GENSCAN 1.0	Date run:  5-Nov-116	Time: 07:16:09

Sequence gi568815595f:113678754_113909424 : 230671 bp : 39.74% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.04 PlyA -   1142   1137    6                               1.05
 1.03 Term -   7591   7451  141  1  0   94   41    46 0.590  -2.55
 1.02 Intr -  12779  12625  155  0  2   55   92   110 0.732   6.97
 1.01 Init -  17680  17617   64  1  1   90  114   202 0.999  22.36
 1.00 Prom -  31640  31601   40                              -4.65

 2.03 PlyA -  32021  32016    6                               1.05
 2.02 Term -  43184  43007  178  1  1   95   47   243 0.965  17.08
 2.01 Init -  46042  45840  203  1  2   73   63    30 0.217  -2.55
 2.00 Prom -  57659  57620   40                              -2.65

 3.00 Prom +  60653  60692   40                              -4.95
 3.01 Init +  62427  62539  113  2  2   25   83   127 0.669   5.63
 3.02 Term +  66784  67276  493  1  1   18   36   312 0.675  12.09
 3.03 PlyA +  69832  69837    6                               1.05

 4.00 Prom +  76548  76587   40                              -6.25
 4.01 Init + 100001 100082   82  1  1   51  119    52 0.849   5.78
 4.02 Intr + 102297 102389   93  1  0   66   23   140 0.478   4.32
 4.03 Intr + 105471 105685  215  1  2   40   79   225 0.554  14.31
 4.04 Intr + 105943 106080  138  0  0   29   84    97 0.898   3.14
 4.05 Intr + 107479 107630  152  0  2   70   94   178 0.999  14.64
 4.06 Intr + 109960 110122  163  1  1   82   58   176 0.997  13.06
 4.07 Intr + 110979 111087  109  2  1   52  105    70 0.992   4.04
 4.08 Intr + 116119 116241  123  2  0   80  111    99 0.992  11.04
 4.09 Intr + 116337 116451  115  1  1  107   68    79 0.985   6.39
 4.10 Intr + 117123 117186   64  0  1   58   91    62 0.976   1.30
 4.11 Intr + 119490 119693  204  2  0   78  113   190 0.991  18.97
 4.12 Intr + 124830 124924   95  2  2  101  115   106 0.999  12.44
 4.13 Intr + 126601 126772  172  1  1   97   71   145 0.999  12.72
 4.14 Term + 130582 130674   93  0  0   90   43   138 0.998   6.35
 4.15 PlyA + 132437 132442    6                               1.05

 5.06 PlyA - 132451 132446    6                               1.05
 5.05 Term - 137783 137592  192  2  0   56   48   121 0.222   1.34
 5.04 Intr - 147410 147377   34  1  1   75  105    19 0.447  -0.39
 5.03 Intr - 149657 149412  246  1  0   47   89   198 0.321  11.45
 5.02 Intr - 160086 159968  119  0  2   38   36   107 0.104  -1.16
 5.01 Init - 160484 160332  153  2  0  101   17   111 0.278   5.33
 5.00 Prom - 163909 163870   40                              -4.15

 6.02 PlyA - 165249 165244    6                               1.05
 6.01 Sngl - 171762 171484  279  0  0   33   41   246 0.657   9.76
 6.00 Prom - 177132 177093   40                              -2.85

 7.00 Prom + 190766 190805   40                              -4.35
 7.01 Init + 206545 206718  174  0  0   43   94   187 0.956  12.78
 7.02 Term + 206832 207278  447  2  0   47   48   319 0.929  18.03
 7.03 PlyA + 207879 207884    6                               1.05

 8.03 PlyA - 210096 210091    6                               1.05
 8.02 Term - 216848 216720  129  2  0  109   47    55 0.299   0.70
 8.01 Intr - 224884 224622  263  2  2   94   42   235 0.100  15.78

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815595f:113678754_113909424|GENSCAN_predicted_peptide_1|119_aa
MTQAGVAAVAAATAAETAQPADFRNGTEKISEGKAGYYCQKAKTTDLLQSSSDLAVWKSF
VELGLSSFRNKSQPCRENRCAWGRESKVIVQLCIGIQCCSVTVESNTGQNSADAHRGSI

>gi568815595f:113678754_113909424|GENSCAN_predicted_CDS_1|360_bp
atgacccaggcgggggtcgccgccgtcgccgccgccaccgcggccgagaccgcgcagccg
gcggatttcaggaatgggacagagaagatctccgaaggaaaggcaggatattattgtcag
aaggccaaaacaacagatttattacaaagttcatcggatttggcagtgtggaagtctttt
gttgagcttggtttaagcagttttaggaataaaagtcagccatgcagagagaatcgctgt
gcttgggggagggagagcaaagtgattgtgcaactttgcattggaattcagtgttgctct
gtcacagtggaaagcaacacagggcagaattcagctgatgcccacagagggagcatttag

>gi568815595f:113678754_113909424|GENSCAN_predicted_peptide_2|126_aa
MRATAPMIRRVPLTTWELWELQDEIWMGTQPNHITPVAFLMDSFHPGVIFKMVDSFVSFP
ATLVLKMGHVQISNESAIDFYRKFGFEIIETKKNYYKRIEPADAHVLQKNLKVPSGQNAD
VQKTDN

>gi568815595f:113678754_113909424|GENSCAN_predicted_CDS_2|381_bp
atgagggcaaccgcccccatgattcgccgggtccctctcacaacatgggaattatgggaa
ctacaagatgaaatttggatggggacacagccaaaccatatcactcctgttgctttctta
atggatagttttcatcctggggtgattttcaagatggtggattcctttgtttcgtttcca
gcaactctggttctgaaaatggggcatgtccagatcagcaatgagtcggcaattgacttc
tacaggaagtttggctttgagattattgagacaaagaagaactactataagaggatagag
cccgcagatgctcatgtgctgcagaaaaacctcaaagttccttctggtcagaatgcagat
gtgcaaaagacagacaactga

>gi568815595f:113678754_113909424|GENSCAN_predicted_peptide_3|201_aa
MLENSETNQLPSIPAPGPQYTDCRHLTREMATVPQTTSSRVESGGGRQPNHSTWSCGPAW
LSGPLPGRRPRALHNSLSMLPHSVASPHSTTHTRLRTETLKPPGSCLRWPFSPPTARASP
PPPPGAEGTEKQRNLPPPVFALNLSSPLRLSPSTWARTLLPHRPGPARLPFLTLSSSPPA
EAVVTTDINAVVVAALRSPHP

>gi568815595f:113678754_113909424|GENSCAN_predicted_CDS_3|606_bp
atgttggaaaacagtgaaacaaatcagctgcccagcattcctgctccaggtcctcagtac
acagactgcagacatcttacccgggaaatggcaactgtgccacagaccacaagttccaga
gttgagtctggaggtggaagacaaccaaaccactccacctggagctgcgggccggcgtgg
ctcagcggtccgctcccgggaaggaggccccgggcgcttcacaatagcctttccatgttg
ccccactcggtcgcttctccccactcaacaacccacactcgtctccgaaccgaaaccctg
aagccccccgggtcttgcctccgctggcccttcagcccgccaacagcccgagcctcgcct
ccgccccctccgggagccgagggaactgagaagcagagaaatctccctccgcccgtcttc
gccctgaatctctcctcgcctttgcggctctccccctctacatgggcccggacccttcta
ccccaccggccgggccctgcccggctgcccttcctcaccctttcatcttccccgcctgct
gaggccgtcgttaccaccgatatcaacgccgtcgtagtcgccgcccttaggtctccgcac
ccttag

>gi568815595f:113678754_113909424|GENSCAN_predicted_peptide_4|605_aa
MDFSKLPKILDEDKESTFGYVHGVSGPVVTACDMAGAAMYELVRVGHSELVGEIIRLEAG
VSVGDPVLRTGKPLSVELGPGIMGAIFDGIQRPLSDISSQTQSIYIPRGVNVSALSRDIK
WDFTPCKNLRVGSHITGGDIYGIVSENSLIKHKIMLPPRNRGTVTYIAPPGNYDTSDVVL
ELEFEGVKEKFTMVQVWPVRQVRPVTEKLPANHPLLTGQRVLDALFPCVQGGTTAIPGAF
GCGKTVISQSLSKYSNSDVIIYVGCGERGNEMSEVLRDFPELTMEVDGKVESIMKRTALV
ANTSNMPVAAREASIYTGITLSEYFRDMGYHVSMMADSTSRWAEALREISGRLAEMPADS
GYPAYLGARLASFYERAGRVKCLGNPEREGSVSIVGAVSPPGGDFSDPVTSATLGIVQVF
WGLDKKLAQRKHFPSVNWLISYSKYMRALDEYYDKHFTEFVPLRTKAKEILQEEEDLAEI
VQLVGKASLAETDKITLEVAKLIKDDFLQQNGYTPYDRFCPFYKTVGMLSNMIAFYDMAR
RAVETTAQSDNKITWSIIREHMGDILYKLSSMKFKDPLKDGEAKIKSDYAQLLEDMQNAF
RSLED

>gi568815595f:113678754_113909424|GENSCAN_predicted_CDS_4|1818_bp
atggatttttccaagctacccaaaatactcgatgaagataaagaaagcacatttggttat
gtgcatggggtctcaggacctgtggttacagcctgtgacatggcgggtgcagccatgtat
gagctggtgagagtgggccacagcgaattggttggagagattattcgattggaggctggt
gtgtctgttggagatcctgtacttcgcactggtaaacccctctctgtagagcttggtcct
ggcattatgggagccatttttgatggtattcaaagacctttgtcggatatcagcagtcag
acccaaagcatctacatccccagaggagtaaacgtgtctgctcttagcagagatatcaaa
tgggactttacaccttgcaaaaacctacgggttggtagtcatatcactggcggagacatt
tatggaattgtcagtgagaactcgcttatcaaacacaaaatcatgttacccccacgaaac
agaggaactgtaacttacattgctccacctgggaattatgatacctctgatgttgtcttg
gagcttgaatttgaaggtgtaaaggagaagttcaccatggtgcaagtatggcctgtacgt
caagttcgacctgtcactgagaagctgccagccaatcatcctctgttgactggccagaga
gtccttgatgccctttttccgtgtgtccagggaggaactactgctatccctggagccttt
ggctgtggaaagacagtgatatcacagtctctatccaagtattctaacagtgatgtaatc
atctatgtaggatgtggtgaaagaggaaatgagatgtctgaagtcctccgggacttccca
gagctcacaatggaggttgatggtaaggtagagtcaattatgaagaggacagctttggta
gccaatacctccaatatgcctgttgctgctagagaagcctctatttatactggaatcaca
ctgtcagagtacttccgtgacatgggctatcatgtcagtatgatggctgactctacctct
agatgggctgaggcccttagagaaatctctggtcgtttagctgaaatgcctgcagatagt
ggatatccagcctatcttggtgcccgtctggcctcgttttatgaacgagcaggcagggtg
aaatgtcttggaaatcctgaaagagaagggagtgtcagcattgtaggagcagtttctcca
cctggtggtgatttttctgatccagttacatctgccactcttggtatcgttcaggtgttc
tggggcttagataagaaactagctcaacgtaagcatttcccctctgtcaattggctcatc
agctacagcaagtatatgcgtgccttggatgaatactatgacaaacacttcacagagttc
gttcctctgaggacgaaagctaaggaaattctgcaggaagaagaagacctggcagaaatt
gtacagcttgtgggaaaggcttctttggcagaaacagataaaatcactctggaggtagca
aaacttatcaaagatgatttcctacaacaaaatggatatactccttatgacaggttctgc
ccattctacaagacagtagggatgctgtccaacatgattgcattttatgatatggctcgt
agagctgttgaaaccactgcccagagtgacaataaaatcacatggtccattattcgtgag
cacatgggagacatcctctataaactttcctccatgaaattcaaggatccactgaaagat
ggtgaggcaaagatcaaaagcgactatgcacaacttcttgaagacatgcagaatgcattc
cgtagccttgaagattag

>gi568815595f:113678754_113909424|GENSCAN_predicted_peptide_5|247_aa
MGPDPRGPGAETSAPGHFGTKFKPSTPTGKQMSPPPPVGKGLAEAQETVSSRALRVTGSA
RLLRRPSEYFQPQLLAPSGGREGFLTMGVTGNLEQLSSSVLAHGLSEVALNQVDIQSSED
LIVAGGSTSMVSHLHGRAPGTGYWFGTSIPLHMDIFTELLQSSLHGSAFPQSRHLVSGPG
AQSLPSIAALGAVICIHGHLSTYLYATGYSTVKRQQFMHSMTVFQGQTIPQIQVSYPTKQ
AIDCKEN

>gi568815595f:113678754_113909424|GENSCAN_predicted_CDS_5|744_bp
atggggcctgacccaagggggcctggggctgagacatccgcaccaggacatttcgggacc
aaattcaagccctcaacgcccacagggaagcaaatgtccccaccaccgcccgtagggaaa
gggctcgcagaggcacaggaaaccgtttcctcgcgcgcgctgcgagttacaggctccgcg
cgcctcctccgccggccctccgagtacttccagccgcagctccttgcgccctctggcggc
cgtgaaggattcctgacgatgggtgttaccgggaacctggagcagctcagctcctcagtt
ctagctcatgggctttcagaggttgcccttaatcaagtggatatccagtcatcagaagac
ctgatagtggctggaggatccacttctatggtgtctcacttacatggccgggcacctggt
actggctattggtttgggacctcaattcctctccatatggacatcttcacagagctgctt
cagtcctcattgcatggcagtgcctttcctcagagcagacatctagtgtctggtccaggt
gctcaaagtctgccatccattgctgctttaggggctgtgatatgtattcacggacacctg
agtacgtatttgtatgcaactggctacagcactgtgaagagacaacagtttatgcattct
atgactgtgttccaaggacagactattccccaaatccaggtcagctatccaacaaagcaa
gctattgattgcaaagagaattga

>gi568815595f:113678754_113909424|GENSCAN_predicted_peptide_6|92_aa
MRASSISMIIFICPGDCAATLRCSHPETGRPWPKGLEGERPARLTKGEADRDTYRRSFVP
PGANKKVEAGAVSATEFQFKGRFGRGRGQPPQ

>gi568815595f:113678754_113909424|GENSCAN_predicted_CDS_6|279_bp
atgagggcatccagtatctccatgattatcttcatctgccccggagactgtgctgccacc
ctacgctgcagccatccagagactggcaggccttggcctaaaggtctggagggtgagcga
cctgcaagactcacaaaaggggaagccgacagagatacctacagacggagttttgtgccc
cctggtgccaacaagaaagtcgaggctggggctgtgtcagcaaccgaattccagtttaaa
ggcagatttggtcgtggacgtggtcagccacctcagtaa

>gi568815595f:113678754_113909424|GENSCAN_predicted_peptide_7|206_aa
MVRTQCLLGLRTFVAFAAKLWSFFIYLLRGQIRTVIQYQTVRYDILPLSPVSRNWLAQVV
IDKHSVRFFVRKRPHVDFFLEVVSQWYELVVFTESMEIYGFAVAGKLDNSRSILKRRYYR
QHCTLQLSSYIKDLSVVHSDLSSIVILDNSLGAYRSHPDNAIPIKSWFSDPSDTALLNLL
PMLDALRFTADVHSVLSRNLHQHRLW

>gi568815595f:113678754_113909424|GENSCAN_predicted_CDS_7|621_bp
atggtgcggacgcagtgtctgctgggactgcgcacgttcgtggccttcgctgccaagctc
tggagcttcttcatttaccttttgcgggggcagatccgcacggtaattcagtaccaaact
gttcgatatgatatcctccccttatctcctgtgtcccggaattggctagcccaggtggta
atagacaaacattctgtccggttttttgtacgtaagaggccccatgtggatttcttcctg
gaagtggtgagccagtggtacgagctggtggtgtttacagaaagcatggagatctatggc
tttgctgtggcaggtaaactggacaatagcagaagcatccttaagaggagatattacaga
cagcactgcactttgcagttgagcagctacatcaaggacctctctgtggtccacagtgac
ctctccagcattgtgatcctggataactccctaggggcttacaggagccatccagacaat
gccatccccatcaaatcctggttcagtgaccccagcgacacagcccttctcaacctgctc
ccgatgctggatgccctcaggttcaccgctgacgttcattctgtgctgagccgaaacctt
caccaacatcggctctggtga

>gi568815595f:113678754_113909424|GENSCAN_predicted_peptide_8|130_aa
XLRTRFKKQLSNDHMAKTIINVLGSAFPFSRSKKKGKPIKYNGSTTDLISNAQQDGGEMW
KNREERRRKKEGEIANKEEEDGRTEEIKVGLNVAFIRLIALLENFWNSSNSKIKEQGDLI
MLRRLKEKAG

>gi568815595f:113678754_113909424|GENSCAN_predicted_CDS_8|393_bp
nccctaagaacaaggtttaagaaacagctgtcaaatgatcatatggccaagactataata
aatgtcctgggatctgctttccctttctcaaggagcaaaaagaaaggaaaacctattaaa
tacaatgggagcacaactgatctaatttccaatgctcaacaggatggaggtgagatgtgg
aaaaacagagaggaaaggaggaggaagaaggaaggagagattgcaaataaagaggaagaa
gatggaagaaccgaggaaataaaggtaggtctgaatgttgcatttattagattgatagca
ctactggaaaacttttggaattccagtaactccaaaataaaagaacaaggggatttgata
atgttgcgcaggctaaaggagaaagctggatga