Result of FASTA (ccds) for pF1KB5095
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB5095, 974 aa
  1>>>pF1KB5095 974 - 974 aa - 974 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.8647+/-0.000883; mu= 18.8292+/- 0.053
 mean_var=78.6881+/-15.524, 0's: 0 Z-trim(106.8): 18  B-trim: 24 in 1/48
 Lambda= 0.144584
 statistics sampled from 9195 (9213) to 9195 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.64), E-opt: 0.2 (0.283), width:  16
 Scan time:  4.400

The best scores are:                                      opt bits E(32554)
CCDS43348.1 PAM gene_id:5066|Hs108|chr5            ( 974) 6619 1390.8       0
CCDS54885.1 PAM gene_id:5066|Hs108|chr5            ( 973) 6602 1387.3       0
CCDS4092.1 PAM gene_id:5066|Hs108|chr5             ( 905) 5711 1201.4       0
CCDS4094.1 PAM gene_id:5066|Hs108|chr5             ( 887) 5695 1198.1       0
CCDS4093.1 PAM gene_id:5066|Hs108|chr5             ( 866) 3218 681.4 2.1e-195


>>CCDS43348.1 PAM gene_id:5066|Hs108|chr5                 (974 aa)
 initn: 6619 init1: 6619 opt: 6619  Z-score: 7454.8  bits: 1390.8 E(32554):    0
Smith-Waterman score: 6619; 100.0% identity (100.0% similar) in 974 aa overlap (1-974:1-974)

               10        20        30        40        50        60
pF1KB5 MAGRVPSLLVLLVFPSSCLAFRSPLSVFKRFKETTRPFSNECLGTTRPVVPIDSSDFALD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 MAGRVPSLLVLLVFPSSCLAFRSPLSVFKRFKETTRPFSNECLGTTRPVVPIDSSDFALD
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 IRMPGVTPKQSDTYFCMSMRIPVDEEAFVIDFKPRASMDTVHHMLLFGCNMPSSTGSYWF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 IRMPGVTPKQSDTYFCMSMRIPVDEEAFVIDFKPRASMDTVHHMLLFGCNMPSSTGSYWF
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB5 CDEGTCTDKANILYAWARNAPPTRLPKGVGFRVGGETGSKYFVLQVHYGDISAFRDNNKD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 CDEGTCTDKANILYAWARNAPPTRLPKGVGFRVGGETGSKYFVLQVHYGDISAFRDNNKD
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB5 CSGVSLHLTRLPQPLIAGMYLMMSVDTVIPAGEKVVNSDISCHYKNYPMHVFAYRVHTHH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 CSGVSLHLTRLPQPLIAGMYLMMSVDTVIPAGEKVVNSDISCHYKNYPMHVFAYRVHTHH
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB5 LGKVVSGYRVRNGQWTLIGRQSPQLPQAFYPVGHPVDVSFGDLLAARCVFTGEGRTEATH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 LGKVVSGYRVRNGQWTLIGRQSPQLPQAFYPVGHPVDVSFGDLLAARCVFTGEGRTEATH
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB5 IGGTSSDEMCNLYIMYYMEAKHAVSFMTCTQNVAPDMFRTIPPEANIPIPVKSDMVMMHE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 IGGTSSDEMCNLYIMYYMEAKHAVSFMTCTQNVAPDMFRTIPPEANIPIPVKSDMVMMHE
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB5 HHKETEYKDKIPLLQQPKREEEEVLDQGDFYSLLSKLLGEREDVVHVHKYNPTEKAESES
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 HHKETEYKDKIPLLQQPKREEEEVLDQGDFYSLLSKLLGEREDVVHVHKYNPTEKAESES
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KB5 DLVAEIANVVQKKDLGRSDAREGAEHERGNAILVRDRIHKFHRLVSTLRPPESRVFSLQQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 DLVAEIANVVQKKDLGRSDAREGAEHERGNAILVRDRIHKFHRLVSTLRPPESRVFSLQQ
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KB5 PPPGEGTWEPEHTGDFHMEEALDWPGVYLLPGQVSGVALDPKNNLVIFHRGDHVWDGNSF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 PPPGEGTWEPEHTGDFHMEEALDWPGVYLLPGQVSGVALDPKNNLVIFHRGDHVWDGNSF
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KB5 DSKFVYQQIGLGPIEEDTILVIDPNNAAVLQSSGKNLFYLPHGLSIDKDGNYWVTDVALH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 DSKFVYQQIGLGPIEEDTILVIDPNNAAVLQSSGKNLFYLPHGLSIDKDGNYWVTDVALH
              550       560       570       580       590       600

              610       620       630       640       650       660
pF1KB5 QVFKLDPNNKEGPVLILGRSMQPGSDQNHFCQPTDVAVDPGTGAIYVSDGYCNSRIVQFS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 QVFKLDPNNKEGPVLILGRSMQPGSDQNHFCQPTDVAVDPGTGAIYVSDGYCNSRIVQFS
              610       620       630       640       650       660

              670       680       690       700       710       720
pF1KB5 PSGKFITQWGEESSGSSPLPGQFTVPHSLALVPLLGQLCVADRENGRIQCFKTDTKEFVR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 PSGKFITQWGEESSGSSPLPGQFTVPHSLALVPLLGQLCVADRENGRIQCFKTDTKEFVR
              670       680       690       700       710       720

              730       740       750       760       770       780
pF1KB5 EIKHSSFGRNVFAISYIPGLLFAVNGKPHFGDQEPVQGFVMNFSNGEIIDIFKPVRKHFD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 EIKHSSFGRNVFAISYIPGLLFAVNGKPHFGDQEPVQGFVMNFSNGEIIDIFKPVRKHFD
              730       740       750       760       770       780

              790       800       810       820       830       840
pF1KB5 MPHDIVASEDGTVYIGDAHTNTVWKFTLTEKLEHRSVKKAGIEVQEIKEAEAVVETKMEN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 MPHDIVASEDGTVYIGDAHTNTVWKFTLTEKLEHRSVKKAGIEVQEIKEAEAVVETKMEN
              790       800       810       820       830       840

              850       860       870       880       890       900
pF1KB5 KPTSSELQKMQEKQKLIKEPGSGVPVVLITTLLVIPVVVLLAIAIFIRWKKSRAFGADSE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 KPTSSELQKMQEKQKLIKEPGSGVPVVLITTLLVIPVVVLLAIAIFIRWKKSRAFGADSE
              850       860       870       880       890       900

              910       920       930       940       950       960
pF1KB5 HKLETSSGRVLGRFRGKGSGGLNLGNFFASRKGYSRKGFDRLSTEGSDQEKEDDGSESEE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 HKLETSSGRVLGRFRGKGSGGLNLGNFFASRKGYSRKGFDRLSTEGSDQEKEDDGSESEE
              910       920       930       940       950       960

              970    
pF1KB5 EYSAPLPALAPSSS
       ::::::::::::::
CCDS43 EYSAPLPALAPSSS
              970    

>>CCDS54885.1 PAM gene_id:5066|Hs108|chr5                 (973 aa)
 initn: 6111 init1: 6111 opt: 6602  Z-score: 7435.7  bits: 1387.3 E(32554):    0
Smith-Waterman score: 6602; 99.9% identity (99.9% similar) in 974 aa overlap (1-974:1-973)

               10        20        30        40        50        60
pF1KB5 MAGRVPSLLVLLVFPSSCLAFRSPLSVFKRFKETTRPFSNECLGTTRPVVPIDSSDFALD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 MAGRVPSLLVLLVFPSSCLAFRSPLSVFKRFKETTRPFSNECLGTTRPVVPIDSSDFALD
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 IRMPGVTPKQSDTYFCMSMRIPVDEEAFVIDFKPRASMDTVHHMLLFGCNMPSSTGSYWF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 IRMPGVTPKQSDTYFCMSMRIPVDEEAFVIDFKPRASMDTVHHMLLFGCNMPSSTGSYWF
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB5 CDEGTCTDKANILYAWARNAPPTRLPKGVGFRVGGETGSKYFVLQVHYGDISAFRDNNKD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 CDEGTCTDKANILYAWARNAPPTRLPKGVGFRVGGETGSKYFVLQVHYGDISAFRDNNKD
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB5 CSGVSLHLTRLPQPLIAGMYLMMSVDTVIPAGEKVVNSDISCHYKNYPMHVFAYRVHTHH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 CSGVSLHLTRLPQPLIAGMYLMMSVDTVIPAGEKVVNSDISCHYKNYPMHVFAYRVHTHH
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB5 LGKVVSGYRVRNGQWTLIGRQSPQLPQAFYPVGHPVDVSFGDLLAARCVFTGEGRTEATH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 LGKVVSGYRVRNGQWTLIGRQSPQLPQAFYPVGHPVDVSFGDLLAARCVFTGEGRTEATH
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB5 IGGTSSDEMCNLYIMYYMEAKHAVSFMTCTQNVAPDMFRTIPPEANIPIPVKSDMVMMHE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 IGGTSSDEMCNLYIMYYMEAKHAVSFMTCTQNVAPDMFRTIPPEANIPIPVKSDMVMMHE
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB5 HHKETEYKDKIPLLQQPKREEEEVLDQGDFYSLLSKLLGEREDVVHVHKYNPTEKAESES
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 HHKETEYKDKIPLLQQPKREEEEVLDQGDFYSLLSKLLGEREDVVHVHKYNPTEKAESES
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KB5 DLVAEIANVVQKKDLGRSDAREGAEHERGNAILVRDRIHKFHRLVSTLRPPESRVFSLQQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 DLVAEIANVVQKKDLGRSDAREGAEHERGNAILVRDRIHKFHRLVSTLRPPESRVFSLQQ
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KB5 PPPGEGTWEPEHTGDFHMEEALDWPGVYLLPGQVSGVALDPKNNLVIFHRGDHVWDGNSF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 PPPGEGTWEPEHTGDFHMEEALDWPGVYLLPGQVSGVALDPKNNLVIFHRGDHVWDGNSF
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KB5 DSKFVYQQIGLGPIEEDTILVIDPNNAAVLQSSGKNLFYLPHGLSIDKDGNYWVTDVALH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 DSKFVYQQIGLGPIEEDTILVIDPNNAAVLQSSGKNLFYLPHGLSIDKDGNYWVTDVALH
              550       560       570       580       590       600

              610       620       630       640       650       660
pF1KB5 QVFKLDPNNKEGPVLILGRSMQPGSDQNHFCQPTDVAVDPGTGAIYVSDGYCNSRIVQFS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 QVFKLDPNNKEGPVLILGRSMQPGSDQNHFCQPTDVAVDPGTGAIYVSDGYCNSRIVQFS
              610       620       630       640       650       660

              670       680       690       700       710       720
pF1KB5 PSGKFITQWGEESSGSSPLPGQFTVPHSLALVPLLGQLCVADRENGRIQCFKTDTKEFVR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 PSGKFITQWGEESSGSSPLPGQFTVPHSLALVPLLGQLCVADRENGRIQCFKTDTKEFVR
              670       680       690       700       710       720

              730       740       750       760       770       780
pF1KB5 EIKHSSFGRNVFAISYIPGLLFAVNGKPHFGDQEPVQGFVMNFSNGEIIDIFKPVRKHFD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 EIKHSSFGRNVFAISYIPGLLFAVNGKPHFGDQEPVQGFVMNFSNGEIIDIFKPVRKHFD
              730       740       750       760       770       780

              790       800       810       820       830       840
pF1KB5 MPHDIVASEDGTVYIGDAHTNTVWKFTLTEKLEHRSVKKAGIEVQEIKEAEAVVETKMEN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 MPHDIVASEDGTVYIGDAHTNTVWKFTLTEKLEHRSVKKAGIEVQEIKEAEAVVETKMEN
              790       800       810       820       830       840

              850       860       870       880       890       900
pF1KB5 KPTSSELQKMQEKQKLIKEPGSGVPVVLITTLLVIPVVVLLAIAIFIRWKKSRAFGADSE
       :::::::::::::::::::::::::::::::::::::::::::::::::::::::: :::
CCDS54 KPTSSELQKMQEKQKLIKEPGSGVPVVLITTLLVIPVVVLLAIAIFIRWKKSRAFG-DSE
              850       860       870       880       890          

              910       920       930       940       950       960
pF1KB5 HKLETSSGRVLGRFRGKGSGGLNLGNFFASRKGYSRKGFDRLSTEGSDQEKEDDGSESEE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 HKLETSSGRVLGRFRGKGSGGLNLGNFFASRKGYSRKGFDRLSTEGSDQEKEDDGSESEE
     900       910       920       930       940       950         

              970    
pF1KB5 EYSAPLPALAPSSS
       ::::::::::::::
CCDS54 EYSAPLPALAPSSS
     960       970   

>>CCDS4092.1 PAM gene_id:5066|Hs108|chr5                  (905 aa)
 initn: 5711 init1: 5711 opt: 5711  Z-score: 6431.7  bits: 1201.4 E(32554):    0
Smith-Waterman score: 6050; 92.9% identity (92.9% similar) in 974 aa overlap (1-974:1-905)

               10        20        30        40        50        60
pF1KB5 MAGRVPSLLVLLVFPSSCLAFRSPLSVFKRFKETTRPFSNECLGTTRPVVPIDSSDFALD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS40 MAGRVPSLLVLLVFPSSCLAFRSPLSVFKRFKETTRPFSNECLGTTRPVVPIDSSDFALD
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 IRMPGVTPKQSDTYFCMSMRIPVDEEAFVIDFKPRASMDTVHHMLLFGCNMPSSTGSYWF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS40 IRMPGVTPKQSDTYFCMSMRIPVDEEAFVIDFKPRASMDTVHHMLLFGCNMPSSTGSYWF
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB5 CDEGTCTDKANILYAWARNAPPTRLPKGVGFRVGGETGSKYFVLQVHYGDISAFRDNNKD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS40 CDEGTCTDKANILYAWARNAPPTRLPKGVGFRVGGETGSKYFVLQVHYGDISAFRDNNKD
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB5 CSGVSLHLTRLPQPLIAGMYLMMSVDTVIPAGEKVVNSDISCHYKNYPMHVFAYRVHTHH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS40 CSGVSLHLTRLPQPLIAGMYLMMSVDTVIPAGEKVVNSDISCHYKNYPMHVFAYRVHTHH
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB5 LGKVVSGYRVRNGQWTLIGRQSPQLPQAFYPVGHPVDVSFGDLLAARCVFTGEGRTEATH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS40 LGKVVSGYRVRNGQWTLIGRQSPQLPQAFYPVGHPVDVSFGDLLAARCVFTGEGRTEATH
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB5 IGGTSSDEMCNLYIMYYMEAKHAVSFMTCTQNVAPDMFRTIPPEANIPIPVKSDMVMMHE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS40 IGGTSSDEMCNLYIMYYMEAKHAVSFMTCTQNVAPDMFRTIPPEANIPIPVKSDMVMMHE
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB5 HHKETEYKDKIPLLQQPKREEEEVLDQGDFYSLLSKLLGEREDVVHVHKYNPTEKAESES
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS40 HHKETEYKDKIPLLQQPKREEEEVLDQGDFYSLLSKLLGEREDVVHVHKYNPTEKAESES
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KB5 DLVAEIANVVQKKDLGRSDAREGAEHERGNAILVRDRIHKFHRLVSTLRPPESRVFSLQQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS40 DLVAEIANVVQKKDLGRSDAREGAEHERGNAILVRDRIHKFHRLVSTLRPPESRVFSLQQ
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KB5 PPPGEGTWEPEHTGDFHMEEALDWPGVYLLPGQVSGVALDPKNNLVIFHRGDHVWDGNSF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS40 PPPGEGTWEPEHTGDFHMEEALDWPGVYLLPGQVSGVALDPKNNLVIFHRGDHVWDGNSF
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KB5 DSKFVYQQIGLGPIEEDTILVIDPNNAAVLQSSGKNLFYLPHGLSIDKDGNYWVTDVALH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS40 DSKFVYQQIGLGPIEEDTILVIDPNNAAVLQSSGKNLFYLPHGLSIDKDGNYWVTDVALH
              550       560       570       580       590       600

              610       620       630       640       650       660
pF1KB5 QVFKLDPNNKEGPVLILGRSMQPGSDQNHFCQPTDVAVDPGTGAIYVSDGYCNSRIVQFS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS40 QVFKLDPNNKEGPVLILGRSMQPGSDQNHFCQPTDVAVDPGTGAIYVSDGYCNSRIVQFS
              610       620       630       640       650       660

              670       680       690       700       710       720
pF1KB5 PSGKFITQWGEESSGSSPLPGQFTVPHSLALVPLLGQLCVADRENGRIQCFKTDTKEFVR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS40 PSGKFITQWGEESSGSSPLPGQFTVPHSLALVPLLGQLCVADRENGRIQCFKTDTKEFVR
              670       680       690       700       710       720

              730       740       750       760       770       780
pF1KB5 EIKHSSFGRNVFAISYIPGLLFAVNGKPHFGDQEPVQGFVMNFSNGEIIDIFKPVRKHFD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS40 EIKHSSFGRNVFAISYIPGLLFAVNGKPHFGDQEPVQGFVMNFSNGEIIDIFKPVRKHFD
              730       740       750       760       770       780

              790       800       810       820       830       840
pF1KB5 MPHDIVASEDGTVYIGDAHTNTVWKFTLTEKLEHRSVKKAGIEVQEIKEAEAVVETKMEN
       ::::::::::::::::::::::::::::::::::::::::::::::::            
CCDS40 MPHDIVASEDGTVYIGDAHTNTVWKFTLTEKLEHRSVKKAGIEVQEIK------------
              790       800       810       820                    

              850       860       870       880       890       900
pF1KB5 KPTSSELQKMQEKQKLIKEPGSGVPVVLITTLLVIPVVVLLAIAIFIRWKKSRAFGADSE
                                                                :::
CCDS40 ---------------------------------------------------------DSE
                                                               830 

              910       920       930       940       950       960
pF1KB5 HKLETSSGRVLGRFRGKGSGGLNLGNFFASRKGYSRKGFDRLSTEGSDQEKEDDGSESEE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS40 HKLETSSGRVLGRFRGKGSGGLNLGNFFASRKGYSRKGFDRLSTEGSDQEKEDDGSESEE
             840       850       860       870       880       890 

              970    
pF1KB5 EYSAPLPALAPSSS
       ::::::::::::::
CCDS40 EYSAPLPALAPSSS
             900     

>>CCDS4094.1 PAM gene_id:5066|Hs108|chr5                  (887 aa)
 initn: 5695 init1: 5695 opt: 5695  Z-score: 6413.8  bits: 1198.1 E(32554):    0
Smith-Waterman score: 5898; 91.1% identity (91.1% similar) in 974 aa overlap (1-974:1-887)

               10        20        30        40        50        60
pF1KB5 MAGRVPSLLVLLVFPSSCLAFRSPLSVFKRFKETTRPFSNECLGTTRPVVPIDSSDFALD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS40 MAGRVPSLLVLLVFPSSCLAFRSPLSVFKRFKETTRPFSNECLGTTRPVVPIDSSDFALD
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 IRMPGVTPKQSDTYFCMSMRIPVDEEAFVIDFKPRASMDTVHHMLLFGCNMPSSTGSYWF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS40 IRMPGVTPKQSDTYFCMSMRIPVDEEAFVIDFKPRASMDTVHHMLLFGCNMPSSTGSYWF
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB5 CDEGTCTDKANILYAWARNAPPTRLPKGVGFRVGGETGSKYFVLQVHYGDISAFRDNNKD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS40 CDEGTCTDKANILYAWARNAPPTRLPKGVGFRVGGETGSKYFVLQVHYGDISAFRDNNKD
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB5 CSGVSLHLTRLPQPLIAGMYLMMSVDTVIPAGEKVVNSDISCHYKNYPMHVFAYRVHTHH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS40 CSGVSLHLTRLPQPLIAGMYLMMSVDTVIPAGEKVVNSDISCHYKNYPMHVFAYRVHTHH
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB5 LGKVVSGYRVRNGQWTLIGRQSPQLPQAFYPVGHPVDVSFGDLLAARCVFTGEGRTEATH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS40 LGKVVSGYRVRNGQWTLIGRQSPQLPQAFYPVGHPVDVSFGDLLAARCVFTGEGRTEATH
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB5 IGGTSSDEMCNLYIMYYMEAKHAVSFMTCTQNVAPDMFRTIPPEANIPIPVKSDMVMMHE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS40 IGGTSSDEMCNLYIMYYMEAKHAVSFMTCTQNVAPDMFRTIPPEANIPIPVKSDMVMMHE
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB5 HHKETEYKDKIPLLQQPKREEEEVLDQGDFYSLLSKLLGEREDVVHVHKYNPTEKAESES
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS40 HHKETEYKDKIPLLQQPKREEEEVLDQGDFYSLLSKLLGEREDVVHVHKYNPTEKAESES
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KB5 DLVAEIANVVQKKDLGRSDAREGAEHERGNAILVRDRIHKFHRLVSTLRPPESRVFSLQQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS40 DLVAEIANVVQKKDLGRSDAREGAEHERGNAILVRDRIHKFHRLVSTLRPPESRVFSLQQ
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KB5 PPPGEGTWEPEHTGDFHMEEALDWPGVYLLPGQVSGVALDPKNNLVIFHRGDHVWDGNSF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS40 PPPGEGTWEPEHTGDFHMEEALDWPGVYLLPGQVSGVALDPKNNLVIFHRGDHVWDGNSF
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KB5 DSKFVYQQIGLGPIEEDTILVIDPNNAAVLQSSGKNLFYLPHGLSIDKDGNYWVTDVALH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS40 DSKFVYQQIGLGPIEEDTILVIDPNNAAVLQSSGKNLFYLPHGLSIDKDGNYWVTDVALH
              550       560       570       580       590       600

              610       620       630       640       650       660
pF1KB5 QVFKLDPNNKEGPVLILGRSMQPGSDQNHFCQPTDVAVDPGTGAIYVSDGYCNSRIVQFS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS40 QVFKLDPNNKEGPVLILGRSMQPGSDQNHFCQPTDVAVDPGTGAIYVSDGYCNSRIVQFS
              610       620       630       640       650       660

              670       680       690       700       710       720
pF1KB5 PSGKFITQWGEESSGSSPLPGQFTVPHSLALVPLLGQLCVADRENGRIQCFKTDTKEFVR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS40 PSGKFITQWGEESSGSSPLPGQFTVPHSLALVPLLGQLCVADRENGRIQCFKTDTKEFVR
              670       680       690       700       710       720

              730       740       750       760       770       780
pF1KB5 EIKHSSFGRNVFAISYIPGLLFAVNGKPHFGDQEPVQGFVMNFSNGEIIDIFKPVRKHFD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS40 EIKHSSFGRNVFAISYIPGLLFAVNGKPHFGDQEPVQGFVMNFSNGEIIDIFKPVRKHFD
              730       740       750       760       770       780

              790       800       810       820       830       840
pF1KB5 MPHDIVASEDGTVYIGDAHTNTVWKFTLTEKLEHRSVKKAGIEVQEIKEAEAVVETKMEN
       ::::::::::::::::::::::::::::::::::::::::::::::::            
CCDS40 MPHDIVASEDGTVYIGDAHTNTVWKFTLTEKLEHRSVKKAGIEVQEIK------------
              790       800       810       820                    

              850       860       870       880       890       900
pF1KB5 KPTSSELQKMQEKQKLIKEPGSGVPVVLITTLLVIPVVVLLAIAIFIRWKKSRAFGADSE
                                                                   
CCDS40 ------------------------------------------------------------
                                                                   

              910       920       930       940       950       960
pF1KB5 HKLETSSGRVLGRFRGKGSGGLNLGNFFASRKGYSRKGFDRLSTEGSDQEKEDDGSESEE
                      :::::::::::::::::::::::::::::::::::::::::::::
CCDS40 ---------------GKGSGGLNLGNFFASRKGYSRKGFDRLSTEGSDQEKEDDGSESEE
                     830       840       850       860       870   

              970    
pF1KB5 EYSAPLPALAPSSS
       ::::::::::::::
CCDS40 EYSAPLPALAPSSS
           880       

>>CCDS4093.1 PAM gene_id:5066|Hs108|chr5                  (866 aa)
 initn: 5381 init1: 2717 opt: 3218  Z-score: 3621.6  bits: 681.4 E(32554): 2.1e-195
Smith-Waterman score: 5662; 88.9% identity (88.9% similar) in 974 aa overlap (1-974:1-866)

               10        20        30        40        50        60
pF1KB5 MAGRVPSLLVLLVFPSSCLAFRSPLSVFKRFKETTRPFSNECLGTTRPVVPIDSSDFALD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS40 MAGRVPSLLVLLVFPSSCLAFRSPLSVFKRFKETTRPFSNECLGTTRPVVPIDSSDFALD
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 IRMPGVTPKQSDTYFCMSMRIPVDEEAFVIDFKPRASMDTVHHMLLFGCNMPSSTGSYWF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS40 IRMPGVTPKQSDTYFCMSMRIPVDEEAFVIDFKPRASMDTVHHMLLFGCNMPSSTGSYWF
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB5 CDEGTCTDKANILYAWARNAPPTRLPKGVGFRVGGETGSKYFVLQVHYGDISAFRDNNKD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS40 CDEGTCTDKANILYAWARNAPPTRLPKGVGFRVGGETGSKYFVLQVHYGDISAFRDNNKD
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB5 CSGVSLHLTRLPQPLIAGMYLMMSVDTVIPAGEKVVNSDISCHYKNYPMHVFAYRVHTHH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS40 CSGVSLHLTRLPQPLIAGMYLMMSVDTVIPAGEKVVNSDISCHYKNYPMHVFAYRVHTHH
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB5 LGKVVSGYRVRNGQWTLIGRQSPQLPQAFYPVGHPVDVSFGDLLAARCVFTGEGRTEATH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS40 LGKVVSGYRVRNGQWTLIGRQSPQLPQAFYPVGHPVDVSFGDLLAARCVFTGEGRTEATH
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB5 IGGTSSDEMCNLYIMYYMEAKHAVSFMTCTQNVAPDMFRTIPPEANIPIPVKSDMVMMHE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS40 IGGTSSDEMCNLYIMYYMEAKHAVSFMTCTQNVAPDMFRTIPPEANIPIPVKSDMVMMHE
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB5 HHKETEYKDKIPLLQQPKREEEEVLDQGDFYSLLSKLLGEREDVVHVHKYNPTEKAESES
       :::::::::::::::::::::::::::                                 
CCDS40 HHKETEYKDKIPLLQQPKREEEEVLDQ---------------------------------
              370       380                                        

              430       440       450       460       470       480
pF1KB5 DLVAEIANVVQKKDLGRSDAREGAEHERGNAILVRDRIHKFHRLVSTLRPPESRVFSLQQ
                                                                   
CCDS40 ------------------------------------------------------------
                                                                   

              490       500       510       520       530       540
pF1KB5 PPPGEGTWEPEHTGDFHMEEALDWPGVYLLPGQVSGVALDPKNNLVIFHRGDHVWDGNSF
                     ::::::::::::::::::::::::::::::::::::::::::::::
CCDS40 --------------DFHMEEALDWPGVYLLPGQVSGVALDPKNNLVIFHRGDHVWDGNSF
                     390       400       410       420       430   

              550       560       570       580       590       600
pF1KB5 DSKFVYQQIGLGPIEEDTILVIDPNNAAVLQSSGKNLFYLPHGLSIDKDGNYWVTDVALH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS40 DSKFVYQQIGLGPIEEDTILVIDPNNAAVLQSSGKNLFYLPHGLSIDKDGNYWVTDVALH
           440       450       460       470       480       490   

              610       620       630       640       650       660
pF1KB5 QVFKLDPNNKEGPVLILGRSMQPGSDQNHFCQPTDVAVDPGTGAIYVSDGYCNSRIVQFS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS40 QVFKLDPNNKEGPVLILGRSMQPGSDQNHFCQPTDVAVDPGTGAIYVSDGYCNSRIVQFS
           500       510       520       530       540       550   

              670       680       690       700       710       720
pF1KB5 PSGKFITQWGEESSGSSPLPGQFTVPHSLALVPLLGQLCVADRENGRIQCFKTDTKEFVR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS40 PSGKFITQWGEESSGSSPLPGQFTVPHSLALVPLLGQLCVADRENGRIQCFKTDTKEFVR
           560       570       580       590       600       610   

              730       740       750       760       770       780
pF1KB5 EIKHSSFGRNVFAISYIPGLLFAVNGKPHFGDQEPVQGFVMNFSNGEIIDIFKPVRKHFD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS40 EIKHSSFGRNVFAISYIPGLLFAVNGKPHFGDQEPVQGFVMNFSNGEIIDIFKPVRKHFD
           620       630       640       650       660       670   

              790       800       810       820       830       840
pF1KB5 MPHDIVASEDGTVYIGDAHTNTVWKFTLTEKLEHRSVKKAGIEVQEIKEAEAVVETKMEN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS40 MPHDIVASEDGTVYIGDAHTNTVWKFTLTEKLEHRSVKKAGIEVQEIKEAEAVVETKMEN
           680       690       700       710       720       730   

              850       860       870       880       890       900
pF1KB5 KPTSSELQKMQEKQKLIKEPGSGVPVVLITTLLVIPVVVLLAIAIFIRWKKSRAFGADSE
       :::::::::::::::::::::::::::::::::::::::::::::::::::::::: :::
CCDS40 KPTSSELQKMQEKQKLIKEPGSGVPVVLITTLLVIPVVVLLAIAIFIRWKKSRAFG-DSE
           740       750       760       770       780        790  

              910       920       930       940       950       960
pF1KB5 HKLETSSGRVLGRFRGKGSGGLNLGNFFASRKGYSRKGFDRLSTEGSDQEKEDDGSESEE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS40 HKLETSSGRVLGRFRGKGSGGLNLGNFFASRKGYSRKGFDRLSTEGSDQEKEDDGSESEE
            800       810       820       830       840       850  

              970    
pF1KB5 EYSAPLPALAPSSS
       ::::::::::::::
CCDS40 EYSAPLPALAPSSS
            860      




974 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sat Nov  5 07:14:58 2016 done: Sat Nov  5 07:14:59 2016
 Total Scan time:  4.400 Total Display time:  0.220

Function used was FASTA [36.3.4 Apr, 2011]
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