GENSCAN 1.0	Date run:  5-Nov-116	Time: 12:50:20

Sequence gi568815597r:193080297_193281562 : 201266 bp : 36.37% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   1068   1184  117  2  0  117   81   106 0.992  12.54
 1.02 Intr +   1890   2003  114  2  0   71  110    84 0.996   8.62
 1.03 Intr +   2266   2412  147  0  0   49   93   119 0.945   8.01
 1.04 Term +   4283   4435  153  1  0   96   41   161 0.999   9.14
 1.05 PlyA +   5373   5378    6                               1.05

 2.06 PlyA -   5634   5629    6                               1.05
 2.05 Term -  14179  14118   62  2  2   53   48    59 0.196  -4.61
 2.04 Intr -  16463  16352  112  2  1  111   69     9 0.443   0.33
 2.03 Intr -  17464  17288  177  1  0   74   74    92 0.726   5.59
 2.02 Intr -  20908  20845   64  0  1   82   89    93 0.539   6.60
 2.01 Init -  25086  24968  119  0  2   71   55   138 0.549   6.53
 2.00 Prom -  27747  27708   40                              -7.65

 3.00 Prom +  28850  28889   40                              -6.45
 3.01 Init +  33002  33241  240  1  0   82   11   132 0.273   2.82
 3.02 Intr +  41710  42035  326  0  2   39   98   356 0.622  25.35
 3.03 Intr +  44816  44921  106  2  1   68   87    23 0.613  -0.50
 3.04 Intr +  49878  49947   70  2  1   58   67    95 0.882   2.24
 3.05 Intr +  55095  55157   63  1  0   75   95    46 0.730   1.77
 3.06 Intr +  55241  55293   53  0  2   82   88   116 0.971   8.71
 3.07 Intr +  57789  57877   89  2  2   50   82   104 0.861   3.85
 3.08 Intr +  61554  61770  217  0  1    4   86   293 0.840  18.28
 3.09 Intr +  67571  67669   99  1  0   50   83    82 0.868   3.29
 3.10 Term +  83944  84006   63  0  0   96   43   111 0.916   4.31
 3.11 PlyA +  84288  84293    6                               1.05

 4.02 PlyA -  85960  85955    6                               1.05
 4.01 Sngl - 101227  99998 1230  1  0   94   43   416 0.550  33.25
 4.00 Prom - 122485 122446   40                              -3.35

 5.00 Prom + 130282 130321   40                              -3.65
 5.01 Init + 136124 136234  111  1  0   58   41   130 0.151   5.56
 5.02 Term + 136851 136922   72  2  0   48   50    95 0.108  -1.37
 5.03 PlyA + 137640 137645    6                               1.05

 6.00 Prom + 138496 138535   40                              -1.95
 6.01 Init + 139297 139438  142  0  1   95    6   110 0.029   3.84
 6.02 Intr + 150406 150475   70  2  1   52   98     7 0.012  -4.58
 6.03 Intr + 152697 152858  162  0  0   84   99   116 0.917  10.47
 6.04 Intr + 155960 156060  101  2  2  106   69    39 0.860   2.63
 6.05 Intr + 161280 161652  373  1  1   19   74   199 0.346   4.80
 6.06 Intr + 167110 167246  137  1  2  136   55    -7 0.443   0.09
 6.07 Intr + 169434 169575  142  1  1   89   91   128 0.619  11.69
 6.08 Term + 182830 182872   43  1  1   70   47    48 0.008  -5.45
 6.09 PlyA + 183187 183192    6                               1.05

 7.03 PlyA - 183421 183416    6                               1.05
 7.02 Term - 192730 192131  600  1  0   13   36   281 0.806   8.94
 7.01 Init - 194724 194590  135  0  0   62   91    48 0.677   2.69

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl + 139297 139644  348  0  0   95   44   110 0.888   3.09
S.002 Sngl - 145829 145620  210  2  0   44   53   173 0.849   4.34


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597r:193080297_193281562|GENSCAN_predicted_peptide_1|176_aa
TVEPTGKRFLLAVDVSASMNQRVLGSILNASTVAAAMCMVVTRTEKDSYVVAFSDEMVPC
PVTTDMTLQQVLMAMSQIPAGGTDCSLPMIWAQKTNTPADVFIVFTDNETFAGGVHPAIA
LREYRKKMDIPAKLIVCGMTSNGFTIADPDDRGMLDMCGFDTGALDVIRNFTLDMI

>gi568815597r:193080297_193281562|GENSCAN_predicted_CDS_1|531_bp
acagttgaaccaactggaaaacgtttcttactagctgttgatgtcagtgcttctatgaac
caaagagttttgggtagtatactcaacgctagtacagttgctgcagcaatgtgcatggtt
gtcacacgaacagaaaaagattcttatgtagttgctttttccgatgaaatggtaccatgt
ccagtgactacagatatgaccttacaacaggttttaatggctatgagtcagatcccagca
ggtggaactgattgctctcttccaatgatctgggctcagaagacaaacacacctgctgat
gtcttcattgtattcactgataatgagacctttgctggaggtgtccatcctgctattgct
ctgagggagtatcgaaagaaaatggatattccagctaaattgattgtttgtggaatgaca
tcaaatggtttcaccattgcagacccagatgatagaggcatgttggatatgtgcggcttt
gatactggagctctggatgtaattcgaaatttcacattagatatgatttaa

>gi568815597r:193080297_193281562|GENSCAN_predicted_peptide_2|177_aa
MIWRRAALAGTRLVWSRSGSAGWLDRAAGAAGAAAAAASGMESNTSSSLENLATAPVNQI
QETISDNCVVIFSKTSCSYCTMAKKLFHDMNVNYKVVELDLLEYGNQFQDALYKMTGERT
VPRIFVNGTFIGGATDTHRLHKEGKLLPLVHQCYLKKSIKGRDKLLQGIETLTSTRL

>gi568815597r:193080297_193281562|GENSCAN_predicted_CDS_2|534_bp
atgatttggcgccgcgcggcgctggcggggacgcggctggtttggagcaggagcggctcg
gcaggctggcttgacagggcggcgggagctgcgggagctgcggcagctgcggcctctggg
atggagagcaatacatcatcatctttggagaatttagcgacggcgcctgtgaaccagatc
caagaaacaatttctgataattgtgtggtgattttctcaaaaacatcctgttcttactgt
acaatggcaaaaaagcttttccatgacatgaatgttaactataaagtggtggaactggac
ctgcttgaatatggaaaccagttccaagatgctctttacaaaatgactggtgaaagaact
gttccaagaatatttgtcaatggtacttttattggaggtgcaactgacactcataggctt
cacaaagaaggaaaattgctcccactagttcatcagtgttatttaaaaaaaagtattaag
ggtagagacaagttacttcaaggtatagaaacactgaccagtactcgactgtga

>gi568815597r:193080297_193281562|GENSCAN_predicted_peptide_3|441_aa
MGPGSPLCKHRELPETPPLWAGWLEFLQGLLPMWLSQCCGYVHVFSYLCDELQQLLRISR
KIALQFGILSKNMQECSGPVRGVLGGLGGYCPCCCRRRGRLLVLLLLVRRGGEGGGGRGR
GDKRRRRQARRQRRRPEPAEARGGKMADVLSVLRQYNIQKKEIVVKGDEVIFGEFSWPKN
VKTNYVVWGTGKEGQPREYYTLDSILFLLNNVHLSHPVYVRRAATENIPVVRRPDRKDLL
GYLNGEASTSASIDRSAPLEIGLQRSTQVKRAADEVLAEAKKPRIEDEECVRLDKERLAA
RLEGHKEGIVQTEQIRSLSEAMSVEKIAAIKAKIMAKKRSTIKTDLDDDITALKQRSFVD
AEVDVTRDIVSRERVWRTRTTILQSTGKNFSKNIFAILQSVKAREEGRAPEQRPAPNAAP
VIKGEITAGDEQQCGGFVAYG

>gi568815597r:193080297_193281562|GENSCAN_predicted_CDS_3|1326_bp
atggggccaggctccccgctctgcaaacatcgtgaacttcctgagactccacccctgtgg
gcagggtggttggagtttcttcagggactccttcccatgtggctgtctcaatgctgtggc
tacgttcatgtatttagttacctatgtgatgagctacagcaactactcagaatcagcaga
aagatagctctgcaatttggcatcctcagcaagaatatgcaggaatgctcagggcctgtg
cgcggggtcctcggcggcctgggtggctactgcccctgctgctgtcgtaggcgaggacgg
ctgttagtgctgctgctgttggttcgtcgcggcggcgaaggaggaggaggaagagggcga
ggcgacaagagaagaaggaggcaggcgcggcggcagcggcggcgccccgagccggcggag
gcgaggggggggaagatggcggacgtgcttagcgtcctgcgacagtacaacatccagaag
aaggagattgtggtgaagggagacgaagtgatcttcggggagttctcctggcccaagaat
gtgaagaccaactatgttgtttgggggactggaaaggaaggccaacccagagagtactac
acattggattccattttatttctacttaataacgtgcacctttctcatcctgtttatgtc
cgacgtgcagctactgaaaatattcctgtggttagaagacctgatcgaaaagatctactt
ggatatctcaatggtgaagcgtcaacatcggcaagtatagacagaagcgctcccttagaa
ataggtcttcagcgatctactcaagtcaaacgagctgcagatgaagttttagcagaagca
aagaaaccacgaattgaggatgaagagtgtgtgcgccttgataaagagagattggctgcc
cgtttggagggtcacaaagaagggattgtacagactgaacagattaggtctttgtctgaa
gctatgtcagtggaaaaaattgctgcaatcaaagccaaaattatggctaagaaaagatct
actatcaagactgatctagatgatgacataactgcccttaaacagaggagttttgtggat
gctgaggtagatgtgacccgagatattgtcagcagagagagagtatggaggacacgaaca
actatcttacaaagcacaggaaagaatttttccaagaacatttttgcaattcttcaatct
gtaaaagccagagaagaagggcgtgcacctgaacagcgacctgccccaaatgcagcacct
gtgatcaaaggagaaataactgctggtgatgaacagcagtgtggaggttttgttgcctat
ggttga

>gi568815597r:193080297_193281562|GENSCAN_predicted_peptide_4|409_aa
MTWNAKRSLFRTHLIGVLSLVFLFAMFLFFNHHDWLPGRAGFKENPVTYTFRGFRSTKSE
TNHSSLRNIWKETVPQTLRPQTATNSNNTDLSPQGVTGLENTLSANGSIYNEKGTGHPNS
YHFKYIINEPEKCQEKSPFLILLIAAEPGQIEARRAIRQTWGNESLAPGIQITRIFLLGL
SIKLNGYLQRAILEESRQYHDIIQQEYLDTYYNLTIKTLMGMNWVATYCPHIPYVMKTDS
DMFVNTEYLINKLLKPDLPPRHNYFTGYLMRGYAPNRNKDSKWYMPPDLYPSERYPVFCS
GTGYVFSGDLAEKIFKVSLGIRRLHLEDVYVGICLAKLRIDPVPPPNEFVFNHWRVSYSS
CKYSHLITSHQFQPSELIKYWNHLQQNKHNACANAAKEKAGRYRHRKLH

>gi568815597r:193080297_193281562|GENSCAN_predicted_CDS_4|1230_bp
atgacctggaatgccaaaaggtctctgttccgcactcatcttattggagtactttctcta
gtgtttctttttgctatgtttttgtttttcaatcatcatgactggctgccaggcagagct
ggattcaaagaaaaccctgtgacatacactttccgaggatttcggtcaacaaaaagtgag
acaaaccacagctcccttcggaacatttggaaagaaacagtccctcaaaccctgaggcct
caaacagcaactaactctaataacacagacctgtcaccacaaggagttacaggcctggag
aatacacttagtgccaatggaagtatttacaatgaaaaaggtactggacatccaaattct
taccatttcaaatatattattaatgagcctgaaaaatgccaagagaaaagtcctttttta
atactactaatagctgcagagcctggacaaatagaagctagaagagctattcggcaaact
tggggcaatgaaagtctagcacctggtattcaaatcacaagaatatttttgttgggctta
agtattaagctaaatggctaccttcaacgtgcaatactggaagaaagcagacaatatcat
gatataattcaacaggaatacttagatacgtactataatttgaccattaaaacactaatg
ggcatgaactgggttgcaacatactgtccacatattccatatgttatgaaaactgacagt
gacatgtttgtcaacactgaatatttaatcaataagttactgaagccagatctgcctccc
agacataactatttcactggttacctaatgcgaggatatgcacccaatcgaaacaaagat
agcaagtggtacatgccaccagacctctacccaagtgagcgttatcctgtcttctgttct
ggaactggttatgttttttctggagatctggcagaaaagatttttaaagtttctttaggt
atccgccgtttgcacttggaagatgtatatgtagggatctgtcttgccaagttgagaatt
gatcctgtaccccctcccaatgagtttgtgttcaatcactggcgagtctcttattcgagc
tgtaaatacagccacctaattacctctcatcagttccagcctagtgaactgataaaatac
tggaaccatttacaacaaaataagcacaatgcctgtgccaacgcagcaaaagaaaaggca
ggcaggtatcgccaccgtaaactacattag

>gi568815597r:193080297_193281562|GENSCAN_predicted_peptide_5|60_aa
MSSEFESVEKNPTNRKPPNPKPDRLTAEFYQMYKGELLLLKPLGEHTDGQAVELRLHGIV

>gi568815597r:193080297_193281562|GENSCAN_predicted_CDS_5|183_bp
atgagttccgaatttgaatcagtagaaaagaatcctaccaaccggaagccccccaacccc
aaaccagacagattaacagctgaattctaccagatgtataaaggagagctgctgctgctg
aaacctctaggggagcacaccgacgggcaggctgtggagctcagactccacggcattgtc
tag

>gi568815597r:193080297_193281562|GENSCAN_predicted_peptide_6|389_aa
MDAAGSHYPNKLTEKQKSKYHMFYVGARHRVHVGHKEGNKRHQGLLEVVQYNGVAHNHCV
LDLMNCSRVNRFVPSDEKKKQGCQRENETLIQRRKDQMQPGGTAISVTVPYRVVDQPLKL
MPQDWDRVVAVFVQGPAWQFKGWPWLLPDGSPVDIFAKKVHTVTNCGFDGLDRTVRRPTG
GVCGWVTVVVVVAGWLGVSSAPGKSAQVPTVEDVAGPPSGPKMCAQALLGRQKGRTEPSQ
VGLSSGLQVAGRGGVFFRSLAVCYQHLGPAAGESSVVFSGNGQPLFFLRHSSIEIKPINN
PTVTSKCLNERKSCTSLILNQKLDMIKLIKAFHLKYDEVRLDPNVQKWDVTVLELSYHKR
HLDRPVFLRFWETLDSPSSCGNYALSKEF

>gi568815597r:193080297_193281562|GENSCAN_predicted_CDS_6|1170_bp
atggatgcagctggaagccattatcctaacaaattaacagagaaacagaaatccaaatac
cacatgttctacgtgggagctagacatcgagtacatgttggacacaaagagggaaacaaa
agacaccagggcctacttgaggtggtacaatataatggtgtagctcacaatcattgtgtc
ttagatttgatgaactgcagtagggtgaacagatttgtcccatcagatgaaaagaagaaa
caaggttgtcaacgagaaaatgaaactctaatacaaagaagaaaagaccagatgcaacca
gggggcactgcaattagtgttacagtaccttatagagtagtagaccagccccttaaactt
atgcctcaagactgggaccgcgttgtagccgtttttgtgcagggtcctgcatggcagttc
aaaggttggccatggcttttgcctgatggatcaccagttgatatatttgctaaaaaggtc
cacactgttaccaattgtggctttgatgggctggacaggacagtgcgcaggcccacaggg
ggtgtgtgcgggtgggtaacagttgtggtggtagtggcaggttggttgggcgtgtcttct
gcccctgggaaaagtgctcaggtgccaacagtggaggatgttgcagggccaccctcaggc
cccaaaatgtgtgctcaggcactgctagggcggcagaaggggaggacagagcccagccaa
gttggcctgtcctcaggcctccaggtcgcaggcaggggtggggtgttcttcaggtccttg
gcagtgtgctaccagcacttgggtcctgctgctggggagagcagcgttgttttcagtggc
aacggccagcctctctttttcctgagacacagcagtattgaaattaagcctattaataac
cctacagtgacctccaagtgtttaaatgaaaggaagagttgcacatctctcattttaaac
caaaagttagacatgattaagcttattaaagccttccatctgaagtatgatgaagttcgt
ctggatccaaatgttcagaaatgggatgtaacagtattagaactcagctatcacaaacgt
catttggatagaccagtgttcttacggttttgggaaacattggacagcccaagttcctgt
ggcaactatgccctctccaaagagttctga

>gi568815597r:193080297_193281562|GENSCAN_predicted_peptide_7|244_aa
MQIQEAQRTSGKSITKRSSPRPTVIRLSKVKTKERILRAVRHKHQVENDGTLPNSFYEAS
ITLIPKPGKDITKKENYRQISLMNIDAKILNKILANQIQQHIKKIIHHDQVGFIPGIQGW
FNIHKSINVVYHINRIKNKNHMIISINAEKVFDKIQHPFMIKNLSKISIQGTYLNVVKAI
YDKPTANIILNGEKLKAFPPRTGTIQGCPLPPLLFNTVLEVLARAIRQEKEIKGIQIGKE
EVKL

>gi568815597r:193080297_193281562|GENSCAN_predicted_CDS_7|735_bp
atgcaaatacaagaagcacaaagaacatctgggaaatccatcacaaaaagatcatcacct
aggcccactgtcatcagattatccaaagttaagacaaaggaaagaatcttaagagctgtg
agacacaagcaccaggtagagaatgatggaaccctccctaattcattctatgaagccagc
atcaccctaataccaaaaccaggaaaggatataaccaaaaaagaaaactacagacagata
tccttgatgaacatagatgctaaaatccttaacaaaatactagctaaccaaatccaacaa
catatcaaaaagataatccaccatgatcaagtgggtttcataccagggattcagggatgg
tttaatatacacaagtcaataaatgtggtataccacataaacagaattaaaaacaaaaat
cacatgatcatctcaataaatgcagaaaaagtatttgacaaaatccagcatccctttatg
attaaaaatctcagcaaaatcagcatacaagggacatacctcaatgtagtaaaagccatc
tatgacaaacccacagccaacataatactaaatggggaaaagttgaaagcattccctccg
agaaccggaacaatacaaggatgcccactcccaccactcctcttcaacacagtactggaa
gttctagccagagcaatcagacaagagaaagaaataaagggtatccaaattggtaaagag
gaagtcaaactgtaa