GENSCAN 1.0	Date run:  6-Nov-116	Time: 20:18:54

Sequence gi568815586f:110181790_110446467 : 264678 bp : 44.13% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   9131   9259  129  1  0   69   19   181 0.653  10.19
 1.02 Intr +  10828  10917   90  0  0   50  108    23 0.593   0.69
 1.03 Intr +  22075  22161   87  0  0   88  110    51 0.978   7.47
 1.04 Intr +  36255  36398  144  2  0   67   91    62 0.634   4.88
 1.05 Term +  47124  47186   63  2  0   72   49    40 0.113  -3.61
 1.06 PlyA +  47667  47672    6                               1.05

 2.00 Prom +  50373  50412   40                              -3.46
 2.01 Init +  62694  62852  159  2  0   56   73   163 0.921  11.64
 2.02 Term +  88245  88415  171  2  0   62   50   112 0.451   2.63
 2.03 PlyA +  89646  89651    6                               1.05

 3.00 Prom +  91185  91224   40                              -5.16
 3.01 Init + 100001 100118  118  1  1   98   90   210 0.988  22.56
 3.02 Intr + 100924 101006   83  2  2  110   78    53 0.934   5.86
 3.03 Intr + 110231 110335  105  1  0  103  115    42 0.996   8.81
 3.04 Intr + 114810 114948  139  2  1   94  105   241 0.999  26.44
 3.05 Intr + 141203 141283   81  0  0   66   99    31 0.490   1.61
 3.06 Intr + 144601 144686   86  2  2   46   84    90 0.949   3.94
 3.07 Intr + 145764 146228  465  2  0   89   90   356 0.990  29.22
 3.08 Intr + 150808 150896   89  0  2  113   65    40 0.993   2.97
 3.09 Intr + 151392 151494  103  0  1   79  107    48 0.991   5.98
 3.10 Intr + 152223 152354  132  2  0   59   70    69 0.888   3.04
 3.11 Intr + 157714 157932  219  0  0   37   55   163 0.845   6.40
 3.12 Intr + 158870 159205  336  1  0   43   89   480 0.910  39.32
 3.13 Intr + 160439 160659  221  1  2  120   82   363 0.999  36.00
 3.14 Intr + 161443 161645  203  1  2   25   68   166 0.995   7.23
 3.15 Intr + 163097 163182   86  0  2   69   38    68 0.907  -0.56
 3.16 Intr + 163460 163593  134  1  2   42   92    99 0.599   5.14
 3.17 Intr + 164212 164329  118  1  1   99  100   115 0.990  14.27
 3.18 Intr + 164412 164627  216  2  0   71   18   288 0.226  18.80
 3.19 Intr + 167580 167834  255  2  0   77   64    62 0.196   0.34
 3.20 Intr + 168503 168543   41  1  2  124   73    38 0.189   2.92
 3.21 Term + 173045 173252  208  2  1   27   39   154 0.147   1.21
 3.22 PlyA + 173296 173301    6                               1.05

 4.25 PlyA - 178064 178059    6                               1.05
 4.24 Term - 188634 188435  200  1  2  -22   37   168 0.508  -1.74
 4.23 Intr - 189367 189143  225  2  0  112   71    80 0.601   6.66
 4.22 Intr - 190408 190290  119  0  2   76   70    25 0.166  -0.39
 4.21 Intr - 192544 192359  186  0  0  110   45   316 0.298  28.30
 4.20 Intr - 194427 194277  151  1  1  107  102   103 0.999  12.82
 4.19 Intr - 195828 195604  225  1  0  105   83   101 0.959   9.26
 4.18 Intr - 200159 199963  197  1  2  108  116    41 0.989   7.96
 4.17 Intr - 201171 201054  118  1  1  124   51    94 0.566   8.82
 4.16 Intr - 204680 204538  143  1  2   -2  115    69 0.917   0.60
 4.15 Intr - 206103 205950  154  1  1   87   85    56 0.659   4.33
 4.14 Intr - 206834 206723  112  2  1   66   48    70 0.729   0.75
 4.13 Intr - 213431 213312  120  2  0   46  106    52 0.913   3.49
 4.12 Intr - 214641 214477  165  0  0   73   91    84 0.547   7.36
 4.11 Intr - 219669 219564  106  2  1   57   81    44 0.512   0.82
 4.10 Intr - 222031 221738  294  0  0   29   86   234 0.587  13.42
 4.09 Intr - 223819 223687  133  2  1   84   74    40 0.625   1.90
 4.08 Intr - 224182 224072  111  2  0   79   91    34 0.677   3.15
 4.07 Intr - 226746 226665   82  0  1   75  115    66 0.944   7.21
 4.06 Intr - 254415 254321   95  1  2   60  116    30 0.906   2.68
 4.05 Intr - 254894 254768  127  2  1   77   95    41 0.980   3.95
 4.04 Intr - 255363 255295   69  0  0  120   86   -20 0.562   0.38
 4.03 Intr - 258599 258523   77  0  2   77   94   140 0.995  12.73
 4.02 Intr - 263762 263663  100  2  1   77   89    21 0.548   0.78
 4.01 Init - 264401 264399    3  2  0  108   81     0 0.399   1.30

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init + 247052 247208  157  1  1   80   53   130 0.805   8.85
S.002 Term - 253428 253366   63  0  0   72   49    42 0.834  -3.41


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815586f:110181790_110446467|GENSCAN_predicted_peptide_1|170_aa
QTMEEKKGISGYSYTQEELERVSALKSEVDEMKGRTLDDMSEMVKKLYSLVSEKKSALAS
VIKELRQLRQKYQELTQECDEKKSQYDSCAAGLESNRSKLEQKLREKQKVIRESHGPNMK
QAKMWRDLEQLMECKKQCFLKQQSQTSIGQRRKKNFLQNNCQVGKESLSP

>gi568815586f:110181790_110446467|GENSCAN_predicted_CDS_1|513_bp
caaactatggaggagaaaaagggtatatctggatatagttacacccaagaagagctagaa
agagtatctgcactgaagagtgaagttgatgaaatgaaaggacgaacattggatgatatg
tctgaaatggtgaaaaaactgtattcattggtatctgaaaagaagtcagctcttgcctca
gttataaaagagctacgacagttgcgtcaaaaatatcaagaactgacccaggagtgtgat
gaaaagaaatcccagtatgatagctgtgcagcaggcctcgaaagcaatcggtccaaatta
gaacagaaacttcgggaaaaacaaaaagttatacgagaaagtcatggtccaaatatgaaa
caagcaaaaatgtggcgtgatttggaacaattaatggaatgtaagaaacagtgctttctg
aaacaacaaagccaaacttccattggtcagaggaggaaaaagaactttttacagaataat
tgccaagtcggcaaggagagcctcagcccttga

>gi568815586f:110181790_110446467|GENSCAN_predicted_peptide_2|109_aa
MRVALQKSLCVKGQWRSPTVCGAAGVHAEPWALIELVLKVQQLFGISHFNPLADILWVVQ
EDQVKELDFHRGPAICRGPPINTASAEGWEIREATVGEEAEAIAEKARA

>gi568815586f:110181790_110446467|GENSCAN_predicted_CDS_2|330_bp
atgagggtggctctgcagaagtctctctgcgtgaaagggcagtggagatcgcccacagtg
tgtggagctgctggcgttcatgccgagccgtgggccctcatagagctggtcctgaaggtt
cagcagctgttcggcataagccacttcaatccgctggcagacatactctgggtggtgcag
gaggatcaggtgaaagaactggattttcacaggggccctgccatctgcagagggcctcca
atcaacacggcatctgcagagggctgggagatcagagaagccacagttggagaagaagca
gaggcgattgcagaaaaggccagggcatag

>gi568815586f:110181790_110446467|GENSCAN_predicted_peptide_3|1145_aa
MENAHTKTVEEVLGHFGVNESTGLSLEQVKKLKERWGSNGKTLLELVIEQFEDLLVRILL
LAACISFVLAWFEEGEETITAFVEPFVILLILVANAIVGVWQERNAENAIEALKEYEPEM
GKVYRQDRKSVQRIKAKDIVPGDIVEIAVGDKVPADIRLTSIKSTTLRVDQSILTGESVS
VIKHTDPVPDPRAVNQDKKNMLFSGTNIAAGKAMGVVVATGVNTEIGKIRDEMVATEQER
TPLQQKLDEFGEQLSKVISLICIAVWIINIGHFNDPVHGGSWIRGAIYYFKIAVALAVAA
IPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVCRM
FILDRVEGDTCSLNEFTITGSTYAPIGEVHKDDKPVNCHQYDGLVELATICALCNDSALD
YNEAKGVYEKVGEATETALTCLVEKMNVFDTELKGLSKIERANACNSGAPEGVIDRCTHI
RVGSTKVPMTSGVKQKIMSVIREWGSGSDTLRCLALATHDNPLRREEMHLEDSANFIKYE
TNLTFVGCVGMLDPPRIEVASSVKLCRQAGIRVIMITGDNKGTAVAICRRIGIFGQDEDV
TSKAFTGREFDELNPSAQRDACLNARCFARVEPSHKSKIVEFLQSFDEITAMTGDGVNDA
PALKKAEIGIAMGSGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSN
VGEVVCIFLTAALGFPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMNKPPRNPKEPL
ISGWLFFRYLAIGCYVGAATVGAAAWWFIAADGGPRVSFYQLSHFLQCKEDNPDFEGVDC
AIFESPYPMTMALSVLVTIEMCNALNSLSENQSLLRMPPWENIWLVGSICLSMSLHFLIL
YVEPLPLIFQITPLNVTQWLMVLKISLPVILMDETLKFVARNYLEPGKECVQPATKSCSF
SACTDGISWPFVLLIMPLVAEGPAISVACCHPVPPLASLSFAQKTNNHTYPNWDTTLQNA
DDPFWRKLSLELSELPGKQGIWPTSLTTAAPTSPRTGASALTEQYWSNRFLNHFAEIKKG
LLGEMADSRDGTENVQYVPEEYQSTRKEGLKNSNQRCGYVKGTQEPTEKATTAEECEQQN
KAVLD

>gi568815586f:110181790_110446467|GENSCAN_predicted_CDS_3|3438_bp
atggagaacgcgcacaccaagacggtggaggaggtgctgggccacttcggcgtcaacgag
agtacggggctgagcctggaacaggtcaagaagcttaaggagagatggggctccaacgga
aaaaccttgctggaacttgtgattgagcagtttgaagacttgctagttaggattttatta
ctggcagcatgtatatcttttgttttggcttggtttgaagaaggtgaagaaacaattaca
gcctttgtagaaccttttgtaattttactcatattagtagccaatgcaattgtgggtgta
tggcaggaaagaaatgctgaaaatgccatcgaagcccttaaggaatatgagcctgaaatg
ggcaaagtgtatcgacaggacagaaagagtgtgcagcggattaaagctaaagacatagtt
cctggtgatattgtagaaattgctgttggtgacaaagttcctgctgatataaggttaact
tccatcaaatctaccacactaagagttgaccagtcaattctcacaggtgaatctgtctct
gtcatcaagcacactgatcccgtccctgacccacgagctgtcaaccaagataaaaagaac
atgctgttttctggtacaaacattgctgctgggaaagctatgggagtggtggtagcaact
ggagttaacaccgaaattggcaagatccgggatgaaatggtggcaacagaacaggagaga
acaccccttcagcaaaaactagatgaatttggggaacagctttccaaagtcatctccctt
atttgcattgcagtctggatcataaatattgggcacttcaatgacccggttcatggaggg
tcctggatcagaggtgctatttactactttaaaattgcagtggccctggctgtagcagcc
attcctgaaggtctgcctgcagtcatcaccacctgcctggctcttggaactcgcagaatg
gcaaagaaaaatgccattgttcgaagcctcccgtctgtggaaacccttggttgtacttct
gttatctgctcagacaagactggtacacttacaacaaaccagatgtcagtctgcaggatg
ttcattctggacagagtggaaggtgatacttgttcccttaatgagtttaccataactgga
tcaacttatgcacctattggagaagtgcataaagatgataaaccagtgaattgtcaccag
tatgatggtctggtagaattagcaacaatttgtgctctttgtaatgactctgctttggat
tacaatgaggcaaagggtgtgtatgaaaaagttggagaagctacagagactgctctcact
tgcctagtagagaagatgaatgtatttgataccgaattgaagggtctttctaaaatagaa
cgtgcaaatgcctgcaactcaggtgctcctgaaggtgtcattgacaggtgcacccacatt
cgagttggaagtactaaggttcctatgacctctggagtcaaacagaagatcatgtctgtc
attcgagagtggggtagtggcagcgacacactgcgatgcctggccctggccactcatgac
aacccactgagaagagaagaaatgcaccttgaggactctgccaactttattaaatatgag
accaatctgaccttcgttggctgcgtgggcatgctggatcctccgagaatcgaggtggcc
tcctccgtgaagctgtgccggcaagcaggcatccgggtcatcatgatcactggggacaac
aagggcactgctgtggccatctgtcgccgcatcggcatcttcgggcaggatgaggacgtg
acgtcaaaagctttcacaggccgggagtttgatgaactcaacccctccgcccagcgagac
gcctgcctgaacgcccgctgttttgctcgagttgaaccctcccacaagtctaaaatcgta
gaatttcttcagtcttttgatgagattacagctatgactggcgatggcgtgaacgatgct
cctgctctgaagaaagccgagattggcattgctatgggctctggcactgcggtggctaaa
accgcctctgagatggtcctggcggatgacaacttctccaccattgtggctgccgttgag
gaggggcgggcaatctacaacaacatgaaacagttcatccgctacctcatctcgtccaac
gtcggggaagttgtctgtattttcctgacagcagcccttggatttcccgaggctttgatt
cctgttcagctgctctgggtcaatctggtgacagatggcctgcctgccactgcactgggg
ttcaaccctcctgatctggacatcatgaataaacctccccggaacccaaaggaaccattg
atcagcgggtggctctttttccgttacttggctattggctgttacgtcggcgctgctacc
gtgggtgctgctgcatggtggttcattgctgctgacggtggtccaagagtgtccttctac
cagctgagtcatttcctacagtgtaaagaggacaacccggactttgaaggcgtggattgt
gcaatctttgaatccccatacccgatgacaatggcgctctctgttctagtaactatagaa
atgtgtaacgccctcaacagcttgtccgaaaaccagtccttgctgaggatgcccccctgg
gagaacatctggctcgtgggctccatctgcctgtccatgtcactccacttcctgatcctc
tatgtcgaacccttgccactcatcttccagatcacaccgctgaacgtgacccagtggctg
atggtgctgaaaatctccttgcccgtgattctcatggatgagacgctcaagtttgtggcc
cgcaactacctggaacctggtaaagagtgtgtgcagcctgccaccaaatcctgctcgttc
tcggcatgcaccgatgggatttcctggccgtttgtgctgctcataatgcccctggtggct
gaaggcccagccatcagtgtcgcttgttgccaccccgtgcctcccttggcctctctgagc
tttgcccagaagaccaacaatcatacataccctaactgggacaccactctgcagaatgca
gatgatccattctggaggaagctgtcccttgagctcagtgagctcccaggcaagcagggc
atctggccgacttccctcacaacagctgctcccacatcccctcggactggagcttcagcc
ctgactgagcaatactggagtaaccgcttcctaaaccattttgcagaaattaaaaaaggg
ctccttggagaaatggctgattctagagatgggacagaaaacgtacagtacgtgcctgaa
gaataccaaagcaccagaaaggaagggctcaaaaacagcaatcaaagatgtggttatgtg
aaaggaacacaggagccaactgaaaaagccacaacagccgaagaatgtgagcaacaaaat
aaagcagtattggactag

>gi568815586f:110181790_110446467|GENSCAN_predicted_peptide_4|1103_aa
MAYHSSLMDPDTKLIGNMALLPIRSQFKGPAPRETKDTDIVDEAIYYFKANVFFKNYEIK
NEADRTLIYITLYISECLKKLQKCNSKSQGEKEMYTLGITNFPIPGEPGFPLNAIYAKPA
NKQEDEVMRAYLQQLRQETGLRLCEKVFDPQNDKPSKWLKTDTARSPRKPTGPSQTLWVT
LTVEGKVEWTNGLLKTHLTKLSLQLKKDSVKDRAPKLTNQAGSHTPPPIPLEAALKNIAH
YLSIPPPKIFAAATLYDYFVLFFLLTTTTGAGTRVSFYSGTSVVTSCLGVVPRVDPMDPG
DAAILESSLRILYRLFESVLPPLPAALQSRMNVIDHVRDMAAAGLHSNVRLLSSLLLTMS
NNNPTLGYSHFSTLRITHQLKAQWLCAISTHMLIECVEEKYQLLVYHADSLFHDKEYRNA
VSKYTMALQQKKALSKTSKVRPSTGNSASTPQSQCLPSEIEVKYKMAECYTMLKQDKDAI
AILDGIPSRQRTPKINMMLANLYKKAGQERPSVTSYKEVLRQCPLALDAILGLLSLSVKG
AEVASMTMNVIQTVPNLDWLSVWIKAYAFVHTGDNSRAISTICSLEKKSLLRDNVDLLGS
LADLYFRAGDNKNSVLKFEQAQMLDPYLIKGMDVYGYLLAREGRLEDVENLGCRLFNISD
QHAEPWVVSGCHSFYSKRYSRALYLGAKAIQLNSNSVQALLLKGAALRNMGRVQEAIIHF
REAIRLAPCRLDCYEGLIECYLASNSIREAMVMANNVYKTLGANAQTLTLLATVCLEDPV
TQEKAKTLLDKALTQRPDYIKAVVKKAELLSREQKYEDGIALLRNALANQSDCVLHRILG
DFLVAVNEYQEAMDQYSIALSLDPNDQKSLEGMQKMEKEESPTDATQEEDVDDMEGSGEE
GDLEGSDSEAAQWADQEQWFGMHPAESPCALQAPAAQHLLGRILILCSSSPRVTARLEEA
AEGVPWKSIEKPARGELEVPNSCRPDPRGPLGVNSAAVRGWEEPASKGLTCGFLRSQPYT
GLPVAGQGLRGAASQSLGGTTTVENSLAIQKFKQYYYPRIQCSTSGCTPEEVKAGTPKDC
TSMSTQHCPQQQKVETTHVSLDE

>gi568815586f:110181790_110446467|GENSCAN_predicted_CDS_4|3312_bp
atggcttaccactcttctctcatggatcctgataccaaactcatcggaaacatggcactg
ttgcctatcagaagtcaattcaaaggacctgcccccagagagacaaaagatacagatatt
gtggatgaagccatctattacttcaaggccaatgtcttcttcaaaaactatgaaattaag
aatgaagctgataggaccttgatatatataactctctacatttctgaatgtctgaagaaa
ctgcaaaagtgcaattccaaaagccaaggtgagaaagaaatgtatacgctgggaatcact
aattttcccattcctggagagcctggttttccacttaacgcaatttatgccaaacctgca
aacaaacaggaagatgaagtgatgagagcctatttacaacagctaaggcaagagactgga
ctgagactttgtgagaaagttttcgaccctcagaatgataaacccagcaagtggctgaag
actgacactgcccgatcacctcggaagcctacaggaccatcacagacgctttgggtaact
cttacagtggaaggaaaggtagaatggactaatggtcttttaaaaacacacctcaccaag
ctcagcctccaacttaaaaaggactctgtcaaggatagagccccaaaactcaccaaccaa
gcaggttcccacacaccacccccaatcccacttgaagcagccctgaaaaacatcgcccat
tatctctccataccacccccaaaaattttcgctgccgcaacactttacgactatttcgtt
ttattcttcttgttaacgaccacgacaggagcagggactcgagtttctttttattcgggc
acttcagtagttacctcttgcttgggggtggtgccgcgtgtggacccgatggaccccggc
gacgccgccattttggagtcttccctaaggatcctctaccggcttttcgagtcagtgctg
ccgccgctgcccgcggctttgcagagcaggatgaatgtgatagaccacgtgcgggacatg
gcggccgcggggctgcactccaacgtgcggctcctcagcagcttgttacttacaatgagt
aataacaacccgactctcgggtactcccacttttctacccttcgcatcacccaccaattg
aaagcgcagtggctgtgcgcaataagcactcacatgcttattgagtgtgttgaggaaaag
taccagcttttggtgtatcatgcagattctctctttcatgataaggaatatcggaatgct
gtgagtaagtataccatggctttacagcagaagaaagcgctaagtaaaacttcaaaagtg
agaccttcaactggaaattctgcatctactccacaaagtcagtgtcttccatctgaaatt
gaagtgaaatacaaaatggctgaatgttatacaatgctaaaacaagataaagatgccatt
gctatacttgatgggatcccttcaagacaaagaactcccaaaataaacatgatgctggca
aacctgtacaagaaggctggtcaggagcgcccttcagtcaccagctataaggaggtgctg
aggcagtgcccattagcccttgatgccattctaggcttgttgtccctttctgtaaaaggg
gcagaggtggcatccatgacaatgaatgtgatccaaaccgtgcctaacttggactggctc
tctgtgtggatcaaagcgtatgcttttgtgcacactggtgacaactcaagagcaatcagt
accatctgttcactagagaaaaaatccttattgcgagataacgtggacctattgggaagc
ttggcagatctgtacttcagagctggagacaataaaaactctgtcctcaagtttgaacag
gcacagatgttggatccttatctgataaaaggaatggatgtatatggctacctactggca
cgagaagggcggctagaggatgttgagaaccttggatgccgccttttcaatatctctgat
cagcatgcagaaccgtgggtggtttctggctgtcacagcttctatagcaaacgctactcc
cgggccctctatttaggagccaaggccattcagctgaacagtaatagtgttcaagctctg
ctacttaagggagcagcacttaggaacatgggcagagtccaagaagcaataatccacttt
cgggaggccatacggctcgcaccttgtcgcttagattgttatgaaggtcttatcgaatgt
tacttagcctccaacagtattcgagaagcaatggtaatggctaacaacgtttacaaaact
ctgggagcaaatgcacagacccttacccttttagccaccgtttgtcttgaagacccagtg
acacaggagaaagccaaaacattattagataaagccctgacccaaaggccagattacatt
aaggctgtggtgaaaaaagcagaactacttagcagagaacagaaatatgaagatggaatt
gctttgctgaggaacgcactggctaatcagagtgactgtgtcctgcatcggatcctagga
gatttccttgtagctgtcaatgagtatcaggaggcaatggaccagtatagtatagcacta
agtttggaccccaatgaccagaagtctctagaggggatgcagaagatggagaaggaggag
agtcccacggatgccactcaggaggaggatgtggacgacatggaagggagtggggaagaa
ggggacctggagggcagcgacagtgaggcggcccagtgggctgaccaggagcagtggttc
ggcatgcaccctgctgagagcccctgtgctctccaggctcctgcagcccagcacctgcta
ggacggatcctcattctctgcagctccagccccagggtgacagccaggttggaagaggcg
gctgaaggtgttccctggaaaagtattgagaaacctgcgagaggggagctcgaagttccc
aacagctgcaggcctgaccccagagggcccttgggagttaactctgcagctgtccgtggg
tgggaggaaccggcctccaaaggcctcacctgtggcttcctgcgttcccagccctacact
ggcttacctgtggcaggccagggcctgcgcggagctgcttcccagagcttaggtggcaca
accactgtggagaacagtctggcgattcagaaattcaaacagtactactaccctaggatc
cagtgttccacctccgggtgtacacccgaagaagtgaaagctggaacgccaaaagattgc
acgtccatgtccacgcagcactgtccacagcagcaaaaggtggaaacaacccacgtgtcc
ttagatgagtag