Result of FASTA (ccds) for pF1KE0692
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE0692, 402 aa
  1>>>pF1KE0692 402 - 402 aa - 402 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 7.4082+/-0.00081; mu= 8.4050+/- 0.049
 mean_var=153.4582+/-32.433, 0's: 0 Z-trim(113.4): 135  B-trim: 353 in 1/52
 Lambda= 0.103533
 statistics sampled from 13911 (14073) to 13911 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.772), E-opt: 0.2 (0.432), width:  16
 Scan time:  3.260

The best scores are:                                      opt bits E(32554)
CCDS2662.1 STAC gene_id:6769|Hs108|chr3            ( 402) 2737 420.3 1.6e-117
CCDS77722.1 STAC gene_id:6769|Hs108|chr3           ( 341) 1451 228.1 9.5e-60
CCDS11335.1 STAC2 gene_id:342667|Hs108|chr17       ( 411)  979 157.7 1.8e-38
CCDS66405.1 STAC3 gene_id:246329|Hs108|chr12       ( 178)  431 75.6 4.2e-14
CCDS66406.1 STAC3 gene_id:246329|Hs108|chr12       ( 325)  431 75.8 6.6e-14
CCDS8936.1 STAC3 gene_id:246329|Hs108|chr12        ( 364)  431 75.8 7.3e-14


>>CCDS2662.1 STAC gene_id:6769|Hs108|chr3                 (402 aa)
 initn: 2737 init1: 2737 opt: 2737  Z-score: 2223.3  bits: 420.3 E(32554): 1.6e-117
Smith-Waterman score: 2737; 99.8% identity (100.0% similar) in 402 aa overlap (1-402:1-402)

               10        20        30        40        50        60
pF1KE0 MIPPSSPREDGVDGLPKEAVGAEQPPSPASTSSQESKLQKLKRSLSFKTKSLRSKSADNF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS26 MIPPSSPREDGVDGLPKEAVGAEQPPSPASTSSQESKLQKLKRSLSFKTKSLRSKSADNF
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE0 FQRTNSEDMKLQAHMVAEISPSSSPLPAPGSLTSTPARAGLHPGGKAHAFHEYIFKKPTF
       ::::::::::::::::::::::::::::::::::::::::::::::::::.:::::::::
CCDS26 FQRTNSEDMKLQAHMVAEISPSSSPLPAPGSLTSTPARAGLHPGGKAHAFQEYIFKKPTF
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE0 CDVCNHMIVGTNAKHGLRCKACKMSIHHKCTDGLAPQRCMGKLPKGFRRYYSSPLLIHEQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS26 CDVCNHMIVGTNAKHGLRCKACKMSIHHKCTDGLAPQRCMGKLPKGFRRYYSSPLLIHEQ
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE0 FGCIKEVMPIACGNKVDPVYETLRFGTSLAQRTKKGSSGSGSDSPHRTSTSDLVEVPEEA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS26 FGCIKEVMPIACGNKVDPVYETLRFGTSLAQRTKKGSSGSGSDSPHRTSTSDLVEVPEEA
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE0 NGPGGGYDLRKRSNSVFTYPENGTDDFRDPAKNINHQGSLSKDPLQMNTYVALYKFVPQE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS26 NGPGGGYDLRKRSNSVFTYPENGTDDFRDPAKNINHQGSLSKDPLQMNTYVALYKFVPQE
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KE0 NEDLEMRPGDIITLLEDSNEDWWKGKIQDRIGFFPANFVQRLQQNEKIFRCVRTFIGCKE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS26 NEDLEMRPGDIITLLEDSNEDWWKGKIQDRIGFFPANFVQRLQQNEKIFRCVRTFIGCKE
              310       320       330       340       350       360

              370       380       390       400  
pF1KE0 QGQITLKENQICVSSEEEQDGFIRVLSGKKKGLIPLDVLENI
       ::::::::::::::::::::::::::::::::::::::::::
CCDS26 QGQITLKENQICVSSEEEQDGFIRVLSGKKKGLIPLDVLENI
              370       380       390       400  

>>CCDS77722.1 STAC gene_id:6769|Hs108|chr3                (341 aa)
 initn: 1442 init1: 1442 opt: 1451  Z-score: 1186.2  bits: 228.1 E(32554): 9.5e-60
Smith-Waterman score: 2158; 84.6% identity (84.8% similar) in 402 aa overlap (1-402:1-341)

               10        20        30        40        50        60
pF1KE0 MIPPSSPREDGVDGLPKEAVGAEQPPSPASTSSQESKLQKLKRSLSFKTKSLRSKSADNF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 MIPPSSPREDGVDGLPKEAVGAEQPPSPASTSSQESKLQKLKRSLSFKTKSLRSKSADNF
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE0 FQRTNSEDMKLQAHMVAEISPSSSPLPAPGSLTSTPARAGLHPGGKAHAFHEYIFKKPTF
       ::::::::::::::::::::::::::::::::::::::::::::::::::.:::::::::
CCDS77 FQRTNSEDMKLQAHMVAEISPSSSPLPAPGSLTSTPARAGLHPGGKAHAFQEYIFKKPTF
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE0 CDVCNHMIVGTNAKHGLRCKACKMSIHHKCTDGLAPQRCMGKLPKGFRRYYSSPLLIHEQ
       :::::::::                                                   
CCDS77 CDVCNHMIV---------------------------------------------------
                                                                   

              190       200       210       220       230       240
pF1KE0 FGCIKEVMPIACGNKVDPVYETLRFGTSLAQRTKKGSSGSGSDSPHRTSTSDLVEVPEEA
                 ::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 ----------ACGNKVDPVYETLRFGTSLAQRTKKGSSGSGSDSPHRTSTSDLVEVPEEA
               130       140       150       160       170         

              250       260       270       280       290       300
pF1KE0 NGPGGGYDLRKRSNSVFTYPENGTDDFRDPAKNINHQGSLSKDPLQMNTYVALYKFVPQE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 NGPGGGYDLRKRSNSVFTYPENGTDDFRDPAKNINHQGSLSKDPLQMNTYVALYKFVPQE
     180       190       200       210       220       230         

              310       320       330       340       350       360
pF1KE0 NEDLEMRPGDIITLLEDSNEDWWKGKIQDRIGFFPANFVQRLQQNEKIFRCVRTFIGCKE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 NEDLEMRPGDIITLLEDSNEDWWKGKIQDRIGFFPANFVQRLQQNEKIFRCVRTFIGCKE
     240       250       260       270       280       290         

              370       380       390       400  
pF1KE0 QGQITLKENQICVSSEEEQDGFIRVLSGKKKGLIPLDVLENI
       ::::::::::::::::::::::::::::::::::::::::::
CCDS77 QGQITLKENQICVSSEEEQDGFIRVLSGKKKGLIPLDVLENI
     300       310       320       330       340 

>>CCDS11335.1 STAC2 gene_id:342667|Hs108|chr17            (411 aa)
 initn: 961 init1: 452 opt: 979  Z-score: 804.1  bits: 157.7 E(32554): 1.8e-38
Smith-Waterman score: 1084; 46.1% identity (70.8% similar) in 414 aa overlap (16-402:11-411)

               10        20        30        40        50        60
pF1KE0 MIPPSSPREDGVDGLPKEAVGAEQPPSPASTSSQESKLQKLKRSLSFKTKSLRSKSADNF
                      : .:. ...::. .: . ::.:::..:::::.::  ::::: .::
CCDS11      MTEMSEKENEPDDAA-THSPPGTVS-ALQETKLQRFKRSLSLKTI-LRSKSLENF
                    10         20         30        40         50  

               70         80             90              100       
pF1KE0 FQRTNSEDMKLQAH-MVAEISPSSSPLPAP-----GSLTSTPAR-------AGLHPGGKA
       : :..:: .:  .. ...  .:   : : :     :  : .:.        :.:.:  . 
CCDS11 FLRSGSE-LKCPTEVLLTPPTPLPPPSPPPTASDRGLATPSPSPCPVPRPLAALKPV-RL
              60        70        80        90       100        110

       110       120       130       140       150       160       
pF1KE0 HAFHEYIFKKPTFCDVCNHMIVGTNAKHGLRCKACKMSIHHKCTDGLAPQRCMGKLPKGF
       :.:.:..::. . :..:...::: :.:.::::: ::.:.:  :.. .. :.: ::   .:
CCDS11 HSFQEHVFKRASPCELCHQLIVG-NSKQGLRCKMCKVSVHLWCSEEISHQQCPGKTSTSF
              120       130        140       150       160         

       170       180          190       200       210       220    
pF1KE0 RRYYSSPLLIHEQFG-CI--KEVMPIACGNKVDPVYETLRFGTSLAQRTKKGSSGSGSDS
       :: .:::::.::    :   ::  : . ..::::::::::.:::::   ...: .: :.:
CCDS11 RRNFSSPLLVHEPPPVCATSKESPPTGDSGKVDPVYETLRYGTSLAL-MNRSSFSSTSES
     170       180       190       200       210        220        

          230       240             250       260          270     
pF1KE0 PHRTSTSDLVEVPEEANGP------GGGYDLRKRSNSVFTYP---ENGTDDFRDPAKNIN
       : : : :.  :. :...:       : :      .. ::: :   :.   . ..:.... 
CCDS11 PTR-SLSERDELTEDGEGSIRSSEEGPG----DSASPVFTAPAESEGPGPEEKSPGQQLP
      230        240       250           260       270       280   

         280       290       300       310       320       330     
pF1KE0 HQGSLSKDPLQMNTYVALYKFVPQENEDLEMRPGDIITLLEDSNEDWWKGKIQDRIGFFP
        ...: ::   : .:::::::.::::.:: ..::: : :..::::::::::: ::.::::
CCDS11 -KATLRKDVGPMYSYVALYKFLPQENNDLALQPGDRIMLVDDSNEDWWKGKIGDRVGFFP
            290       300       310       320       330       340  

         340       350       360       370         380       390   
pF1KE0 ANFVQRLQQNEKIFRCVRTFIGCKEQGQITLKENQICVS--SEEEQDGFIRVLSGKKKGL
       ::::::.. .:...:: . : : :::: ..::::::::.    .. :::::: ::::.::
CCDS11 ANFVQRVRPGENVWRCCQPFSGNKEQGYMSLKENQICVGVGRSKDADGFIRVSSGKKRGL
            350       360       370       380       390       400  

           400  
pF1KE0 IPLDVLENI
       .:.:.: .:
CCDS11 VPVDALTEI
            410 

>>CCDS66405.1 STAC3 gene_id:246329|Hs108|chr12            (178 aa)
 initn: 417 init1: 417 opt: 431  Z-score: 366.7  bits: 75.6 E(32554): 4.2e-14
Smith-Waterman score: 431; 41.7% identity (76.4% similar) in 144 aa overlap (260-402:35-178)

     230       240       250       260       270       280         
pF1KE0 TSDLVEVPEEANGPGGGYDLRKRSNSVFTYPENGTDDFRDPAKNINHQGSLSKDPLQMNT
                                     :..:. .    :.. . . . ..  .:.. 
CCDS66 ERKKGQADKKNPVAAMMEEEPESARPEEGKPQDGNPEGDKKAEKKTPDDKHKQPGFQQSH
           10        20        30        40        50        60    

     290        300       310       320       330       340        
pF1KE0 Y-VALYKFVPQENEDLEMRPGDIITLLEDSNEDWWKGKIQDRIGFFPANFVQRLQQNEKI
       : ::::.:   :..::.. ::. ::...::::.::.::: ...:::: ::. :.. .:..
CCDS66 YFVALYRFKALEKDDLDFPPGEKITVIDDSNEEWWRGKIGEKVGFFPPNFIIRVRAGERV
           70        80        90       100       110       120    

      350       360       370       380       390       400  
pF1KE0 FRCVRTFIGCKEQGQITLKENQICVSSEEEQDGFIRVLSGKKKGLIPLDVLENI
        : .:.:.: .: ::::::..:: :.. .:  :...: .:.: ::.: : ::.:
CCDS66 HRVTRSFVGNREIGQITLKKDQIVVQKGDEAGGYVKVYTGRKVGLFPTDFLEEI
          130       140       150       160       170        

>>CCDS66406.1 STAC3 gene_id:246329|Hs108|chr12            (325 aa)
 initn: 692 init1: 417 opt: 431  Z-score: 363.1  bits: 75.8 E(32554): 6.6e-14
Smith-Waterman score: 797; 40.9% identity (69.8% similar) in 298 aa overlap (106-402:49-325)

          80        90       100       110       120       130     
pF1KE0 VAEISPSSSPLPAPGSLTSTPARAGLHPGGKAHAFHEYIFKKPTFCDVCNHMIVGTNAKH
                                     : : :....:::: ::::: .:::  : : 
CCDS66 GPIYYIYEEEEEEEEEEEEPPPEPPKLVNDKPHKFKDHFFKKPKFCDVCARMIV-LNNKF
       20        30        40        50        60        70        

         140       150       160       170       180       190     
pF1KE0 GLRCKACKMSIHHKCTDGLAPQRCMGKLPKGFRRYYSSPLLIHEQFGCIKEVMPIACGNK
       ::::: :: .::..: . .  :::.::.: ::.: :::::  ..:..:.:.   .. .:.
CCDS66 GLRCKNCKTNIHEHCQSYVEMQRCFGKIPPGFHRAYSSPLYSNQQYACVKD---LSAANR
        80        90       100       110       120          130    

         200       210       220       230       240       250     
pF1KE0 VDPVYETLRFGTSLAQRTKKGSSGSGSDSPHRTSTSDLVEVPEEANGPGGGYDLRKRSNS
        :::.:::: :. .:.. .:    .:. . .   .. . : :: :  :  :         
CCDS66 NDPVFETLRTGVIMANKERK----KGQADKKNPVAAMMEEEPESAR-PEEGK--------
          140       150           160       170        180         

         260       270       280       290        300       310    
pF1KE0 VFTYPENGTDDFRDPAKNINHQGSLSKDPLQMNTY-VALYKFVPQENEDLEMRPGDIITL
           :..:. .    :.. . . . ..  .:.. : ::::.:   :..::.. ::. ::.
CCDS66 ----PQDGNPEGDKKAEKKTPDDKHKQPGFQQSHYFVALYRFKALEKDDLDFPPGEKITV
                 190       200       210       220       230       

          320       330       340       350       360       370    
pF1KE0 LEDSNEDWWKGKIQDRIGFFPANFVQRLQQNEKIFRCVRTFIGCKEQGQITLKENQICVS
       ..::::.::.::: ...:::: ::. :.. .:.. : .:.:.: .: ::::::..:: :.
CCDS66 IDDSNEEWWRGKIGEKVGFFPPNFIIRVRAGERVHRVTRSFVGNREIGQITLKKDQIVVQ
       240       250       260       270       280       290       

          380       390       400  
pF1KE0 SEEEQDGFIRVLSGKKKGLIPLDVLENI
       . .:  :...: .:.: ::.: : ::.:
CCDS66 KGDEAGGYVKVYTGRKVGLFPTDFLEEI
       300       310       320     

>>CCDS8936.1 STAC3 gene_id:246329|Hs108|chr12             (364 aa)
 initn: 692 init1: 417 opt: 431  Z-score: 362.4  bits: 75.8 E(32554): 7.3e-14
Smith-Waterman score: 807; 36.0% identity (63.2% similar) in 394 aa overlap (17-402:4-364)

               10        20        30        40           50       
pF1KE0 MIPPSSPREDGVDGLPKEAVGAEQPPSPASTSSQESKLQKLKRSL---SFKTKSLR----
                       ::.. . .:  :: :  ..: ::.::. :   :  :: ..    
CCDS89              MTEKEVLESPKPSFPAET--RQSGLQRLKQLLRKGSTGTKEMELPPE
                            10          20        30        40     

            60        70        80        90       100       110   
pF1KE0 SKSADNFFQRTNSEDMKLQAHMVAEISPSSSPLPAPGSLTSTPARAGLHPGGKAHAFHEY
        ..  .     ..  . .  .   :      : : : .:..           : : :...
CCDS89 PQANGEAVGAGGGPIYYIYEEEEEEEEEEEEPPPEPPKLVND----------KPHKFKDH
          50        60        70        80                  90     

           120       130       140       150       160       170   
pF1KE0 IFKKPTFCDVCNHMIVGTNAKHGLRCKACKMSIHHKCTDGLAPQRCMGKLPKGFRRYYSS
       .:::: ::::: .:::  : : ::::: :: .::..: . .  :::.::.: ::.: :::
CCDS89 FFKKPKFCDVCARMIV-LNNKFGLRCKNCKTNIHEHCQSYVEMQRCFGKIPPGFHRAYSS
         100       110        120       130       140       150    

           180       190       200       210       220       230   
pF1KE0 PLLIHEQFGCIKEVMPIACGNKVDPVYETLRFGTSLAQRTKKGSSGSGSDSPHRTSTSDL
       ::  ..:..:.:.   .. .:. :::.:::: :. .:.. .:    .:. . .   .. .
CCDS89 PLYSNQQYACVKD---LSAANRNDPVFETLRTGVIMANKERK----KGQADKKNPVAAMM
          160          170       180       190           200       

           240       250       260       270       280       290   
pF1KE0 VEVPEEANGPGGGYDLRKRSNSVFTYPENGTDDFRDPAKNINHQGSLSKDPLQMNTY-VA
        : :: :  :  :             :..:. .    :.. . . . ..  .:.. : ::
CCDS89 EEEPESAR-PEEGK------------PQDGNPEGDKKAEKKTPDDKHKQPGFQQSHYFVA
       210        220                   230       240       250    

            300       310       320       330       340       350  
pF1KE0 LYKFVPQENEDLEMRPGDIITLLEDSNEDWWKGKIQDRIGFFPANFVQRLQQNEKIFRCV
       ::.:   :..::.. ::. ::...::::.::.::: ...:::: ::. :.. .:.. : .
CCDS89 LYRFKALEKDDLDFPPGEKITVIDDSNEEWWRGKIGEKVGFFPPNFIIRVRAGERVHRVT
          260       270       280       290       300       310    

            360       370       380       390       400  
pF1KE0 RTFIGCKEQGQITLKENQICVSSEEEQDGFIRVLSGKKKGLIPLDVLENI
       :.:.: .: ::::::..:: :.. .:  :...: .:.: ::.: : ::.:
CCDS89 RSFVGNREIGQITLKKDQIVVQKGDEAGGYVKVYTGRKVGLFPTDFLEEI
          320       330       340       350       360    




402 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sat Nov  5 08:03:25 2016 done: Sat Nov  5 08:03:26 2016
 Total Scan time:  3.260 Total Display time:  0.030

Function used was FASTA [36.3.4 Apr, 2011]
Inquiries or Suggestions ?
Send a message to flexiclone AT kazusagt.com