GENSCAN 1.0	Date run:  6-Nov-116	Time: 20:13:18

Sequence gi568815593f:69067907_69277628 : 209722 bp : 42.29% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Term +   1310   1516  207  1  0   62   41   154 0.491   4.46
 1.02 PlyA +   3334   3339    6                               1.05

 2.00 Prom +   5781   5820   40                              -4.65
 2.01 Init +   6428   6527  100  1  1   55   59    99 0.284   4.18
 2.02 Term +   6878   7461  584  0  2   20   47   377 0.990  20.47
 2.03 PlyA +   8521   8526    6                               1.05

 3.00 Prom +  14609  14648   40                              -4.95
 3.01 Init +  26350  26432   83  0  2   86   99   150 0.589  16.41
 3.02 Intr +  26574  26702  129  0  0   95   57    44 0.143   0.89
 3.03 Intr +  40443  40530   88  0  1   88   70    64 0.812   3.65
 3.04 Intr +  47331  47501  171  2  0   80   94    96 0.982   8.62
 3.05 Intr +  48020  48283  264  1  0   95   67   127 0.926   8.09
 3.06 Intr +  49333  49490  158  0  2   57   69    97 0.684   2.59
 3.07 Intr +  50593  50722  130  1  1   95   98     5 0.680   1.98
 3.08 Intr +  53788  53989  202  0  1   61   84    51 0.672  -0.06
 3.09 Intr +  55293  55519  227  1  2   94   79   123 0.972   8.78
 3.10 Intr +  60098  60226  129  1  0  100   89    65 0.976   7.77
 3.11 Intr +  61541  61707  167  1  2   73   47   100 0.034   2.24
 3.12 Intr +  84235  84361  127  1  1   56   64    61 0.011   0.26
 3.13 Intr +  99005  99282  278  1  2   71   28   156 0.080   3.29
 3.14 Intr +  99287  99377   91  2  1   47   84   110 0.941   5.58
 3.15 Intr + 100002 100172  171  2  0   86   88   189 0.993  17.92
 3.16 Intr + 100267 100437  171  0  0  103   25   172 0.998  11.62
 3.17 Intr + 103364 103546  183  1  0   73  107   181 0.896  17.56
 3.18 Intr + 106345 106503  159  0  0   73   99   105 0.932   9.36
 3.19 Intr + 106971 107207  237  2  0   69   77   156 0.930   9.49
 3.20 Intr + 107491 107631  141  0  0   36   94    97 0.810   4.73
 3.21 Intr + 109333 109443  111  0  0   42  101    66 0.871   2.96
 3.22 Intr + 109618 109719  102  0  0  127   39    66 0.932   5.05
 3.23 Intr + 113711 113795   85  1  1   47  101   104 0.954   6.07
 3.24 Intr + 113906 114036  131  0  2   49  117    77 0.549   6.19
 3.25 Intr + 121519 121603   85  0  1   28   35   113 0.182  -1.53
 3.26 Intr + 121661 121862  202  0  1   59    7   265 0.534  12.92
 3.27 Intr + 123889 123944   56  1  2  136  108    36 0.770   8.10
 3.28 Intr + 140290 140453  164  2  2   59   92   105 0.949   6.77
 3.29 Term + 141801 141893   93  2  0  111   38    81 0.981   2.25
 3.30 PlyA + 142432 142437    6                               1.05

 4.03 PlyA - 142581 142576    6                               1.05
 4.02 Term - 150496 149962  535  0  1   61   47   495 0.553  35.43
 4.01 Init - 153097 152979  119  1  2   68   74    68 0.869   3.12
 4.00 Prom - 160507 160468   40                              -7.45

 5.00 Prom + 161600 161639   40                              -6.45
 5.01 Init + 167070 167298  229  2  1   53   20   163 0.002   4.58
 5.02 Intr + 182839 182975  137  2  2   92   47   108 0.599   6.47
 5.03 Intr + 187554 187622   69  2  0   68   94    35 0.346   0.56
 5.04 Intr + 190137 190247  111  2  0   89   86    19 0.675   1.46
 5.05 Intr + 191912 192030  119  1  2   40  110    69 0.928   2.64
 5.06 Intr + 194299 194398  100  1  1  114  110   128 0.999  16.79
 5.07 Intr + 195795 196115  321  2  0   53   70   134 0.565   3.23
 5.08 Intr + 201301 201387   87  0  0  100  119    43 0.765   7.85
 5.09 Intr + 204986 205135  150  1  0   67   68    58 0.602   1.14
 5.10 Intr + 208637 208784  148  1  1   61  116   111 0.892  10.09

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term +  61541  61711  171  1  0   73   50   118 0.952   3.34
S.002 Init +  98011  98089   79  0  1   53   86    39 0.843   1.47
S.003 Intr +  98973  99282  310  1  1   66   28   175 0.827   3.75


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815593f:69067907_69277628|GENSCAN_predicted_peptide_1|68_aa
QAPVSSAAASQKRHQVHTKRAHKQPQEQQKKEAAVVDESSICILESAYQHSPNTYSLTKL
LEFYLSFH

>gi568815593f:69067907_69277628|GENSCAN_predicted_CDS_1|207_bp
caagcaccagtctcctcagctgctgcttcacaaaagaggcaccaagtccacaccaaacga
gcacacaagcagccccaagagcagcagaagaaggaagcagcagtggtggatgagagctcc
atatgcattttagagtcagcttatcaacattcaccaaacacatattctcttacaaaactg
ctggaattttaccttagctttcattga

>gi568815593f:69067907_69277628|GENSCAN_predicted_peptide_2|227_aa
MFSKEKDKGSPLTMEESATGHARKAKDSRGMDGAGNFQQPGANRTCEGGSGSPEPSSREA
TFRERAAAQEKALPPTGVLLHSGTLPICGHPPTSSLSPPIPPAGDRHRGTVPSPRAPPQG
CHVAEEAGELTLGCSQAGLSSVAPPHPSYTHRPGCQPAGVSARGAFQHPPVLEELHLSPN
IFTRLLGAAFSALACMVHHLHLSEKLAWVPVEAFVGLQIQVNQSANP

>gi568815593f:69067907_69277628|GENSCAN_predicted_CDS_2|684_bp
atgttttccaaggaaaaggacaagggaagtccactcaccatggaagaaagtgccacaggg
catgctagaaaggccaaggacagcagagggatggatggagccggcaacttccagcagcca
ggagcaaacaggacttgtgaaggaggcagtggatctccagagcccagcagcagggaggct
actttccgggagagggcagcagcacaggagaaggccctgccgcctacaggggtcctactc
cactccgggaccctgcccatctgtggccatcctcccaccagcagcctgtcacctcccatc
cctcccgctggtgacaggcaccggggtaccgtgcccagcccccgggcacctccacagggc
tgccatgtggcagaggaagccggtgaactgacgcttggctgcagccaggcaggcctaagc
tctgttgccccgccgcatcccagctacacccacaggcctggatgccaaccagctggcgtc
agtgcccgcggtgccttccagcacccgcctgtcctggaggagctgcacctgtcccctaat
atcttcacccgcctcttaggggcagccttctcggccctggcgtgcatggtgcaccacctc
cacctctctgaaaagctggcctgggtgcccgtggaggccttcgtggggctgcagatccaa
gtgaaccaatccgccaacccgtga

>gi568815593f:69067907_69277628|GENSCAN_predicted_peptide_3|1444_aa
MEEKYGGDVLAGPGGGGGLGPVDVPSARLPPGSPGSSGACCRRKALKPKSFCLNFWVTRQ
TVSLRTARQFTTLLLFEHSDIVVISLLSVLFTSSGGGPAKGGVLLLVLALCCKVGFHTAS
RKLSVDVGGAKRLQALSHLVSVLLLCPWVIVLSVTTESKVESWFSLIMPFATVIFFVMIL
DFYVDSICSVKMEVSKCARYGSFPIFISALLFGNFWTHPITDQLRAMNKAAHQESTEHVL
SGGVVLFTFVELFYGVLTNSLGLISDGFHMLFDCSALVMGLFAALMSRWKATRIFSYGYG
RIEILSGFINGLFLIVIAFFVFMESVARLIDPPELDTHMLTPVSVGGLIVNLIGICAFSH
AHSHAHGASQGSCHSSDHSHSHHMHGHSDHGHGHSHGSAGGGMNANMRGVFLHVLADTLG
SIGVIVSTVLIEQFGWFIADPLCSLFIAILIFLSVVPLIKDACQVLLLRLPPEYEKELHI
ALEKIQKIEGLISYRDPHFWRHSASIVAGTIHIQVTSDVLEQRIVQQVTGILKDAGVNNL
TIQVEKEAYFQHMSGLSTGFHDVLAMTKQMESMKYCKDGTYIITFSVGLIHSPETILLLH
LEGYKSSCQPFGDWVGEGDWRSYHLVAAAAARERRRRGRPRESLARPSGLASLWPRPSRT
PSRDRPGNAFSATGSRQWEGSECHEQANKEGAVRGLNLRLGWLFSACCGGTAVGFCWVSL
AGRASGVLLLPAELLPGEEEAMALRVTRNSKINAENKAKINMAGAKRVPTAPAATSKPGL
RPRTALGDIGNKVSEQLQAKMPMKKEAKPSATGKVIDKKLPKPLEKVPMLVPVPVSEPVP
EPEPEPEPEPVKEEKLSPEPILVDTASPSPMETSGCAPAEEDLCQAFSDVILAVNDVDAE
DGADPNLCSEYVKDIYAYLRQLEEEQAVRPKYLLGREVTGNMRAILIDWLVQVQMKFRLL
QETMYMTVSIIDRFMQNNCVPKKMLQLVGVTAMFIASKYEEMYPPEIGDFAFVTDNTYTK
HQIRQMEMKILRALNFGLGRPLPLHFLRRASKIGEVDVEQHTLAKYLMELTMLDYDMVHF
PPSQIAAGAFCLALKILDNGEWTPTLQHYLSYTEESLLPVMQHLAKNVVMVNQGLTKHMT
VKNKYATSKHAKISTLPQLNSALVQDLAKAVAKRFPIVSEICSFRWVLGLVDFKNEATDP
RGVKPQTFDLCSECYSVTAHKDSTVLFSRWVHGLAGFRSEAADLPPSAVIFTSRARMKEE
PVVTTATEKQGGKVAGKATFSERVCLLSGSLSPQPAMEEQPQMQDADEPADSGGEGRAGG
PPQVAGAQAACSEDRMTLLLRLRAQTKQQLLEYKSMVDAKLKQASESKLLEIQTEKNKQK
IDLDSMENSERIKIIRQNLQMEIKITTVIQHVFQNLILGSKVNWAEDPALKEIVLQLEKN
VDMM

>gi568815593f:69067907_69277628|GENSCAN_predicted_CDS_3|4335_bp
atggaggagaaatacggcggggacgtgctggccggccccggcggcggcggcggccttggg
ccggtggacgtacccagcgctcggctgcctccgggctccccgggctcttcgggtgcctgc
tgcagaaggaaggcgctaaagccaaaaagcttctgcttgaatttctgggttacaaggcag
acagtcagtcttagaactgcccgccagttcacgactttgctgctatttgagcacagtgat
attgttgtcatttcactactcagtgttttgttcaccagttctggaggaggaccagcaaag
ggtggagtattattgctagtactggctttgtgttgtaaagttggttttcatacagcttcc
agaaagctctctgtcgacgttggtggagctaaacgtcttcaagctttatctcatcttgtt
tctgtgcttctcttgtgcccatgggtcattgttctttctgtgacaactgagagtaaagtg
gagtcttggttttctctcattatgccttttgcaacggttatcttttttgtcatgatcctg
gatttctacgtggattccatttgttcagtcaaaatggaagtttccaaatgtgctcgttat
ggatcctttcccatttttattagtgctctcctttttggaaatttttggacacatccaata
acagaccagcttcgggctatgaacaaagcagcacaccaggagagcactgaacacgtcctg
tctggaggagtggtactttttacctttgtggaattattctatggcgtgctgaccaatagt
ctgggcctgatctcggatggattccacatgctttttgactgctctgctttagtcatggga
ctttttgctgccctgatgagtaggtggaaagccactcggattttctcctatgggtacggc
cgaatagaaattctgtctggatttattaatggactttttctaatagtaatagcgtttttt
gtgtttatggagtcagtggctagattgattgatcctccagaattagacactcacatgtta
acaccagtctcagttggagggctgatagtaaaccttattggtatctgtgcctttagccat
gcccatagccatgcccatggagcttctcaaggaagctgtcactcatctgatcacagccat
tcacaccatatgcatggacacagtgaccatgggcatggtcacagccacggatctgcgggt
ggaggcatgaatgctaacatgaggggtgtatttctacatgttttggcagatacacttggc
agcattggtgtgatcgtatccacagttcttatagagcagtttggatggttcatcgctgac
ccactctgttctctttttattgctatattaatatttctcagtgttgttccactgattaaa
gatgcctgccaggttctactcctgagattgccaccagaatatgaaaaagaactacatatt
gctttagaaaagatacagaaaattgaaggattaatatcataccgagaccctcatttttgg
cgtcattctgctagtattgtggcaggaacaattcatatacaggtgacatctgatgtgcta
gaacaaagaatagtacagcaggttacaggaatacttaaagatgctggagtaaacaattta
acaattcaagtggaaaaggaggcatactttcaacatatgtctggcctaagtactggattt
catgatgttctggctatgacaaaacaaatggaatccatgaaatactgcaaagatggtact
tacatcataactttttctgttgggctgatccattccccagaaaccattctcttacttcac
ttagaagggtataagtccagctgccagccttttggggactgggtaggagaaggcgactgg
aggtcttaccatttggtggccgctgcagctgcccgagagcgcaggcgcagaggcagacca
cgtgagagcctggccaggccttccggcctagcctcactgtggccccgcccctctcgaacg
ccttcgcgcgatcgccctggaaacgcattctctgcgaccggcagccgccaatgggaaggg
agtgagtgccacgaacaggccaataaggagggagcagtgcggggtttaaatctgaggcta
ggctggctcttctcggcgtgctgcggcggaacggctgttggtttctgctgggtgtccttg
gctggtcgggcctccggtgttctgcttctccccgctgagctgctgcctggtgaagaggaa
gccatggcgctccgagtcaccaggaactcgaaaattaatgctgaaaataaggcgaagatc
aacatggcaggcgcaaagcgcgttcctacggcccctgctgcaacctccaagcccggactg
aggccaagaacagctcttggggacattggtaacaaagtcagtgaacaactgcaggccaaa
atgcctatgaagaaggaagcaaaaccttcagctactggaaaagtcattgataaaaaacta
ccaaaacctcttgaaaaggtacctatgctggtgccagtgccagtgtctgagccagtgcca
gagccagaacctgagccagaacctgagcctgttaaagaagaaaaactttcgcctgagcct
attttggttgatactgcctctccaagcccaatggaaacatctggatgtgcccctgcagaa
gaagacctgtgtcaggctttctctgatgtaattcttgcagtaaatgatgtggatgcagaa
gatggagctgatccaaacctttgtagtgaatatgtgaaagatatttatgcttatctgaga
caacttgaggaagagcaagcagtcagaccaaaatacctactgggtcgggaagtcactgga
aacatgagagccatcctaattgactggctagtacaggttcaaatgaaattcaggttgttg
caggagaccatgtacatgactgtctccattattgatcggttcatgcagaataattgtgtg
cccaagaagatgctgcagctggttggtgtcactgccatgtttattgcaagcaaatatgaa
gaaatgtaccctccagaaattggtgactttgcttttgtgactgacaacacttatactaag
caccaaatcagacagatggaaatgaagattctaagagctttaaactttggtctgggtcgg
cctctacctttgcacttccttcggagagcatctaagattggagaggttgatgtcgagcaa
catactttggccaaatacctgatggaactaactatgttggactatgacatggtgcacttt
cctccttctcaaattgcagcaggagctttttgcttagcactgaaaattctggataatggt
gaatggacaccaactctacaacattacctgtcatatactgaagaatctcttcttccagtt
atgcagcacctggctaagaatgtagtcatggtaaatcaaggacttacaaagcacatgact
gtcaagaacaagtatgccacatcgaagcatgctaagatcagcactctaccacagctgaat
tctgcactagttcaagatttagccaaggctgtggcaaagagatttcctattgtgtccgaa
atttgttccttccggtgggttcttggtctcgttgacttcaagaatgaagccacggaccct
cgcggagtgaagccgcagaccttcgacctttgcagtgagtgttacagtgttacagctcat
aaagacagcactgttctcttctcccggtgggttcatggtctcgctggcttcaggagtgaa
gctgcagaccttccgccgtctgcagttattttcaccagtagagcccggatgaaagaggag
cccgtagtaaccacggcaaccgaaaaacaaggcggaaaggtggcgggaaaagcgaccttt
tctgagcgcgtttgcctgttgagtggtagcctttcccctcaaccagcaatggaggagcag
ccccagatgcaagacgccgacgagcccgcggactccggaggggaaggccgggcaggcggg
ccaccgcaggtcgccggcgcccaggcggcgtgcagcgaggaccgcatgaccctgctcctc
aggctgagagcacagacaaaacaacaactcttagaatataaatcaatggttgatgcaaaa
ttaaaacaagcttcagaaagtaagcttttagaaatacagactgaaaagaacaaacagaag
attgatttggacagtatggaaaactcagagaggataaagatcatacgacaaaacctacag
atggagataaaaattactactgttattcaacatgtgttccagaaccttattttggggagt
aaagtcaattgggcagaggatcctgcccttaaggaaattgttctgcagcttgagaagaat
gttgacatgatgtaa

>gi568815593f:69067907_69277628|GENSCAN_predicted_peptide_4|217_aa
MTLNEHAAFKHLFNKAHLAPPLIHLTLSGHSTFQRARGWGQTLGEVGENPLRRGRSTRGQ
LPDHSRDLEGTVGQIQGSLPSTPRYRLPSDWLIGGTTANPRRRLARLPPGSPHPHTPKTN
KVLAEERGIPAVGTGPTCQDAARLPQGSNPRRRTHLTARSNRLKVPSSHTPAGAVTGPPQ
RRGHRSASATAFTPRRRRHSQHRPYRPRCGNATNCFT

>gi568815593f:69067907_69277628|GENSCAN_predicted_CDS_4|654_bp
atgactcttaacgagcatgctgccttcaagcatctgtttaacaaagcacatcttgcaccg
cccttaatccatttaaccctgagtggacacagcacgtttcagagagcacggggttggggc
cagacgcttggagaggttggggagaacccgctccggcgaggacgcagtacgcggggccag
ttgcccgaccattcccgagaccttgaagggacagtgggtcagatccagggttcgcttcct
tccacgccccgctaccgccttccttccgattggctgatcgggggcaccacagccaatcct
agacggcgattggccaggctaccgccagggtcgcctcacccgcacacgcctaagactaac
aaggtcctggcggaggagcgggggatcccggcagtaggtacaggacctacctgccaagat
gctgcacggttgccgcaaggctcgaaccctcggcgccggacccacctcactgcccggtcc
aacaggctcaaagtcccatcctcacacacacccgcgggcgccgtcactggccctccgcag
aggcgcggtcaccgctctgcctctgccaccgcctttactccccgacgccgtcgccatagt
cagcaccgtccctaccgcccaagatgcggaaacgcgacaaattgctttacctga

>gi568815593f:69067907_69277628|GENSCAN_predicted_peptide_5|491_aa
MALDVKSRAKRYEKLDFLGEGQVRLSGRTGRAPSGQPRAASTFAGFPVEARGLAWLLVLV
GGNRPDALAAHSLHPGGVSAGSHYSCECAVSYLKPICLGVSPEAHGEALVTTADYSGPRG
SILLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWIL
HRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGV
DMWAVGCILAELLLRSIPEIHTENLSTTTIHSWPRRKQNSIAPNVMTDHSIEKANEERQQ
LRVDRLEIVDLLTIILGNLLAIGIVAGIIFKVIRKMTCRLKNCTLLPYLLSYFKLFLCSI
EKVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDD
LLDLIQGLFLFNPCARITATQALKMKYFSNRPGPTPGCQLPRPNCPVETLKEQSNPALAI
KRKRTEALEQX

>gi568815593f:69067907_69277628|GENSCAN_predicted_CDS_5|1473_bp
atggctctggacgtgaagtctcgggcaaagcgttatgagaagctggacttccttggggag
ggacaggtgaggctctctggaaggacggggagggccccaagcggacagccccgcgccgcc
tccacctttgcgggttttcccgtggaggccagaggtctggcttggctgctcgttctcgtt
gggggaaaccgtccagacgcacttgctgcccattctttacatcctgggggagtctctgct
ggtagccactacagctgtgaatgtgctgtgtcatacctgaagccaatatgtctcggagtt
tcacctgaggcccatggtgaggccctggttaccactgctgattattcagggcccaggggc
tctatactccttgatgcttttggacataaatctaatattagccttgtctttgattttatg
gaaactgatctagaggttataataaaggataatagtcttgtgctgacaccatcacacatc
aaagcctacatgttgatgactcttcaaggattagaatatttacatcaacattggatccta
catagggatctgaaaccaaacaacttgttgctagatgaaaatggagttctaaaactggca
gattttggcctggccaaatcttttgggagccccaatagagcttatacacatcaggttgta
accaggtggtatcgggcccccgagttactatttggagctaggatgtatggtgtaggtgtg
gacatgtgggctgttggctgtatattagcagagttacttctaaggagtataccagaaatt
cacactgagaatttatcaaccaccacaatccattcatggccaagaagaaaacagaattcc
atagcccctaatgttatgactgatcactccattgagaaagcaaatgaagagagacagcag
ttgagagtagacaggttagagattgtggacctgttaacaatcatacttggaaatttatta
gccattggcattgttgctggaatcatctttaaagttataaggaaaatgacatgcagacta
aagaattgtactcttctgccataccttttgtcctattttaagctgttcttgtgctcaatt
gaaaaggttccttttttgccaggagattcagaccttgatcagctaacaagaatatttgaa
actttgggcacaccaactgaggaacagtggccggacatgtgtagtcttccagattatgtg
acatttaagagtttccctggaatacctttgcatcacatcttcagtgcagcaggagacgac
ttactagatctcatacaaggcttattcttatttaatccatgtgctcgaattacggccaca
caggcactgaaaatgaagtatttcagtaatcggccagggccaacacctggatgtcagctg
ccaagaccaaactgtccagtggaaaccttaaaggagcaatcaaatccagctttggcaata
aaaaggaaaagaacagaggccttagaacaagnn