GENSCAN 1.0	Date run:  5-Nov-116	Time: 08:25:58

Sequence gi568815585f:49911941_50113161 : 201221 bp : 39.10% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.06 PlyA -   1578   1573    6                               1.05
 1.05 Term -   3220   3123   98  2  2  102   42    33 0.369  -2.75
 1.04 Intr -   9640   9538  103  1  1  105  103    17 0.690   3.73
 1.03 Intr -  16145  15979  167  0  2   62   89   148 0.933  11.06
 1.02 Intr -  19194  19078  117  1  0   54   77    67 0.718   1.72
 1.01 Init -  24295  24190  106  1  1   91   82   131 0.988  11.27
 1.00 Prom -  39824  39785   40                              -1.85

 2.04 PlyA -  40281  40276    6                               1.05
 2.03 Term -  43582  43011  572  2  2   19   48   248 0.736   7.51
 2.02 Intr -  44513  44271  243  0  0 -209   53   428 0.670   6.15
 2.01 Init -  45448  45352   97  1  1   78   66    53 0.321   2.62
 2.00 Prom -  46496  46457   40                              -6.25

 3.06 PlyA -  46570  46565    6                               1.05
 3.05 Term -  66434  66307  128  0  2  133   43    86 0.834   6.06
 3.04 Intr -  77120  76976  145  2  1   57   99    44 0.552   1.33
 3.03 Intr -  82021  81853  169  0  1   67  108   164 0.980  15.33
 3.02 Intr -  85387  85134  254  1  2   87   88   314 0.236  26.61
 3.01 Init -  89556  89542   15  0  0   30  111     5 0.311  -2.63
 3.00 Prom -  89678  89639   40                              -6.45

 4.00 Prom +  94938  94977   40                              -4.75
 4.01 Init + 100001 101122 1122  1  0   63   61   672 0.043  56.26
 4.02 Intr + 104034 104131   98  2  2   87   68    49 0.333   0.69
 4.03 Term + 108274 108514  241  1  1  109   45   168 0.999   9.11
 4.04 PlyA + 108948 108953    6                               1.05

 5.00 Prom + 111232 111271   40                              -5.65
 5.01 Init + 139919 140165  247  1  1  114   86    23 0.549   2.51
 5.02 Term + 141089 141186   98  0  2  115   39    85 0.626   3.45
 5.03 PlyA + 143140 143145    6                               1.05

 6.00 Prom + 162983 163022   40                              -4.15
 6.01 Init + 169443 169639  197  2  2   79   38   194 0.607  11.95
 6.02 Intr + 170231 170304   74  2  2   87   39    73 0.175   0.43
 6.03 Intr + 170440 170617  178  2  1  -12   91   160 0.110   4.36
 6.04 Intr + 182699 182792   94  2  1   43   50    89 0.079  -0.35
 6.05 Term + 187498 187908  411  0  0   39   45   227 0.618   7.76
 6.06 PlyA + 188304 188309    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl + 100001 101224 1224  1  0   63   38   683 0.870  56.35


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815585f:49911941_50113161|GENSCAN_predicted_peptide_1|196_aa
MATSVLCCLRCCRDGGTGHIPLKEMPAVQLDTQHMGTDVVIVKNGRRICGTGGCLASAPL
HQNKSYFEFKIQSTGIWGIGVATQKVNLNQIPLGRDMHSLVMRNDGALYHNNEEKNRLPA
NSLPQEGDVVGITYDHVELNVYLNGKNMHCPASGIRGTVYPVVYVDDSAILDCQFSEFYH
TPPPGFEKILFEQQIF

>gi568815585f:49911941_50113161|GENSCAN_predicted_CDS_1|591_bp
atggccacctcggtgttgtgctgcctgcggtgctgcagagacggggggactggccacatc
cctctgaaggagatgccggccgtgcagctggacacgcagcacatgggaacagatgttgtt
attgtaaagaatggaagaagaatatgtggaacaggaggttgtttagccagcgcaccttta
catcaaaacaaaagctattttgaattcaaaatccagtccacaggaatctggggtattggt
gttgcaactcagaaggttaacttgaatcagattcctcttggccgagatatgcacagtctg
gtgatgagaaatgatggagccctttaccacaacaatgaagagaaaaataggctgccagca
aacagtcttccgcaggaaggagatgtggtgggtattacttatgaccatgtcgaattaaat
gtatacttgaatggaaaaaacatgcattgtccagcatcaggtatacgagggacagtgtat
ccagttgtttatgttgatgacagtgcaattttggattgccagttcagtgagttttatcat
acgcctccacctggttttgaaaaaatattatttgaacagcaaatcttctga

>gi568815585f:49911941_50113161|GENSCAN_predicted_peptide_2|303_aa
MISLVDLKLCWSNNGHSLCKEESLSPILPTSDGEERRRKRKKRKRKKRKQKQQQQQEAAA
PAEADAEATAAEAAAEEAAARKEEEEEGEEGEGNGEEEEEKAAAAARGDWSQQEKACKSS
LQAILFGHAKLEPGRLPRPTQCRVEATVLVGTNSPLDNPLWSISWSLWQKPVGTSQQQPL
GLWTREFPLEGHLLTRNETFTEATPLIPEIGMLSQMMSEEHSNGDGSAQKSSMTQWKWFI
EDHATQGMQRISFPLGLTLELCEKLLDSTVPNKQLSTDQTRASWFMDGNSKAQNARKNCS
VSQ

>gi568815585f:49911941_50113161|GENSCAN_predicted_CDS_2|912_bp
atgatctccctggttgatcttaagctctgctggtcaaataacggacattccttgtgtaaa
gaggagagcctctcaccaatcctccctaccagtgatggagaagaaaggagaagaaaaagg
aagaagaggaagaggaagaagaggaagcagaagcagcagcagcagcaagaagcagcagca
ccagcagaagcagatgcagaagcaacagcagcagaagcagcagctgaagaagcagcagca
agaaaggaggaggaggaggaaggggaggagggggaggggaatggggaggaggaggaggag
aaggcagcggcggcagcaagaggggactggtcccagcaggagaaggcatgtaaatcgtcc
cttcaagcaatattatttggacatgctaagctggaaccagggagactgcccaggcccaca
cagtgcagagtagaagctacggtgctggtagggacaaattctccacttgataaccctcta
tggagcatttcctggagcttatggcaaaagcctgtgggcacctcccagcaacaaccactg
ggactttggactagagaatttccacttgaagggcatttactgactcgcaatgaaacattt
actgaagccaccccactgatacctgaaataggcatgctgtctcagatgatgtcagaggaa
cattctaatggggatggcagtgcccagaagagttccatgacacaatggaaatggtttata
gaggatcatgctactcaaggcatgcagagaatttcttttcccctaggactgactctggaa
ctgtgtgagaaactgctggattctacagtgccaaataaacaactttcaactgaccaaaca
agagcttcttggtttatggatggcaattccaaggcacaaaatgctaggaagaactgttct
gtttctcagtaa

>gi568815585f:49911941_50113161|GENSCAN_predicted_peptide_3|236_aa
MFTSLAAPPQAHDSAPLVSAALPDWSSDGLRQPPQPTQIPADLGNSPPSLKVRGPPRFPE
RSRAAGTYLRPPASGKGRATARPPTTGTARTATGKLPLEKDDCPTKTCIHSYILPWKSTV
ELDPSTDSTGIVNILVTLKFPSTDLQAFGLALVLPEAHTASSSRAPAPLVPSLTRPSPAT
SHPHPPTIAQLTVSGRASKTDGSEVLHLRAALALRAGQGLSGPLTGPQDCPFPQHA

>gi568815585f:49911941_50113161|GENSCAN_predicted_CDS_3|711_bp
atgttcactagcttggccgctcctccccaggcccatgacagtgccccgctggtttctgcc
gcgctgccggactggagctcagacggccttcgccagcccccccaacccacgcagatccct
gctgacctgggcaactccccaccctcgctgaaggttcgaggaccaccccgctttcccgag
aggagccgggcggcgggtacttatctccgacctccggctagtgggaaaggccgcgcgacc
gcccgtcctccaactacagggaccgcacgaacagcgactgggaaactgccactagaaaaa
gatgactgtccaactaaaacctgcatacacagctacatccttccctggaagagcacagtg
gaactagatcctagtacagatagcacagggattgtcaacattcttgtcacactgaaattt
ccttctactgatctccaagcatttgggttagcccttgtgttacccgaggctcatactgct
tccagcagcagggctcctgcacccttagttccttccctaacgaggccctcaccagccacc
tcccatccccatcctccaaccatagcacaactgacagtctcaggtagggcctctaaaacc
gatggaagtgaagtgctacacctcagagctgctttagcccttagagctggccagggtctg
agtgggcctctcacagggccacaggactgccctttcccccagcatgcctag

>gi568815585f:49911941_50113161|GENSCAN_predicted_peptide_4|486_aa
MELLEEDLTCPICCSLFDDPRVLPCSHNFCKKCLEGILEGSVRNSLWRPAPFKCPTCRKE
TSATGINSLQVNYSLKGIVEKYNKIKISPKMPVCKGHLGQPLNIFCLTDMQLICGICATR
GEHTKHVFCSIEDAYAQERDAFESLFQSFETWRRGDALSRLDTLETSKRKSLQLLTKDSD
KVKEFFEKLQHTLDQKKNEILSDFETMKLAVMQAYDPEINKLNTILQEQRMAFNIAEAFK
DVSEPIVFLQQMQEFREKIKVIKETPLPPSNLPASPLMKNFDTSQWEDIKLVDVDKLSLP
QDTGTFISKIPWSFYKLFLLILLLGLVIVFGPTMFLEWSLFDDLATWKGCLSNFSSYLTK
TADFIEQSVFYWEQMTLLPLPPQRPSYHDLVFQCGSDSTTDNQTGVRYVSIKPDNRKLAN
GTNVLGLLIDTLLKEGFHLVSTRTVSSEDKTECYSFERIKSPEVLITNETPKPETIIIPE
QSQIKK

>gi568815585f:49911941_50113161|GENSCAN_predicted_CDS_4|1461_bp
atggagctgcttgaagaagatctcacatgccctatttgttgtagtctgtttgatgatcca
cgggttttgccttgctcccacaacttctgcaaaaaatgcttagaaggtatcttagaaggg
agtgtgcggaattccttgtggagaccagctccattcaagtgtcctacatgccgtaaggaa
acttcagctactggaattaatagcctgcaggttaattactccctgaagggtattgtggaa
aagtataacaagatcaagatctctcccaaaatgccagtatgcaaaggacacttggggcag
cctctcaacattttctgcctgactgatatgcagctgatttgtgggatctgtgctactcgt
ggggagcacaccaaacatgtcttctgttctattgaagatgcctatgctcaggaaagggat
gcctttgagtccctcttccagagctttgagacctggcgtcggggagatgctctttctcgc
ttggataccttggaaactagtaagaggaaatccctacagttactgactaaagattcagat
aaagtgaaggaattttttgagaagttacaacacacactggatcaaaagaagaatgaaatt
ctgtctgactttgagaccatgaaacttgctgttatgcaagcatatgacccagagatcaac
aaactcaacaccatcttgcaggagcaacggatggcctttaacattgctgaggctttcaaa
gatgtgtcagaacccattgtatttctgcaacagatgcaggagtttagagagaaaatcaaa
gtaatcaaggaaactcctttacctccctctaatttgcctgcaagccctttaatgaagaac
tttgataccagtcagtgggaagacataaaactagtcgatgtggataaactttctttgcct
caagacactggcacattcattagcaagattccctggagcttttataagttatttttgcta
atccttctgcttggccttgtcattgtctttggtcctaccatgttcctagaatggtcatta
tttgatgacctggcaacttggaaaggctgtctttcaaacttcagttcctatctgactaaa
acagccgatttcatagaacaatcagttttttactgggaacagatgaccttacttccactg
cctccacaaagaccttcttaccatgacctggttttccagtgtggttctgacagcactact
gataaccaaactggagtcaggtatgtttctataaaacctgataaccgaaaattggccaac
ggaacaaatgtcctcggcttactgattgacactttattaaaggaaggctttcatttggtc
agcactagaacagtatcttctgaagacaaaactgaatgctatagctttgaaaggataaaa
agccctgaagtgctcatcacgaatgaaacaccaaaaccagagactatcatcataccagag
caatctcagataaagaaatga

>gi568815585f:49911941_50113161|GENSCAN_predicted_peptide_5|114_aa
MPSPGWVFNADKYALFWKKMPQRTFISKEEKQAPGFKAGRDRQTLLFCANAVGLLPLAIK
LLIPEPQREKTPAASLLVVQQEETAKPTPFLPQPAQCENSEDEGLYDDPLPFNQ

>gi568815585f:49911941_50113161|GENSCAN_predicted_CDS_5|345_bp
atgcccagcccaggatgggtttttaatgctgataaatatgccctattctggaagaaaatg
ccacaaaggacatttattagtaaggaagaaaagcaagcaccaggatttaaggcaggaaga
gataggcaaactctactgttctgtgcaaatgcagtcggtttgctgcccttagccataaag
ctgctaatccctgagcctcaaagggaaaaaacaccagcagccagtcttttggttgtacaa
caagaagagacagcaaaaccaaccccttttcttcctcagcctgctcaatgtgaaaacagt
gaagatgaaggcctgtatgatgatccacttccatttaatcaatag

>gi568815585f:49911941_50113161|GENSCAN_predicted_peptide_6|317_aa
MTAITGSRKRREKAARFGNGGGARVQSSCQGAAACRDPAVRRPRLRSRAGGLADRSAGRR
LLRRSRHMRRIIVVHGSPFASSVAVLLLLAREKKNVLQPVSKLQTTECINETLYMDTRAF
KTALPACRAFAVLQRFTGVIALKPRNNFTRLVYVHSIQDWNPGQWTVLQVLTDAGMLTAT
KKKLYLQPSCGEEVIYELHQMAISVSFLDDLEDEASWPGKQNSCGCGDHVQEVPKLKVCA
LHMSSWACSQIPKAGDKILTFDQLTLDTLKGCGTILLSGPHKGQEVYWHFSKALGTQHSH
TKPCVHSRDQKFKHIRG

>gi568815585f:49911941_50113161|GENSCAN_predicted_CDS_6|954_bp
atgacggccatcaccgggtcgagaaaacggcgagaaaaggcggcccggttcggaaatggg
ggaggggcgcgcgtccagtcctcctgtcaaggagcggccgcctgcagagaccccgcagtg
cgccgtccccggctccggtcccgggcggggggtcttgctgacagatccgctgggcggcgg
ctgctccgccgcagccggcacatgcgcagaatcatcgtggtgcacggctctccctttgct
tcttcggttgcagtcctcttgcttcttgcgcgagaaaagaaaaacgtcttacagccagtg
tctaaactccaaacaacggaatgtatcaatgagaccttgtatatggatacacgtgcattt
aaaaccgccctgccggcttgtagagcttttgccgttctccagcgctttacaggggttatc
gcacttaagcctcggaacaactttaccaggcttgtttatgtgcattccatccaggattgg
aatcctggacaatggacagtgttgcaggtattgactgatgcaggcatgctgacagccaca
aaaaagaaactctaccttcaaccaagttgtggtgaagaggttatttatgagttgcaccaa
atggccatctctgtctctttcctggatgatctggaagatgaagcttcctggccaggaaaa
caaaacagctgtggttgtggggaccatgttcaggaggtgcccaaactgaaggtgtgtgca
ctgcacatgagcagttgggcctgcagccaaatccccaaggctggggacaagattctcacc
tttgaccagctgaccctggacaccctcaaaggctgtggcaccatcctgctctctgggcct
cacaagggccaagaagtgtactggcatttcagcaaggccctgggaacccagcatagccac
actaagccctgtgtccactccagggaccagaaattcaagcacatcagaggctga