.02 Intr -  88903  88700  204  1  0   40   78   147 0.881   7.37
 4.01 Init -  90404  90399    6  2  0   84   78     0 0.743  -0.47
 4.00 Prom -  90460  90421   40                              -3.65

 5.00 Prom +  95668  95707   40                              -2.75
 5.01 Init +  99911  99947   37  1  1   66   64    67 0.387   0.32
 5.02 Intr + 100053 100476  424  1  1   95  110   426 0.590  37.50
 5.03 Intr + 150468 150820  353  0  2  126  113   302 0.988  30.54
 5.04 Intr + 151594 152114  521  2  2  112  101   441 0.803  39.54
 5.05 Intr + 167089 167122   34  0  1   76  107    -3 0.003  -2.72
 5.06 Intr + 179325 179540  216  1  0  136  106    25 0.090   6.65
 5.07 Intr + 196260 196333   74  1  2   82   77    40 0.278   0.51
 5.08 Term + 197234 197428  195  1  0   54   49   153 0.674   4.43
 5.09 PlyA + 198025 198030    6                               1.05

 6.03 PlyA - 198089 198084    6                               1.05
 6.02 Term - 220682 220470  213  2  0   80   53   293 0.997  21.25
 6.01 Init - 223356 223255  102  0  0   71   83    70 0.366   5.09
 6.00 Prom - 224893 224854   40                              -1.85

 7.03 PlyA - 227523 227518    6                               1.05
 7.02 Term - 228755 228349  407  0  2   78   47   272 0.669  16.46
 7.01 Init - 229109 228965  145  2  1   92   11    28 0.204  -4.17
 7.00 Prom - 229428 229389   40                              -8.75

 8.00 Prom + 231750 231789   40                              -6.55
 8.01 Init + 233847 233992  146  2  2   77   98   129 0.869  12.44
 8.02 Intr + 234354 234568  215  0  2  -16   53    82 0.110  -8.26
 8.03 Term + 236151 237193 1043  1  2   43   48   331 0.287  15.90
 8.04 PlyA + 237225 237230    6                               1.05

 9.07 PlyA - 238492 238487    6                               1.05
 9.06 Term - 241252 241116  137  2  2   21   42   116 0.163  -2.50
 9.05 Intr - 242383 242309   75  2  0   80   39    72 0.121   0.07
 9.04 Intr - 260567 260310  258  0  0   53   92   189 0.933  12.31
 9.03 Intr - 267568 267445  124  1  1   76   43    97 0.603   3.24
 9.02 Intr - 273497 273412   86  0  2   86   76   104 0.791   7.62
 9.01 Intr - 274918 274860   59  0  2   62   95    68 0.817   2.51

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init - 261760 261706   55  1  1   92   70    46 0.807   4.70


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815592f:153939359_154218718|GENSCAN_predicted_peptide_1|299_aa
YDGIALMMLSIDQEPGEPTICEHYLNSVIFNCMLFIPQGVVGNVWRHVGLSQHLPKSRPI
TSSEIEAVISCLTTKKSPGPDGFTAKFYRRYEEDLAQFLLKLFQTIEKEGLLPNSFHEAS
IILTQKPGRDTTEKENFRPISLMSINVKILNKILANRIQQQTESDCSLSTAINIGSSGHG
ILAKEKIKGIQIGREEVKLSLFADDMIVYLENHIASAQNLLKLSIHQVTHGKPLEGTETP
ENSVTSALDLLAGAHSHPVECAFIFNKPLLLLLHSSRALFVCFIQLFVQNAKNLDTLNW

>gi568815592f:153939359_154218718|GENSCAN_predicted_CDS_1|900_bp
tatgatggcattgctttaatgatgctgagtatagatcaagaaccaggagagccaactatt
tgcgaacattaccttaattcagtgattttcaactgcatgctgtttattccccagggtgta
gttggcaatgtctggaggcatgttgggctgtcacaacatctgcccaagagtagaccaata
acaagctctgaaattgaggcagtaattagttgcctaacaaccaaaaaaagcccaggacca
gatggattcaccgccaaattctaccggaggtatgaagaggacctggcacaattcctcctg
aaattattccaaacaatagaaaaagagggactcctccctaactcatttcatgaagccagc
atcatcctgacacaaaaacctggcagagacacaacagaaaaagaaaatttcaggccaata
tccctgatgagcatcaatgtgaaaatcctcaataaaatactggcaaaccgaatccagcag
caaacagaatccgattgcagcttatccaccgcaatcaatattggaagttctggccacggc
attctggcaaaagaaaaaataaaaggtattcaaataggaagagaggaagtcaaattgtct
ctgtttgcagatgacatgattgtatatttagaaaaccacatcgcctcagcccaaaatctt
cttaagctgagcatacaccaagtaacccatgggaaacctctagagggaactgaaactcca
gaaaattctgtaaccagcgcccttgacctgcttgctggggcccactcccaccctgtggag
tgtgctttcattttcaataaacctctgcttttattgcttcattcttcccgtgctttattt
gtgtgttttatccaattatttgttcaaaatgccaagaacctggacaccctcaactggtaa

>gi568815592f:153939359_154218718|GENSCAN_predicted_peptide_2|77_aa
MLKKKKKEKEKEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKEEEEEEEEE
EEEEEEEDHLHLAVFSY

>gi568815592f:153939359_154218718|GENSCAN_predicted_CDS_2|234_bp
atgctgaagaagaagaagaaggagaaggagaaggaagaagaagaagaagaagaagaagaa
gaggaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaa
gaggaagaggaagaggaagaggaagaggagaaggaagaagaagaagaagaagaagaagag
gaagaggaagaggaagaggaagaccatttgcacctagctgttttctcctattaa

>gi568815592f:153939359_154218718|GENSCAN_predicted_peptide_3|119_aa
MEEVHADWSMDGRGQALKKHHPAGQKTSRKFSLLVADSTWNSHPGPQALDHPWLEGEVSL
GTHPFPTSNLSASYCHQHAICTTQTVHSEGHLQAHAEPHRQPPAKFVPELVGPQSFRVG

>gi568815592f:153939359_154218718|GENSCAN_predicted_CDS_3|360_bp
atggaggaagtacatgctgactggtccatggatggccgtgggcaggccttaaaaaagcac
catccagctggccaaaagacatcaaggaagttctcactcctggtcgcagactccacttgg
aacagccatcccggcccccaggctttagaccatccctggcttgaaggtgaggtttcactg
gggactcatcccttcccaactagtaacctgtctgcctcctactgccatcaacatgccatc
tgcaccacccagactgttcattctgagggacacctgcaggcccatgccgagccccaccgt
cagccccctgccaaatttgttcctgagctagttggcccccaaagtttcagagtgggctga

>gi568815592f:153939359_154218718|GENSCAN_predicted_peptide_4|127_aa
METHPGPEGNLLSSREEPSPGKIYHLLMKSPWALNNQQQYSGTMSRALSKTGNLMASSET
QQVPSHGDYGNRERGSICFGESNRKNKQTNKKHKSLYLVIQISFPDLVKDHQSGPSMNVQ
EPQHYWG

>gi568815592f:153939359_154218718|GENSCAN_predicted_CDS_4|384_bp
atggagacacaccctgggccagaagggaacctgctgtcttcaagggaagaacccagtcct
ggaaaaatttaccacttgctaatgaagagcccttgggccctgaataaccagcagcaatac
tcaggtactatgtcgagggccttgagtaagactggaaacttgatggcttcaagtgagact
cagcaggttcccagccatggtgactatgggaacagagagagaggctccatttgttttgga
gaaagtaacaggaaaaacaaacaaacaaacaagaaacacaagagtctctacctggtaatt
cagataagttttccagatcttgtcaaagaccatcaaagtggtccctcaatgaatgtgcaa
gaaccacagcattactggggttga

>gi568815592f:153939359_154218718|GENSCAN_predicted_peptide_5|617_aa
MAHAPLLQRCGAARTGFCKKQQELWQRRKEAAEALGTRKVSVLLATSHSGARPAVSTMDS
SAAPTNASNCTDALAYSSCSPAPSPGSWVNLSHLDGNLSDPCGPNRTDLGGRDSLCPPTG
SPSMITAITIMALYSIVCVVGLFGNFLVMYVIVRYTKMKTATNIYIFNLALADALATSTL
PFQSVNYLMGTWPFGTILCKIVISIDYYNMFTSIFTLCTMSVDRYIAVCHPVKALDFRTP
RNAKIINVCNWILSSAIGLPVMFMATTKYRQGSIDCTLTFSHPTWYWENLLKICVFIFAF
IMPVLIITVCYGLMILRLKSVRMLSGSKEKDRNLRRITRMVLVVVAVFIVCWTPIHIYVI
IKALVTIPETTFQTVSWHFCIALGYTNSCLNPVLYAFLDENFKRCFREFCIPTSSNIEQQ
NSTRIRQNTRDHPSTANTVDRTNHQTLPSSKAGKLYARKSGSRNCSVALTGSHAIPTFTK
LRSHHVCGSRLLQECVGGSNSLGKCLLLGHPTSFLSGHSALHIRGTAKMAGSLANLKRLY
KRLGPAMVSNFSKPLRLVPGPSSCTGAASPQTVPKTVSEIQVQQKYTSPLLQIHGESGEN
WQLLSMTCPYDVDGAGI

>gi568815592f:153939359_154218718|GENSCAN_predicted_CDS_5|1854_bp
atggcccacgctcccctcctgcagcggtgcggggcagccaggactggtttctgtaagaaa
cagcaggagctgtggcagcggcgaaaggaagcggctgaggcgcttggaacccgaaaagtc
tcggtgctcctggctacctcgcacagcggtgcccgcccggccgtcagtaccatggacagc
agcgctgcccccacgaacgccagcaattgcactgatgccttggcgtactcaagttgctcc
ccagcacccagccccggttcctgggtcaacttgtcccacttagatggcaacctgtccgac
ccatgcggtccgaaccgcaccgacctgggcgggagagacagcctgtgccctccgaccggc
agtccctccatgatcacggccatcacgatcatggccctctactccatcgtgtgcgtggtg
gggctcttcggaaacttcctggtcatgtatgtgattgtcagatacaccaagatgaagact
gccaccaacatctacattttcaaccttgctctggcagatgccttagccaccagtaccctg
cccttccagagtgtgaattacctaatgggaacatggccatttggaaccatcctttgcaag
atagtgatctccatagattactataacatgttcaccagcatattcaccctctgcaccatg
agtgttgatcgatacattgcagtctgccaccctgtcaaggccttagatttccgtactccc
cgaaatgccaaaattatcaatgtctgcaactggatcctctcttcagccattggtcttcct
gtaatgttcatggctacaacaaaatacaggcaaggttccatagattgtacactaacattc
tctcatccaacctggtactgggaaaacctgctgaagatctgtgttttcatcttcgccttc
attatgccagtgctcatcattaccgtgtgctatggactgatgatcttgcgcctcaagagt
gtccgcatgctctctggctccaaagaaaaggacaggaatcttcgaaggatcaccaggatg
gtgctggtggtggtggctgtgttcatcgtctgctggactcccattcacatttacgtcatc
attaaagccttggttacaatcccagaaactacgttccagactgtttcttggcacttctgc
attgctctaggttacacaaacagctgcctcaacccagtcctttatgcatttctggatgaa
aacttcaaacgatgcttcagagagttctgtatcccaacctcttccaacattgagcaacaa
aactccactcgaattcgtcagaacactagagaccacccctccacggccaatacagtggat
agaactaatcatcagaccttacctagcagtaaagcaggcaagttgtacgctagaaaatct
ggaagcagaaactgctccgttgccctaacagggtctcatgccattccgaccttcaccaag
cttagaagccaccatgtatgtggaagcaggttgcttcaagaatgtgtaggaggctctaat
tctctaggaaagtgcctgcttttaggtcatccaacctctttcctctctggccactctgct
ctgcacattagagggacagccaaaatggcaggctccctggccaacttgaaaaggctatat
aaaaggcttggtccagccatggtgtccaacttctccaagcccctccgcttggttcctggg
ccctcttcctgcactggcgcagcatccccacagacagtgcccaagacagtgtctgaaatt
caggtacaacaaaaatatacatctcctttacttcaaatacatggggagagtggtgaaaac
tggcagctgctttccatgacctgcccatatgatgtggatggagctgggatttga

>gi568815592f:153939359_154218718|GENSCAN_predicted_peptide_6|104_aa
MNIDRAENRIQAGALEHSSEKRWRDKEESATKVGCKEHDLAMINQLLDDPKLTARKYREW
KVMNTLLIQDIYQQQRASPAPDDTDDTPQELKKSPSSPSVENSI

>gi568815592f:153939359_154218718|GENSCAN_predicted_CDS_6|315_bp
atgaacatagatagagcagagaacaggatacaagctggggctttagaacactccagtgag
aagaggtggcgtgacaaggaggaatcagcaactaaggtgggatgtaaagaacatgatctg
gccatgattaaccagttgctggatgacccgaagctgacagccaggaaatacagagagtgg
aaagtcatgaacaccctgctgatccaggacatctatcagcagcagcgggcttcgcctgcc
cctgatgacactgatgacaccccccaggaactcaagaaatcaccttcttctccctctgtt
gaaaattccatttga

>gi568815592f:153939359_154218718|GENSCAN_predicted_peptide_7|183_aa
MTDTLINRGSLDTETCMQGTPHVNIGVILPQTKKPLEARREAWNNSFPEETKVSEDDEME
KLYKSLEQASLSPLGDRRPSTKKELRKSFVKRCKNPSINEKLHKIRTLNSTLKVTKFQIV
DELYGCGARNGWFCREILANHSMFVWLQGRAVKVNITFIGQDDLDVLKALGHSHSSAQGS
FSQ

>gi568815592f:153939359_154218718|GENSCAN_predicted_CDS_7|552_bp
atgactgataccctcataaatagggggagtttggacacagagacatgcatgcagggaaca
ccccatgtgaatattggagttatactgccacaaaccaaaaaaccacttgaagccaggaga
gaggcttggaataactccttccctgaagagacaaaagtgtctgaagatgatgaaatggag
aagctgtacaaatcattagagcaagctagtctatctcctcttggggaccgacgaccttcg
actaaaaaggagttgagaaaatcctttgttaagcggtgtaaaaatccatctataaacgag
aaactccacaaaatccgaacattgaatagcacattaaaggtaacaaaatttcaaattgtg
gatgaactctatggatgtggggcaaggaacggctggttctgcagagagattcttgctaat
cacagcatgtttgtgtggttgcagggaagggctgtaaaagtaaatataacctttataggg
caagatgatcttgacgttcttaaagcactaggacattcacacagtagcgcccaaggcagt
ttttcacaatag

>gi568815592f:153939359_154218718|GENSCAN_predicted_peptide_8|467_aa
MGRNQSGKAENSKNQNTSSPPKEHNSSPAREQNWMENEFDELTEVGFRSDGENGTKLENT
LQDIIQENFPNLARQVNIQIQEIQRTPQRYSLRRATPRHITVRFIKVEMKEKMLRAVREK
EIQTTIREYYKHLYTNKLENLEETEKFMDTYTLPKLNQEEVESLNRLKIASEIEAIINSL
PTKKNPGPDGFAAEFYQRYKEELVPFLLKLFQSIEKQGILPNSFYEASIILIPKPGRDTT
KKGNFRPISLMNIDVKILNKILANQIQQQIKKLIHHNQVGFIPGMQDCFNVPKSIDIIYH
INRTNDKNHMIMSIDAEKAFNKNQQPFVLKTLNKLGIDGMYLKIIRAIYDKPTANIILNG
QKLEAFPLKTGIRQGCPLSPLPFNIVMEVLAKAIRQEKEIKCIQLGKEEVKLSLFVDHMI
VYLENPIISAQNLLKLISNFSKVSGYKINVQKSQAFQYTNNRQRAKS

>gi568815592f:153939359_154218718|GENSCAN_predicted_CDS_8|1404_bp
atggggagaaaccagagtggaaaggctgaaaattccaaaaaccagaacacctcttctcct
ccaaaggaacacaactcctcaccagcaagggaacaaaactggatggagaatgaatttgat
gagttgacagaagtaggcttcagaagtgacggggagaatgggaccaaattggaaaacact
cttcaggatattatccaggagaacttccccaacctagcaaggcaggtcaacattcaaatt
caggaaatacagagaacgccacaaagatactccttgagaagagcaaccccaagacacata
actgtgagattcatcaaggttgaaatgaaggaaaaaatgttaagggcagtcagagagaaa
gaaatacaaactaccatcagagaatactataaacacctctacacaaataaactagaaaat
ctagaagaaactgagaaattcatggacacatacaccctcccaaaactaaaccaggaagaa
gttgaatctctgaatagactaaaaatagcttctgaaattgaggcaataattaatagccta
ccaaccaaaaaaaatccaggaccagatggattcgcagccgaattctaccagaggtacaaa
gaggagctggtaccattccttctgaaactattccaatcaatagaaaaacagggaatcctc
ccaaactcattttatgaggccagcatcatcctgataccaaagcctggcagagacacaaca
aaaaaagggaattttaggccaatatccctgatgaacattgatgtaaaaatcctcaataaa
atactggcaaaccaaatccagcagcaaatcaaaaagcttatccaccacaatcaagtcggc
ttcatccctgggatgcaagactgcttcaacgtacccaaatcaatagacataatctatcac
ataaacagaaccaatgataaaaaccacatgattatgtcaatagatgcagaaaaggccttc
aacaaaaatcaacagcctttcgtgctaaaaactctcaataaactaggtattgatggaatg
tatctcaaaataataagagctatttatgacaaacccacagccaatatcatactgaatggg
caaaaactggaagcattccctttgaaaactggcataagacaaggatgccctctctcacca
ctcccattcaacatagtaatggaagttctggccaaagcaatcagacaagagaaagaaata
aagtgtattcaattaggaaaagaggaggtcaaattgtctttgtttgtggatcacatgatt
gtatatttagaaaaccccatcatctcagcccaaaatctccttaagctgataagcaacttc
agcaaagtctcaggatacaaaatcaatgtgcaaaaatcacaagcattccaatacaccaat
aacagacagagagccaaatcatga

>gi568815592f:153939359_154218718|GENSCAN_predicted_peptide_9|246_aa
XWLNKLGSAVIHQESTTKDEECYSESEQEDPEIAAETPPPPHASQTQSLALGLSSGCHCS
LAANFALIVSPTNGLLFPKSVPDIPALVPVERQSLPDTVNSLSAAEDEGQPITFAVQVHS
PVPSEAGIHKALENSFVTSESGFLNSLSSDDTSSLSSNHDHLTVPDKPAGSKIMDKGLVP
CGPVETEFEVQNLGTSAAEAPAKFWAYWGMPVLSEQTIDWGMEEEEKGAAHSFGRVLERS
ELITVG

>gi568815592f:153939359_154218718|GENSCAN_predicted_CDS_9|741_bp
nngtggttaaataaacttggatcggctgtaatccatcaggaatccactacaaaggatgaa
gaatgttacagtgaaagtgaacaggaagatccagaaatagctgcggagacaccaccccct
cctcacgcttcccagactcagtctttggcccttggcctgtcttcaggctgccattgcagt
cttgctgccaattttgcccttatcgtcagcccaacaaacggcctgctgttccccaaaagc
gttccagacattcctgccctcgtacctgtagagagacaatccttgcctgacacagttaac
agtttgtctgctgctgaagatgagggacaaccaataacgtttgctgtgcaagttcattca
cctgtaccctcagaggcaggcatccacaaggccctggaaaacagttttgtcacatcagaa
agtggatttttgaactctttatctagtgatgatacttcttcattgagtagcaatcatgac
catcttactgtcccagataagcctgctggatcaaagatcatggacaaaggtctcgtgccc
tgcggccctgtggagacagaatttgaggtacaaaacctgggaacctcagcagcagaggct
ccggccaaattctgggcctactggggcatgcctgtgctgtcagagcagacaatagactgg
ggtatggaagaggaggagaagggagcagcacattcatttggcagggtcttggaaaggagt
gaacttataactgttggctaa