GENSCAN 1.0	Date run:  5-Nov-116	Time: 13:14:11

Sequence gi568815591r:64421164_64644433 : 223270 bp : 40.05% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +  12798  13215  418  2  1   80  -10   376 0.013  23.64
 1.02 Intr +  41895  42087  193  1  1   56   93   169 0.927  11.83
 1.03 Term +  48600  49029  430  0  1   12   54   774 0.819  60.19
 1.04 PlyA +  49781  49786    6                               1.05

 2.00 Prom +  57576  57615   40                              -3.95
 2.01 Init +  60252  60382  131  2  2   96   75   132 0.679  12.37
 2.02 Intr +  66535  66605   71  1  2   56   58    73 0.222  -0.99
 2.03 Intr +  69564  69650   87  1  0   58   56    78 0.159   0.62
 2.04 Intr +  70859  70988  130  0  1   27  111   126 0.577   7.63
 2.05 Term +  74307  74481  175  0  1   -2   37   239 0.213   6.05
 2.06 PlyA +  74698  74703    6                               1.05

 3.02 PlyA -  75211  75206    6                               1.05
 3.01 Sngl -  79702  79484  219  1  0   53   47   300 0.945  17.36
 3.00 Prom -  85472  85433   40                              -7.35

 4.03 PlyA -  85533  85528    6                               1.05
 4.02 Term - 101337  99998 1340  1  2   65   41  1969 0.823 180.58
 4.01 Init - 107756 107540  217  2  1   70   75    55 0.393   1.30
 4.00 Prom - 109168 109129   40                             -10.65

 5.00 Prom + 109739 109778   40                              -9.55
 5.01 Init + 111758 112161  404  1  2   33   75   221 0.159  11.45
 5.02 Term + 125612 125714  103  2  1  123   47    97 0.583   5.87
 5.03 PlyA + 126162 126167    6                               1.05

 6.07 PlyA - 126305 126300    6                               1.05
 6.06 Term - 141814 141603  212  2  2  100   44   205 0.667  13.77
 6.05 Intr - 142025 141883  143  1  2   61   30   185 0.663   9.08
 6.04 Intr - 142607 142520   88  0  1   41   93    76 0.291   1.51
 6.03 Intr - 148049 147949  101  1  2   67   57    86 0.312   2.23
 6.02 Intr - 148528 148269  260  1  2    9   25   225 0.217   3.64
 6.01 Init - 149274 148609  666  0  0  101   -3   949 0.386  80.36
 6.00 Prom - 151703 151664   40                              -8.65

 7.03 PlyA - 152408 152403    6                               1.05
 7.02 Term - 153674 153445  230  0  2   75   39   207 0.576  10.31
 7.01 Init - 156777 156657  121  0  1   68   74    77 0.676   4.70
 7.00 Prom - 157225 157186   40                              -5.55

 8.00 Prom + 159900 159939   40                              -5.65
 8.01 Init + 161556 161675  120  2  0   52   82   106 0.066   4.64
 8.02 Intr + 169936 170077  142  0  1   51   54   141 0.159   6.01
 8.03 Intr + 173713 173763   51  2  0  106   63    40 0.097   1.26
 8.04 Intr + 189999 190039   41  1  2   97   95    17 0.146   0.32
 8.05 Intr + 195242 195325   84  1  0   42   94    71 0.468   2.20
 8.06 Term + 200027 200470  444  1  0  -25   42   256 0.322   3.95
 8.07 PlyA + 201617 201622    6                               1.05

 9.05 PlyA - 203741 203736    6                               1.05
 9.04 Term - 205112 204982  131  0  2   48   38   130 0.790   1.36
 9.03 Intr - 206935 206808  128  0  2   67   77    84 0.689   4.60
 9.02 Intr - 211520 211383  138  1  0    8   95    89 0.269   0.26
 9.01 Init - 213094 212973  122  1  2   65   91    45 0.399   2.21

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815591r:64421164_64644433|GENSCAN_predicted_peptide_1|346_aa
MDVELTVEEINFPSVAYKNVIGARRASWRIISSIEQKEENKEGEDKLKMIWEYQQMIETE
LKLLCCDILDVLDKNLIPAANTGESKVFYYKMKGDYHRYLAEFATGNDRKEAVENSLVAY
KAASDIAMTELPPMHPTRLVSVPPSELKRDVGRERLFLHLWRKRFFQDLHPLSSKLHFNV
AAIDQVWLLSAWYVAGLNCDVLESKLKIIHTGDKPFKGDECHKAFNQFSTLTNCKRIHTG
EKPYKRKECGKGFNQFSHLTKHKKTHTGEKPYKCKECGKGFNQFSHLTKHKKTHTGKKSY
KCEECGKAFNQFANLIKHKRIHTGEKSYNMKNDEKLLPSPQTLLNT

>gi568815591r:64421164_64644433|GENSCAN_predicted_CDS_1|1041_bp
atggatgtggaactgacagttgaagaaataaacttcccatctgttgcatataagaatgta
attggagctagaagagcctcctggagaataatcagcagtattgaacagaaagaagaaaac
aaggaaggagaagacaagctaaaaatgatttgggaatatcagcaaatgattgagactgag
ctaaagttactctgttgtgacattctggatgtactggacaaaaacctcattccagcagct
aacactggcgagtccaaagttttctattataaaatgaaaggggactaccacaggtatctg
gcagaatttgccacaggaaatgacaggaaggaggctgtggagaacagcctagtggcttat
aaagctgctagtgatattgcaatgacagaacttccaccaatgcatcctactcgcttagta
tctgttccaccctcggaactgaagagagatgttggtagggagaggctcttccttcacctc
tggcggaaaagattttttcaggatcttcatcccctgtcgtcgaagctacactttaatgta
gcagctattgaccaagtgtggctactgagtgcctggtatgtggctggtctgaactgcgat
gttctagaaagtaaacttaagataattcatactggagacaaacccttcaaaggtgatgaa
tgtcacaaagcctttaaccagttctcaacccttaccaactgtaagagaattcatactgga
gagaaaccctacaaacgtaaagaatgtgggaaaggttttaaccagttttcacaccttact
aaacataagaaaactcatactggagagaaaccctacaaatgtaaagaatgtggcaaaggt
tttaaccagttttcacaccttactaaacataagaaaactcatactggaaagaaatcctac
aaatgtgaagaatgtggcaaagcttttaaccagtttgcaaaccttattaaacataaaaga
attcataccggagagaaatcctacaatatgaagaatgatgaaaagcttttacccagtcct
cagaccttactgaacacatga

>gi568815591r:64421164_64644433|GENSCAN_predicted_peptide_2|197_aa
MGVEKIIAQKIDRGRRAYKKHMGPTEHVTLRACCKESEPHEMIRLTLLIPVNQPVISDCC
SEETRGIDLAFQGRYPLNRFSPPVSKLLGTNVSGAQAEKRGKSGIPGEKGSQTSVNFLSV
QAIRCPSRYQALKGELPQARRQEQKNRKKLQEFEPKGWTVGVAEGEAAGTPQSGTAKPAP
EMDKKNKLSTKIRRNQS

>gi568815591r:64421164_64644433|GENSCAN_predicted_CDS_2|594_bp
atgggtgttgagaagatcatagcccaaaagattgacagaggccgcagggcatataagaaa
catatgggacctactgagcacgtcacacttagagcctgctgtaaggaatctgaaccccat
gaaatgataaggctaaccctgcttattcctgtgaaccaaccagtgatctctgactgctgc
tcagaagaaacaagagggatagacctagcttttcagggccgttaccccctgaaccggttc
agtccacctgtgtcgaagctacttggcacaaatgtgtcaggggctcaagctgaaaaacgc
ggaaaatcagggatccctggagaaaaggggtcccagacttccgtaaatttcctgtcggtt
caggccataaggtgcccaagccggtaccaagcactgaaaggtgaactgccacaagccaga
cgccaggaacagaagaaccgaaagaaactgcaagagtttgagccaaaaggatggactgtt
ggagtagctgagggtgaagctgccggaactcctcaaagtggaacagcaaagccagcacca
gagatggacaagaaaaacaaactatcaacgaaaattcgcagaaatcaaagttag

>gi568815591r:64421164_64644433|GENSCAN_predicted_peptide_3|72_aa
MERGSVLLVTLLAIVFDKVPTKPKTGGRREKRFDSESPTPRFYVEKPTAARGRQRGHNRS
VFVSSQNQPHYF

>gi568815591r:64421164_64644433|GENSCAN_predicted_CDS_3|219_bp
atggagcgaggatctgttctgttggtaacattgctggccattgtgtttgataaggttccc
acaaagccaaaaacaggaggaaggagggagaagagattcgattctgagtctcctactccc
aggttctacgtggagaagccaactgctgctcgaggtcggcaacgtggccacaaccgctca
gtcttcgtctcttcacaaaatcagccccattacttctga

>gi568815591r:64421164_64644433|GENSCAN_predicted_peptide_4|518_aa
MDSSSVLSTGDLMLSYCADLPPSGKWCFPESISCGRVERNPVGGALQLLRVYALCVQIRV
WVGKDHWVGAGLVIYSHFTEDLWPEHSIKDSFQKVILRGYGKCGHENLQLRISCKSVDES
KVFKEGYNELNQCLRTTQSKIFQCDKYVKVFHKFSNSNSHKKRNTGKKVFKCKECGKSFC
MLSHLTQHIRIHTRENSYKCEECGKVLNWFSELIKHKGIHMGEKPYKCEECGKAFNQSST
LIKHKKIHIEEKPFKCEECGKAFSLFSILSKHKIIHTGDKPYKCDECHKAFNWFATLTNH
KRIHTGEKPFKCEECGKDFNQFSNLTKHKKIHTGEKPYKCEECGKAFNQFANLTRHKKIH
TGEKSYKCEECGKAFIQSSNLTEHMRIHTGEKPYKCEECGKAFNGCSSLTRHKRIHTREN
TYKCEECGKGFTLFSTLTNHKVIHTGEKSYKCDECGNVFNWPATLANHKRIHAREKPYKC
EECGKAFNRSSHLTRHKKIHTGEKLYKPEKCDNNFDNT

>gi568815591r:64421164_64644433|GENSCAN_predicted_CDS_4|1557_bp
atggactcttccagtgttcttagcactggtgatttaatgctctcttattgtgctgatttg
cctccttctgggaagtggtgctttccagagagcatcagctgtggtagggtggagaggaac
ccagtgggtggggccttacaacttcttagagtatatgccctttgtgttcagatacgagtg
tgggtagggaaggaccactgggtaggggcagggctagttatatattctcatttcactgaa
gacctttggccagagcatagcataaaagattcttttcaaaaagtgatactgagaggatat
ggaaaatgtggacatgagaatttacaattaagaataagttgtaaaagtgtggatgagtct
aaggtgttcaaagaaggttataatgaacttaaccaatgtttgagaactacccagagcaaa
atatttcaatgtgataaatacgtgaaagtctttcataaattttcaaattcaaacagtcat
aagaaaagaaatactggaaagaaggttttcaaatgtaaagaatgtggcaaatcattttgc
atgctttcacatctaacacaacatataagaattcacactagagagaattcttacaaatgt
gaggaatgtggcaaagttcttaactggttctcagagcttattaaacataagggaattcat
atgggagagaaaccctacaaatgtgaggaatgtggcaaagcctttaaccaatcctcaacc
cttattaaacataagaaaattcatattgaagagaaacccttcaaatgtgaagaatgtggc
aaagcctttagtttattctcaatccttagtaaacataagataattcatactggagacaaa
ccttacaaatgtgatgaatgtcacaaagcctttaactggtttgcaacccttactaaccat
aagagaattcatactggagagaaacccttcaaatgtgaagaatgtggcaaagactttaac
cagttttcaaaccttactaaacataagaaaattcatactggagagaaaccctacaaatgt
gaagaatgtggcaaagcttttaaccagtttgcaaaccttactagacataagaaaattcat
actggagagaaatcctacaaatgtgaagaatgcggcaaagcttttatacagtcctcaaac
cttactgaacatatgagaattcatactggagagaaaccctacaaatgtgaagaatgtggc
aaagcttttaatgggtgctccagccttactcgacataagagaattcacactagagagaat
acctacaaatgtgaagaatgtggcaaaggctttactttattttcaacccttactaaccat
aaagtaattcatactggagagaaatcctacaaatgtgatgaatgtggcaatgtttttaac
tggcctgcaactcttgctaatcataagagaattcatgctagagagaaaccctacaaatgt
gaagaatgtggcaaagcttttaaccggtcctcacaccttactagacataagaaaattcat
actggtgagaaactctacaaacctgaaaaatgtgacaataattttgataacacctaa

>gi568815591r:64421164_64644433|GENSCAN_predicted_peptide_5|168_aa
MIISIDAEKAFDKIQHLFMIKTLSKIGIQGTYLHVIKVIYDKPTANIILNGKKVESIPFE
NWNKTRIPTLTTLLQHSTGSPSQSNQTREIKGIQISKEKVKLSLFAGDMIFYLENPKDSS
KKLLELIKELSKVSRCPPQAQTPAISATIMAIWATLTCLYQTRTEQAL

>gi568815591r:64421164_64644433|GENSCAN_predicted_CDS_5|507_bp
atgatcatctcaatagatgcagaaaaagcatttgacaaaatccagcatctctttatgatt
aaaactctcagcaaaattggcatacaagggacatacctccacgtaataaaagtcatctat
gacaaacccacagccaacataatactgaatgggaaaaaagttgaaagcattccctttgag
aactggaacaagacaaggatacccactctcacaactcttcttcaacatagcactggaagt
cctagccagagcaatcagacaagagaaataaagggcatccaaatcagtaaagagaaagtc
aaactgtcactgtttgctggtgatatgatcttttatcttgaaaaccccaaagactcctcc
aaaaaactcctagaactgataaaagaattgagcaaagtttccaggtgccctccccaggca
cagacaccagcaatttctgctacaataatggcaatatgggccacactgacctgtctctac
caaacccgaacagaacaggccctgtga

>gi568815591r:64421164_64644433|GENSCAN_predicted_peptide_6|489_aa
MPPAAPGARLRLLAAAALAGLAVISRGLLSQRLEFNSPADNYTVCEGDNATLSCFMDEHV
TRVAWLNRSNILYAGNDRRTRDPRVRLLINTPEEFSILVTEVGLGDEGLYTCSFQTRHQP
YTTQVYLIVHVPARVVNISSPVMVNEGGNVNLLCLAVGRPEPTVTWRQLRDGFTSEGEIL
EISDILRGQAGEYECVTHNGVNSAPDSRRVLVTVNYPPTITDWYKDDRLLSSGTAEGLKV
QMERTRSMLLFANMSARHYGNYTCCAANRLGASSASMRLLCPGSLENSAPRPPGPLALLS
ALGWLWWRIHSRYPFTFPIVTHSRHPIPLSLSSGCQQACVGVELHFNVAAIGHLWLLGAW
NVAGLNCDVVERALGGGALNIIQSGTRGWDPSNQARSWSGQDGFRDLAGPLSLAAAGAPG
IGRCTAKMPGPPGSLEMVRVRSDTPREGEGLVGTGRKWLWQDSRLQALGSKIRGPSCPWR
SSVLSPLQP

>gi568815591r:64421164_64644433|GENSCAN_predicted_CDS_6|1470_bp
atgccccccgctgcgcccggggcccggctccggcttctcgccgccgccgccctggccggc
ttggccgtcatcagccgggggctgctctcccagaggctggagttcaactctcctgccgac
aactacacagtgtgtgaaggtgacaacgccaccctcagctgcttcatggacgagcatgtg
acccgcgtggcctggctgaaccgctccaacatcctgtacgccggcaacgaccgcaggacc
agggacccgcgggtgcggctgctcatcaacacccccgaggagttctccatcctcgtcacc
gaggtggggctcggcgacgagggcctctacacctgctccttccagacccgccaccagccg
tacaccactcaggtctacctcattgtccacgtccctgcccgcgttgtgaacatctcgtcg
cctgtgatggtgaatgagggaggtaatgtgaacctgctttgcctggccgtggggcggcca
gagcccacggtcacctggagacagctccgagacggcttcacctcggagggagagatcctg
gagatctctgacatcctgcggggccaggccggggagtatgagtgcgtgactcacaacggg
gttaactcggcgcccgacagccgccgcgtgctggtcacagtcaactatcctccgaccatc
acggactggtataaggatgacagactactgagcagcggcacggccgagggcctgaaggtg
cagatggagcgcactcgctcgatgcttctctttgccaacatgagcgcccggcattacggc
aactatacgtgttgcgccgccaaccggctgggagcgtccagcgcctccatgcggctcctg
tgcccaggatccctggagaactcagccccgaggcccccagggcccctggccctcctctcc
gccctgggctggctgtggtggagaatccattctcgctacccgttcacgtttccgattgtg
acccactcccgccaccccatacccctctctcttagctcaggctgtcaacaggcttgtgtg
ggtgtggagctgcacttcaatgtggcagctattggccacctgtggctactgggtgcatgg
aatgtggctggtctgaactgcgatgtggtagaaagggcattagggggtggcgccctaaac
attatccaatcagggacgcggggctgggacccgtccaatcaggcacgcagctggagcgga
caggacggcttccgggatttggcggggcctttgtctctagctgctgcgggagctccaggt
attgggagatgcacagctaagatgccaggaccacctggaagcctagaaatggtgagagtg
cggtccgacaccccgagagagggggaggggctggttggaaccggtcggaagtggctgtgg
caggactccaggctccaagcactgggctccaaaatccgcggcccgagttgtccttggcgc
agctcggtcctcagtccccttcagccataa

>gi568815591r:64421164_64644433|GENSCAN_predicted_peptide_7|116_aa
MTLKEHAAFKHLFNKAHLAPPLIHLTLSGHSTCFREHRVGGFPGGPGILAVDLPIPTGHR
DTEAGPLGAEDTEQRRKDLELRLQPETKAAPNLESRPVHSSCVPDWMDPSPESLIG

>gi568815591r:64421164_64644433|GENSCAN_predicted_CDS_7|351_bp
atgactcttaaggagcatgctgccttcaagcatctgtttaacaaagcacatcttgcaccg
cccttaatccatttaaccctgagtggacacagcacatgtttcagagagcacagggttggg
ggcttcccagggggtcctggcatcttagctgtggatctcccaatacctacaggtcacagg
gacacagaagctgggcctctaggagcagaagacacagaacagagaagaaaagacctggag
ctacgactgcagccagagacaaaggccgcgccaaatctcgaaagccgtcctgtccactcc
agctgcgtgcctgattggatggatcccagcccagagtccctgattggataa

>gi568815591r:64421164_64644433|GENSCAN_predicted_peptide_8|293_aa
MCAGAPFTRPCHPPRPARRGPGSWGVGAVRTLRAGPPLLSVQSYPGGLQALLQLRPHSLT
RHWSDVVAIGVHVICELYAVGCASVADAYKTGEKGESKKLERNRREMVEYHWALHPSDVR
KEYHTLTYGIKSSGCTQCVIAEPSAQKLQKQAIESDSTLENLLKVATSAFYNRDQEKTQE
KARKLRRRTKALVVALQACNVQDFQGSSAHCYQSGKSGYFKKQCPSIKKKPPQPSAGCGR
DTREQTAPRDEVTRFRTSLTDRLAGIMGPRDPTPSSSSSNCHYSLGSQGDSGN

>gi568815591r:64421164_64644433|GENSCAN_predicted_CDS_8|882_bp
atgtgtgcgggcgcacccttcacgcggccctgtcacccgccgcgccctgcccgccgaggc
cctggcagctggggggtgggcgctgttcggacgctgcgcgcgggaccacctctgctctcg
gtgcagtcctacccaggaggcctgcaggctctcctgcagctcaggcctcactctctgacg
cggcactggagtgatgttgtggcaattggtgtccatgtaatatgtgagctgtatgctgtg
ggctgtgcctcagtagcagatgcttataagacaggagaaaagggagaaagcaaaaagttg
gaaagaaacagaagggagatggtggaatatcactgggccttgcatccaagtgatgtcaga
aaggagtatcacactctcacatatggtataaagtcttcaggttgtacacagtgtgtcatt
gcagagcccagtgcacagaaactacaaaagcaggctatagaatcagatagcaccttagag
aacctcctgaaggtagccacttcagccttttataatagggaccaggagaaaacccaagag
aaagcgaggaaactcaggagaaggacaaaggctctagtagttgctttgcaagcctgcaat
gtccaggatttccaaggttcatctgctcattgctatcagtctggcaagtcagggtacttt
aagaagcagtgcccaagcatcaagaagaagccacctcaaccctctgcaggctgtggcaga
gacactagagagcaaactgcccccagagatgaggtcactagattcagaaccagtctcaca
gatcgtttggcaggaataatgggtcctagggacccaacccccagctccagcagctcaaac
tgccattatagcctaggatcccaaggtgattctggaaattaa

>gi568815591r:64421164_64644433|GENSCAN_predicted_peptide_9|172_aa
MGPEIHHNISNGISPSKRRALHQIVDECRDMAQCFLQPGSRFRVEESSINYGIRSWAKQY
VTTTTVDRSQEKEECHIIKVIAPRYTRHGTGKEKSANISVLDPEVYHNLSYGQSSGNRGK
PHQIDNGSLDHTQQSHSEVASLSGEIPEVCCPALRRVMTRTHTRNEFQEQKV

>gi568815591r:64421164_64644433|GENSCAN_predicted_CDS_9|519_bp
atgggcccagagatacatcacaatatctccaatgggataagcccaagcaagagaagagca
ctccaccaaatagttgatgagtgcagagatatggcacaatgcttcctgcagccaggatcc
aggtttagggtagaagagagtagcataaactatggaatcaggtcttgggcaaagcaatat
gtcacaacaaccactgtggacaggtcccaggaaaaagaggagtgtcacattatcaaggtg
atagccccaaggtatacaaggcatggcacaggcaaggagaagagtgccaacatctcagtg
ctggacccagaggtatatcacaatctttcttatgggcagagttcaggtaatagaggaaag
ccacatcaaatagacaatgggtccttagaccacacgcagcagagtcatagtgaagtggct
tcattgtctggggaaatacccgaagtttgttgtcctgcactgagaagagtaatgactcga
acacacacacggaatgagtttcaggagcagaaagtttaa