Result of FASTA (ccds) for pF1KB5238
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB5238, 207 aa
  1>>>pF1KB5238 207 - 207 aa - 207 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.7106+/-0.000674; mu= 11.5410+/- 0.041
 mean_var=66.8073+/-13.279, 0's: 0 Z-trim(110.6): 35  B-trim: 0 in 0/51
 Lambda= 0.156914
 statistics sampled from 11664 (11699) to 11664 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.743), E-opt: 0.2 (0.359), width:  16
 Scan time:  1.940

The best scores are:                                      opt bits E(32554)
CCDS7358.1 PPIF gene_id:10105|Hs108|chr10          ( 207) 1407 326.7 6.3e-90
CCDS5494.1 PPIA gene_id:5478|Hs108|chr7            ( 165)  893 210.3 5.4e-55
CCDS443.1 PPIE gene_id:10450|Hs108|chr1            ( 301)  847 200.0 1.3e-51
CCDS72898.1 PPIAL4C gene_id:653598|Hs108|chr1      ( 164)  785 185.9 1.2e-47
CCDS41375.2 PPIAL4G gene_id:644591|Hs108|chr1      ( 164)  779 184.5 3.2e-47
CCDS76197.1 PPIAL4A gene_id:653505|Hs108|chr1      ( 164)  778 184.3 3.7e-47
CCDS76201.1 PPIAL4E gene_id:730262|Hs108|chr1      ( 164)  772 182.9 9.5e-47
CCDS76202.1 PPIAL4F gene_id:728945|Hs108|chr1      ( 164)  772 182.9 9.5e-47
CCDS59199.1 PPIAL4D gene_id:645142|Hs108|chr1      ( 164)  769 182.2 1.5e-46
CCDS442.1 PPIE gene_id:10450|Hs108|chr1            ( 296)  769 182.3 2.6e-46
CCDS53299.1 PPIE gene_id:10450|Hs108|chr1          ( 314)  769 182.3 2.7e-46
CCDS2079.1 RANBP2 gene_id:5903|Hs108|chr2          (3224)  770 182.9 1.9e-45
CCDS10191.1 PPIB gene_id:5479|Hs108|chr15          ( 216)  684 163.0 1.2e-40
CCDS3801.1 PPID gene_id:5481|Hs108|chr4            ( 370)  662 158.1 6.2e-39
CCDS469.1 PPIH gene_id:10465|Hs108|chr1            ( 177)  635 151.9 2.2e-37
CCDS75592.1 PPIA gene_id:5478|Hs108|chr7           ( 105)  600 143.9 3.4e-35
CCDS4133.1 PPIC gene_id:5480|Hs108|chr5            ( 212)  599 143.8 7.4e-35
CCDS2235.1 PPIG gene_id:9360|Hs108|chr2            ( 754)  548 132.4 6.9e-31
CCDS2702.1 NKTR gene_id:4820|Hs108|chr3            (1462)  546 132.1 1.7e-30
CCDS81308.1 PPIH gene_id:10465|Hs108|chr1          ( 134)  470 114.5   3e-26
CCDS69169.1 PPIL6 gene_id:285755|Hs108|chr6        ( 279)  457 111.7 4.5e-25
CCDS5074.1 PPIL6 gene_id:285755|Hs108|chr6         ( 311)  457 111.7 4.9e-25
CCDS4826.1 PPIL1 gene_id:51645|Hs108|chr6          ( 166)  414 101.9 2.4e-22
CCDS64162.1 PPWD1 gene_id:23398|Hs108|chr5         ( 490)  399 98.6 6.7e-21
CCDS64161.1 PPWD1 gene_id:23398|Hs108|chr5         ( 616)  399 98.7 8.2e-21
CCDS3985.1 PPWD1 gene_id:23398|Hs108|chr5          ( 646)  399 98.7 8.5e-21
CCDS13793.1 PPIL2 gene_id:23759|Hs108|chr22        ( 520)  373 92.8 4.2e-19
CCDS46670.1 PPIL2 gene_id:23759|Hs108|chr22        ( 527)  373 92.8 4.2e-19
CCDS2333.1 PPIL3 gene_id:53938|Hs108|chr2          ( 161)  361 89.9 9.6e-19
CCDS75252.1 CWC27 gene_id:10283|Hs108|chr5         ( 381)  300 76.2   3e-14
CCDS3982.2 CWC27 gene_id:10283|Hs108|chr5          ( 472)  300 76.2 3.6e-14
CCDS2332.1 PPIL3 gene_id:53938|Hs108|chr2          ( 165)  263 67.7 4.7e-12
CCDS34550.1 PPIL4 gene_id:85313|Hs108|chr6         ( 492)  261 67.4 1.7e-11


>>CCDS7358.1 PPIF gene_id:10105|Hs108|chr10               (207 aa)
 initn: 1407 init1: 1407 opt: 1407  Z-score: 1728.0  bits: 326.7 E(32554): 6.3e-90
Smith-Waterman score: 1407; 100.0% identity (100.0% similar) in 207 aa overlap (1-207:1-207)

               10        20        30        40        50        60
pF1KB5 MLALRCGSRWLGLLSVPRSVPLRLPAARACSKGSGDPSSSSSSGNPLVYLDVDANGKPLG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 MLALRCGSRWLGLLSVPRSVPLRLPAARACSKGSGDPSSSSSSGNPLVYLDVDANGKPLG
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 RVVLELKADVVPKTAENFRALCTGEKGFGYKGSTFHRVIPSFMCQAGDFTNHNGTGGKSI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 RVVLELKADVVPKTAENFRALCTGEKGFGYKGSTFHRVIPSFMCQAGDFTNHNGTGGKSI
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB5 YGSRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVKEGMDV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 YGSRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVKEGMDV
              130       140       150       160       170       180

              190       200       
pF1KB5 VKKIESFGSKSGRTSKKIVITDCGQLS
       :::::::::::::::::::::::::::
CCDS73 VKKIESFGSKSGRTSKKIVITDCGQLS
              190       200       

>>CCDS5494.1 PPIA gene_id:5478|Hs108|chr7                 (165 aa)
 initn: 893 init1: 893 opt: 893  Z-score: 1100.7  bits: 210.3 E(32554): 5.4e-55
Smith-Waterman score: 893; 76.5% identity (91.4% similar) in 162 aa overlap (45-206:3-164)

           20        30        40        50        60        70    
pF1KB5 SVPRSVPLRLPAARACSKGSGDPSSSSSSGNPLVYLDVDANGKPLGRVVLELKADVVPKT
                                     :: :..:. ..:.::::: .:: :: ::::
CCDS54                             MVNPTVFFDIAVDGEPLGRVSFELFADKVPKT
                                           10        20        30  

           80        90       100       110       120       130    
pF1KB5 AENFRALCTGEKGFGYKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIYGSRFPDENFTLKH
       ::::::: ::::::::::: :::.::.::::.:::: ::::::::::: .: :::: :::
CCDS54 AENFRALSTGEKGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKH
             40        50        60        70        80        90  

          140       150       160       170       180       190    
pF1KB5 VGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVKEGMDVVKKIESFGSKSGRT
       .:::.::::::::::::::::::: ::.::::::::::.:::::..:. .: :::..:.:
CCDS54 TGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKT
            100       110       120       130       140       150  

          200       
pF1KB5 SKKIVITDCGQLS
       ::::.:.::::: 
CCDS54 SKKITIADCGQLE
            160     

>>CCDS443.1 PPIE gene_id:10450|Hs108|chr1                 (301 aa)
 initn: 848 init1: 829 opt: 847  Z-score: 1040.3  bits: 200.0 E(32554): 1.3e-51
Smith-Waterman score: 847; 66.1% identity (88.9% similar) in 171 aa overlap (35-205:129-299)

           10        20        30        40        50        60    
pF1KB5 RCGSRWLGLLSVPRSVPLRLPAARACSKGSGDPSSSSSSGNPLVYLDVDANGKPLGRVVL
                                     :.: .... .:: ::.:.  ..:: ::. .
CCDS44 DDWLKKFSGKTLEENKEEEGSEPPKAETQEGEPIAKKARSNPQVYMDIKIGNKPAGRIQM
      100       110       120       130       140       150        

           70        80        90       100       110       120    
pF1KB5 ELKADVVPKTAENFRALCTGEKGFGYKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIYGSR
        :..:::: :::::: ::: :::::.:::.:::.::.::::.::::::::::::::::..
CCDS44 LLRSDVVPMTAENFRCLCTHEKGFGFKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYGKK
      160       170       180       190       200       210        

          130       140       150       160       170       180    
pF1KB5 FPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVKEGMDVVKKI
       : :::: :::.:::.:::::.::::::::::.   :::::::::::::.: ::.::...:
CCDS44 FDDENFILKHTGPGLLSMANSGPNTNGSQFFLTCDKTDWLDGKHVVFGEVTEGLDVLRQI
      220       230       240       250       260       270        

          190       200       
pF1KB5 ESFGSKSGRTSKKIVITDCGQLS
       :. :::.:. ..:..:.:::.  
CCDS44 EAQGSKDGKPKQKVIIADCGEYV
      280       290       300 

>>CCDS72898.1 PPIAL4C gene_id:653598|Hs108|chr1           (164 aa)
 initn: 774 init1: 755 opt: 785  Z-score: 968.6  bits: 185.9 E(32554): 1.2e-47
Smith-Waterman score: 785; 67.3% identity (87.0% similar) in 162 aa overlap (45-206:3-164)

           20        30        40        50        60        70    
pF1KB5 SVPRSVPLRLPAARACSKGSGDPSSSSSSGNPLVYLDVDANGKPLGRVVLELKADVVPKT
                                     : .:..:. ..::::::. ..: :: .:::
CCDS72                             MVNSVVFFDITVDGKPLGRISIKLFADKIPKT
                                           10        20        30  

           80        90       100       110       120       130    
pF1KB5 AENFRALCTGEKGFGYKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIYGSRFPDENFTLKH
       ::::::: :::::: :::: :::.::.::::.::::  :::: ::::: .: :::.  ::
CCDS72 AENFRALSTGEKGFRYKGSCFHRIIPGFMCQGGDFTRPNGTGDKSIYGEKFDDENLIRKH
             40        50        60        70        80        90  

          140       150       160       170       180       190    
pF1KB5 VGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVKEGMDVVKKIESFGSKSGRT
       .: :.::::::::::::::::::: ::.:::::::.::.::: ...:. .: :: ....:
CCDS72 TGSGILSMANAGPNTNGSQFFICTAKTEWLDGKHVAFGKVKERVNIVEAMEHFGYRNSKT
            100       110       120       130       140       150  

          200       
pF1KB5 SKKIVITDCGQLS
       ::::.:.::::. 
CCDS72 SKKITIADCGQF 
            160     

>>CCDS41375.2 PPIAL4G gene_id:644591|Hs108|chr1           (164 aa)
 initn: 769 init1: 750 opt: 779  Z-score: 961.3  bits: 184.5 E(32554): 3.2e-47
Smith-Waterman score: 779; 66.0% identity (87.0% similar) in 162 aa overlap (45-206:3-164)

           20        30        40        50        60        70    
pF1KB5 SVPRSVPLRLPAARACSKGSGDPSSSSSSGNPLVYLDVDANGKPLGRVVLELKADVVPKT
                                     : ....:. ..::::::. ..  :: .:::
CCDS41                             MVNSVIFFDITVDGKPLGRISIKQFADKIPKT
                                           10        20        30  

           80        90       100       110       120       130    
pF1KB5 AENFRALCTGEKGFGYKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIYGSRFPDENFTLKH
       ::::::: :::::: :::: :::.::.::::.::::. :::: ::::: .: :::.  ::
CCDS41 AENFRALSTGEKGFRYKGSCFHRIIPGFMCQGGDFTHPNGTGDKSIYGEKFDDENLIRKH
             40        50        60        70        80        90  

          140       150       160       170       180       190    
pF1KB5 VGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVKEGMDVVKKIESFGSKSGRT
       .: :.::::::::::::::::::: ::.:::::::.::.::: ...:. .: :: ....:
CCDS41 TGSGILSMANAGPNTNGSQFFICTAKTEWLDGKHVAFGKVKERVNIVEAMEHFGYRNSKT
            100       110       120       130       140       150  

          200       
pF1KB5 SKKIVITDCGQLS
       ::::.:.::::. 
CCDS41 SKKITIADCGQF 
            160     

>>CCDS76197.1 PPIAL4A gene_id:653505|Hs108|chr1           (164 aa)
 initn: 767 init1: 748 opt: 778  Z-score: 960.1  bits: 184.3 E(32554): 3.7e-47
Smith-Waterman score: 778; 66.7% identity (87.0% similar) in 162 aa overlap (45-206:3-164)

           20        30        40        50        60        70    
pF1KB5 SVPRSVPLRLPAARACSKGSGDPSSSSSSGNPLVYLDVDANGKPLGRVVLELKADVVPKT
                                     : .:..:. ..::::::. ..: :: . ::
CCDS76                             MVNSVVFFDITVDGKPLGRISIKLFADKILKT
                                           10        20        30  

           80        90       100       110       120       130    
pF1KB5 AENFRALCTGEKGFGYKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIYGSRFPDENFTLKH
       ::::::: :::::: :::: :::.::.::::.:::: ::::: ::::: .: :::.  ::
CCDS76 AENFRALSTGEKGFRYKGSCFHRIIPGFMCQGGDFTRHNGTGDKSIYGEKFDDENLIRKH
             40        50        60        70        80        90  

          140       150       160       170       180       190    
pF1KB5 VGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVKEGMDVVKKIESFGSKSGRT
       .: :.::::::::::::::::::. ::.:::::::.::.::: ...:. .: :: ....:
CCDS76 TGSGILSMANAGPNTNGSQFFICAAKTEWLDGKHVAFGKVKERVNIVEAMEHFGYRNSKT
            100       110       120       130       140       150  

          200       
pF1KB5 SKKIVITDCGQLS
       ::::.:.::::. 
CCDS76 SKKITIADCGQF 
            160     

>>CCDS76201.1 PPIAL4E gene_id:730262|Hs108|chr1           (164 aa)
 initn: 769 init1: 750 opt: 772  Z-score: 952.7  bits: 182.9 E(32554): 9.5e-47
Smith-Waterman score: 772; 66.0% identity (86.4% similar) in 162 aa overlap (45-206:3-164)

           20        30        40        50        60        70    
pF1KB5 SVPRSVPLRLPAARACSKGSGDPSSSSSSGNPLVYLDVDANGKPLGRVVLELKADVVPKT
                                     : .:....  .::::::. ..: :: .:::
CCDS76                             MVNSVVFFEITRDGKPLGRISIKLFADKIPKT
                                           10        20        30  

           80        90       100       110       120       130    
pF1KB5 AENFRALCTGEKGFGYKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIYGSRFPDENFTLKH
       ::::::: :::::: :::: :::.::.::::.::::  :::: ::::: .: :::.  ::
CCDS76 AENFRALSTGEKGFRYKGSCFHRIIPGFMCQGGDFTRPNGTGDKSIYGEKFDDENLIRKH
             40        50        60        70        80        90  

          140       150       160       170       180       190    
pF1KB5 VGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVKEGMDVVKKIESFGSKSGRT
       .: :.::::::::::::::::::. ::.:::::::.::.::: ...:. .: :: ....:
CCDS76 TGSGILSMANAGPNTNGSQFFICAAKTEWLDGKHVAFGKVKERVNIVEAMEHFGYRNSKT
            100       110       120       130       140       150  

          200       
pF1KB5 SKKIVITDCGQLS
       ::::.:.::::. 
CCDS76 SKKITIADCGQF 
            160     

>>CCDS76202.1 PPIAL4F gene_id:728945|Hs108|chr1           (164 aa)
 initn: 769 init1: 750 opt: 772  Z-score: 952.7  bits: 182.9 E(32554): 9.5e-47
Smith-Waterman score: 772; 66.0% identity (86.4% similar) in 162 aa overlap (45-206:3-164)

           20        30        40        50        60        70    
pF1KB5 SVPRSVPLRLPAARACSKGSGDPSSSSSSGNPLVYLDVDANGKPLGRVVLELKADVVPKT
                                     : .:....  .::::::. ..: :: .:::
CCDS76                             MVNSVVFFEITRDGKPLGRISIKLFADKIPKT
                                           10        20        30  

           80        90       100       110       120       130    
pF1KB5 AENFRALCTGEKGFGYKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIYGSRFPDENFTLKH
       ::::::: :::::: :::: :::.::.::::.::::  :::: ::::: .: :::.  ::
CCDS76 AENFRALSTGEKGFRYKGSCFHRIIPGFMCQGGDFTRPNGTGDKSIYGEKFDDENLIRKH
             40        50        60        70        80        90  

          140       150       160       170       180       190    
pF1KB5 VGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVKEGMDVVKKIESFGSKSGRT
       .: :.::::::::::::::::::. ::.:::::::.::.::: ...:. .: :: ....:
CCDS76 TGSGILSMANAGPNTNGSQFFICAAKTEWLDGKHVAFGKVKERVNIVEAMEHFGYRNSKT
            100       110       120       130       140       150  

          200       
pF1KB5 SKKIVITDCGQLS
       ::::.:.::::. 
CCDS76 SKKITIADCGQF 
            160     

>>CCDS59199.1 PPIAL4D gene_id:645142|Hs108|chr1           (164 aa)
 initn: 766 init1: 747 opt: 769  Z-score: 949.1  bits: 182.2 E(32554): 1.5e-46
Smith-Waterman score: 769; 66.0% identity (85.8% similar) in 162 aa overlap (45-206:3-164)

           20        30        40        50        60        70    
pF1KB5 SVPRSVPLRLPAARACSKGSGDPSSSSSSGNPLVYLDVDANGKPLGRVVLELKADVVPKT
                                     : .:....  .::::::. ..: :: .:::
CCDS59                             MVNSVVFFEITRDGKPLGRISIKLFADKIPKT
                                           10        20        30  

           80        90       100       110       120       130    
pF1KB5 AENFRALCTGEKGFGYKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIYGSRFPDENFTLKH
       ::::::: :::::: :::: :::.::.::::.::::  :::: ::::: .: :::.  ::
CCDS59 AENFRALSTGEKGFRYKGSCFHRIIPGFMCQGGDFTRPNGTGDKSIYGEKFDDENLIRKH
             40        50        60        70        80        90  

          140       150       160       170       180       190    
pF1KB5 VGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVKEGMDVVKKIESFGSKSGRT
       .: :.::::::::::::::::::. ::.:::::::.::.::: ...:.  : :: ....:
CCDS59 TGSGILSMANAGPNTNGSQFFICAAKTEWLDGKHVAFGKVKERVNIVEATEHFGYRNSKT
            100       110       120       130       140       150  

          200       
pF1KB5 SKKIVITDCGQLS
       ::::.:.::::. 
CCDS59 SKKITIADCGQF 
            160     

>>CCDS442.1 PPIE gene_id:10450|Hs108|chr1                 (296 aa)
 initn: 769 init1: 769 opt: 769  Z-score: 944.9  bits: 182.3 E(32554): 2.6e-46
Smith-Waterman score: 769; 68.9% identity (88.7% similar) in 151 aa overlap (35-185:129-279)

           10        20        30        40        50        60    
pF1KB5 RCGSRWLGLLSVPRSVPLRLPAARACSKGSGDPSSSSSSGNPLVYLDVDANGKPLGRVVL
                                     :.: .... .:: ::.:.  ..:: ::. .
CCDS44 DDWLKKFSGKTLEENKEEEGSEPPKAETQEGEPIAKKARSNPQVYMDIKIGNKPAGRIQM
      100       110       120       130       140       150        

           70        80        90       100       110       120    
pF1KB5 ELKADVVPKTAENFRALCTGEKGFGYKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIYGSR
        :..:::: :::::: ::: :::::.:::.:::.::.::::.::::::::::::::::..
CCDS44 LLRSDVVPMTAENFRCLCTHEKGFGFKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYGKK
      160       170       180       190       200       210        

          130       140       150       160       170       180    
pF1KB5 FPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVKEGMDVVKKI
       : :::: :::.:::.:::::.::::::::::.   :::::::::::::.: ::.::...:
CCDS44 FDDENFILKHTGPGLLSMANSGPNTNGSQFFLTCDKTDWLDGKHVVFGEVTEGLDVLRQI
      220       230       240       250       260       270        

          190       200       
pF1KB5 ESFGSKSGRTSKKIVITDCGQLS
       :                      
CCDS44 EKQEESAITSQPRSWKLT     
      280       290           




207 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sat Nov  5 06:31:49 2016 done: Sat Nov  5 06:31:49 2016
 Total Scan time:  1.940 Total Display time: -0.010

Function used was FASTA [36.3.4 Apr, 2011]
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