GENSCAN 1.0	Date run:  5-Nov-116	Time: 06:31:41

Sequence gi568815593r:83541499_83773523 : 232025 bp : 37.25% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +     80    770  691  1  1   34  110   669 0.744  58.96
 1.02 Intr +   4039   4152  114  2  0   56   91    88 0.891   5.40
 1.03 Intr +   6473   6586  114  0  0   72  116    40 0.960   4.70
 1.04 Intr +  11866  12024  159  2  0  114   44   168 0.976  14.04
 1.05 Intr +  13458  13540   83  1  2   72   99   114 0.905   9.34
 1.06 Intr +  30918  31062  145  2  1   64   95   113 0.186   8.53
 1.07 Intr +  38482  38664  183  2  0   48  103   115 0.924   7.84
 1.08 Intr +  50468  50626  159  0  0   68   64   100 0.098   4.64
 1.09 Term +  80941  81005   65  2  2  122   46    59 0.418   2.17
 1.10 PlyA +  82297  82302    6                               1.05

 2.11 PlyA -  83620  83615    6                               1.05
 2.10 Term - 100287  99998  290  1  2  139   42   297 0.996  24.75
 2.09 Intr - 103167 102865  303  1  0  115   95   168 0.999  15.84
 2.08 Intr - 111326 110955  372  0  0   61   95   311 0.909  23.21
 2.07 Intr - 132051 131926  126  1  0   53  116    20 0.015   1.03
 2.06 Intr - 149739 149675   65  2  2   92   82    51 0.035   2.34
 2.05 Intr - 150874 150771  104  1  2  124   84    -9 0.042   0.35
 2.04 Intr - 179821 179751   71  2  2   92   48    98 0.523   4.18
 2.03 Intr - 180868 180498  371  0  2  103   66   150 0.889   8.12
 2.02 Intr - 181093 180897  197  1  2   87   28   107 0.949   1.89
 2.01 Init - 182032 181976   57  1  0   79  107    16 0.911   3.96
 2.00 Prom - 185809 185770   40                              -6.95

 3.00 Prom + 186392 186431   40                              -6.95
 3.01 Init + 186571 186799  229  0  1   83   88    98 0.824   7.88
 3.02 Intr + 193460 193776  317  0  2  -22   30   276 0.190   5.66
 3.03 Intr + 193836 193893   58  2  1   61   87    21 0.019  -3.16
 3.04 Intr + 205160 205512  353  0  2  114  -48   440 0.006  27.12
 3.05 Intr + 212797 212984  188  0  2   20  100   166 0.363   8.57
 3.06 Term + 213134 213383  250  2  1  -41   39   243 0.628   0.69
 3.07 PlyA + 213412 213417    6                               1.05

 4.00 Prom + 214433 214472   40                              -6.15
 4.01 Sngl + 216701 217420  720  1  0   74   50   214 0.807  12.17
 4.02 PlyA + 217791 217796    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815593r:83541499_83773523|GENSCAN_predicted_peptide_1|570_aa
MSPQDSFKEIHVNIEATFKPSSEEYLHITEPPSLSPDTKLEPSEDDGKPELLEEMEASPT
ELIAVEGTEILQDFQNKTDGQVSGEAIKMFPTIKTPEAGTVITTADEIELEGATQWPHST
SASATYGVEAGVVPWLSPQTSERPTLSSSPEINPETQAALIRGQDSTIAASEQQVAARIL
DSNDQATVNPVEFNTEVATPPFSLLETSNETDFLIGINEESVEGTAIYLPGPDRCKMNPC
LNGGTCYPTETSYVCTCVPGYSGDQCELDFDECHSNPCRNGATCVDGFNTFRCLCLPSYV
GALCEQDTETCDYGWHKFQGQCYKYFAHRRTWDAAERECRLQGAHLTSILSHEEQMFVNR
VGHDYQWIGLNDKMFEHDFRWTDGSTLQYENWRPNQPDSFFSAGEDCVVIIWHENGQWND
VPCNYHLTYTCKKGTVACGQPPVVENAKTFGKMKPRYEINSLIRYHCKDGFIQRHLPTIR
CLGNGRWAIPKITCMNLPCLGVGNWLLTLEIDRKAPLNILNATERCRVDLWRVIGARQDC
QTTANKGRAGVLPYTWRIGMLTYRGKEESD

>gi568815593r:83541499_83773523|GENSCAN_predicted_CDS_1|1713_bp
atgtccccacaggattcttttaaggaaattcatgtaaatattgaagcgactttcaaacca
tcaagtgaggaataccttcacataactgagcctccctctttatctcctgacacaaaatta
gaaccttcagaagatgatggtaaacctgagttattagaagaaatggaagcttctcccaca
gaacttattgctgtggaaggaactgagattctccaagatttccaaaacaaaaccgatggt
caagtttctggagaagcaatcaagatgtttcccaccattaaaacacctgaggctggaact
gttattacaactgccgatgaaattgaattagaaggtgctacacagtggccacactctact
tctgcttctgccacctatggggtcgaggcaggtgtggtgccttggctaagtccacagact
tctgagaggcccacgctttcttcttctccagaaataaaccctgaaactcaagcagcttta
atcagagggcaggattccacgatagcagcatcagaacagcaagtggcagcgagaattctt
gattccaatgatcaggcaacagtaaaccctgtggaatttaatactgaggttgcaacacca
ccattttcccttctggagacttctaatgaaacagatttcctgattggcattaatgaagag
tcagtggaaggcacggcaatctatttaccaggacctgatcgctgcaaaatgaacccgtgc
cttaacggaggcacctgttatcctactgaaacttcctacgtatgcacctgtgtgccagga
tacagcggagaccagtgtgaacttgattttgatgaatgtcactctaatccctgtcgtaat
ggagccacttgtgttgatggttttaacacattcaggtgcctctgccttccaagttatgtt
ggtgcactttgtgagcaagataccgagacatgtgactatggctggcacaaattccaaggg
cagtgctacaaatactttgcccatcgacgcacatgggatgcagctgaacgggaatgccgt
ctgcagggtgcccatctcacaagcatcctgtctcacgaagaacaaatgtttgttaatcgt
gtgggccatgattatcagtggataggcctcaatgacaagatgtttgagcatgacttccgt
tggactgatggcagcacactgcaatacgagaattggagacccaaccagccagacagcttc
ttttctgctggagaagactgtgttgtaatcatttggcatgagaatggccagtggaatgat
gttccctgcaattaccatctcacctatacgtgcaagaaaggaacagtcgcttgcggccag
ccccctgttgtagaaaatgccaagacctttggaaagatgaaacctcgttatgaaatcaac
tccctgattagataccactgcaaagatggtttcattcaacgtcaccttccaactatccgg
tgcttaggaaatggaagatgggctatacctaaaattacctgcatgaaccttccttgttta
ggagttgggaactggttacttacactcgaaatagacaggaaagcccccttgaatatcctg
aatgccactgaaagatgccgagttgacctgtggagggtgattggggcaaggcaggattgt
cagaccacagccaacaaaggcagagcaggtgtcctgccttatacctggaggataggaatg
ttaacatacagaggcaaagaagagtcggactag

>gi568815593r:83541499_83773523|GENSCAN_predicted_peptide_2|651_aa
MGKGRLEIGEDQEGQDDSESPGGGSPRGLGFIFKTIAPLAATRATRIGHPGGRTPRAGSS
AHRPPALSARAPVPAASPAAWLPLRTPWTRPSSCPTSSSTYDSLSPYGPRNPLPNPRHSP
SGGGGLKKPAVPPAPPRRGRRLEPGARPRIPARPQRSATPGPARCNSGTACVSPPPWPRA
PRACLLVLSPRASPAPSSRLLQQPFASCDHSTDPLSHPFWTDPGLMRVRVREIFSLPLVL
SSFIIEGFGLIFCMFLVLEYLLKFLGLNRQFSELLALNASAQVFEQALVKKILWAIKMKS
LLLLVLISICWADHLSDNYTLDHDRAIHIQAENGPHLLVEAEQAKVFSHRGGNVTLPCKF
YRDPTAFGSGIHKIRIKWTKLTSDYLKEVDVFVSMGYHKKTYGGYQGRVFLKGGSDSDAS
LVITDLTLEDYGRYKCEVIEGLEDDTVVVALDLQGVVFPYFPRLGRYNLNFHEAQQACLD
QDAVIASFDQLYDAWRGGLDWCNAGWLSDGSVQYPITKPREPCGGQNTVPGVRNYGFWDK
DKSRYDVFCFTSNFNGRFYYLIHPTKLTYDEAVQACLNDGAQIAKVGQIFAAWKILGYDR
CDAGWLADGSVRYPISRPRRRCSPTEAAVRFVGFPDKKHKLYGVYCFRAYN

>gi568815593r:83541499_83773523|GENSCAN_predicted_CDS_2|1956_bp
atggggaagggaaggctggaaataggggaggatcaggagggacaggatgactcagagagt
ccaggaggaggcagtccccgtggcttaggctttatctttaagacaatagcgccgctcgcc
gccacccgcgcgactcggatcgggcatcccggcggccgcaccccgcgcgctggctcatct
gcacaccggccacctgcattgtcggccagagcccccgtcccggcggcttccccagcagct
tggctgcccctcaggacgccctggacccgcccatcctcctgccccactagctcatcgact
tacgactccctcagtccctacggcccacggaaccctctccccaacccgcgccacagcccg
agcggcggcggcggccttaagaagcccgcagtcccgcccgcgccgccccgccggggccgg
aggttggagccgggagcacggccgcgaatccccgcacgtccccagcgctccgcgacaccg
ggccctgctcgctgcaactcggggacggcctgcgtctcgcctccaccctggccgcgggcc
cctcgagcttgtttgcttgtcctcagtcccagggccagccccgctccctcctcccggctg
ctccaacagccgtttgcttcctgcgatcattccacagaccccttgtcccatcccttctgg
acagacccaggactgatgagggttcgggttcgggagattttctctttaccactggtttta
agcagtttcattattgagggttttggtttaattttctgcatgtttcttgtgctagaatat
ttgctgaaattcttgggtctgaaccgtcaattttcagaactcttggctctcaacgcctca
gctcaagtttttgaacaggctctagtgaagaagattctttgggctataaagatgaagagt
ctacttcttctggtgctgatttcaatctgctgggctgatcatctttcagacaactatact
ctggatcatgacagagctattcacatccaagcagaaaatggcccccatctacttgtggaa
gcagagcaagccaaggtgttttcacacagaggtggcaatgttacactgccatgtaaattt
tatcgagaccctacagcatttggctcaggaatccataaaatccgaattaagtggaccaag
ctaacttcggattacctcaaggaagtggatgtttttgtttccatgggataccacaaaaaa
acctatggaggctaccagggtagagtgtttctgaagggaggcagtgatagtgatgcttct
ctggtcatcacagacctcactctggaagattatgggagatataagtgtgaggtgattgaa
ggattagaagatgatactgttgtggtagcactggacttacaaggtgtggtattcccttac
tttccacgactggggcgctacaatctcaattttcacgaggcgcagcaggcgtgtctggac
caggatgctgtgatcgcctccttcgaccagctgtacgacgcctggcggggcgggctggac
tggtgcaatgccggctggctcagtgatggctctgtgcaatatcccatcacaaagcccaga
gagccctgtggggggcagaacacagtgcccggagtcaggaactacggattttgggataaa
gataaaagcagatatgatgttttctgttttacatccaatttcaatggccgtttttactat
ctgatccaccccaccaaactgacctatgatgaagcggtgcaagcttgtctcaatgatggt
gctcagattgcaaaagtgggccagatatttgctgcctggaaaattctcggatatgaccgc
tgtgatgcgggctggttggcggatggcagcgtccgctaccccatctctaggccaagaagg
cgctgcagtcctactgaggctgcagtgcgcttcgtgggtttcccagataaaaagcataag
ctgtatggtgtctactgcttcagagcatacaactga

>gi568815593r:83541499_83773523|GENSCAN_predicted_peptide_3|464_aa
MDEAGNHHSQQTYTGTENQTLHVLTHKWQLNNENTWTQGGKHHTPGPVRGWGSRGGITLG
EMPNVDDGLMGAANHHETGSILLQSVELRDLWNFELERDNSGYLAENISKRQSIEEEAEH
KSLGNLQPGDAIEKKNPFSGEKFKPAEEICIDNKQPNVNLQDNGENVSRACQRPSRQPLV
SQPRDLVSCFLAAPTVAKRGQGRWDAVKHLEAVQSSLASLGLVGQHALHSTPEDAAGDLE
VVGASRRVGVHPLVEESQVLQLVSAETARNVDAFAAYDHRLPAQQYLFSHDGRQAAQEMA
STIKHQDLHLRHLRQPLGKPPLVIPKQTESGVDLQQTPADLQKRGLTVRRKTNKQKATAS
TSTKRMTMQKPYLKVTNIKDQRRRIVTNSSKLKEHVLTQCKEAKNLNKRLQELLTRITSL
EKNINDLMELKATARELCEADTSMNNRIIKWKKEYQRLKMNLMK

>gi568815593r:83541499_83773523|GENSCAN_predicted_CDS_3|1395_bp
atggatgaagctggaaaccatcattctcagcaaacttacacaggaacagaaaaccaaaca
ctgcatgttctcactcataagtggcagctgaacaatgagaacacatggacacagggaggg
aagcatcacacaccggggcctgtcagggggtgggggtctagaggagggataacattagga
gaaatgcctaatgtagatgacggattgatgggtgcagcaaaccaccatgagactggcagc
attttgctccagtctgtggaactgagagatctgtggaactttgaacttgagagagataat
tcagggtatctagcggaaaatatttctaagaggcaaagcattgaagaggaagcagaacat
aaaagtttgggaaatttgcagcctggtgatgcaatagaaaagaaaaacccattttctggg
gagaaattcaagcctgctgaagagatttgcatagataacaagcagcctaatgttaatctc
caagacaatggggaaaatgtctccagggcatgtcagagaccttcaaggcagccccttgta
tcacagcctagggacttggtttcctgctttctagcagctccaactgtggctaaaaggggc
caagggcggtgggatgccgtcaaacaccttgaggcggtccagagcagcctggcctcactt
ggtcttgtggggcagcatgccttgcacagtacgccagaagatgcggctggggacctggaa
gtggtaggggcgtcgagaagggttggtgttcatccgcttgtggaggaaagccaggtactt
caacttgtttctgcagaaactgccagaaatgttgatgccttcgcagcttacgaccaccgc
cttccggcccagcagtacctgtttagccacgatggccgccaggcggcccaggagatggcc
tcaaccatcaagcaccaggacctgcacctccgccatcttcggcagccgcttgggaaacct
ccactggtgatacccaagcaaacagagtctggagtggacctccagcaaactcctgcagac
ctgcagaagaggggcctgactgttagaaggaaaactaacaaacagaaagcaacggcatca
acatcaacaaaaaggatgaccatgcaaaaaccttatctgaaggtcaccaacatcaaagac
caaagaaggaggatagtaacaaactcttccaagctaaaggagcatgttctaacccagtgc
aaggaagctaagaacctgaataaaaggttacaggaactgctaactagaataaccagttta
gagaagaacataaatgacctgatggagctgaaagccacagcacgagaactttgtgaagca
gatacaagtatgaataacagaatcatcaagtggaagaaagaatatcagagattgaagatg
aacttaatgaaataa

>gi568815593r:83541499_83773523|GENSCAN_predicted_peptide_4|239_aa
MLPDFKLYYKATVTKKAWYWYQNRYIDQYNRTEASEITLHIYNHLICDKPDKSKQWRKDF
LFNKWCWKNLLAICRKLKLDPFLTPYTKSNSRWIKDLNLRPKTIKTLEENLGNTIQDIGM
GKDFMTKTPKAIATKARIDKWDLIKLKSFCTAKETIIRVNRQPTQWEKMFAIYPSDKGLI
STIHKQLKQIYKEKTNNPIKKWAKDMKRHVSQEDIYVANKHMKKAHYHWSLEKRKSKPL

>gi568815593r:83541499_83773523|GENSCAN_predicted_CDS_4|720_bp
atgctacctgacttcaaactatactacaaggctacagtaaccaaaaaagcatggtactgg
taccaaaacagatatatagaccaatacaacagaacagaagcctcagaaataacactgcac
atctacaaccatctgatctgtgacaaacctgacaaaagcaagcaatggagaaaagatttc
ctatttaataaatggtgttggaaaaacttgctagccatatgcagaaaactgaaattggac
cccttccttacaccttatacaaaaagtaactcaagatggattaaagatttaaacctacga
cctaaaaccataaaaaccctagaagaaaacctaggcaataccattcaggacataggcatg
ggcaaagacttcatgactaaaacaccaaaagcaattgcaacaaaagccagaattgacaaa
tgggatctaattaaactaaagagcttctgcacagcaaaagaaactatcatcagagtaaac
aggcaacctacacaatgggagaaaatgtttgcaatctatccatctgacaaagggctaata
tccacaatccacaagcaacttaaacaaatttacaaggagaaaacaaacaaccccattaaa
aagtgggcaaaggatatgaagagacacgtctcacaagaagacatttatgtggccaacaaa
cacatgaaaaaagctcattatcactggtcattagagaaacgcaaatcaaaaccactatga