Result of FASTA (omim) for pF1KB5241
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB5241, 478 aa
  1>>>pF1KB5241 478 - 478 aa - 478 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 6.0260+/-0.000477; mu= 14.6491+/- 0.029
 mean_var=82.4516+/-17.847, 0's: 0 Z-trim(110.5): 63  B-trim: 1722 in 2/52
 Lambda= 0.141245
 statistics sampled from 18759 (18816) to 18759 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.576), E-opt: 0.2 (0.221), width:  16
 Scan time:  8.250

The best scores are:                                      opt bits E(85289)
NP_001539 (OMIM: 147690) interferon-induced protei ( 478) 3153 652.8 6.2e-187
NP_001257856 (OMIM: 147690) interferon-induced pro ( 478) 3147 651.5 1.4e-186
NP_001257857 (OMIM: 147690) interferon-induced pro ( 447) 2932 607.7 2.1e-173
NP_001257858 (OMIM: 147690) interferon-induced pro ( 447) 2932 607.7 2.1e-173
NP_001257859 (OMIM: 147690) interferon-induced pro ( 447) 2932 607.7 2.1e-173
NP_036552 (OMIM: 616135) interferon-induced protei ( 482) 1765 369.9 8.7e-102
NP_001538 (OMIM: 147040) interferon-induced protei ( 472) 1348 284.9 3.2e-76
NP_001026853 (OMIM: 604650) interferon-induced pro ( 490)  740 161.1 6.6e-39
NP_001540 (OMIM: 604650) interferon-induced protei ( 490)  740 161.1 6.6e-39
NP_001276688 (OMIM: 604650) interferon-induced pro ( 438)  633 139.2 2.2e-32
NP_001276687 (OMIM: 604650) interferon-induced pro ( 438)  633 139.2 2.2e-32
NP_055635 (OMIM: 606081) mitochondrial import rece ( 608)  171 45.2 0.00063


>>NP_001539 (OMIM: 147690) interferon-induced protein wi  (478 aa)
 initn: 3153 init1: 3153 opt: 3153  Z-score: 3477.1  bits: 652.8 E(85289): 6.2e-187
Smith-Waterman score: 3153; 100.0% identity (100.0% similar) in 478 aa overlap (1-478:1-478)

               10        20        30        40        50        60
pF1KB5 MSTNGDDHQVKDSLEQLRCHFTWELSIDDDEMPDLENRVLDQIEFLDTKYSVGIHNLLAY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MSTNGDDHQVKDSLEQLRCHFTWELSIDDDEMPDLENRVLDQIEFLDTKYSVGIHNLLAY
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 VKHLKGQNEEALKSLKEAENLMQEEHDNQANVRSLVTWGNFAWMYYHMGRLAEAQTYLDK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VKHLKGQNEEALKSLKEAENLMQEEHDNQANVRSLVTWGNFAWMYYHMGRLAEAQTYLDK
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB5 VENICKKLSNPFRYRMECPEIDCEEGWALLKCGGKNYERAKACFEKVLEVDPENPESSAG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VENICKKLSNPFRYRMECPEIDCEEGWALLKCGGKNYERAKACFEKVLEVDPENPESSAG
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB5 YAISAYRLDGFKLATKNHKPFSLLPLRQAVRLNPDNGYIKVLLALKLQDEGQEAEGEKYI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YAISAYRLDGFKLATKNHKPFSLLPLRQAVRLNPDNGYIKVLLALKLQDEGQEAEGEKYI
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB5 EEALANMSSQTYVFRYAAKFYRRKGSVDKALELLKKALQETPTSVLLHHQIGLCYKAQMI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EEALANMSSQTYVFRYAAKFYRRKGSVDKALELLKKALQETPTSVLLHHQIGLCYKAQMI
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB5 QIKEATKGQPRGQNREKLDKMIRSAIFHFESAVEKKPTFEVAHLDLARMYIEAGNHRKAE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QIKEATKGQPRGQNREKLDKMIRSAIFHFESAVEKKPTFEVAHLDLARMYIEAGNHRKAE
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB5 ENFQKLLCMKPVVEETMQDIHFHYGRFQEFQKKSDVNAIIHYLKAIKIEQASLTRDKSIN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ENFQKLLCMKPVVEETMQDIHFHYGRFQEFQKKSDVNAIIHYLKAIKIEQASLTRDKSIN
              370       380       390       400       410       420

              430       440       450       460       470        
pF1KB5 SLKKLVLRKLRRKALDLESLSLLGFVYKLEGNMNEALEYYERALRLAADFENSVRQGP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SLKKLVLRKLRRKALDLESLSLLGFVYKLEGNMNEALEYYERALRLAADFENSVRQGP
              430       440       450       460       470        

>>NP_001257856 (OMIM: 147690) interferon-induced protein  (478 aa)
 initn: 3147 init1: 3147 opt: 3147  Z-score: 3470.5  bits: 651.5 E(85289): 1.4e-186
Smith-Waterman score: 3147; 99.8% identity (99.8% similar) in 478 aa overlap (1-478:1-478)

               10        20        30        40        50        60
pF1KB5 MSTNGDDHQVKDSLEQLRCHFTWELSIDDDEMPDLENRVLDQIEFLDTKYSVGIHNLLAY
       : ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MCTNGDDHQVKDSLEQLRCHFTWELSIDDDEMPDLENRVLDQIEFLDTKYSVGIHNLLAY
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 VKHLKGQNEEALKSLKEAENLMQEEHDNQANVRSLVTWGNFAWMYYHMGRLAEAQTYLDK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VKHLKGQNEEALKSLKEAENLMQEEHDNQANVRSLVTWGNFAWMYYHMGRLAEAQTYLDK
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB5 VENICKKLSNPFRYRMECPEIDCEEGWALLKCGGKNYERAKACFEKVLEVDPENPESSAG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VENICKKLSNPFRYRMECPEIDCEEGWALLKCGGKNYERAKACFEKVLEVDPENPESSAG
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB5 YAISAYRLDGFKLATKNHKPFSLLPLRQAVRLNPDNGYIKVLLALKLQDEGQEAEGEKYI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YAISAYRLDGFKLATKNHKPFSLLPLRQAVRLNPDNGYIKVLLALKLQDEGQEAEGEKYI
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB5 EEALANMSSQTYVFRYAAKFYRRKGSVDKALELLKKALQETPTSVLLHHQIGLCYKAQMI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EEALANMSSQTYVFRYAAKFYRRKGSVDKALELLKKALQETPTSVLLHHQIGLCYKAQMI
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB5 QIKEATKGQPRGQNREKLDKMIRSAIFHFESAVEKKPTFEVAHLDLARMYIEAGNHRKAE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QIKEATKGQPRGQNREKLDKMIRSAIFHFESAVEKKPTFEVAHLDLARMYIEAGNHRKAE
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB5 ENFQKLLCMKPVVEETMQDIHFHYGRFQEFQKKSDVNAIIHYLKAIKIEQASLTRDKSIN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ENFQKLLCMKPVVEETMQDIHFHYGRFQEFQKKSDVNAIIHYLKAIKIEQASLTRDKSIN
              370       380       390       400       410       420

              430       440       450       460       470        
pF1KB5 SLKKLVLRKLRRKALDLESLSLLGFVYKLEGNMNEALEYYERALRLAADFENSVRQGP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SLKKLVLRKLRRKALDLESLSLLGFVYKLEGNMNEALEYYERALRLAADFENSVRQGP
              430       440       450       460       470        

>>NP_001257857 (OMIM: 147690) interferon-induced protein  (447 aa)
 initn: 2932 init1: 2932 opt: 2932  Z-score: 3234.1  bits: 607.7 E(85289): 2.1e-173
Smith-Waterman score: 2932; 100.0% identity (100.0% similar) in 447 aa overlap (32-478:1-447)

              10        20        30        40        50        60 
pF1KB5 STNGDDHQVKDSLEQLRCHFTWELSIDDDEMPDLENRVLDQIEFLDTKYSVGIHNLLAYV
                                     ::::::::::::::::::::::::::::::
NP_001                               MPDLENRVLDQIEFLDTKYSVGIHNLLAYV
                                             10        20        30

              70        80        90       100       110       120 
pF1KB5 KHLKGQNEEALKSLKEAENLMQEEHDNQANVRSLVTWGNFAWMYYHMGRLAEAQTYLDKV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KHLKGQNEEALKSLKEAENLMQEEHDNQANVRSLVTWGNFAWMYYHMGRLAEAQTYLDKV
               40        50        60        70        80        90

             130       140       150       160       170       180 
pF1KB5 ENICKKLSNPFRYRMECPEIDCEEGWALLKCGGKNYERAKACFEKVLEVDPENPESSAGY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ENICKKLSNPFRYRMECPEIDCEEGWALLKCGGKNYERAKACFEKVLEVDPENPESSAGY
              100       110       120       130       140       150

             190       200       210       220       230       240 
pF1KB5 AISAYRLDGFKLATKNHKPFSLLPLRQAVRLNPDNGYIKVLLALKLQDEGQEAEGEKYIE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AISAYRLDGFKLATKNHKPFSLLPLRQAVRLNPDNGYIKVLLALKLQDEGQEAEGEKYIE
              160       170       180       190       200       210

             250       260       270       280       290       300 
pF1KB5 EALANMSSQTYVFRYAAKFYRRKGSVDKALELLKKALQETPTSVLLHHQIGLCYKAQMIQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EALANMSSQTYVFRYAAKFYRRKGSVDKALELLKKALQETPTSVLLHHQIGLCYKAQMIQ
              220       230       240       250       260       270

             310       320       330       340       350       360 
pF1KB5 IKEATKGQPRGQNREKLDKMIRSAIFHFESAVEKKPTFEVAHLDLARMYIEAGNHRKAEE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IKEATKGQPRGQNREKLDKMIRSAIFHFESAVEKKPTFEVAHLDLARMYIEAGNHRKAEE
              280       290       300       310       320       330

             370       380       390       400       410       420 
pF1KB5 NFQKLLCMKPVVEETMQDIHFHYGRFQEFQKKSDVNAIIHYLKAIKIEQASLTRDKSINS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NFQKLLCMKPVVEETMQDIHFHYGRFQEFQKKSDVNAIIHYLKAIKIEQASLTRDKSINS
              340       350       360       370       380       390

             430       440       450       460       470        
pF1KB5 LKKLVLRKLRRKALDLESLSLLGFVYKLEGNMNEALEYYERALRLAADFENSVRQGP
       :::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LKKLVLRKLRRKALDLESLSLLGFVYKLEGNMNEALEYYERALRLAADFENSVRQGP
              400       410       420       430       440       

>>NP_001257858 (OMIM: 147690) interferon-induced protein  (447 aa)
 initn: 2932 init1: 2932 opt: 2932  Z-score: 3234.1  bits: 607.7 E(85289): 2.1e-173
Smith-Waterman score: 2932; 100.0% identity (100.0% similar) in 447 aa overlap (32-478:1-447)

              10        20        30        40        50        60 
pF1KB5 STNGDDHQVKDSLEQLRCHFTWELSIDDDEMPDLENRVLDQIEFLDTKYSVGIHNLLAYV
                                     ::::::::::::::::::::::::::::::
NP_001                               MPDLENRVLDQIEFLDTKYSVGIHNLLAYV
                                             10        20        30

              70        80        90       100       110       120 
pF1KB5 KHLKGQNEEALKSLKEAENLMQEEHDNQANVRSLVTWGNFAWMYYHMGRLAEAQTYLDKV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KHLKGQNEEALKSLKEAENLMQEEHDNQANVRSLVTWGNFAWMYYHMGRLAEAQTYLDKV
               40        50        60        70        80        90

             130       140       150       160       170       180 
pF1KB5 ENICKKLSNPFRYRMECPEIDCEEGWALLKCGGKNYERAKACFEKVLEVDPENPESSAGY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ENICKKLSNPFRYRMECPEIDCEEGWALLKCGGKNYERAKACFEKVLEVDPENPESSAGY
              100       110       120       130       140       150

             190       200       210       220       230       240 
pF1KB5 AISAYRLDGFKLATKNHKPFSLLPLRQAVRLNPDNGYIKVLLALKLQDEGQEAEGEKYIE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AISAYRLDGFKLATKNHKPFSLLPLRQAVRLNPDNGYIKVLLALKLQDEGQEAEGEKYIE
              160       170       180       190       200       210

             250       260       270       280       290       300 
pF1KB5 EALANMSSQTYVFRYAAKFYRRKGSVDKALELLKKALQETPTSVLLHHQIGLCYKAQMIQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EALANMSSQTYVFRYAAKFYRRKGSVDKALELLKKALQETPTSVLLHHQIGLCYKAQMIQ
              220       230       240       250       260       270

             310       320       330       340       350       360 
pF1KB5 IKEATKGQPRGQNREKLDKMIRSAIFHFESAVEKKPTFEVAHLDLARMYIEAGNHRKAEE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IKEATKGQPRGQNREKLDKMIRSAIFHFESAVEKKPTFEVAHLDLARMYIEAGNHRKAEE
              280       290       300       310       320       330

             370       380       390       400       410       420 
pF1KB5 NFQKLLCMKPVVEETMQDIHFHYGRFQEFQKKSDVNAIIHYLKAIKIEQASLTRDKSINS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NFQKLLCMKPVVEETMQDIHFHYGRFQEFQKKSDVNAIIHYLKAIKIEQASLTRDKSINS
              340       350       360       370       380       390

             430       440       450       460       470        
pF1KB5 LKKLVLRKLRRKALDLESLSLLGFVYKLEGNMNEALEYYERALRLAADFENSVRQGP
       :::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LKKLVLRKLRRKALDLESLSLLGFVYKLEGNMNEALEYYERALRLAADFENSVRQGP
              400       410       420       430       440       

>>NP_001257859 (OMIM: 147690) interferon-induced protein  (447 aa)
 initn: 2932 init1: 2932 opt: 2932  Z-score: 3234.1  bits: 607.7 E(85289): 2.1e-173
Smith-Waterman score: 2932; 100.0% identity (100.0% similar) in 447 aa overlap (32-478:1-447)

              10        20        30        40        50        60 
pF1KB5 STNGDDHQVKDSLEQLRCHFTWELSIDDDEMPDLENRVLDQIEFLDTKYSVGIHNLLAYV
                                     ::::::::::::::::::::::::::::::
NP_001                               MPDLENRVLDQIEFLDTKYSVGIHNLLAYV
                                             10        20        30

              70        80        90       100       110       120 
pF1KB5 KHLKGQNEEALKSLKEAENLMQEEHDNQANVRSLVTWGNFAWMYYHMGRLAEAQTYLDKV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KHLKGQNEEALKSLKEAENLMQEEHDNQANVRSLVTWGNFAWMYYHMGRLAEAQTYLDKV
               40        50        60        70        80        90

             130       140       150       160       170       180 
pF1KB5 ENICKKLSNPFRYRMECPEIDCEEGWALLKCGGKNYERAKACFEKVLEVDPENPESSAGY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ENICKKLSNPFRYRMECPEIDCEEGWALLKCGGKNYERAKACFEKVLEVDPENPESSAGY
              100       110       120       130       140       150

             190       200       210       220       230       240 
pF1KB5 AISAYRLDGFKLATKNHKPFSLLPLRQAVRLNPDNGYIKVLLALKLQDEGQEAEGEKYIE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AISAYRLDGFKLATKNHKPFSLLPLRQAVRLNPDNGYIKVLLALKLQDEGQEAEGEKYIE
              160       170       180       190       200       210

             250       260       270       280       290       300 
pF1KB5 EALANMSSQTYVFRYAAKFYRRKGSVDKALELLKKALQETPTSVLLHHQIGLCYKAQMIQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EALANMSSQTYVFRYAAKFYRRKGSVDKALELLKKALQETPTSVLLHHQIGLCYKAQMIQ
              220       230       240       250       260       270

             310       320       330       340       350       360 
pF1KB5 IKEATKGQPRGQNREKLDKMIRSAIFHFESAVEKKPTFEVAHLDLARMYIEAGNHRKAEE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IKEATKGQPRGQNREKLDKMIRSAIFHFESAVEKKPTFEVAHLDLARMYIEAGNHRKAEE
              280       290       300       310       320       330

             370       380       390       400       410       420 
pF1KB5 NFQKLLCMKPVVEETMQDIHFHYGRFQEFQKKSDVNAIIHYLKAIKIEQASLTRDKSINS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NFQKLLCMKPVVEETMQDIHFHYGRFQEFQKKSDVNAIIHYLKAIKIEQASLTRDKSINS
              340       350       360       370       380       390

             430       440       450       460       470        
pF1KB5 LKKLVLRKLRRKALDLESLSLLGFVYKLEGNMNEALEYYERALRLAADFENSVRQGP
       :::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LKKLVLRKLRRKALDLESLSLLGFVYKLEGNMNEALEYYERALRLAADFENSVRQGP
              400       410       420       430       440       

>>NP_036552 (OMIM: 616135) interferon-induced protein wi  (482 aa)
 initn: 1800 init1: 1016 opt: 1765  Z-score: 1948.4  bits: 369.9 E(85289): 8.7e-102
Smith-Waterman score: 1765; 57.3% identity (82.1% similar) in 464 aa overlap (10-473:9-469)

               10        20        30        40        50        60
pF1KB5 MSTNGDDHQVKDSLEQLRCHFTWELSIDDDEMPDLENRVLDQIEFLDTKYSVGIHNLLAY
                .:  : .:.:::::.:  .: .. ..:. . .:.::: ::  ....:::::
NP_036  MSEIRKDTLKAILLELECHFTWNLLKEDIDLFEVEDTIGQQLEFLTTKSRLALYNLLAY
                10        20        30        40        50         

               70        80        90       100       110       120
pF1KB5 VKHLKGQNEEALKSLKEAENLMQEEHDNQANVRSLVTWGNFAWMYYHMGRLAEAQTYLDK
       ::::::::..::. :..::...:.::... .:::::::::.::.:::: .: ::: :  :
NP_036 VKHLKGQNKDALECLEQAEEIIQQEHSDKEEVRSLVTWGNYAWVYYHMDQLEEAQKYTGK
      60        70        80        90       100       110         

              130       140       150       160       170       180
pF1KB5 VENICKKLSNPFRYRMECPEIDCEEGWALLKCGGKNYERAKACFEKVLEVDPENPESSAG
       . :.:::::.:  :..:::: :::.:::::: ::: :..::: :::.:::.:.::: . :
NP_036 IGNVCKKLSSPSNYKLECPETDCEKGWALLKFGGKYYQKAKAAFEKALEVEPDNPEFNIG
     120       130       140       150       160       170         

              190       200       210       220       230       240
pF1KB5 YAISAYRLDGFKLATKNHKPFSLLPLRQAVRLNPDNGYIKVLLALKLQDEGQEAEGEKYI
       :::..::::  .    . : ::: :::.:: :::::.::::.:::::::   ::::::::
NP_036 YAITVYRLDD-SDREGSVKSFSLGPLRKAVTLNPDNSYIKVFLALKLQDVHAEAEGEKYI
     180        190       200       210       220       230        

              250       260       270       280       290       300
pF1KB5 EEALANMSSQTYVFRYAAKFYRRKGSVDKALELLKKALQETPTSVLLHHQIGLCYKAQMI
       :: : ..::: ::.::::::::::.: .::::::::::. :::: .::::.::::.::::
NP_036 EEILDQISSQPYVLRYAAKFYRRKNSWNKALELLKKALEVTPTSSFLHHQMGLCYRAQMI
      240       250       260       270       280       290        

              310       320       330       340       350       360
pF1KB5 QIKEATKGQPRGQNREKLDKMIRSAIFHFESAVEKKPTFEVAHLDLARMYIEAGNHRKAE
       :::.::...:.:... :.:..: ::::::..:.:.   :  :. ::: :: :.:.. .::
NP_036 QIKKATHNRPKGKDKLKVDELISSAIFHFKAAMERDSMFAFAYTDLANMYAEGGQYSNAE
      300       310       320       330       340       350        

              370       380       390       400       410       420
pF1KB5 ENFQKLLCMKPVVEETMQDIHFHYGRFQEFQKKSDVNAIIHYLKAIKIEQASLTRDKSIN
       . :.: : .. ....  ..::.::::::::..::. .:: :::.:.:... :  : :  .
NP_036 DIFRKALRLENITDDHKHQIHYHYGRFQEFHRKSENTAIHHYLEALKVKDRSPLRTKLTS
      360       370       380       390       400       410        

              430       440       450       460       470          
pF1KB5 SLKKLVLRKLRRKALDLESLSLLGFVYKLEGNMNEALEYYERALRLAADFENSVRQGP  
       .::::  ..: ..:::..::: :::::::::.  .: ::::.: ..  : ::.       
NP_036 ALKKLSTKRLCHNALDVQSLSALGFVYKLEGEKRQAAEYYEKAQKI--DPENAEFLTALC
      420       430       440       450       460         470      

NP_036 ELRLSI
        480  

>>NP_001538 (OMIM: 147040) interferon-induced protein wi  (472 aa)
 initn: 941 init1: 512 opt: 1348  Z-score: 1489.3  bits: 284.9 E(85289): 3.2e-76
Smith-Waterman score: 1348; 46.5% identity (76.3% similar) in 469 aa overlap (1-464:1-457)

               10        20        30        40        50        60
pF1KB5 MSTNGDDHQVKDSLEQLRCHFTWELSIDDDEMPDLENRVLDQIEFLDTKYSVGIHNLLAY
       :: : . .....::.::.:::::.:   .. . :.:..:. . :: . .... . :::::
NP_001 MSEN-NKNSLESSLRQLKCHFTWNLMEGENSLDDFEDKVFYRTEFQNREFKATMCNLLAY
                10        20        30        40        50         

               70        80        90       100       110       120
pF1KB5 VKHLKGQNEEALKSLKEAENLMQEEHDNQANVRSLVTWGNFAWMYYHMGRLAEAQTYLDK
       .:::::::: ::. :..::.:.:.:: .::..::::::::.::.:::::::...: :.::
NP_001 LKHLKGQNEAALECLRKAEELIQQEHADQAEIRSLVTWGNYAWVYYHMGRLSDVQIYVDK
      60        70        80        90       100       110         

              130       140       150       160       170       180
pF1KB5 VENICKKLSNPFRYRMECPEIDCEEGWALLKCGGKNYERAKACFEKVLEVDPENPESSAG
       :...:.:.:.:  ::.: ::.::::::. :::::.. ::::.::::.::  :.::: ..:
NP_001 VKHVCEKFSSP--YRIESPELDCEEGWTRLKCGGNQNERAKVCFEKALEKKPKNPEFTSG
     120       130         140       150       160       170       

              190       200       210       220          230       
pF1KB5 YAISAYRLDGFKLATKNHKPFSLLPLRQAVRLNPDNGYIKVLLALKLQ---DEGQE-AEG
        ::..::::..   ..:    .. :::::.:::::: :.::::::::.   .::.: .::
NP_001 LAIASYRLDNWP-PSQN----AIDPLRQAIRLNPDNQYLKVLLALKLHKMREEGEEEGEG
       180        190           200       210       220       230  

        240       250       260       270       280       290      
pF1KB5 EKYIEEALANMSSQTYVFRYAAKFYRRKGSVDKALELLKKALQETPTSVLLHHQIGLCYK
       :: .:::: .  . : :.: ::::::::   :::.:::::::.  :... :: ::: ::.
NP_001 EKLVEEALEKAPGVTDVLRSAAKFYRRKDEPDKAIELLKKALEYIPNNAYLHCQIGCCYR
            240       250       260       270       280       290  

        300       310       320       330        340       350     
pF1KB5 AQMIQIKEATKGQPRGQNREKLDKMIRSAIFHFESAVEKKPT-FEVAHLDLARMYIEAGN
       :...:. .  ..   :  ..:: ..:  :. :...: : . . :.:  . :: ..  : .
NP_001 AKVFQVMNLRENGMYG--KRKLLELIGHAVAHLKKADEANDNLFRVCSI-LASLHALADQ
            300         310       320       330        340         

         360       370       380       390       400       410     
pF1KB5 HRKAEENFQKLLCMKPVVEETMQDIHFHYGRFQEFQKKSDVNAIIHYLKAIKIEQASLTR
       .. ::  ::: .  : ..  . : .:..:: :: .: : . .:: :.....::.: :  .
NP_001 YEDAEYYFQKEFS-KELTPVAKQLLHLRYGNFQLYQMKCEDKAIHHFIEGVKINQKSREK
     350       360        370       380       390       400        

         420       430       440       450       460       470     
pF1KB5 DKSINSLKKLVLRKLRRKALDLESLSLLGFVYKLEGNMNEALEYYERALRLAADFENSVR
       .:  ..:.:..  .: ... : :.: .:.:. .:. .:..: :  ::.:           
NP_001 EKMKDKLQKIAKMRLSKNGADSEALHVLAFLQELNEKMQQADEDSERGLESGSLIPSASS
      410       420       430       440       450       460        

           
pF1KB5 QGP 
           
NP_001 WNGE
      470  

>>NP_001026853 (OMIM: 604650) interferon-induced protein  (490 aa)
 initn: 1028 init1: 527 opt: 740  Z-score: 819.5  bits: 161.1 E(85289): 6.6e-39
Smith-Waterman score: 1225; 44.6% identity (73.0% similar) in 471 aa overlap (11-474:6-453)

               10            20        30        40        50      
pF1KB5 MSTNGDDHQVKDSLE----QLRCHFTWELSIDDDEMPDLENRVLDQIEFLDTKYSVGIHN
                 :.:::    ::.:::::.:  .:.   :::.:: .:::::.:.... ..:
NP_001      MSEVTKNSLEKILPQLKCHFTWNLFKEDSVSRDLEDRVCNQIEFLNTEFKATMYN
                    10        20        30        40        50     

         60        70        80        90       100       110      
pF1KB5 LLAYVKHLKGQNEEALKSLKEAENLMQEEHDNQANVRSLVTWGNFAWMYYHMGRLAEAQT
       ::::.::: :.:: ::. :..::.:.:.:: .::..::::::::.::.:::.:::..:: 
NP_001 LLAYIKHLDGNNEAALECLRQAEELIQQEHADQAEIRSLVTWGNYAWVYYHLGRLSDAQI
          60        70        80        90       100       110     

        120       130       140       150       160       170      
pF1KB5 YLDKVENICKKLSNPFRYRMECPEIDCEEGWALLKCGGKNYERAKACFEKVLEVDPENPE
       :.:::.. :::.:::  : .:  :.::::::. :::: .: ::::.::::.::  :.:::
NP_001 YVDKVKQTCKKFSNP--YSIEYSELDCEEGWTQLKCG-RN-ERAKVCFEKALEEKPNNPE
         120       130         140       150         160       170 

        180       190         200       210       220       230    
pF1KB5 SSAGYAISAYRLDGFKLATKNH--KPFSLLPLRQAVRLNPDNGYIKVLLALKLQDEGQEA
        :.: ::. :.::       ::  : ::   :.::..:.::: :.::::.::::  ..::
NP_001 FSSGLAIAMYHLD-------NHPEKQFSTDVLKQAIELSPDNQYVKVLLGLKLQKMNKEA
             180              190       200       210       220    

          240       250       260       270       280       290    
pF1KB5 EGEKYIEEALANMSSQTYVFRYAAKFYRRKGSVDKALELLKKALQETPTSVLLHHQIGLC
       :::...:::: .   :: :.: :::::::::..:::.::....:. ::..  :.:::: :
NP_001 EGEQFVEEALEKSPCQTDVLRSAAKFYRRKGDLDKAIELFQRVLESTPNNGYLYHQIGCC
          230       240       250       260       270       280    

          300       310       320       330       340       350    
pF1KB5 YKAQMIQIKEATKGQPRGQNREKLDKMIRSAIFHFESAVEKKPTFEVAHLDLARMYIEAG
       :::.. :.... ...  : :.: .. . . :. . ..:.::  .   :. :::. ..:. 
NP_001 YKAKVRQMQNTGESEASG-NKEMIEALKQYAMDYSNKALEKGLNPLNAYSDLAE-FLET-
          290       300        310       320       330        340  

          360       370       380       390       400       410    
pF1KB5 NHRKAEENFQKLLCMKPVVEETMQDIHFHYGRFQEFQKKSDVNAIIHYLKAIKIEQASLT
             : .:  .  : : .   :. : .:  .:... ::. .:. : :....: . :  
NP_001 ------ECYQTPFN-KEVPDAEKQQSHQRYCNLQKYNGKSEDTAVQHGLEGLSISKKSTD
                    350       360       370       380       390    

          420       430       440       450       460        470   
pF1KB5 RDKSINSLKKLVLRKLRRKALDLESLSLLGFVYKLEGNMNEALEYYERAL-RLAADFENS
       ...  .. ...    : ..: .   :.  :...: .:.. .: . ::. : ::  :  ..
NP_001 KEEIKDQPQNVSENLLPQNAPNYWYLQ--GLIHKQNGDLLQAAKCYEKELGRLLRDAPSG
          400       410       420         430       440       450  

                                             
pF1KB5 VRQGP                                 
       .                                     
NP_001 IGSIFLSASELEDGSEEMGQGAVSSSPRELLSNSEQLN
            460       470       480       490

>>NP_001540 (OMIM: 604650) interferon-induced protein wi  (490 aa)
 initn: 1028 init1: 527 opt: 740  Z-score: 819.5  bits: 161.1 E(85289): 6.6e-39
Smith-Waterman score: 1225; 44.6% identity (73.0% similar) in 471 aa overlap (11-474:6-453)

               10            20        30        40        50      
pF1KB5 MSTNGDDHQVKDSLE----QLRCHFTWELSIDDDEMPDLENRVLDQIEFLDTKYSVGIHN
                 :.:::    ::.:::::.:  .:.   :::.:: .:::::.:.... ..:
NP_001      MSEVTKNSLEKILPQLKCHFTWNLFKEDSVSRDLEDRVCNQIEFLNTEFKATMYN
                    10        20        30        40        50     

         60        70        80        90       100       110      
pF1KB5 LLAYVKHLKGQNEEALKSLKEAENLMQEEHDNQANVRSLVTWGNFAWMYYHMGRLAEAQT
       ::::.::: :.:: ::. :..::.:.:.:: .::..::::::::.::.:::.:::..:: 
NP_001 LLAYIKHLDGNNEAALECLRQAEELIQQEHADQAEIRSLVTWGNYAWVYYHLGRLSDAQI
          60        70        80        90       100       110     

        120       130       140       150       160       170      
pF1KB5 YLDKVENICKKLSNPFRYRMECPEIDCEEGWALLKCGGKNYERAKACFEKVLEVDPENPE
       :.:::.. :::.:::  : .:  :.::::::. :::: .: ::::.::::.::  :.:::
NP_001 YVDKVKQTCKKFSNP--YSIEYSELDCEEGWTQLKCG-RN-ERAKVCFEKALEEKPNNPE
         120       130         140       150         160       170 

        180       190         200       210       220       230    
pF1KB5 SSAGYAISAYRLDGFKLATKNH--KPFSLLPLRQAVRLNPDNGYIKVLLALKLQDEGQEA
        :.: ::. :.::       ::  : ::   :.::..:.::: :.::::.::::  ..::
NP_001 FSSGLAIAMYHLD-------NHPEKQFSTDVLKQAIELSPDNQYVKVLLGLKLQKMNKEA
             180              190       200       210       220    

          240       250       260       270       280       290    
pF1KB5 EGEKYIEEALANMSSQTYVFRYAAKFYRRKGSVDKALELLKKALQETPTSVLLHHQIGLC
       :::...:::: .   :: :.: :::::::::..:::.::....:. ::..  :.:::: :
NP_001 EGEQFVEEALEKSPCQTDVLRSAAKFYRRKGDLDKAIELFQRVLESTPNNGYLYHQIGCC
          230       240       250       260       270       280    

          300       310       320       330       340       350    
pF1KB5 YKAQMIQIKEATKGQPRGQNREKLDKMIRSAIFHFESAVEKKPTFEVAHLDLARMYIEAG
       :::.. :.... ...  : :.: .. . . :. . ..:.::  .   :. :::. ..:. 
NP_001 YKAKVRQMQNTGESEASG-NKEMIEALKQYAMDYSNKALEKGLNPLNAYSDLAE-FLET-
          290       300        310       320       330        340  

          360       370       380       390       400       410    
pF1KB5 NHRKAEENFQKLLCMKPVVEETMQDIHFHYGRFQEFQKKSDVNAIIHYLKAIKIEQASLT
             : .:  .  : : .   :. : .:  .:... ::. .:. : :....: . :  
NP_001 ------ECYQTPFN-KEVPDAEKQQSHQRYCNLQKYNGKSEDTAVQHGLEGLSISKKSTD
                    350       360       370       380       390    

          420       430       440       450       460        470   
pF1KB5 RDKSINSLKKLVLRKLRRKALDLESLSLLGFVYKLEGNMNEALEYYERAL-RLAADFENS
       ...  .. ...    : ..: .   :.  :...: .:.. .: . ::. : ::  :  ..
NP_001 KEEIKDQPQNVSENLLPQNAPNYWYLQ--GLIHKQNGDLLQAAKCYEKELGRLLRDAPSG
          400       410       420         430       440       450  

                                             
pF1KB5 VRQGP                                 
       .                                     
NP_001 IGSIFLSASELEDGSEEMGQGAVSSSPRELLSNSEQLN
            460       470       480       490

>>NP_001276688 (OMIM: 604650) interferon-induced protein  (438 aa)
 initn: 883 init1: 391 opt: 633  Z-score: 702.4  bits: 139.2 E(85289): 2.2e-32
Smith-Waterman score: 1078; 43.9% identity (72.6% similar) in 424 aa overlap (54-474:1-401)

            30        40        50        60        70        80   
pF1KB5 ELSIDDDEMPDLENRVLDQIEFLDTKYSVGIHNLLAYVKHLKGQNEEALKSLKEAENLMQ
                                     ..:::::.::: :.:: ::. :..::.:.:
NP_001                               MYNLLAYIKHLDGNNEAALECLRQAEELIQ
                                             10        20        30

            90       100       110       120       130       140   
pF1KB5 EEHDNQANVRSLVTWGNFAWMYYHMGRLAEAQTYLDKVENICKKLSNPFRYRMECPEIDC
       .:: .::..::::::::.::.:::.:::..:: :.:::.. :::.:::  : .:  :.::
NP_001 QEHADQAEIRSLVTWGNYAWVYYHLGRLSDAQIYVDKVKQTCKKFSNP--YSIEYSELDC
               40        50        60        70          80        

           150       160       170       180       190         200 
pF1KB5 EEGWALLKCGGKNYERAKACFEKVLEVDPENPESSAGYAISAYRLDGFKLATKNH--KPF
       ::::. :::: .: ::::.::::.::  :.::: :.: ::. :.::       ::  : :
NP_001 EEGWTQLKCG-RN-ERAKVCFEKALEEKPNNPEFSSGLAIAMYHLD-------NHPEKQF
       90        100        110       120       130                

             210       220       230       240       250       260 
pF1KB5 SLLPLRQAVRLNPDNGYIKVLLALKLQDEGQEAEGEKYIEEALANMSSQTYVFRYAAKFY
       :   :.::..:.::: :.::::.::::  ..:::::...:::: .   :: :.: :::::
NP_001 STDVLKQAIELSPDNQYVKVLLGLKLQKMNKEAEGEQFVEEALEKSPCQTDVLRSAAKFY
     140       150       160       170       180       190         

             270       280       290       300       310       320 
pF1KB5 RRKGSVDKALELLKKALQETPTSVLLHHQIGLCYKAQMIQIKEATKGQPRGQNREKLDKM
       ::::..:::.::....:. ::..  :.:::: ::::.. :.... ...  : :.: .. .
NP_001 RRKGDLDKAIELFQRVLESTPNNGYLYHQIGCCYKAKVRQMQNTGESEASG-NKEMIEAL
     200       210       220       230       240       250         

             330       340       350       360       370       380 
pF1KB5 IRSAIFHFESAVEKKPTFEVAHLDLARMYIEAGNHRKAEENFQKLLCMKPVVEETMQDIH
        . :. . ..:.::  .   :. :::. ..:.       : .:  .  : : .   :. :
NP_001 KQYAMDYSNKALEKGLNPLNAYSDLAE-FLET-------ECYQTPFN-KEVPDAEKQQSH
      260       270       280               290        300         

             390       400       410       420       430       440 
pF1KB5 FHYGRFQEFQKKSDVNAIIHYLKAIKIEQASLTRDKSINSLKKLVLRKLRRKALDLESLS
        .:  .:... ::. .:. : :....: . :  ...  .. ...    : ..: .   :.
NP_001 QRYCNLQKYNGKSEDTAVQHGLEGLSISKKSTDKEEIKDQPQNVSENLLPQNAPNYWYLQ
     310       320       330       340       350       360         

             450       460        470                              
pF1KB5 LLGFVYKLEGNMNEALEYYERAL-RLAADFENSVRQGP                      
         :...: .:.. .: . ::. : ::  :  ...                          
NP_001 --GLIHKQNGDLLQAAKCYEKELGRLLRDAPSGIGSIFLSASELEDGSEEMGQGAVSSSP
       370       380       390       400       410       420       

NP_001 RELLSNSEQLN
       430        




478 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sat Nov  5 06:32:36 2016 done: Sat Nov  5 06:32:38 2016
 Total Scan time:  8.250 Total Display time:  0.070

Function used was FASTA [36.3.4 Apr, 2011]
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