GENSCAN 1.0	Date run:  5-Nov-116	Time: 07:01:06

Sequence gi568815594r:89147783_89350110 : 202328 bp : 38.35% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Sngl +    425   1108  684  1  0   88   47   249 0.810  16.74
 1.02 PlyA +   2076   2081    6                               1.05

 2.00 Prom +   9738   9777   40                              -5.75
 2.01 Init +  27102  27265  164  2  2   50   54   128 0.088   4.85
 2.02 Intr +  27452  27513   62  2  2   73   50    66 0.057  -1.24
 2.03 Intr +  27939  28120  182  1  2   61   74    72 0.021   1.77
 2.04 Term +  38336  38401   66  1  0   92   39   102 0.057   2.66
 2.05 PlyA +  38476  38481    6                               1.05

 3.02 PlyA -  38582  38577    6                              -0.45
 3.01 Sngl -  39668  39333  336  2  0   71   44   166 0.894   6.28
 3.00 Prom -  51496  51457   40                              -3.85

 4.00 Prom +  54020  54059   40                              -3.75
 4.01 Sngl +  64960  65232  273  0  0   96   41   135 0.837   4.68
 4.02 PlyA +  66037  66042    6                               1.05

 5.00 Prom +  70266  70305   40                              -4.65
 5.01 Init +  71972  72065   94  1  1   62   97    67 0.669   5.59
 5.02 Intr +  87138  87244  107  1  2  110   37    12 0.135  -2.69
 5.03 Intr +  90481  90510   30  0  0  117   83    34 0.338   3.21
 5.04 Term +  95627  95731  105  1  0   72   38    94 0.170   0.23
 5.05 PlyA +  95998  96003    6                               1.05

 6.02 PlyA -  96514  96509    6                               1.05
 6.01 Sngl - 102328  99998 2331  1  0   40   48  2115 0.816 195.15
 6.00 Prom - 107624 107585   40                              -7.35

 7.00 Prom + 113142 113181   40                              -3.85
 7.01 Init + 114728 114816   89  1  2   86   60   118 0.995   8.96
 7.02 Intr + 116517 116630  114  0  0  114   74    69 0.122   6.74
 7.03 Term + 141906 142035  130  0  1  107   44    60 0.008   0.17
 7.04 PlyA + 142997 143002    6                               1.05

 8.10 PlyA - 143739 143734    6                               1.05
 8.09 Term - 145594 145469  126  1  0   76   42    86 0.690   0.10
 8.08 Intr - 145825 145669  157  0  1   50   78   126 0.502   6.89
 8.07 Intr - 155658 155520  139  1  1   86   56    19 0.201  -2.90
 8.06 Intr - 159148 158917  232  1  1   57   64   170 0.058   7.92
 8.05 Intr - 159675 159604   72  0  0   91   94    14 0.025   0.98
 8.04 Intr - 165593 165494  100  1  1  104   11    38 0.011  -3.11
 8.03 Intr - 173155 172990  166  2  1   57   84   100 0.181   4.60
 8.02 Intr - 200575 200493   83  0  2   55  100    58 0.291   2.06
 8.01 Init - 201806 201388  419  2  2   71   53   179 0.398   8.65

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term + 116517 116634  118  0  1  114   48    74 0.869   3.03


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815594r:89147783_89350110|GENSCAN_predicted_peptide_1|227_aa
MSSSSGLQNWHPSPRLQAYPSLKVDFTGDPPPSTQEHVCLPSHPWGPGCWHQGATAGQCP
AILSAPSASLPMFLHAQSLKRTEASGGWHVSTALNVCTPIWAVTTSRLGPNPTWRCPRSA
GIPGFANGLQLLAGRRGGGQLQLCRAWLLLILSFQEHRYAQLQLQLGQLQLHWGSSLSAN
LEEAGPLLVPGSHQDLWSMAPSRNPFQPGMGRQVLTGPELVSGAGQC

>gi568815594r:89147783_89350110|GENSCAN_predicted_CDS_1|684_bp
atgagttcctcctctggtctgcagaactggcatcccagccccaggcttcaggcctatcct
agcctgaaggtagacttcactggggacccacctccttccacccaggagcatgtctgtctc
cccagtcatccatggggcccaggctgctggcaccaaggggcaactgcaggccagtgccca
gccatcctcagtgccccctcagcttcccttcccatgttcctacatgcccaaagtctgaag
aggactgaggcatcagggggctggcatgtcagcactgccctgaacgtgtgcacacccatc
tgggctgtgacaacatccaggcttggccccaaccctacttggagatgcccaaggagtgcg
ggtatccctgggtttgccaatgggctgcagctgcttgcagggaggcggggtggggggcag
ctgcagctatgcagggcttggctcctgcttattctcagcttccaagagcacaggtatgcc
caattgcagctgcagcttgggcagctgcagttgcactgggggagctccctctctgccaac
ttggaagaggcagggcccctgcttgtccccgggtcccaccaagatctatggagcatggca
cctagccgcaacccctttcagcctgggatggggcgccaggtcctcactgggcctgagctg
gtatctggggcagggcaatgttga

>gi568815594r:89147783_89350110|GENSCAN_predicted_peptide_2|157_aa
MTFRGHSTGKGKKASDGPEYNFLNTLAVSPPKLRRALRMRAAHSKGRIMGKRRKIQILLR
RQELRLLQTSMDSPPGLETSPHREKEQVASHTYYPHLVKNPGSRYRRTWQMAQKGFGIGS
QQAQNHKGYTEEVETQPTQCEDNKDEDLYDGPLLLNE

>gi568815594r:89147783_89350110|GENSCAN_predicted_CDS_2|474_bp
atgaccttccggggccactctactggaaaagggaagaaagcctcagatgggcctgagtac
aacttcctgaacacactggcagtctcacctcccaagctaaggagggcactgcgcatgcgg
gcagcccactctaagggaagaatcatgggaaagaggcgcaaaattcaaattcttctgaga
aggcaagaactgaggttgctgcagaccagtatggattcgccccccggattagaaacatct
ccacacagagaaaaggaacaggtggcttcccatacctactatccccacctagtcaagaac
cctgggtcaaggtacagaagaacatggcagatggcccagaaaggatttggaatagggagc
caacaagctcagaatcacaaaggatacacagaggaagtagagactcagcctactcaatgt
gaagacaacaaggatgaagacctttatgatggtccacttctacttaatgaatag

>gi568815594r:89147783_89350110|GENSCAN_predicted_peptide_3|111_aa
MGKDFMTKISKAIATKAKTDKWDLIKLKSFCTARVTIIRVNRQPTEWEKIFAIYPSDKGL
ISRIYKERKQIYKKKTNNPIKKWMKDMNRHLSKEDIYAANEHEKKLIITGH

>gi568815594r:89147783_89350110|GENSCAN_predicted_CDS_3|336_bp
atgggcaaagacttcatgactaaaatatcaaaagcaattgcaacgaaagccaaaactgac
aaatgggatctaattaaactaaagagcttctgcactgcaagagtaactatcatcagagtg
aacaggcaacctacagaatgggagaaaatttttgcaatctatccatctgacaaaggtcta
atatctagaatctacaaggaaagaaaacaaatttacaagaaaaaaacaaacaaccccatc
aaaaagtggatgaaggatatgaacagacacttgtcaaaagaagacatttatgcagccaac
gaacatgaaaaaaagctcatcatcactggtcattag

>gi568815594r:89147783_89350110|GENSCAN_predicted_peptide_4|90_aa
MALGELNLFSAKEIPKAAYSRRLSQQPGGMSAVQHNIHFNYPFNNLAFRSFSNAIHPITS
KHSLALCQCRDLLYIRNLPVHVLPQLLWLS

>gi568815594r:89147783_89350110|GENSCAN_predicted_CDS_4|273_bp
atggccttgggagagctgaatctcttttcagccaaggaaattccaaaggcagcttacagc
cgaaggctatctcagcagccggggggaatgtcggcagtgcagcacaacatccacttcaac
tatccattcaacaatttagcctttaggtctttttcaaatgccattcatccaataacctca
aaacattccttggcactttgtcaatgcagggacctgctttatattagaaatcttcctgtc
catgtcctcccacaactgctgtggctgagctga

>gi568815594r:89147783_89350110|GENSCAN_predicted_peptide_5|111_aa
MRVCSLGVIGYTRGPQLLDHRPVQVLGRTAVEIPFLPNNLVEDQGGRGRKRVWKGHTFLS
AALCLWQILDELKIFKEVAAADPNLERINQKGPRTTSGSIANRKQNAQIHM

>gi568815594r:89147783_89350110|GENSCAN_predicted_CDS_5|336_bp
atgcgggtttgtagcctaggagtaataggctataccaggggtcctcaactcctggaccat
agaccagtacaagtactgggccgcacagcagtcgagattccatttctgccaaataatctg
gttgaagaccagggaggaagaggaagaaagagggtctggaaaggtcacactttcctgagt
gctgcactctgcctgtggcagatccttgatgaattgaagatattcaaggaggtggcagca
gctgacccgaatttggagagaatcaaccaaaaagggccacgcacaacatcaggaagcatt
gctaacagaaaacaaaatgctcagatacatatgtaa

>gi568815594r:89147783_89350110|GENSCAN_predicted_peptide_6|776_aa
MGTVPDPLRSAKTSLIAASGKEDDLGEPQAASPRHRPALLCKNANGFSGAPAEPDLSPRA
AAEALMQVCEHETTQPDMSSPGVFNEVQKAPATFNSPGNPQLPGSSQPAASAPSSAAGRD
LIHTPLTMPANQHTCQSIPGDQPNAITSSMPEDSLMRSQRTSNREQPEKPSCPVGGVLSS
SKDQVSCEFPSPETIQGTVQTPVTAARVVSHSSSPVGGPEGERQGAICDSEMRSCKPLTR
ESGCSENKQPSVTASGPQGTTSVTPQPTPLTSEPSACPPGPEKVPLPAQRQMSRFKEAST
MTNQAESEIKEVPSRAWQDAEVQAVASVESRSVSTSPSILTAFLKESRAPEHFEQEQLRV
ICHSSGSHTLELSDSTLAPQESSQCPGIMPQVHIQAAAAESTAFQRENKLASLPGGVLKT
SSINLVSSNAQHTCKEDGRLAGMTPVREESTAKKLAGTNSSSLKATAIDQISISACSQAE
TSYGLGKFETRPSEFAEKTTNGHKTDPDCKLSDSCGSISKADHSGSLDPTNKGDAREKKP
ASPQVVKEKESTGTDTSDAKTLLLNPKSQESGGTESAANPTPSPIRKNQESTLEENRQTK
TATSLSLPSDPMGDSSPGSGKKTPSRSVKASPRRPSRVSEFLKEQKLNVTAAAAQVGLTP
GDKKKQLGADSKLQLKQSKRVRDVVWDEQGMTWEVYGASLDAESLGIAIQNHLQRQIREH
EKLIKTQNSQTRRSISSDTSSNKKLRGRQHSVFQSMLQNFRRPNCCVRPAPSSVLD

>gi568815594r:89147783_89350110|GENSCAN_predicted_CDS_6|2331_bp
atggggactgtacctgaccctctgagatcagctaaaacttccctgattgcagcttccgga
aaagaagacgatctaggagagccacaggctgcctcacctcggcatcgaccagctctcctg
tgtaagaatgccaatggcttttcaggtgcccctgcagaaccagacctcagccccagggca
gctgccgaagccctgatgcaggtttgtgagcatgagaccacccaaccagatatgtcttct
cctggtgtgttcaatgaagtgcagaaagcacctgccacattcaactctcccggcaatccc
cagctgccagggagcagccagcccgcagcatcagccccgagttctgcagcaggaagggat
cttatacacacaccattgacaatgcccgccaatcagcacacctgccagtccatcccaggt
gatcagcccaatgccatcacctcatccatgcctgaagattccctgatgagatcacagaga
acctcaaatagagagcaacctgagaaaccaagttgtcctgtgggaggcgtcctcagtagc
agcaaagatcaggtgtcctgtgagtttccttctccagaaacaatccagggaacagtgcag
actccagtgacagcagccagggtggtcagtcactcatcctctcctgtaggtggacctgaa
ggggaaaggcagggagccatctgtgactctgaaatgaggtcctgtaaacctctaactaga
gaatctggatgttcagagaacaagcagccctctgtcactgcctcgggcccccaaggcaca
acttctgtgacacctcaaccaacccccctcactagcgaaccttcggcatgtcccccaggt
ccagagaaggtgccgctgccagcacagcgtcagatgtcaaggttcaaagaagccagtacg
atgaccaaccaagctgaaagtgaaatcaaggaagttcccagcagggcttggcaagatgcg
gaggtgcaggcagtggcgagtgtcgagagcagatccgtctccaccagccccagtatcctc
actgcatttctgaaggaaagccgtgctcctgagcattttgaacaagagcagctgcgtgtc
atttgccacagcagtgggagccacacactggagctctctgacagcacgctagccccccag
gagtccagccagtgccctggcatcatgccacaggtgcacattcaggcagctgcagctgag
tctacagctttccaacgggaaaataaacttgcgagcctaccaggtggggtccttaaaacc
tcatcaatcaatttggtctccagtaatgcccagcatacgtgtaaagaagatgggaggtta
gcaggaatgactccagtgagggaagagtcaactgctaaaaagctcgcaggtactaattct
agctccctgaaagctaccgccattgaccagatttctatcagtgcatgcagtcaagctgaa
acaagttatggattggggaaatttgaaaccaggccatctgagtttgcagagaaaacgaca
aacggccacaaaacagacccagattgcaaactatctgactcttgtggctctatcagcaaa
gctgatcattctgggagcttggatcccactaataaaggagatgcaagggaaaagaagcct
gcatctcctcaggtagtaaaagaaaaagagtctactggcactgatacctcggatgccaaa
accctactgctcaatcctaaatcccaagaaagtggaggcacagaatcagctgctaatcct
acaccctccccaattaggaagaaccaggagagcaccttagaagaaaacagacagaccaag
acagccaccagcctgagcctgccatctgatcccatgggtgactccagcccaggttctggc
aagaagaccccatctcgctccgtcaaagccagcccacgcaggcccagccgcgtcagcgag
ttcctcaaggagcaaaagttaaatgtgacagcagctgctgctcaggtaggactcactcca
ggagataagaaaaagcagcttggcgcagactccaagctccagctgaaacagtccaagcgt
gtcagggacgtcgtgtgggatgagcagggaatgacctgggaagtgtatggtgcatccttg
gacgcagagtccctgggaatcgcgatccagaaccatttgcaaagacaaatcagggaacat
gagaaattaatcaaaactcaaaatagccagacccggagatccatttcctcagatacttct
tcaaataagaagctcagaggaaggcagcacagtgttttccagtccatgctgcagaacttc
cgacgccccaactgctgcgtccgtcctgccccgtcttctgtgttagattga

>gi568815594r:89147783_89350110|GENSCAN_predicted_peptide_7|110_aa
MHADVSVSDDGFVLVYASTPFPSALCCAGSLISAHPGSLLPSTMSGSSLKPSPEADTGPR
LFVQPAELCNSPTTACTFMHEAQLPQTQFFHSSNAAYVITNSDCLIIIVK

>gi568815594r:89147783_89350110|GENSCAN_predicted_CDS_7|333_bp
atgcacgctgacgtttctgtcagtgatgatggattcgtgctggtctacgcttcaacaccc
tttccatctgctctttgctgtgcagggagtttgatctctgcacaccctggctcccttttg
ccttctaccatgagtggaagcagcctgaagccttccccagaagcagatactggtcccagg
ctttttgtacaacctgcagaactgtgtaatagtccaacaactgcctgtaccttcatgcat
gaggcacagctgcctcagacacagtttttccactcctccaatgcagcttatgtaatcact
aatagtgactgtctaataatcattgttaaatga

>gi568815594r:89147783_89350110|GENSCAN_predicted_peptide_8|497_aa
MGKDFMSKTPKAMATKAKIDKWDLIKLKSFCTAKEAIIRVNRQPTEWQKIFSIYPSDKRL
ISRIYKELKQIYKKKSNNPIKKWAKAINRHFSKEDIYAANRHMKKCSSSLAIREMQIKTT
MRYHLTPVRVAIIKKSGNNRRPARASNHWRHHEFLKEDISLRTARDKEASKGAGKYLLNN
FVLYMKYLQESLEMTTDSEIFGQIFRERTSHKQQLLSSVEDARTLNNTSDYEEREFQEEL
GWGTNNEFMLLWNNILEGQSFSQVMNFSARSLLSLALALKADGNDVGIISDAIMDSERGK
KGEVLNMPLGSEFWVMGRHRIQTRFQGLSGGPLGEITAWGVGSSRLRRCECPQSSRGVIY
WLGLVQLNVTVELLTLRDTPHCGVIISFLRMQLQSLAQKAEVVILNDPDLNSPKGTGTLH
CKAIRAPGPETKRGDLWGAKCPAAWLLPAMDKVIWEVTQISFVANWNEERFRKGNSGNEF
PSDLRQWYKTTIEDASP

>gi568815594r:89147783_89350110|GENSCAN_predicted_CDS_8|1494_bp
atgggcaaggatttcatgtctaaaacaccaaaagcaatggcaacaaaagccaaaattgac
aaatgggatctaattaaactaaagagcttctgcacagcaaaagaagctatcatcagagtg
aacaggcaacctacagaatggcagaaaattttttcaatctacccatctgacaaaaggcta
atatccagaatctacaaagaacttaaacaaatttacaagaaaaaatcaaacaaccccatc
aaaaagtgggcaaaggctataaacagacacttctccaaagaagacatttatgcagccaac
agacacatgaaaaaatgctcatcatcactggccatcagagaaatgcaaatcaaaaccaca
atgagatatcatctcacaccagttagagtggcgatcattaaaaagtcaggaaacaacagg
agacctgcccgtgcctcaaaccattggaggcatcatgagttcctgaaggaagacatatcc
ctgaggacagccagagacaaagaggcttctaaaggtgcaggtaaatatcttctaaataac
tttgtgctctacatgaaatacctacaggaaagcctagagatgactacagacagtgagata
tttggccagatatttagagaacgtacttcacacaagcaacagttactgagttcagttgag
gatgcgagaaccctgaataacacaagtgactatgaagaaagggaatttcaggaggagtta
gggtggggcacaaataacgaattcatgttgttgtggaacaatatattagaggggcagtct
ttctcgcaggtgatgaatttctctgcaaggtcattgctctctttggctctggctttgaag
gcagatggaaacgatgtaggcatcatttcagacgcaataatggacagtgaaagagggaaa
aaaggagaggtacttaatatgccactgggaagtgaattttgggtgatgggaaggcatcga
atccagaccaggtttcaagggctttctggagggccattgggagaaatcaccgcttggggt
gtaggcagttcaaggttaagacgatgtgaatgtccacaaagcagccgaggagtaatttac
tggttaggccttgttcagttgaatgttactgttgaactattgacattacgagatacacca
cattgtggcgtgattatttcatttctcagaatgcaactacagtcgttggcacagaaggcc
gaggtggtcatcctcaatgaccctgacttgaacagcccgaaagggactggcactcttcac
tgcaaagccattcgtgcacctggcccagaaaccaaaagaggagatctgtggggagccaaa
tgtccggcagcctggctgctgcctgccatggacaaggtgatctgggaggtcacacaaatt
tcctttgtagccaactggaatgaagaacgatttaggaaagggaattctgggaatgagttt
ccatcagatctaagacagtggtacaaaaccaccatagaggatgctagcccataa