GENSCAN 1.0	Date run:  5-Nov-116	Time: 08:20:04

Sequence gi568815578f:16631703_16841002 : 209300 bp : 40.59% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.03 PlyA -    626    621    6                               1.05
 1.02 Term -   7045   6878  168  1  0   19   54   152 0.600   1.80
 1.01 Init -   7295   7164  132  2  0   56   51   151 0.830   8.33
 1.00 Prom -  12154  12115   40                              -2.25

 2.00 Prom +  14430  14469   40                              -9.25
 2.01 Sngl +  16146  16433  288  2  0   69   39   217 0.847  10.24
 2.02 PlyA +  17233  17238    6                               1.05

 3.03 PlyA -  17421  17416    6                               1.05
 3.02 Term -  22878  22868   11  1  2  121   48     6 0.243  -2.72
 3.01 Init -  27407  26978  430  2  1   70   81   238 0.943  17.77
 3.00 Prom -  31001  30962   40                             -10.35

 4.02 PlyA -  31352  31347    6                               1.05
 4.01 Sngl -  32031  31651  381  0  0   68   40   216 0.584  10.73
 4.00 Prom -  36804  36765   40                              -5.55

 5.06 PlyA -  36840  36835    6                              -0.45
 5.05 Term -  38250  37927  324  0  0   79   40   227 0.678  10.78
 5.04 Intr -  49705  49629   77  2  2   64   92     9 0.121  -2.78
 5.03 Intr -  52678  52435  244  1  1   36   54   190 0.008   6.55
 5.02 Intr -  63475  63399   77  2  2   63   63    71 0.008   0.42
 5.01 Init -  69801  69633  169  0  1   98   13   140 0.346   7.24
 5.00 Prom -  70966  70927   40                              -6.25

 6.03 PlyA -  71705  71700    6                               1.05
 6.02 Term -  74397  74308   90  0  0   97   37    79 0.096   0.44
 6.01 Init -  83005  82934   72  1  0   80   31   126 0.152   7.22
 6.00 Prom -  88301  88262   40                              -2.85

 7.00 Prom +  88718  88757   40                              -7.65
 7.01 Init +  91296  91352   57  2  0   86   55    35 0.373   1.43
 7.02 Intr +  91768  91807   40  0  1   55  116    30 0.279  -0.62
 7.03 Intr +  98183  98307  125  0  2  110    8   168 0.838  10.38
 7.04 Intr +  98435  98512   78  1  0  114   60    48 0.573   3.43
 7.05 Intr +  98830  98953  124  0  1   75   13    98 0.483   0.24
 7.06 Intr +  99966 100064   99  1  0   93  115    54 0.931   7.76
 7.07 Intr + 100462 100634  173  2  2   59  103    66 0.971   3.94
 7.08 Intr + 105559 105699  141  0  0   11  110   141 0.957   8.23
 7.09 Intr + 108623 108711   89  1  2   90   89    42 0.997   2.35
 7.10 Term + 109144 109303  160  1  1  110   38   117 0.994   5.33
 7.11 PlyA + 109492 109497    6                               1.05

 8.00 Prom + 115302 115341   40                              -5.85
 8.01 Init + 116700 116814  115  2  1   75   56    83 0.868   4.22
 8.02 Intr + 117165 117304  140  1  2  108   47   109 0.851   8.06
 8.03 Intr + 118201 118308  108  0  0   49  115   125 0.987  10.86
 8.04 Intr + 130467 130558   92  2  2   -2   72   120 0.164  -0.73
 8.05 Intr + 132620 132700   81  2  0   78   52   117 0.503   4.93
 8.06 Term + 133012 133108   97  1  1   87   52   123 0.951   5.06
 8.07 PlyA + 133336 133341    6                               1.05

 9.03 PlyA - 133659 133654    6                               1.05
 9.02 Term - 136721 136532  190  1  1   91   49   175 0.928   9.84
 9.01 Init - 158954 158725  230  2  2   61   72   107 0.082   4.29
 9.00 Prom - 159838 159799   40                              -6.15

10.06 PlyA - 160114 160109    6                               1.05
10.05 Term - 160910 160465  446  0  2  -46   55   237 0.050   1.41
10.04 Intr - 161456 161274  183  0  0   15   71   105 0.023   0.34
10.03 Intr - 168786 168487  300  1  0   17   84   134 0.163   1.68
10.02 Intr - 172081 171946  136  1  1  102   66    81 0.700   6.52
10.01 Init - 175917 175669  249  0  0   83   41   184 0.763  10.71
10.00 Prom - 177840 177801   40                              -5.55

11.05 PlyA - 178901 178896    6                               1.05
11.04 Term - 181989 181903   87  0  0   71   42   150 0.405   5.38
11.03 Intr - 182264 182165  100  1  1   79   88   -14 0.496  -3.11
11.02 Intr - 184697 184671   27  1  0  118   83    13 0.463   0.11
11.01 Init - 185263 184917  347  1  2  104   46   224 0.904  16.53
11.00 Prom - 187300 187261   40                              -8.65

12.00 Prom + 189245 189284   40                              -6.45
12.01 Init + 190227 190317   91  2  1   83  103   118 0.862  13.50
12.02 Intr + 191399 191552  154  0  1   25   62   121 0.053   1.41
12.03 Term + 205509 205746  238  0  1    8   50   150 0.004  -2.14
12.04 PlyA + 207046 207051    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term + 119393 119416   24  1  0  111   38    26 0.805  -2.85
S.002 Term + 191399 191595  197  0  2   25   36   129 0.866  -2.01


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815578f:16631703_16841002|GENSCAN_predicted_peptide_1|99_aa
MSRRLRILQGLCSCRASTGLWAVLLVTLPRCMKPAEPGAMTPVTGHSEMADTYLDITNNH
SSHSSHAYDAAVVANVPTASLSSELSLRDDFGLLQGDAQ

>gi568815578f:16631703_16841002|GENSCAN_predicted_CDS_1|300_bp
atgtcacgacgactgcgtatcctgcaaggcctttgttcctgcagggccagcacgggactc
tgggcagtgctgctggtcactctccccaggtgcatgaagccggcagagcctggagccatg
actccagtcacaggtcactctgagatggcagacacatacctggacatcactaacaatcac
agctctcattcaagccatgcctatgatgctgcagttgttgccaatgtccctacagcttca
ctgagctctgagcttagtctgagagatgactttggcctcctccagggagatgctcagtga

>gi568815578f:16631703_16841002|GENSCAN_predicted_peptide_2|95_aa
MSLKRQNYSGNLVSVSPRNMGSSSTYLLVTFWNDSQATNASLFANDRDLISGDDRIDVAA
AVPLDLEDALFSLLSPGNIAPDAAVNINDPHSCNL

>gi568815578f:16631703_16841002|GENSCAN_predicted_CDS_2|288_bp
atgtccctgaaaaggcaaaactattcagggaacctggtgagtgtcagcccgagaaatatg
ggcagctcatctacatatcttttagtgaccttctggaatgacagccaagccaccaacgct
tccctgtttgcaaatgatagagatctcatttctggggacgacaggattgatgtggcagcc
gcagtgccattagacctggaagatgctcttttctcattactgtctcctggcaacatagca
ccagatgccgccgtgaatattaatgatcctcattcatgtaacctttag

>gi568815578f:16631703_16841002|GENSCAN_predicted_peptide_3|146_aa
MDKFPDTYAPPRLNQEEAESLNRPRTSFEIEAVRNSLPTKKSPGPDGFTAESYYRYKEEL
TPFLLKLFQTIEKQGLLPDSFYESSIILIQKTGRDTTKKENFRPISLININAKILNKILA
NQIQQHIKKLIHHDQVSFIQGMQGFS

>gi568815578f:16631703_16841002|GENSCAN_predicted_CDS_3|441_bp
atggataaattcccggacacatatgcccccccaagactgaaccaggaagaagctgaatcc
ctgaatagaccaagaacaagttttgaaattgaggcagtgagaaatagcctaccaaccaaa
aaaagcccagggccagatggatttacagctgaatcctactacaggtacaaagaggagctg
acaccctttcttctgaaattattccaaacaattgaaaagcagggactcctccctgactca
ttctatgagtccagcatcatcctgatacaaaaaactggcagagatacaacaaaaaaagaa
aacttcaggccaatatccctgataaacatcaatgcaaaaattctcaataaaatactggca
aaccaaatacagcagcacatcaaaaaacttatccaccatgatcaagtcagcttcatccag
gggatgcaaggtttctcctga

>gi568815578f:16631703_16841002|GENSCAN_predicted_peptide_4|126_aa
MWHMLRVQGHLPTGGEDWDSYLVCWPRQQIQPPAPGSERVQNIPPQNMPLWRINYSELKE
LEKQQMQKGLSDLTPSFDVKASHKVSHKKGAFSVPGRKEHSYHQRLGVNGKWICTNEPTK
ITLIVH

>gi568815578f:16631703_16841002|GENSCAN_predicted_CDS_4|381_bp
atgtggcacatgctacgggtgcagggccacctccccacgggaggagaggactgggattct
tatttggtttgttggccaagacaacaaatccaaccacctgctcctggtagtgaaagagtt
cagaacataccaccccaaaatatgccactttggcgtattaattattctgagctaaaggaa
cttgagaaacagcagatgcagaaagggctttctgatctcactccctcttttgatgtaaaa
gcaagtcataaagtttcccataagaaaggtgccttctctgtaccaggaagaaaagagcat
tcttatcaccagagattgggagtcaatggcaaatggatctgtacaaatgaacctactaaa
ataacccttattgtccattaa

>gi568815578f:16631703_16841002|GENSCAN_predicted_peptide_5|296_aa
MWHDGLPTGSTRTQLLDVMITLNPERLQDQPEGQESNGRGKTTRPALSAERCGHNQDSKN
GSRRLKEDASASTNFMAGNTLKTRVPYGINKRKARMGRLIHKMTCAFVTFMQVNLEDKGV
LAKLVEATKTNYNNKYDEIHHHGGSNVPGPKSMAHIAKLEMAKVLESESPRSRCQQSWFH
SEASLCGLQIHLEARPGLVTELQPGNNFNGIYYNMNPGQTLLWNNLYPQEACPLPSYASL
FPDAATGVIFHQTGSSTSTFSLESSQHGTHGLFVKAVEVKTFSEPVNGTVILPALT

>gi568815578f:16631703_16841002|GENSCAN_predicted_CDS_5|891_bp
atgtggcatgatggtctacccacaggtagcaccaggacccaactgctggatgtgatgata
acacttaatccagagaggctacaagaccaacctgaaggccaagagtccaatggaagaggc
aaaaccactaggcctgccctaagtgcagaaagatgtggtcacaaccaggacagtaagaat
gggtcaagaagactcaaggaagatgcttctgcttctaccaacttcatggcaggcaataca
ctcaagacaagggtcccttacggcattaacaaaaggaaggcaagaatgggacgtctgatc
cacaagatgacctgcgcctttgtcaccttcatgcaggttaacttagaagacaaaggagtt
ttggctaagctggtggaagctaccaagaccaattacaacaacaaatatgatgagatccat
catcacgggggaagcaatgtcccaggcccaaaatccatggctcacattgccaagctggaa
atggcaaaggttctggagtctgagagtccaagatcaaggtgtcagcagagttggtttcat
tcagaggcctctctctgtggcttgcagatacaccttgaagcacgtccaggtctagtcact
gagctccagccaggaaataatttcaatgggatctattataacatgaacccaggccagacg
ctcctgtggaataacctctacccacaggaagcatgccctctaccgtcttatgcttctctg
tttcctgatgcagccactggagtcatcttccaccaaacaggaagctccacttccactttc
agccttgaatcttctcagcatgggacacatggcctctttgtcaaagctgtggaggttaag
accttcagtgaaccagtaaatggtacagtcattctaccagctttgacatag

>gi568815578f:16631703_16841002|GENSCAN_predicted_peptide_6|53_aa
MDVWPAAPIRSARYGACSAHAGVQAQHHVEAAKVWGLHPLKPWPTLYVGPFQP

>gi568815578f:16631703_16841002|GENSCAN_predicted_CDS_6|162_bp
atggacgtgtggccagctgctcccatccgatcagctcgttatggagcatgctctgctcat
gcaggagtacaggctcaacaccatgtggaagctgccaaggtttggggcttgcatcctctg
aagccatggcccacgctctatgttggcccctttcagccatag

>gi568815578f:16631703_16841002|GENSCAN_predicted_peptide_7|361_aa
MKLPPNVLGMLGLGEPGTYVPNKGKTLKVPNKGQTHAQRDCQPWLPETRKHRSALCSASR
LVGARLRSVATLLPLGADEARSWGGYAFGPGLDLGGAGLGSLPFRRLLCDPCPFSRFRFR
GSQGFEKRYVLPVTCTSAAPAYFLLSPEEFNTNMDIRPNHTIYINNMNDKIKKEELKRSL
YALFSQFGHVVDIVALKTMKMRGQAFVIFKELGSSTNALRQLQGFPFYGKPMRIQYAKTD
SDIISKMRGTFADKEKKKEKKKAKTVEQTATTTNKKPGQVPDYPPNYILFLNNLPEETNE
MMLSMLFNQFPGFKEVRLVPGRHDIAFVEFENDGQAGAARDALQGFKITPSHAMKITYAK
K

>gi568815578f:16631703_16841002|GENSCAN_predicted_CDS_7|1086_bp
atgaagctcccacctaatgttcttggaatgcttggtctgggggaacctggcacctatgtg
cccaataaaggtaaaacactaaaggtgcccaataaagggcagacgcacgcgcagagagat
tgccagccctggctgccagagacccggaagcatcgatcggctctgtgctcggcttctaga
cttgtcggcgctcgattgaggagcgtggctacgttgcttccgctgggagcggacgaagcg
cgaagctggggtgggtacgcgtttggcccgggtttggatctcggaggggcaggcttgggg
tcacttccctttcgtcgtctcctttgcgacccctgccccttctccagatttcgatttagg
gggtcgcaaggctttgagaagcgttacgttttacctgttacctgcacaagtgcagcccct
gcttattttttactgtctcctgaagaatttaacacaaacatggatatcagaccaaatcat
acaatttatatcaacaatatgaatgacaaaattaaaaaggaagaattgaagagatcccta
tatgccctgttttctcagtttggtcatgtggtggacattgtggctttaaagaccatgaag
atgagggggcaggcctttgtcatatttaaggaactgggctcatccacaaatgccttgaga
cagctacaaggatttccattttatggtaaaccaatgcgaatacagtatgcaaaaacagat
tcggatataatatcaaaaatgcgtggaacttttgctgacaaagaaaagaaaaaagaaaag
aaaaaagccaaaactgtggaacagactgcaacaaccacaaacaaaaagcctggccaggtc
cctgattaccctccaaactatattttattccttaataacttaccagaagagactaatgag
atgatgttatccatgctgtttaatcagttccctggcttcaaggaagtacgtctggtacca
gggaggcatgacattgcttttgttgaatttgaaaatgatgggcaggctggagctgccagg
gatgctttacagggatttaagatcacaccgtcccatgctatgaagatcacctatgccaag
aaataa

>gi568815578f:16631703_16841002|GENSCAN_predicted_peptide_8|210_aa
MARILLLFLPGLVAVCAVHGIFMDRLASKKLCADDECVYTISLASAQEDYNAPDCRFINV
KKGQQIYVYSKLVKENGAGEFWAGSVYGDGQDEMGVVGYFPRNLVKEQRVYQEATKEVPT
TWVKAKDVAKQPTSTIQLLTKNNQDPNDNVPRQILSEAAESMEHGKHLGRTPGTQKHRSD
PVSPSAMSGSSPRLSPDADTRPGTFQSPES

>gi568815578f:16631703_16841002|GENSCAN_predicted_CDS_8|633_bp
atggcaagaatattgttacttttcctcccgggtcttgtggctgtatgtgctgtgcatgga
atatttatggaccgtctagcttccaagaagctctgtgcagatgatgagtgtgtctatact
atttctctggctagtgctcaagaagattataatgccccggactgtagattcattaacgtt
aaaaaagggcagcagatctatgtgtactcaaagctggtaaaagaaaatggagctggagaa
ttttgggctggcagtgtttatggtgatggccaggacgagatgggagtcgtgggttatttc
cccaggaacttggtcaaggaacagcgtgtgtaccaggaagctaccaaggaagttcccacc
acgtgggtaaaggccaaggatgttgctaaacaacctacaagcacaatacagctcctcaca
aagaataatcaggacccaaacgacaatgtgccaaggcagatcctgtccgaagctgctgaa
agcatggagcatgggaagcacctgggaagaacacctggcactcaaaagcacaggagtgac
cccgtttcaccttctgccatgagcggaagcagccctaggctctcaccagatgcagacacc
cgacctggaactttccagtcaccagaatcatga

>gi568815578f:16631703_16841002|GENSCAN_predicted_peptide_9|139_aa
MPTTIREYYKHLYTNKLGNLEEMDKSLDTYTLPRLNQEEVESLNRPITGSEIEAMINSLP
TKKSPGPDGFTAKFYQSFREERIERLHVCLMPELVVQGCHEVTGTAGQQHEASQAPEIGI
LILSGLCIAKIQELTTTKG

>gi568815578f:16631703_16841002|GENSCAN_predicted_CDS_9|420_bp
atgccaactaccatcagagaatactataaacatctctatacaaataaactaggaaatcta
gaagaaatggataaatccctggacacatacaccctcccaagactaaaccaggaagaagtt
gaatctctgaatagaccaataacaggatctgaaattgaggcaatgattaatagcctacca
accaaaaaaagtccaggaccagacggattcacagccaaattctaccagagcttcagagaa
gaaagaatagaaagactccatgtgtgcctgatgcctgaacttgtcgtccagggctgccat
gaggttacagggactgcagggcagcagcatgaagcatcacaagcacctgaaataggaatc
ttgattctgagtggtctgtgcattgctaaaattcaggaacttactactactaaaggatga

>gi568815578f:16631703_16841002|GENSCAN_predicted_peptide_10|437_aa
MATEARLMSDDCYGQQSLKPALWKGVDCTQNWKAGEYRHKPYGLAAAAPRGVISPSGGAG
ENPHMLKNVSMLRTDCHRHWQTQPSACWCQAAEGRTYRSRKMRRDERRDESQGRMDKNSQ
QSKRRLGLGKDLIQTFTKSLLNLKEHILGWASGIISCWNIAEATHQGNYRPRDHPWSSPK
FEKPLVSMGPENSVVFWQDASESPCFPTDSANTYAGRCFHLIPMIQTSSIFAVLQHPLLI
PSQTGSGVNLQQTPTDLQLRVLTVRRKTNKKKGHPHQNPICTSPSSKTKERVSVIKDQMN
EMKQEEKFREKRVKRNEQSLQEIWDYVKRPNLHLIGVPESDGENGTKLENTLQDIIQENY
PNLARQSTIQIQEIQRTPQRYSLGRATPRHIIVRFTKIEMKKKMLRAAREKGRVTHKGKP
IRLTADVSAETLQARRE

>gi568815578f:16631703_16841002|GENSCAN_predicted_CDS_10|1314_bp
atggccactgaagcaagattaatgagtgatgactgctatgggcaacagagtctcaagcca
gctctgtggaagggtgtggactgcacccagaactggaaggctggggaatatcgccacaaa
ccctatgggttggcagctgctgccccaaggggtgtcatttcaccctctgggggtgcaggg
gaaaatccccacatgctgaaaaatgtcagcatgctgaggactgactgccacaggcactgg
caaactcagccttctgcctgctggtgccaagctgcagaagggaggacttaccgatccagg
aagatgaggagagatgagagaagagatgagagccaagggaggatggataaaaacagccag
caaagcaaaaggcggctgggactagggaaggatttaatacagacatttacaaagtcactg
ctgaacctaaaggagcacattctgggctgggcttcaggaatcatcagctgttggaacatt
gcagaagcgacccaccagggaaactaccggcccagagaccacccctggagttctcccaaa
ttcgagaagccactggtgtctatggggccagaaaactcagtagtcttttggcaagatgct
tcagaatctccttgtttcccaacagattcagccaacacgtatgcaggaagatgctttcac
ctcattcctatgatccaaacatcatcaatattcgctgtcctgcagcacccactgctgata
cccagtcaaacagggtctggagtgaacctccagcaaactccaacagacctgcagctgagg
gtcctgactgttagaaggaaaactaacaaaaagaaaggacatccacaccaaaaccccatc
tgtacgtcaccatcatcaaagaccaaagaaagggtatcagtgattaaagatcaaatgaat
gaaatgaagcaagaagagaagtttagagaaaaaagagtaaaaagaaatgaacaaagcctc
caagaaatatgggactatgtgaaaagaccaaatctacatcttattggtgtacctgaaagt
gacggggagaatggaaccaagttagaaaacactctgcaggacattatccaggagaactac
cccaacctagcaaggcagagcaccattcaaattcaggaaatacagagaacaccacaaaga
tactccttgggaagagcaaccccaagacatataattgtcagattcaccaagattgaaatg
aagaaaaaaatgttaagggcagccagagagaagggtcgggttacccacaaagggaagcct
atcagactaacagcagatgtctcagcagaaaccctacaagccagaagggagtga

>gi568815578f:16631703_16841002|GENSCAN_predicted_peptide_11|186_aa
MPPSYAYKNPETLAGRNISSWTLRGTHRRKKTQAAGRQKDIESTPTGTGMWKAIDRQNDA
EFGRGGQKRAPAAEQPDSRGKPPSHSLLARSSSGSYFHSIKPCTHSPSPHMIRFFWGLSS
GAPKRNVLMRIIGLFVNNYLTKIVQYSPPHLKITRKAKLTQNKQRTAQDPTDLQVWSQPA
LQVLAT

>gi568815578f:16631703_16841002|GENSCAN_predicted_CDS_11|561_bp
atgcccccatcctatgcctataaaaaccctgagaccctagcgggcagaaacataagcagc
tggacattgagaggaacacatagacggaagaagacacaagcagctggacgtcaaaaggac
atcgagagcacaccaacaggcaccggcatgtggaaggccatcgacaggcagaacgatgcg
gagtttggcaggggtggtcagaagagagctccagctgctgagcaaccagactccagggga
aaaccaccttcccactcccttcttgctcgctcatcttctgggagctacttccactcaata
aagccttgcactcattctccaagcccacatatgatccgattcttctggggtttgagcagc
ggggcaccaaagaggaatgtcctaatgcgaataattggattatttgtaaataattattta
accaaaattgtgcaatattcccctcctcacctaaagataacaagaaaggcaaagcttact
cagaataagcagagaactgctcaagatccaacggacctgcaggtatggagccagccagcc
cttcaggtcttagccacctaa

>gi568815578f:16631703_16841002|GENSCAN_predicted_peptide_12|160_aa
MKNLNEMAPPKDATSPPTTVPNQSGNLEMTETYLTCNDTNRLKVKGWRKIYHANGKRTRA
DIVILISDETAIKLTTVKKDKRRWKLNDHLNEIHNKPTEIVNMEDLQALRGYELFDFVSR
QNSKEYLPYILGVIMAIDWYHIPKTFHLEQANKYVVIVPI

>gi568815578f:16631703_16841002|GENSCAN_predicted_CDS_12|483_bp
atgaaaaatctgaatgaaatggcaccaccaaaggatgccactagccctccaacaacggtc
cctaaccaaagtggaaacttagagatgacagagacatatctcacatgtaatgacaccaat
aggctcaaagtaaagggctggagaaagatctatcatgcaaatggaaaacgaacaagagca
gacattgttattcttatttcagatgaaacagcaattaaactaacaacagtaaaaaaggac
aaaagaagatggaagctaaatgatcatctcaatgaaatacataacaaacccactgaaatt
gtaaatatggaagatttgcaggctttaagagggtatgaactgtttgactttgtgtccagg
caaaactcaaaagaataccttccttacatcctgggagtaatcatggccatagattggtac
cacatacccaagacatttcatttggagcaagccaataagtacgtggttattgtgcccatt
tag