GENSCAN 1.0	Date run:  7-Nov-116	Time: 15:13:56

Sequence gi568815586f:64510633_64794909 : 284277 bp : 43.38% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Sngl +   7724   7870  147  1  0   90   49   124 0.604   2.74
 1.02 PlyA +   9132   9137    6                               1.05

 2.04 PlyA -   9730   9725    6                               1.05
 2.03 Term -  17820  17732   89  1  2   64   48    94 0.671   0.82
 2.02 Intr -  24402  24254  149  2  2   16   44    99 0.027  -1.82
 2.01 Init -  32768  32380  389  2  2   80   23   221 0.463   9.21
 2.00 Prom -  34931  34892   40                              -3.26

 3.00 Prom +  35904  35943   40                              -4.76
 3.01 Init +  39041  39092   52  1  1   91   75    10 0.459   1.54
 3.02 Intr +  45929  46143  215  0  2   88  -34   157 0.058   1.93
 3.03 Term +  48344  48523  180  1  0   81   40   136 0.202   5.71
 3.04 PlyA +  50711  50716    6                               1.05

 4.00 Prom +  62169  62208   40                              -3.86
 4.01 Init +  72806  72808    3  1  0   98   53     0 0.320  -2.50
 4.02 Intr +  73957  74075  119  0  2  144   78    44 0.311   8.26
 4.03 Term +  85762  85921  160  1  1   52   36   105 0.346  -0.89
 4.04 PlyA +  88789  88794    6                               1.05

 5.00 Prom +  97446  97485   40                              -5.26
 5.01 Init + 100001 100111  111  1  0   89   89   175 0.960  17.91
 5.02 Intr + 122993 123136  144  1  0   50   24   102 0.108   0.48
 5.03 Term + 139586 139678   93  1  0   84   48    75 0.341   0.93
 5.04 PlyA + 140643 140648    6                               1.05

 6.00 Prom + 159351 159390   40                              -2.76
 6.01 Init + 163443 163475   33  2  0   60   89   101 0.761   5.28
 6.02 Intr + 174155 174262  108  1  0  126   99   128 0.999  18.18
 6.03 Intr + 177584 177821  238  1  1   90  107   161 0.981  15.39
 6.04 Intr + 180838 180947  110  2  2   86  107    82 0.999   9.90
 6.05 Term + 184131 184280  150  2  0   69   42   259 0.919  17.31
 6.06 PlyA + 185568 185573    6                               1.05

 7.13 PlyA - 185979 185974    6                               1.05
 7.12 Term - 196141 195937  205  0  1   65   48   100 0.499   0.54
 7.11 Intr - 209550 209390  161  0  2  117  114    42 0.973   8.49
 7.10 Intr - 211073 210963  111  2  0   52   94    95 0.852   7.08
 7.09 Intr - 212481 212374  108  0  0   63   65    46 0.544   0.28
 7.08 Intr - 218425 218324  102  1  0   59  111   122 0.449  11.97
 7.07 Intr - 226475 226372  104  0  2  105  100    94 0.966  12.19
 7.06 Intr - 228867 228749  119  2  2   80   71   162 0.976  13.81
 7.05 Intr - 230056 229974   83  1  2   79  116   -17 0.895  -1.36
 7.04 Intr - 232676 232509  168  2  0   23   22   216 0.962   8.64
 7.03 Intr - 234275 234177   99  2  0  110   97    50 0.997   8.41
 7.02 Intr - 235092 235027   66  0  0   92   97    11 0.670   1.50
 7.01 Init - 248644 248453  192  1  0   64   48   325 0.914  23.07
 7.00 Prom - 249487 249448   40                              -6.36

 8.00 Prom + 255812 255851   40                              -5.66
 8.01 Init + 256725 256830  106  2  1   69   99    33 0.494   2.89
 8.02 Intr + 257018 257112   95  0  2   63   47    84 0.322   1.48
 8.03 Intr + 260964 261048   85  2  1   65   24    82 0.250  -1.11
 8.04 Term + 263031 263428  398  1  2   77   49   172 0.276   7.44
 8.05 PlyA + 263885 263890    6                              -0.45

 9.00 Prom + 264497 264536   40                              -6.46
 9.01 Sngl + 270177 270824  648  2  0  105   32   867 0.994  76.98
 9.02 PlyA + 271688 271693    6                               1.05

10.00 Prom + 273560 273599   40                              -5.76
10.01 Init + 274703 274751   49  1  1   86   89    38 0.992   2.81
10.02 Intr + 275249 275413  165  0  0   63  100   198 0.635  18.43

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815586f:64510633_64794909|GENSCAN_predicted_peptide_1|48_aa
MVLTSAPVKARKLPVMVEGKEEDSVSHGKREQERQKEVPNSFKQPDLT

>gi568815586f:64510633_64794909|GENSCAN_predicted_CDS_1|147_bp
atggtgctgacatctgctcctgtgaaggccaggaagcttccagtcatggtggaaggcaaa
gaagaagacagtgtatcacacggcaagagggagcaagaaagacagaaggaagttccaaac
tcttttaaacaaccagatctcacatga

>gi568815586f:64510633_64794909|GENSCAN_predicted_peptide_2|208_aa
MAGCRSRALPRGEAAKARREIERSAGGPALLWDPKHPPQLLARVLSPSLPGRAAPAGHSK
CGARHSKCGARHSKCGARHSKCGARHSKCGARHSKCGARHSKCGARHSKCGARHSKCGAR
HSKCGARHSNMLKLTAFSLVVHKMTVYVTIDGALEMRKYGNAMPYYKASYSRNTTTYWCS
TPCMTFENPLNHSKRQLPELKLDEINVS

>gi568815586f:64510633_64794909|GENSCAN_predicted_CDS_2|627_bp
atggctggctgcaggtcccgagccctgccccgtggggaggcagctaaggcccggcgagaa
atcgagcgcagcgctggtgggccggcactgctgtgggacccaaagcaccctccgcagctg
ctagcccgggtgctaagcccctcactgcctgggcgggcggcgccggccggccactccaag
tgcggggcccgccactccaagtgcggggcccgccactccaagtgcggggcccgccactcc
aagtgcggggcccgccactccaagtgcggggcccgccactccaagtgcggggcccgccac
tccaagtgcggggcccgccactccaagtgcggggcccgccactccaagtgcggggcccgc
cactccaagtgcggggcccgccactccaacatgctgaaattgacagcattttccttagtg
gtacataaaatgacggtgtacgtcacaatagatggtgccttagagatgaggaaatatggt
aatgctatgccttactacaaggcaagctattctagaaatacaactacttactggtgttca
actccctgcatgacctttgaaaatccacttaaccactctaagcgtcagttgccggaactg
aagttggatgagatcaatgtttcctga

>gi568815586f:64510633_64794909|GENSCAN_predicted_peptide_3|148_aa
MAASSQHSLSLLSPISGGWGQPVGSVVFKKMGPGVCSRGHQSVMLATAEELSSGDSQLPQ
FTPVSQIYFSVQTGEQLLFSSRGESPIAALPSGPALWLQPDLASHTGDCGCLAPDTLEPH
IPMDINESSSATVTSAIGADLRRRATTA

>gi568815586f:64510633_64794909|GENSCAN_predicted_CDS_3|447_bp
atggcggccagcagccagcacagcctctctctcctgagccccataagcggaggctggggg
cagcctgtaggaagtgtggtcttcaagaaaatgggtccaggggtctgcagccggggccat
cagtcagttatgctcgccacagcagaagagctgagcagtggggactcacagctgccacag
ttcacccctgtatcccagatctacttttccgtgcagactggggagcagctcctcttctct
tcccgaggggaaagccctatagctgcactcccttcaggtccagccctctggctgcagcct
gaccttgctagtcatactggtgattgtggctgcctggctcctgacactctggagcctcat
attcccatggatattaatgagtccagctctgctactgtcacttctgccatcggcgctgac
ctgcggaggagggccaccactgcttag

>gi568815586f:64510633_64794909|GENSCAN_predicted_peptide_4|93_aa
MISYIFMTVSFPMNSKGNARKQIHSAKVSKKDITVTLGRWRKPEIAKFVKKRGLFGSQFC
RLYKHGTSDVQGFGVKFPSAQQVLILCTACVPR

>gi568815586f:64510633_64794909|GENSCAN_predicted_CDS_4|282_bp
atgatatcctacatcttcatgactgtgtcctttcctatgaattccaaaggaaatgcacgc
aaacaaatacattcagccaaagtgtctaagaaagacataacggtcacccttgggaggtgg
aggaaacccgaaattgcaaaatttgtgaagaaaagaggtttatttggctcacagttctgc
aggctgtacaagcatggcaccagtgatgttcaaggatttggagttaaatttcccagtgcc
caacaagtgctcatcctgtgcactgcatgtgtccctcgctaa

>gi568815586f:64510633_64794909|GENSCAN_predicted_peptide_5|115_aa
MSSGYSSLEEDAEDFFFTARTSFFRRAPQGKPRSGQQPQILFYSNEEKTNTENWYQERGI
AIKIPENVELALALGNRQRLEEFGGMSLANLINKFDYLHAKEEAVPQGKPEAALP

>gi568815586f:64510633_64794909|GENSCAN_predicted_CDS_5|348_bp
atgagcagcggctacagcagcctggaggaggacgccgaggacttcttcttcaccgccagg
acctccttcttcaggagagcgccccagggcaagccccgctccggccaacaacctcagata
ctcttttatagcaatgaagaaaagacaaacacagaaaattggtaccaggagaggggcatc
gcaataaagatacctgaaaatgtggaactggctttggcactgggtaataggcagagatta
gaagagtttggagggatgtcattggccaatttgataaacaaattcgattatctccatgcc
aaagaggaagcagtgcctcaaggcaagcctgaagcagcgctgccatga

>gi568815586f:64510633_64794909|GENSCAN_predicted_peptide_6|212_aa
MLGLFLLSLPQDVEKEKETHSYLSKEEIKEKVHKYNLAVTDKLKMTLNSNGIYTGFIKVQ
MELCKPPQTSPNSGKLSPSSNGCMNTLHISSTNTVGEVIEALLKKFLVTESPAKFALYKR
CHREDQVYACKLSDREHPLYLRLVAGPRTDTLSFVLREHEIGEWEAFSLPELQNFLRILD
KEEDEQLQNLKRRYTAYRQKLEEALREVWKPD

>gi568815586f:64510633_64794909|GENSCAN_predicted_CDS_6|639_bp
atgctgggcctgttcctgctttcgctgccccaggatgttgagaaagagaaggaaacccac
agttacctcagcaaagaggagatcaaagagaaagttcataaatacaacttagcagtcaca
gacaagttgaagatgaccttgaattcaaatgggatttacactggcttcattaaagtacag
atggaactctgcaaacctccacagacttctccaaattctggaaaactctctcccagtagc
aatggctgtatgaatacacttcatatcagcagcacaaacactgtcggggaagtgatcgag
gccctgctcaaaaagtttctcgtgactgagagccctgccaagtttgcactttataagcgt
tgtcacagggaagaccaagtctacgcctgcaagctctcagaccgggaacatccactctac
ctgcgtttggtagcagggcccagaacagacacacttagttttgttcttcgtgaacatgaa
attggagagtgggaagccttcagccttccagaactacagaatttcttgcgcatcttggac
aaggaagaagatgaacagctgcagaacctgaagaggcgctacacagcctacaggcagaag
ctggaagaagccctccgtgaggtgtggaagcctgattaa

>gi568815586f:64510633_64794909|GENSCAN_predicted_peptide_7|505_aa
MRLLPLAPGRLRRGSPRHLPSCSPALLLLVLGGCLGVFGVAAGTRRPNVVLLLTDDQDEV
LGGMYGAPDAGGLEHVPLGWSYWYALEKNSKYYNYTLSINGKARKHGENYSVDYLTDVLA
NVSLDFLDYKSNFEPFFMMIATPAPHSPWTAAPQYQKAFQNVFAPRNKNFNIHGTNKHWL
IRQAKTPMTNSSIQFLDNAFRKRWQTLLSVDDLVEKLVKRLEFTGELNNTYIFYTSDNGY
HTGQFSLPIDKRQLYEFDIKVPLLVRGPGIKPNQTSKMLVANIDLGPTILDIAGYDLNKT
QMDGMSLLPILRGASNLTWRSDVLVEYQGEGRNVTDPTCPSLSPGVSQCFPDCVCEDAYN
NTYACVRTMSALWNLQYCEFDDQEVFVEVYNLTADPDQITNIAKTIDPELLGKMNYRLMM
LQSCSGPTCRTPGVFDPGSLVQVTIHFVIYQGRLQPKAQCPSMLPQRMKPMMPRLVLCTA
GDNNTLACNHPGPSPSSCNANEGPV

>gi568815586f:64510633_64794909|GENSCAN_predicted_CDS_7|1518_bp
atgcggctcctgcctctagccccaggtcggctccggcggggcagcccccgccacctgccc
tcctgcagcccagcgctgctactgctggtgctgggcggctgcctgggggtcttcggggtg
gctgcgggaacccggaggcccaacgtggtgctgctcctcacggacgaccaggacgaagtg
ctcggcggcatgtacggagccccagatgcaggtggactagaacacgttcctctgggttgg
agttactggtatgccttggaaaagaattctaagtattataattacaccctgtctatcaat
gggaaggcacggaagcatggtgaaaactatagtgtggactacctgacagatgttttggct
aatgtctccttggactttctggactacaagtccaactttgagcccttcttcatgatgatc
gccactccagcgcctcattcgccttggacagctgcacctcagtaccagaaggctttccag
aatgtctttgcaccaagaaacaagaacttcaacatccatggaacgaacaagcactggtta
attaggcaagccaagactccaatgactaattcttcaatacagtttttagataatgcattt
aggaaaaggtggcaaactctcctctcagttgatgaccttgtggagaaactggtcaagagg
ctggagttcactggggagctcaacaacacttacatcttctatacctcagacaatggctat
cacacaggacagttttccttgccaatagacaagagacagctgtatgagtttgatatcaaa
gttccactgttggttcgaggacctgggatcaaaccaaatcagacaagcaagatgctggtt
gccaacattgacttgggtcctactattttggacattgctggctacgacctaaataagaca
cagatggatgggatgtccttattgcccattttgagaggtgccagtaacttgacctggcga
tcagatgtcctggtggaataccaaggagaaggccgtaacgtcactgacccaacatgccct
tccctgagtcctggcgtatctcaatgcttcccagactgtgtatgtgaagatgcttataac
aatacctatgcctgtgtgaggacaatgtcagcattgtggaatttgcagtattgcgagttt
gatgaccaggaggtgtttgtagaagtctataatctgactgcagacccagaccagatcact
aacattgctaaaaccatagacccagagcttttaggaaagatgaactatcggttaatgatg
ttacagtcctgttctgggccaacctgtcgcactccaggggtttttgaccccggcagtctg
gtgcaagtgactattcactttgtcatctatcagggcaggcttcagcctaaagctcaatgc
ccatcaatgctcccacagaggatgaagcccatgatgccacgtctggtcctctgcacagca
ggggataacaacactctggcctgcaatcatcctggcccctctccttcttcctgtaatgcc
aacgaaggtcctgtttaa

>gi568815586f:64510633_64794909|GENSCAN_predicted_peptide_8|227_aa
MGNDHSLPQAQPSISPDAVAMLDLIPLLDKINMTTALTNPDCPGILQNILPIQYIDDIML
IRQDEKELTSKGLYDQLKEEEKAPTWFIDKTAWFIAFTGDTSRYWKTQGDWDQAASKPQQ
PYRKVIKLLKQKQKPSKGQQPQRLKIDNPIKMRKNQHKNAENSKRQNALFPPNDCITSPA
RVWNQAKAVMAEMTEVEFRIWIGTNFTELKEDIVTQWKEAKNHDKTS

>gi568815586f:64510633_64794909|GENSCAN_predicted_CDS_8|684_bp
atgggaaatgatcatagcctaccacaagctcaaccaagtattagtcctgacgctgtggcc
atgctggatttgatacctttgctagacaaaatcaatatgactacagccctgacaaatcca
gactgcccaggtatcctgcagaacatcttacccatccaatacattgatgacatcatgctg
atcaggcaggatgaaaaagagctcacgtccaagggcctgtatgaccagctgaaggaggag
gaaaaagccccaacttggtttatagacaaaacagcatggtttatagccttcactggtgat
acttccaggtactggaaaacccaaggtgactgggaccaggctgccagcaaaccacagcag
ccctacagaaaagtgatcaagctgttaaaacaaaaacaaaaaccatccaaaggtcagcaa
cctcaaagattgaaaatagataatcccataaagatgagaaagaatcagcacaagaatgct
gaaaactcaaaaaggcaaaatgccctctttcctccaaatgactgcatcacctctccagca
agggtttggaaccaggccaaggctgtgatggctgaaatgacagaagtagaattcagaata
tggataggaacaaacttcactgaattaaaggaggatattgtaacccaatggaaggaagct
aaaaatcatgataaaacatcatag

>gi568815586f:64510633_64794909|GENSCAN_predicted_peptide_9|215_aa
MDVLPTGGGRPGLRTELEFRGGGGEARLESQEEETIPAAPPAPRLRGAAERPRRSRDTWD
GDEDTEPGEACGGRTSRTASLVSGLLNELYSCTEEEEAAGGGRGAEGRRRRRDSLDSSTE
ASGSDVVLGGRSGAGDSRVLQELQERPSQRHQMLYLRQKGEGRAQQGPGGFLEPGCPRRL
CPRSSAHLGCSAERSDTVSLDLTVVPTVAQIYVHT

>gi568815586f:64510633_64794909|GENSCAN_predicted_CDS_9|648_bp
atggacgtccttcccaccggcgggggccgcccggggctccggacggagctggaattccgc
ggcggcggtggcgaggcgaggctggagagtcaggaggaagaaacgattcctgcagctccc
ccagccccgcgcctccggggagcggcggagcggccgcggcgctcccgggacacgtgggac
ggcgatgaggacacggagcccggcgaggcgtgcggcggccgcacaagccgcacggcgtcc
ctggtgagcgggctgctcaacgagctgtacagctgcacagaggaggaggaggcggcgggc
gggggccgcggggccgagggccgccggcggcgccgcgacagcctcgacagctccaccgag
gcctcgggctccgacgtggtcctgggcggccgcagcggtgccggcgactcccgcgtgctg
caggagctgcaggagcgaccgagccagcggcatcagatgctgtacctgcggcagaaaggt
gagggccgggcgcagcagggtcccgggggcttcctggagccgggttgtcctcgccgtctc
tgcccgcgctccagcgcgcacctgggctgctcggcggagcgctcagatactgtctctttg
gatctgacggtggtacccaccgtggcacagatttatgtccacacttag

>gi568815586f:64510633_64794909|GENSCAN_predicted_peptide_10|72_aa
MGFLHVGQAGLQLLTSDANELKTILRELKYRIGIQSAKLLRHLKQKDRLLHKVQRNCDIV
TACLQAVSQKRX

>gi568815586f:64510633_64794909|GENSCAN_predicted_CDS_10|216_bp
atggggtttctccatgttggtcaggctggtctccaactcctgacctcagacgctaatgaa
ctgaagacgatccttcgagagctaaagtacagaattggcatccagtcggccaagttactt
cggcatctgaagcagaaagataggcttctgcataaagtgcagaggaactgtgatattgtg
actgcctgcttgcaggctgtgtcacagaagagaann