GENSCAN 1.0	Date run:  5-Nov-116	Time: 08:24:49

Sequence gi568815583r:85668044_85869810 : 201767 bp : 45.55% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   1679   1787  109  1  1   90   79    11 0.450   0.26
 1.02 Intr +   8933   9055  123  0  0   80   92    77 0.975   7.86
 1.03 Intr +  14115  14169   55  1  1  105   64    53 0.988   2.64
 1.04 Intr +  16698  16830  133  0  1   64   87   109 0.989   9.05
 1.05 Intr +  25234  25408  175  0  1   97   71   275 0.809  26.21
 1.06 Intr +  39976  40043   68  2  2  114  116    21 0.531   6.12
 1.07 Intr +  42536  42602   67  1  1   68   94    39 0.508   0.98
 1.08 Intr +  47745  47880  136  1  1   79  106   113 0.987  11.83
 1.09 Intr +  49247  49359  113  2  2  102   90    84 0.999  10.02
 1.10 Intr +  49970  50116  147  0  0  -34   81   156 0.530   2.91
 1.11 Intr +  51033  51283  251  1  2  115   94   216 0.998  22.06
 1.12 Intr +  53948  54073  126  1  0  115   67   124 0.999  13.88
 1.13 Intr +  54187  54304  118  0  1  104  115   -46 0.983  -0.26
 1.14 Intr +  55029  55277  249  1  0   53  116   229 0.991  19.61
 1.15 Intr +  58367  58443   77  0  2   74   99    10 0.520  -0.07
 1.16 Intr +  59023  59204  182  0  2  112   95   140 0.997  15.77
 1.17 Intr +  59338  59420   83  1  2   41  100    83 0.798   4.08
 1.18 Intr +  62470  62664  195  2  0   82   53    91 0.887   4.39
 1.19 Intr +  66949  67107  159  2  0   68   94   103 0.686   8.86
 1.20 Intr +  67517  67587   71  0  2   43   63    42 0.940  -3.90
 1.21 Intr +  72179  72229   51  1  0   62   96    71 0.825   4.40
 1.22 Intr +  73003  73452  450  0  0   82   95   807 0.608  74.30
 1.23 Intr +  79651  79766  116  0  2   77  102    27 0.118   2.25
 1.24 Intr +  83259  83387  129  0  0  102   26    76 0.011   2.61
 1.25 Intr +  90414  90735  322  0  1   53  100   156 0.312   9.16
 1.26 Intr +  91443  91675  233  2  2   37   84    50 0.509  -3.93
 1.27 Intr +  91875  92061  187  0  1   63   48   134 0.460   6.59
 1.28 Intr +  92652  92748   97  2  1   62   87    61 0.847   2.98
 1.29 Intr +  93160  93286  127  2  1   19   81    96 0.799   1.74
 1.30 Intr +  95405  95507  103  2  1   72   37   124 0.712   5.88
 1.31 Term +  96100  96261  162  0  0   45   40   105 0.750  -0.66
 1.32 PlyA +  97817  97822    6                               1.05

 2.02 PlyA -  98903  98898    6                              -0.45
 2.01 Sngl - 101767  99998 1770  1  0   91   55  2994 0.999 291.02
 2.00 Prom - 108562 108523   40                              -7.26

 3.00 Prom + 114162 114201   40                              -4.66
 3.01 Init + 118276 118336   61  0  1   97   80     8 0.553   2.36
 3.02 Intr + 122623 122711   89  2  2  124   99    40 0.980   8.39
 3.03 Intr + 124234 124257   24  0  0  116   81     4 0.605   0.72
 3.04 Intr + 125460 125639  180  2  0   80    8   111 0.619   2.36
 3.05 Intr + 126829 126993  165  0  0   67   35   145 0.672   7.26
 3.06 Intr + 152287 152320   34  0  1   67   89    16 0.012  -2.60
 3.07 Intr + 164531 164671  141  0  0   10   94   171 0.079  10.22
 3.08 Intr + 166720 166822  103  2  1  103   84    62 0.150   6.53
 3.09 Intr + 170056 170087   32  1  2   90  115   -49 0.021  -4.23
 3.10 Intr + 172500 172568   69  1  0   99   80    41 0.269   3.55
 3.11 Intr + 188862 188903   42  1  0   75  103    62 0.326   4.61
 3.12 Term + 191820 191893   74  1  2   68   43    60 0.122  -2.43
 3.13 PlyA + 194327 194332    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term +  84160  84467  308  2  2  116   32   195 0.884  11.98


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815583r:85668044_85869810|GENSCAN_predicted_peptide_1|1537_aa
ICHRSKQQGFNYCTSAISSPLTKSISLMTISHPGLDTQQQMRPARRISISISPLLLKSKT
LFSLGSSYSSDEEEELHNSRPFHSTFHNTSANLTESITEENYNFLPHSPSKKDSEWKSGT
KVSRTFSYIKNKMSSSKKSKEKEKEKDKIKEKEKDSKDKEKDKKTVNGHTFSSIPVVGPI
SCSQCMKPFTNKDAYTCANCSAFVHKGCRESLASCAKVKMKQPKGSLQAHDTSSLPTVIM
RNKPSQPKERPRSAVLLVDETATTPIFANRRSQQSVSLSKSVSIQNITGVGNDENMSNTW
KFLSHSTDSLNKISKVNESTESLTDEGTDMNEGQLLGDFEIESKQLEAESWSRIIDSKFL
KQQKKDVVKRQEVIYELMQTEFHHVRTLKIMSGVYSQGMMADLLFEQQMVEKLFPCLDEL
ISIHSQFFQRILERKKESLVDKSEKNFLIKRIGDVLVNQFSGENAERLKKTYGKFCGQHN
QSVNYFKDLYAKDKRFQAFVKKKMSSSVVRRLGIPECILLVTQRITKYPVLFQRILQCTK
DNEVEQEDLAQSLSLVKDVIGAVDSKVASYEKKVRLNEIYTKTDSKSIMRMKSGQMFAKE
DLKRKKLVRDGSVFLKNAAGRLKEVQAVLLTDILVFLQEKDQKYIFASLDQKSTVISLKK
LIVREVAHEEKGLFLISMGMTDPEMVEVHASSKEERNSWIQIIQDTINTLNRDEDEGIPS
ENEEEKKMLDTRARELKEQLHQKDQKILLLLEEKEMIFRDMAECSTPLPEDCSPTHSPRV
LFRSNTEEALKGGPLMKSAINEVEILQGLVSGNLGGTLGPTVSSPIEQDVVGPVSLPRRA
ETFGGFDSHQMNASKGGEKEEGDDGQDLRRTESDSGLKKQVVQSVVHLYELLSALQGVVL
QQDSYIEDQKLVLSERALTRSLSRPSSLIEQEKQRSLEKQRQDLANLQKQQAQYLEEKRR
REREWEARERELREREALLAQREEEVQQGQQDLEKEREELQQKKGTYQYDLERLRAAQKQ
LEREQEQLRREAERLSQRQTERDLCQKMERVKNMQTATFNLCQYSLYPRESYLGGRILTK
VFLESSCSLESSETPLSLKFDSVSSGAQWQIIQRVLEQSSSSAVLPPLGRDEALCALGSS
TRTILTSETHPLKIIPFSKESGVMPLRQHQKHFLHCEGAIWILWASTPLSTTEATAESHR
AGAPPGSCSQQSHPARRLRHGMTFSGCPLSEGRLKAPECASRAVPWDHSQVPSGSWPDTG
GVCWVYRVQGAPCSQCPMAGVSVGKPCPKVPPPRGLQDPHQGMGDTRGCLSNCPGVREVL
VRDPSDSGGDSNEQMFSSSLGAILILELREQMGAKTQEDGEGPVTVLHTEMDAALSRTCQ
TGDLKALQVSFSPTPGSVLVAVHAPLGGDSGVNLIGFGDTQTPGDTLRILSAGRETQAAW
YLIRMARPPQVLVGALQQQDLRQTALENDRELDADAHTYEELQQGRPGMPGQRLLGCRPF
YGEPSSLPAFEENSDTELSRQKLDRRSFAEHGNNPGS

>gi568815583r:85668044_85869810|GENSCAN_predicted_CDS_1|4614_bp
atatgtcacagatctaagcagcagggatttaattactgtacatcagccatttcctctcca
ttgacaaaatccatctcattaatgacaatcagccatcctggattggacactcagcagcag
atgcggccagcaaggcggatctccatcagcatctctccgctcctccttaagtctaaaact
ctcttttctcttggctcttcttattcgagtgatgaggaggaggagttgcataattcacgg
cccttccacagtaccttccacaataccagtgctaatctgactgagagtataacagaagag
aactataatttcctgccacatagcccctccaagaaagattctgaatggaagagtggaaca
aaagtcagtcgtacattcagctacatcaagaataaaatgtctagcagcaagaagagcaaa
gaaaaggaaaaagaaaaagataagattaaggagaaggagaaagattctaaagacaaggag
aaagataagaagactgtcaacgggcacactttcagttccattcctgttgtgggtcccatc
agctgtagccagtgtatgaagcccttcaccaacaaagatgcctatacttgtgcaaattgc
agtgcttttgtccacaaaggctgccgagaaagtctagcctcctgtgcaaaggtcaaaatg
aagcagcccaaagggagccttcaggcacatgacacatcatcactgcccacggtcattatg
agaaacaagccctcacagcccaaggagcgtcctcggtccgcagtcctcctggtggatgaa
accgctaccaccccaatatttgccaatagacgatcccagcagagtgtctcgctctccaaa
agtgtctccatacagaacattactggagttggcaatgatgagaacatgtcaaacacctgg
aaattcctgtctcattcaacagactcactaaataaaatcagcaaggtcaatgagtcaaca
gaatcacttactgatgagggtacagacatgaatgaaggacaactactgggagactttgag
attgagtccaaacagctggaagcagagtcttggagtcggataatagacagcaagtttcta
aaacagcaaaagaaagatgtggtcaaacggcaagaagtaatatatgagttgatgcagaca
gagtttcatcatgtccgcactctcaagatcatgagtggtgtgtacagccaggggatgatg
gcggatctgctttttgagcagcagatggtagaaaagctgttcccctgtttggatgagctg
atcagtatccatagccaattcttccagaggattctggagcggaagaaggagtctctggtg
gataaaagtgaaaagaactttctcatcaagaggataggggatgtgcttgtaaatcagttt
tcaggtgagaatgcagaacgtttaaagaagacatatggcaagttttgtgggcaacataac
cagtctgtaaactacttcaaagacctttatgccaaggataagcgttttcaagcctttgta
aagaagaagatgagcagttcagttgttagaaggcttggaattccagagtgcatattgctt
gtaactcagcggattaccaagtacccagttttattccaaagaatattgcagtgtaccaaa
gacaatgaagtggagcaggaagatctagcacagtccttgagcctggtgaaggatgtgatt
ggagctgtagacagcaaagtggcaagttatgaaaagaaagtgcgtctcaatgagatttat
acaaagacagatagcaagtcaatcatgaggatgaagagtggtcagatgtttgccaaggaa
gatttgaaacggaagaagcttgtacgtgatgggagtgtgtttctgaagaatgcagcagga
aggttgaaagaggttcaagcagttcttctcactgacattttagttttccttcaagaaaaa
gaccagaagtacatctttgcatcattggaccagaagtcaacagtgatctctttaaagaag
ctgattgtgagagaagtggcacatgaggagaaaggtttattcctgatcagcatggggatg
acagatccagagatggtagaagtccatgccagctccaaagaggaacgaaacagctggatt
cagatcattcaggacacaatcaacaccctgaacagagatgaagatgaaggaattcctagt
gagaatgaggaagaaaagaaaatgttggacaccagagcccgagaattaaaagaacaactt
caccagaaggaccaaaaaatcctactcttgttggaagagaaggagatgattttccgggac
atggctgagtgcagcacccctctcccagaggattgctccccaacacatagccctagagtt
ctcttccgctccaacacagaagaggctctcaaaggaggacctttaatgaaaagtgcaata
aatgaggtggagatccttcagggtttggtgagtggaaatctgggaggcacacttgggccg
actgtcagcagccccattgagcaagatgtggtcggtcccgtttccctgccccggagagca
gagacctttggaggatttgacagccatcagatgaatgcttcaaaaggaggcgagaaggaa
gagggagatgatggccaagatcttaggagaacggaatcagatagtggcctaaaaaagcag
gttgtccagagcgttgttcatctctacgagctcctcagcgctctgcagggtgtggtgctg
cagcaggacagctacattgaggaccagaaactggtgctgagcgagagggcgctcactcgc
agcttgtcccgcccgagctccctcattgagcaggagaagcagcgcagcctggagaagcag
cgccaggacctggccaacctgcagaagcagcaggcccagtacctcgaggagaagcgcagg
cgcgagcgtgagtgggaagctcgtgagagggagctgcgggagcgggaggccctcctggcc
cagcgcgaggaggaggtgcagcaggggcagcaggacctggaaaaggagcgggaggagctc
cagcagaagaagggcacataccagtatgacctggagcgactgcgtgctgcccagaaacag
cttgagagggaacaggagcagctgcgccgggaggcagagcggctcagccagcggcagaca
gaacgggacctgtgtcagaaaatggagagggttaaaaacatgcaaactgccactttcaac
ctttgccagtattccctctacccccgtgagagctatctggggggaagaatccttaccaag
gtttttttggaaagttcctgttctttggagtcttcggagactcctttgtccttaaaattt
gactctgtttcttcaggggcacagtggcagatcatccagagggtcctggagcagtccagt
tccagcgccgtcctgccacccctggggagggacgaggccctctgtgctcttggctcttct
acacgcaccatactcacctctgagacacacccgctcaagatcattccattttctaaggaa
tctggcgtcatgcccctacgccagcatcagaagcacttcttacactgtgaaggcgctatt
tggattttgtgggccagcacaccactgagcaccacggaagccactgctgagagccaccgt
gctggggcacctccgggttcctgttcacagcagagccaccctgcacgcaggctgcgccac
ggcatgaccttctcgggctgcccgctgtctgaggggcgcctgaaggctcctgagtgtgcc
agcagagccgtcccctgggaccacagccaagtgccttcgggcagctggcctgacacaggc
ggggtctgctgggtctacagggtccaaggagccccatgcagccagtgccccatggcgggc
gtgtcagtgggcaaaccctgcccaaaggtcccacccccaagaggcctccaggacccgcac
caaggcatgggggacactcgtggctgcttaagtaactgcccaggtgtcagggaggtgctg
gtgagggaccccagtgactcaggaggtgacagcaatgaacaaatgttcagcagttctctc
ggggccattcttatcttggagctcagggagcaaatgggggccaaaacgcaagaggatggt
gagggtcccgtcactgtcctccacactgagatggatgcggccctgtccaggacctgccaa
acaggtgatctcaaggctctgcaagtgtccttctccccgacgccagggtcagtcctggtg
gcagtccatgcccctctgggaggtgactcaggtgtcaacttgattggattcggggatacc
cagacgcccggggacacattacgtattctcagtgctggaagggaaacccaggcggcttgg
tacttgattcgaatggccaggccgccccaagtcctagtgggcgccctccaacagcaggac
ctacgacaaacagctctggagaatgacagggaactcgatgcagacgctcacacctatgaa
gagctccaacagggaaggccaggcatgcccgggcagcggcttctgggctgcaggcccttc
tatggagagcccagctcactccctgcctttgaagagaactcggacactgagctgtccagg
cagaagctggacaggaggagctttgcagagcatgggaacaacccagggtcatag

>gi568815583r:85668044_85869810|GENSCAN_predicted_peptide_2|589_aa
MSVSVHETRKSRSSTGSMNVTLFHKASHPDCVLAHLNTLRKHCMFTDVTLWAGDRAFPCH
RAVLAASSRYFEAMFSHGLRESRDDTVNFQDNLHPEVLELLLDFAYSSRIAINEENAESL
LEAGDMLQFHDVRDAAAEFLEKNLFPSNCLGMMLLSDAHQCRRLYEFSWRMCLVHFETVR
QSEDFNSLSKDTLLDLISSDELETEDERVVFEAILQWVKHDLEPRKVHLPELLRSVRLAL
LPSDCLQEAVSSEALLMADERTKLIMDEALRCKTRILQNDGVVTSPCARPRKAGHTLLIL
GGQTFMCDKIYQVDHKAKEIIPKADLPSPRKEFSASAIGCKVYVTGGRGSENGVSKDVWV
YDTVHEEWSKAAPMLIARFGHGSAELENCLYVVGGHTSLAGVFPASPSVSLKQVEKYDPG
ANKWMMVAPLRDGVSNAAVVSAKLKLFVFGGTSIHRDMVSKVQCYDPSENRWTIKAECPQ
PWRYTAAAVLGSQIFIMGGDTEFTAASAYRFDCETNQWTRIGDMTAKRMSCHALASGNKL
YVVGGYFGTQRCKTLDCYDPTSDTWNCITTVPYSLIPTAFVSTWKHLPA

>gi568815583r:85668044_85869810|GENSCAN_predicted_CDS_2|1770_bp
atgtcggtcagtgtccatgagacccgcaagtcgcggagcagcacggggtccatgaacgtc
accctcttccacaaggcctcccacccggactgtgtgctggcccacctcaacacgcttcgc
aagcactgcatgttcaccgacgtcacactctgggcgggcgaccgtgccttcccctgtcac
cgtgccgtgctggccgcctctagccgctattttgaggccatgttcagccatggccttcgg
gagagccgggatgacactgtcaacttccaggacaacctgcacccggaggtgctggagctg
ctgctggactttgcctactcctcacgcatcgccatcaacgaggagaacgctgagtcactg
ctggaggcaggcgacatgctgcagttccacgatgtgcgggatgctgccgccgagttcctg
gagaagaaccttttcccctccaactgcctgggcatgatgctgctctcggacgcccaccag
tgccgccggctgtatgagttctcctggcgcatgtgcctggtgcactttgagacggtgagg
cagagcgaggacttcaacagcctgtccaaggacacactgctggacctcatctcgagtgat
gagctggagaccgaggacgagcgggtggtcttcgaggccatcctccagtgggtgaagcac
gacctggagccacggaaggtccacttgcccgagctcctccgcagcgtgcgtctggccttg
ctgccgtccgactgcctgcaggaggccgtctccagcgaggccctcctcatggcagacgag
cgcaccaagcttatcatggatgaggccctgcgctgcaagaccaggatcctgcagaatgat
ggcgtggtcaccagcccctgtgcccggccacgcaaggcgggccacacgctactcatcctg
gggggccagaccttcatgtgtgacaagatctaccaggtggaccacaaggccaaggagatc
atccccaaggccgacctgcccagcccccggaaggagttcagcgcctcagcgatcggctgc
aaggtctatgtgacggggggcaggggctccgagaacggggtctccaaggatgtctgggtg
tacgacaccgtacatgaggaatggtccaaggcggcgcccatgctgattgcccgctttggc
catggctcagctgagctggagaactgcctctatgtggtggggggacacacatccctggca
ggggtcttcccggcctcgccttctgtctccctgaaacaagtggagaaatacgaccctggg
gccaacaagtggatgatggtggcccccttgcgggatggcgtcagcaatgccgcagtggtg
agtgccaagctgaagctctttgttttcggaggaaccagcatccaccgggacatggtgtcc
aaggtccagtgctatgacccctcggagaacaggtggacgatcaaggccgagtgcccccag
ccttggcggtacacagccgctgccgtcctgggcagccagatcttcatcatgggaggtgac
acggaattcacagccgcctcggcctaccgctttgactgtgagaccaaccagtggacgcgg
attggggacatgactgccaagcgcatgtcctgccatgccctggcttccggcaacaagctc
tatgtggtcgggggctactttgggacccagaggtgtaagactctggactgctatgacccc
acttcagatacatggaactgcatcaccacagtgccctactcacttatccccacggccttt
gtcagcacctggaagcacctgcccgcgtga

>gi568815583r:85668044_85869810|GENSCAN_predicted_peptide_3|337_aa
MAKPGCCFLKGGESLAKTSPGSRSEGSSYGMVKRRSWPRALVTLKQEVAQLVPTKCFLTP
TQAFTNMPGILTAQISTLSISSSYEWGDWDPGSQRAWPHNGHWNLVQDTDRGILPPLLAK
TLSLRYSLGAANKLVSPAFPPRLPARRAAANQRHRLCDGWAAEPFSAAAEKKGGHVKWVD
LNVGGNKGTKSYLITTATTITTIIIRMEVMRWGFLALLFTACEELCAAARPGPTFMDENL
PEREFGIAQHLQPQGYSADALSSLIMPLGPGGWVCSESLPGQAAGADSRTVRFEELFSAV
RKLGTKKDTINPTWTCGAVADEDRSEDAGGSMLPFDL

>gi568815583r:85668044_85869810|GENSCAN_predicted_CDS_3|1014_bp
atggccaaacctggatgttgcttcctgaagggtggggagagcctggccaaaacgtcccca
ggttccaggtctgagggctctagctatgggatggtgaagagacggagttggcctcgggcc
ttggtcacgctgaaacaagaagtggcccagcttgttccaactaagtgtttcctgaccccc
acgcaagccttcaccaacatgccaggaatcctcacagctcagatcagcacactgagcatc
agttcctcctatgaatggggagactgggacccagggtcccagagggcttggccccataac
ggtcactggaatctggtccaggatacagaccgtggaatcctgcctcctctcctggcaaaa
acgctctcgctgcgatacagcctaggcgccgccaacaaactagtttctccggccttcccg
ccccgcctcccggcccgaagagcagcagccaatcagaggcatcgcctctgtgacggatgg
gcagccgaacccttcagtgcagccgcagaaaagaagggggggcatgtgaagtgggtggat
ttgaacgttggtggaaataaaggaactaagagttacctcatcaccactgccaccaccatc
accaccatcatcatcagaatggaggtgatgcggtggggcttcctggcgctgctcttcacg
gcttgtgaggagctctgtgcagcagctaggccaggccctaccttcatggatgaaaacctc
ccagagagggagttcggaatagcccaacacctacagcctcagggttattctgcagatgcc
ttgagcagcctcatcatgccgctgggcccaggaggctgggtctgttcagaatctctgccc
ggccaggcagcaggcgctgactctcgcactgtccggttcgaagagctgttttctgcagtt
aggaagctgggaaccaagaaagacaccatcaaccccacatggacctgcggggcagtggct
gatgaagacaggagtgaggatgctgggggcagcatgttgccctttgacctctga