GENSCAN 1.0	Date run:  5-Nov-116	Time: 07:53:24

Sequence gi568815579f:47734444_47939964 : 205521 bp : 48.99% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   1926   2090  165  2  0   50   75   295 0.996  24.56
 1.02 Term +   6438   6989  552  2  0   85   52  1283 0.975 118.71
 1.03 PlyA +   8669   8674    6                               1.05

 2.00 Prom +  10624  10663   40                              -8.16
 2.01 Init +  11117  11340  224  1  2  101   87   204 0.971  19.63
 2.02 Intr +  12524  12588   65  2  2  100  100   107 0.963  11.46
 2.03 Intr +  15735  15843  109  1  1  116   70    86 0.997   8.94
 2.04 Intr +  16465  16664  200  1  2   73   79   272 0.982  23.79
 2.05 Intr +  17077  17147   71  2  2  102  100    72 0.974   8.70
 2.06 Intr +  18069  18164   96  2  0   99   86    60 0.956   7.11
 2.07 Intr +  20084  20188  105  1  0   89   99   178 0.999  19.41
 2.08 Intr +  20266  20448  183  0  0  125   93   178 0.995  21.98
 2.09 Intr +  20905  21080  176  0  2  123   52   186 0.999  17.24
 2.10 Intr +  21313  21379   67  1  1  115   42   134 0.838  10.41
 2.11 Intr +  22085  22161   77  1  2  114   80   100 0.999  10.11
 2.12 Intr +  22245  22301   57  0  0   98   81   143 0.582  12.60
 2.13 Intr +  44322  44502  181  0  1   43   31    93 0.053  -1.03
 2.14 Intr +  46421  46474   54  1  0   93   78   106 0.992   9.28
 2.15 Intr +  46665  46739   75  2  0   96   95    32 0.938   4.41
 2.16 Term +  46847  46927   81  1  0  137   38   187 0.999  16.29
 2.17 PlyA +  50217  50222    6                               1.05

 3.02 PlyA -  51619  51614    6                               1.05
 3.01 Sngl -  60459  60112  348  0  0   68   37   373 0.999  26.24
 3.00 Prom -  61453  61414   40                              -4.26

 4.04 PlyA -  61496  61491    6                               1.05
 4.03 Term -  63747  63589  159  0  0  102   43   117 0.446   6.54
 4.02 Intr -  69230  69061  170  0  2  126   41   251 0.629  23.87
 4.01 Init -  84661  84529  133  1  1   78   66   122 0.753   9.30
 4.00 Prom -  95577  95538   40                              -6.26

 5.00 Prom +  95644  95683   40                              -8.56
 5.01 Init +  99328  99358   31  0  1   49   61    50 0.456  -1.69
 5.02 Intr +  99966 100100  135  1  0  111   89   106 0.890  13.54
 5.03 Intr + 101800 101951  152  2  2   84   75   225 0.982  20.68
 5.04 Term + 104877 105524  648  2  0  127   44   372 0.999  30.78
 5.05 PlyA + 106684 106689    6                               1.05

 6.00 Prom + 112289 112328   40                              -6.96
 6.01 Init + 115397 115448   52  1  1   92   46    32 0.275   0.75
 6.02 Intr + 125670 125839  170  1  2  126   41   251 0.999  23.87
 6.03 Term + 126890 127069  180  1  0   43   50   200 0.611   9.31
 6.04 PlyA + 127938 127943    6                               1.05

 7.05 PlyA - 128126 128121    6                               1.05
 7.04 Term - 137124 137012  113  1  2  133   39   136 0.998  11.92
 7.03 Intr - 140391 140214  178  0  1  113   93   120 0.999  14.49
 7.02 Intr - 144687 144593   95  1  2   68   89   115 0.944   9.28
 7.01 Init - 151814 151679  136  2  1   73  110     0 0.425   1.00
 7.00 Prom - 153959 153920   40                              -5.76

 8.00 Prom + 166563 166602   40                              -5.16
 8.01 Init + 167624 167672   49  1  1   86   58    34 0.087  -0.69
 8.02 Intr + 168209 168269   61  0  1   80   73    45 0.047  -0.01
 8.03 Intr + 172229 172420  192  2  0   81   53    89 0.064   3.31
 8.04 Intr + 177605 177796  192  2  0   89   43   112 0.233   5.41
 8.05 Intr + 182978 183169  192  2  0   81   53   116 0.255   6.01
 8.06 Intr + 188329 188520  192  1  0   81   53    92 0.457   3.61
 8.07 Intr + 193373 193564  192  2  0   89   43   110 0.643   5.21
 8.08 Intr + 198731 198922  192  2  0   81   53    92 0.009   3.61
 8.09 Intr + 204086 204277  192  2  0   89   43   112 0.007   5.41
 8.10 Intr + 204974 205083  110  2  2   86   82    31 0.005   2.23

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815579f:47734444_47939964|GENSCAN_predicted_peptide_1|238_aa
VHAYIISYLKKEMPSVFGKENKKKQLILKLPVIFAKIQLEHHISPGDFPDCQKMQELLMA
HDFTKFHSLKPKLLEALDEMLTHDIAKLMPLLRQEELESTEVGVQGGAFEGTHMGPFVER
GPDEAMEDGEEGSDDEAEWVVTKDKSKYDEIFYNLAPADGKLSGSKAKTWMVGTKLPNSV
LGRIWKLSDVDRDGMLDDEEFALASHLIEAKLEGHGLPANLPRRLVPPSKRRHKGSAE

>gi568815579f:47734444_47939964|GENSCAN_predicted_CDS_1|717_bp
gttcacgcttacatcatcagctacctgaagaaggagatgccctctgtgtttgggaaggag
aacaagaagaagcagctgatcctcaaactgcccgtcatctttgcgaagattcagctggaa
catcacatctcccctggggactttcctgattgccagaaaatgcaggagctgctgatggcg
cacgacttcaccaagtttcactcgctgaagccgaagctgctagaggcactggacgagatg
ctgacgcacgacatcgccaagctcatgcccctgctgcggcaggaggagctggagagcacc
gaggtgggcgtgcaggggggcgcttttgagggcacccacatgggcccgtttgtggagcgg
ggacctgacgaggccatggaggacggcgaggagggctcggacgacgaggccgagtgggtg
gtgaccaaggacaagtccaaatacgacgagatcttctacaacctggcgcctgccgacggc
aagctgagcggctccaaggccaagacctggatggtggggaccaagctccccaactcagtg
ctggggcgcatctggaagctcagcgatgtggaccgcgacggcatgctggatgatgaggag
ttcgcgctggccagccacctcatcgaggccaagctggaaggccacgggctgcccgccaac
ctgccccgtcgcctggtgccaccctccaagcgacgccacaagggctccgccgagtga

>gi568815579f:47734444_47939964|GENSCAN_predicted_peptide_2|606_aa
MAAGGSGVGGKRSSKSDADSGFLGLRPTSVDPALRRRRRGPRNKKRGWRRLAQEPLGLEV
DQFLEDVRLQERTSGGLLSEAPNEKLFFVDTGSKEKGLTKKRTKVQKKSLLLKKPLRVDL
ILENTSKVPAPKDVLAHQVPNAKKLRRKEQLWEKLAKQGELPREVRRAQARLLNPSATRA
KPGPQDTVERPFYDLWASDNPLDRPLVGQDEFFLEQTKKKGVKRPARLHTKPSQAPAVEV
APAGASYNPSFEDHQTLLSAAHEVELQRQKEAEKLERQLALPATEQAATQESTFQELCEG
LLEESDGEGEPGQGEGPEAGDAEVCPTPARLATTEKKTEQQRRREKAVHRLRVQQAALRA
ARLRHQELFRLRGIKAQVALRLAELARRQRRRQARREAEADKPRRLGRLKYQAPDIDVQL
SSELTDSLRTLKPEGNILRDRFKSFQRRNMIEPRERAKFKRKYKVKLVEKRAFREIHGCG
SPEPWLSPSESFIGKPSGQRPPSPTPAGTRFSEPGSGSPGERTHGSPCMGKGSPCMWYLQ
LKKKLEDEFPGRLDICGEGTPQATGFFEVMVAGKLIHSKKKGDGYVDTESKFLKLVAAIK
AALAQG

>gi568815579f:47734444_47939964|GENSCAN_predicted_CDS_2|1821_bp
atggcggcaggaggcagtggcgttggtgggaagcgcagctcgaaaagcgatgccgattct
ggtttcctggggctgcggcccacttcggtggacccagcgctgaggcggcggcggcgaggc
ccaagaaataagaagcggggctggcggcggcttgctcaggagccgctggggctggaggtt
gaccagttcctggaagacgtgcggctacaggagcgcacgagcggtggcttgttgtcagag
gccccaaatgaaaaactcttcttcgtggacactggctccaaggaaaaagggctgacaaag
aagagaaccaaagtccagaagaagtcactgcttctcaagaaaccccttcgggttgacctc
atcctcgagaacacatccaaagtccctgcccccaaagacgtcctcgcccaccaggtcccc
aacgccaagaagctcaggcggaaggagcagctatgggagaagctggccaagcagggcgag
ctgccccgggaggtgcgcagggcccaggcccggctcctcaacccttctgcaacaagggcc
aagcccgggccccaggacaccgtagagcggcccttctacgacctctgggcctcagacaac
cccctggacaggccgttggttggccaggatgagtttttcctggagcagaccaagaagaaa
ggagtgaagcggccagcacgcctgcacaccaagccgtcccaggcacccgccgtggaggtg
gcgcctgccggagcttcctacaatccatcctttgaagaccaccagaccctgctctcagcg
gcccacgaggtggagttgcagcggcagaaggaggcggagaagctggagcggcagctggcc
ctgcccgccacggagcaggccgccacccaggagtccacattccaggagctgtgcgagggg
ctgctggaggagtcggatggtgagggggagccaggccagggcgaggggccggaggctggg
gatgccgaggtctgtcccacgcccgcccgcctggccaccacagagaagaagacggagcag
cagcggcggcgggagaaggctgtgcacaggctgcgggtacagcaggccgcgttgcgggcc
gcccggctccggcaccaggagctgttccggctgcgcgggatcaaggcccaggtggccctg
aggctggcggagctggcgcggcggcagaggcggcggcaggcgcggcgggaggctgaggct
gacaagccccgaaggctggggcggctcaagtaccaggcacctgacatcgacgtgcagctg
agctcggagctgacagactcgctcaggaccctgaagcccgagggcaacatccttcgagac
cggttcaagagcttccagaggaggaatatgatcgagcctcgagagagagccaagttcaaa
cgcaagtacaaggtgaagctggtggagaagcgggcgttccgtgagatccacggatgtggc
agccccgagccatggctctcgccgtccgagtcgtttattggtaagcccagcggccagcgg
cccccgtccccgacccccgccgggacccgattctcggagccggggtcagggagccccggg
gagaggacccatgggagcccttgtatgggaaaagggagcccctgtatgtggtatcttcag
ctcaagaagaagttagaagatgagttccccggccgcctggacatctgcggcgagggaact
ccccaggccaccgggttctttgaagtgatggtagccgggaagttgattcactctaagaag
aaaggcgatggctacgtggacacagaaagcaagtttctgaagttggtggccgccatcaaa
gccgccttggctcagggctaa

>gi568815579f:47734444_47939964|GENSCAN_predicted_peptide_3|115_aa
MLPKAKEAPASPKAQAKPKALKAKKAVLKAVHSHTEEKIRRSPTFRRPKTARLRREPKYP
QKSAPWRNKLGHSAIITFPPTTESAMKKTDDNNTLAFIIDVKAKEHQIKQAVKKL

>gi568815579f:47734444_47939964|GENSCAN_predicted_CDS_3|348_bp
atgctgccgaaagcgaaggaagctcctgcctctcctaaagcccaagccaaaccgaaggct
ttaaaggccaagaaagcagtgttgaaagccgtccacagccacacagaagagaagatccgc
aggtcacccaccttcaggcggcccaagacagcgcgactccggagggagcccaaatatcct
cagaagagcgccccctggagaaacaagcttggccactctgcgatcatcacgtttccgccg
accactgagtccgccatgaagaagacagacgacaacaacacacttgccttcattatagat
gttaaagccaaggagcaccagatcaaacaggctgtgaagaagctctga

>gi568815579f:47734444_47939964|GENSCAN_predicted_peptide_4|153_aa
MEYYAAIKKDEFMSYAGTWMKLETIILSKLSQGQKTKHRMLSLIGPPLALDPPRRQRQER
TVYTESQQKVLEFYFQKDQYPNYDQRLNLAEMLSLREQQLQSPVRRHLQNLSRVTEELKG
RWDILVDDVKTLLKPVLAPSHASLLAVRLQLQQ

>gi568815579f:47734444_47939964|GENSCAN_predicted_CDS_4|462_bp
atggaatactatgcagccataaaaaaggatgagttcatgtcctatgcagggacatggatg
aagctggaaaccatcattctgagcaaactatcacaaggacagaaaaccaaacaccgcatg
ctctcgctcataggccctcccctggccctggaccctccaaggagacagcggcaggagcgc
acggtctacactgaaagccagcagaaagtgctagaattttactttcagaaggaccagtac
ccgaactacgaccagcgactgaatctggcggagatgctcagcctcagggagcaacagctg
cagagcccggtgaggcggcatctgcagaatctcagccgggtcacagaagagttgaagggg
agatgggacatattggtggatgatgtcaaaacccttctcaagcccgtgctggcaccttct
catgcctccttactggccgtgagacttcagttacagcagtag

>gi568815579f:47734444_47939964|GENSCAN_predicted_peptide_5|321_aa
MVKKEGILDEGPLTWASVSPKIMMAYMNPGPHYSVNALALSGPSVDLMHQAVPYPSAPRK
QRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPESRVQVWFKNRRAKCRQQR
QQQKQQQQPPGGQAKARPAKRKAGTSPRPSTDVCPDPLGISDSYSPPLPGPSGSPTTAVA
TVSIWSPASESPLPEAQRAGLVASGPSLTSAPYAMTYAPASAFCSSPSAYGSPSSYFSGL
DPYLSPMVPQLGGPALSPLSGPSVGPSLAQSPTSLSGQSYGAYSPVDSLEFKDPTGTWKF
TYNPMDPLDYKDQSAWKFQIL

>gi568815579f:47734444_47939964|GENSCAN_predicted_CDS_5|966_bp
atggtcaagaaagaagggatcttggatgagggccccctgacttgggcctcagtgtccccg
aagatcatgatggcgtatatgaacccggggccccactattctgtcaacgccttggcccta
agtggccccagtgtggatctgatgcaccaggctgtgccctacccaagcgcccccaggaag
cagcggcgggagcgcaccaccttcacccggagccaactggaggagctggaggcactgttt
gccaagacccagtacccagacgtctatgcccgtgaggaggtggctctgaagatcaatctg
cctgagtccagggttcaggtttggttcaagaaccggagggctaaatgcaggcagcagcga
cagcagcagaaacagcagcagcagcccccagggggccaggccaaggcccggcctgccaag
aggaaggcgggcacgtccccaagaccctccacagatgtgtgtccagaccctctgggcatc
tcagattcctacagtccccctctgcccggcccctcaggctccccaaccacggcagtggcc
actgtgtccatctggagcccagcctcagagtcccctttgcctgaggcgcagcgggctggg
ctggtggcctcagggccgtctctgacctccgccccctatgccatgacctacgccccggcc
tccgctttctgctcttccccctccgcctatgggtctccgagctcctatttcagcggccta
gacccctacctttctcccatggtgccccagctagggggcccggctcttagccccctctct
ggcccctccgtgggaccttccctggcccagtcccccacctccctatcaggccagagctat
ggcgcctacagccccgtggatagcttggaattcaaggaccccacgggcacctggaaattc
acctacaatcccatggaccctctggactacaaggatcagagtgcctggaagtttcagatc
ttgtag

>gi568815579f:47734444_47939964|GENSCAN_predicted_peptide_6|133_aa
MGIQLLTCTWGAGKDNDCPPLALDPPRRQRQERTVYTESQQKVLEFYFQKDQYPNYDQRL
NLAEMLSLREQQLQSPYASNLSPDTQLYPDFTKLLPLLDRFEESSLSTTTSQYKEEDGFV
DKNHSVPRSLLDL

>gi568815579f:47734444_47939964|GENSCAN_predicted_CDS_6|402_bp
atgggaatccagctcctgacatgcacctggggcgctgggaaagacaatgactgccctccc
ctggccctggaccctccaaggagacagcggcaggagcgcacggtctacactgaaagccag
cagaaagtgctagaattttactttcagaaggaccagtacccgaactacgaccagcgactg
aatctggcggagatgctcagcctcagggagcaacagctgcagagcccctatgcctccaac
ttgtcgccagacacccagttataccctgacttcaccaagctgctcccgctcctagaccgg
ttcgaggaatcctcactctccaccacgacgtctcagtacaaagaggaggatggcttcgtg
gacaaaaatcactcagtccccaggtcattactggatttatag

>gi568815579f:47734444_47939964|GENSCAN_predicted_peptide_7|173_aa
MSDDFLWFEGIAFPTMGFRSETLRKVRDEFVIRDEDVIILTYPKSVLYGSWFDHIHGWMP
MREEKNFLLLSYEELKQDTGRTIEKICQFLGKTLEPEELNLILKNSSFQSMKENKMSNYS
LLSVDYVVDKAQLLRKGVSGDWKNHFTVAQAEDFDKLFQEKMADLPRELFPWE

>gi568815579f:47734444_47939964|GENSCAN_predicted_CDS_7|522_bp
atgtcggacgatttcttatggtttgaaggcatagctttccctactatgggtttcagatcc
gaaaccttaagaaaagtacgtgatgagttcgtgataagggatgaagatgtaataatattg
acttaccccaaatcagtgctatatgggtcatggtttgaccacattcatggctggatgccc
atgagagaggagaaaaacttcctgttactgagttatgaggagctgaaacaggacacagga
agaaccatagagaagatctgtcaattcctgggaaagacgttagaacccgaagaactgaac
ttaattctcaagaacagctcctttcagagcatgaaagaaaacaagatgtccaattattcc
ctcctgagtgttgattatgtagtggacaaagcacaacttctgagaaaaggtgtatctggg
gactggaaaaatcacttcacagtggcccaagctgaagactttgataaattgttccaagag
aagatggcagatcttcctcgagagctgttcccatgggaataa

>gi568815579f:47734444_47939964|GENSCAN_predicted_peptide_8|522_aa
MGFHHVGQAGLQLLTSGSSILPEDLQNLQIFLLEKPHHTGLLTVPVAAGMCPHWASVLAV
PTARTPSCTICTVQYGRLWPHMATEQLNMAGPNQHFQDVVCHTGLLTVPVAAGMCPHRAS
VLAVPTARTPSCTICTVQYGRLWPHMATEQLNMAGPNQDFQDVVCHTGLLTVPVAAGMCP
HWASVLAVPTARTPSCTICTVQYGRLWPHMATEQLNMAGPNQDFQDVVCHTGLLTVPVAA
GMCPHWASVLAVPTARTPSCTICTVQYGRLWPHMATEQLNMAGPNQHFQDVVCHTGLLTV
PVEAGMCPHRASVLAVPTARTPSCTICTVQYGRLWPHMATEQLNMAGPNQDFQDVVCHTG
LLTVPVAAGMCPHWASVLAVPTARTPSCTICTVQYGRLWPHMATEQLNMAGPNQHFQDVV
CHTGLLTVPVAAGMCPHRASVLAVPTARTPSCTICTVQYGRLWPHMATEQLNMAGPNQDF
QDVVWGRHGTQGPHWPWGLGDVRGEPLVIGSLTLRKIKGPKX

>gi568815579f:47734444_47939964|GENSCAN_predicted_CDS_8|1566_bp
atggggtttcaccatgttggccaggctggtctccaactcctgacctcaggttcatcaatc
ttgccagaagatctgcagaatctgcagatattcttactagagaagccgcaccacacgggg
ctcctcactgttcccgtagcagcaggcatgtgcccccactgggcctctgtactggctgtt
cccactgcccgaacaccctcatgcaccatctgcactgtccaatatggccgcctctggcca
cacatggctactgagcagttgaacatggctggtccaaaccaacatttccaagacgtcgta
tgccacacggggctcctcactgttcccgtagcagcaggcatgtgcccccacagggcctct
gtactggctgttcccactgcccgaacaccctcatgcaccatctgcactgtccaatacggc
cgcctctggccacacatggctactgagcagttgaacatggctggtccaaaccaagatttc
caagacgtcgtgtgccacacggggctcctcactgttcccgtagcagcaggcatgtgcccc
cactgggcctctgtactggctgttcccactgcccgaacaccctcatgcaccatctgcact
gtccaatacggccgcctctggccacacatggctactgagcagttgaacatggctggtcca
aaccaagatttccaagacgtcgtatgccacacggggctcctcactgttcccgtagcagca
ggcatgtgcccccactgggcctctgtactggctgttcccactgcccgaacaccctcatgc
accatctgcactgtccaatacggccgcctctggccacacatggctactgagcagttgaac
atggctggtccaaaccaacatttccaagacgtcgtatgccacacggggctcctcactgtt
cccgtagaagcaggcatgtgcccccacagggcctctgtactggctgttcccactgcccga
acaccctcatgcaccatctgcactgtccaatacggccgcctctggccacacatggctact
gagcagttgaacatggctggtccaaaccaagatttccaagacgtcgtgtgccacacgggg
ctcctcactgttcccgtagcagcaggcatgtgcccccactgggcctctgtactggctgtt
cccactgcccgaacaccctcatgcaccatctgcactgtccaatacggccgcctctggcca
cacatggctactgagcagttgaacatggctggtccaaaccaacatttccaagacgtcgta
tgccacacggggctcctcactgttcccgtagcagcaggcatgtgcccccacagggcctct
gtactggctgttcccactgcccgaacaccctcatgcaccatctgcactgtccaatacggc
cgcctctggccacacatggctactgagcagttgaacatggctggtccaaaccaagatttc
caagacgtcgtgtgggggcgccatggaacgcagggccctcactggccctggggactgggt
gacgtcaggggtgagcctctggtgattggctccctcaccctgcgtaagatcaaagggcct
aaagnn