Result of FASTA (ccds) for pF1KB5192
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB5192, 461 aa
  1>>>pF1KB5192 461 - 461 aa - 461 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.1736+/-0.000903; mu= 17.6927+/- 0.054
 mean_var=57.4696+/-11.875, 0's: 0 Z-trim(104.3): 33  B-trim: 0 in 0/49
 Lambda= 0.169182
 statistics sampled from 7802 (7817) to 7802 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.592), E-opt: 0.2 (0.24), width:  16
 Scan time:  2.720

The best scores are:                                      opt bits E(32554)
CCDS14299.1 PORCN gene_id:64840|Hs108|chrX         ( 461) 3130 772.5       0
CCDS14297.1 PORCN gene_id:64840|Hs108|chrX         ( 456) 3078 759.8       0
CCDS14298.1 PORCN gene_id:64840|Hs108|chrX         ( 455) 3067 757.1 8.3e-219
CCDS14296.1 PORCN gene_id:64840|Hs108|chrX         ( 450) 1567 391.0 1.3e-108


>>CCDS14299.1 PORCN gene_id:64840|Hs108|chrX              (461 aa)
 initn: 3130 init1: 3130 opt: 3130  Z-score: 4124.7  bits: 772.5 E(32554):    0
Smith-Waterman score: 3130; 100.0% identity (100.0% similar) in 461 aa overlap (1-461:1-461)

               10        20        30        40        50        60
pF1KB5 MATFSRQEFFQQLLQGCLLPTAQQGLDQIWLLLAICLACRLLWRLGLPSYLKHASTVAGG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 MATFSRQEFFQQLLQGCLLPTAQQGLDQIWLLLAICLACRLLWRLGLPSYLKHASTVAGG
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 FFSLYHFFQLHMVWVVLLSLLCYLVLFLCRHSSHRGVFLSVTILIYLLMGEMHMVDTVTW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 FFSLYHFFQLHMVWVVLLSLLCYLVLFLCRHSSHRGVFLSVTILIYLLMGEMHMVDTVTW
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB5 HKMRGAQMIVAMKAVSLGFDLDRGEVGTVPSPVEFMGYLYFVGTIVFGPWISFHSYLQAV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 HKMRGAQMIVAMKAVSLGFDLDRGEVGTVPSPVEFMGYLYFVGTIVFGPWISFHSYLQAV
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB5 QGRPLSCRWLQKVARSLALALLCLVLSTCVGPYLFPYFIPLNGDRLLRNKKRKARGTMVR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 QGRPLSCRWLQKVARSLALALLCLVLSTCVGPYLFPYFIPLNGDRLLRNKKRKARGTMVR
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB5 WLRAYESAVSFHFSNYFVGFLSEATATLAGAGFTEEKDHLEWDLTVSKPLNVELPRSMVE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 WLRAYESAVSFHFSNYFVGFLSEATATLAGAGFTEEKDHLEWDLTVSKPLNVELPRSMVE
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB5 VVTSWNLPMSYWLNNYVFKNALRLGTFSAVLVTYAASALLHGFSFHLAAVLLSLAFITYV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 VVTSWNLPMSYWLNNYVFKNALRLGTFSAVLVTYAASALLHGFSFHLAAVLLSLAFITYV
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB5 EHVLRKRLARILSACVLSKRCPPDCSHQHRLGLGVRALNLLFGALAIFHLAYLGSLFDVD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 EHVLRKRLARILSACVLSKRCPPDCSHQHRLGLGVRALNLLFGALAIFHLAYLGSLFDVD
              370       380       390       400       410       420

              430       440       450       460 
pF1KB5 VDDTTEEQGYGMAYTVHKWSELSWASHWVTFGCWIFYRLIG
       :::::::::::::::::::::::::::::::::::::::::
CCDS14 VDDTTEEQGYGMAYTVHKWSELSWASHWVTFGCWIFYRLIG
              430       440       450       460 

>>CCDS14297.1 PORCN gene_id:64840|Hs108|chrX              (456 aa)
 initn: 1610 init1: 1610 opt: 3078  Z-score: 4056.2  bits: 759.8 E(32554):    0
Smith-Waterman score: 3078; 98.9% identity (98.9% similar) in 461 aa overlap (1-461:1-456)

               10        20        30        40        50        60
pF1KB5 MATFSRQEFFQQLLQGCLLPTAQQGLDQIWLLLAICLACRLLWRLGLPSYLKHASTVAGG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 MATFSRQEFFQQLLQGCLLPTAQQGLDQIWLLLAICLACRLLWRLGLPSYLKHASTVAGG
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 FFSLYHFFQLHMVWVVLLSLLCYLVLFLCRHSSHRGVFLSVTILIYLLMGEMHMVDTVTW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 FFSLYHFFQLHMVWVVLLSLLCYLVLFLCRHSSHRGVFLSVTILIYLLMGEMHMVDTVTW
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB5 HKMRGAQMIVAMKAVSLGFDLDRGEVGTVPSPVEFMGYLYFVGTIVFGPWISFHSYLQAV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 HKMRGAQMIVAMKAVSLGFDLDRGEVGTVPSPVEFMGYLYFVGTIVFGPWISFHSYLQAV
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB5 QGRPLSCRWLQKVARSLALALLCLVLSTCVGPYLFPYFIPLNGDRLLRNKKRKARGTMVR
       :::::::::::::::::::::::::::::::::::::::::::::::::::::::     
CCDS14 QGRPLSCRWLQKVARSLALALLCLVLSTCVGPYLFPYFIPLNGDRLLRNKKRKAR-----
              190       200       210       220       230          

              250       260       270       280       290       300
pF1KB5 WLRAYESAVSFHFSNYFVGFLSEATATLAGAGFTEEKDHLEWDLTVSKPLNVELPRSMVE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 WLRAYESAVSFHFSNYFVGFLSEATATLAGAGFTEEKDHLEWDLTVSKPLNVELPRSMVE
         240       250       260       270       280       290     

              310       320       330       340       350       360
pF1KB5 VVTSWNLPMSYWLNNYVFKNALRLGTFSAVLVTYAASALLHGFSFHLAAVLLSLAFITYV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 VVTSWNLPMSYWLNNYVFKNALRLGTFSAVLVTYAASALLHGFSFHLAAVLLSLAFITYV
         300       310       320       330       340       350     

              370       380       390       400       410       420
pF1KB5 EHVLRKRLARILSACVLSKRCPPDCSHQHRLGLGVRALNLLFGALAIFHLAYLGSLFDVD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 EHVLRKRLARILSACVLSKRCPPDCSHQHRLGLGVRALNLLFGALAIFHLAYLGSLFDVD
         360       370       380       390       400       410     

              430       440       450       460 
pF1KB5 VDDTTEEQGYGMAYTVHKWSELSWASHWVTFGCWIFYRLIG
       :::::::::::::::::::::::::::::::::::::::::
CCDS14 VDDTTEEQGYGMAYTVHKWSELSWASHWVTFGCWIFYRLIG
         420       430       440       450      

>>CCDS14298.1 PORCN gene_id:64840|Hs108|chrX              (455 aa)
 initn: 3075 init1: 1566 opt: 3067  Z-score: 4041.7  bits: 757.1 E(32554): 8.3e-219
Smith-Waterman score: 3067; 98.5% identity (98.7% similar) in 461 aa overlap (1-461:1-455)

               10        20        30        40        50        60
pF1KB5 MATFSRQEFFQQLLQGCLLPTAQQGLDQIWLLLAICLACRLLWRLGLPSYLKHASTVAGG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 MATFSRQEFFQQLLQGCLLPTAQQGLDQIWLLLAICLACRLLWRLGLPSYLKHASTVAGG
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 FFSLYHFFQLHMVWVVLLSLLCYLVLFLCRHSSHRGVFLSVTILIYLLMGEMHMVDTVTW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 FFSLYHFFQLHMVWVVLLSLLCYLVLFLCRHSSHRGVFLSVTILIYLLMGEMHMVDTVTW
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB5 HKMRGAQMIVAMKAVSLGFDLDRGEVGTVPSPVEFMGYLYFVGTIVFGPWISFHSYLQAV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 HKMRGAQMIVAMKAVSLGFDLDRGEVGTVPSPVEFMGYLYFVGTIVFGPWISFHSYLQAV
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB5 QGRPLSCRWLQKVARSLALALLCLVLSTCVGPYLFPYFIPLNGDRLLRNKKRKARGTMVR
       ::::::::::::::::::::::::::::::::::::::::::::::::      .:::::
CCDS14 QGRPLSCRWLQKVARSLALALLCLVLSTCVGPYLFPYFIPLNGDRLLR------KGTMVR
              190       200       210       220             230    

              250       260       270       280       290       300
pF1KB5 WLRAYESAVSFHFSNYFVGFLSEATATLAGAGFTEEKDHLEWDLTVSKPLNVELPRSMVE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 WLRAYESAVSFHFSNYFVGFLSEATATLAGAGFTEEKDHLEWDLTVSKPLNVELPRSMVE
          240       250       260       270       280       290    

              310       320       330       340       350       360
pF1KB5 VVTSWNLPMSYWLNNYVFKNALRLGTFSAVLVTYAASALLHGFSFHLAAVLLSLAFITYV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 VVTSWNLPMSYWLNNYVFKNALRLGTFSAVLVTYAASALLHGFSFHLAAVLLSLAFITYV
          300       310       320       330       340       350    

              370       380       390       400       410       420
pF1KB5 EHVLRKRLARILSACVLSKRCPPDCSHQHRLGLGVRALNLLFGALAIFHLAYLGSLFDVD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 EHVLRKRLARILSACVLSKRCPPDCSHQHRLGLGVRALNLLFGALAIFHLAYLGSLFDVD
          360       370       380       390       400       410    

              430       440       450       460 
pF1KB5 VDDTTEEQGYGMAYTVHKWSELSWASHWVTFGCWIFYRLIG
       :::::::::::::::::::::::::::::::::::::::::
CCDS14 VDDTTEEQGYGMAYTVHKWSELSWASHWVTFGCWIFYRLIG
          420       430       440       450     

>>CCDS14296.1 PORCN gene_id:64840|Hs108|chrX              (450 aa)
 initn: 3043 init1: 1566 opt: 1567  Z-score: 2063.1  bits: 391.0 E(32554): 1.3e-108
Smith-Waterman score: 3025; 97.4% identity (97.6% similar) in 461 aa overlap (1-461:1-450)

               10        20        30        40        50        60
pF1KB5 MATFSRQEFFQQLLQGCLLPTAQQGLDQIWLLLAICLACRLLWRLGLPSYLKHASTVAGG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 MATFSRQEFFQQLLQGCLLPTAQQGLDQIWLLLAICLACRLLWRLGLPSYLKHASTVAGG
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 FFSLYHFFQLHMVWVVLLSLLCYLVLFLCRHSSHRGVFLSVTILIYLLMGEMHMVDTVTW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 FFSLYHFFQLHMVWVVLLSLLCYLVLFLCRHSSHRGVFLSVTILIYLLMGEMHMVDTVTW
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB5 HKMRGAQMIVAMKAVSLGFDLDRGEVGTVPSPVEFMGYLYFVGTIVFGPWISFHSYLQAV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 HKMRGAQMIVAMKAVSLGFDLDRGEVGTVPSPVEFMGYLYFVGTIVFGPWISFHSYLQAV
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB5 QGRPLSCRWLQKVARSLALALLCLVLSTCVGPYLFPYFIPLNGDRLLRNKKRKARGTMVR
       ::::::::::::::::::::::::::::::::::::::::::::::::           .
CCDS14 QGRPLSCRWLQKVARSLALALLCLVLSTCVGPYLFPYFIPLNGDRLLR-----------K
              190       200       210       220                    

              250       260       270       280       290       300
pF1KB5 WLRAYESAVSFHFSNYFVGFLSEATATLAGAGFTEEKDHLEWDLTVSKPLNVELPRSMVE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 WLRAYESAVSFHFSNYFVGFLSEATATLAGAGFTEEKDHLEWDLTVSKPLNVELPRSMVE
     230       240       250       260       270       280         

              310       320       330       340       350       360
pF1KB5 VVTSWNLPMSYWLNNYVFKNALRLGTFSAVLVTYAASALLHGFSFHLAAVLLSLAFITYV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 VVTSWNLPMSYWLNNYVFKNALRLGTFSAVLVTYAASALLHGFSFHLAAVLLSLAFITYV
     290       300       310       320       330       340         

              370       380       390       400       410       420
pF1KB5 EHVLRKRLARILSACVLSKRCPPDCSHQHRLGLGVRALNLLFGALAIFHLAYLGSLFDVD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 EHVLRKRLARILSACVLSKRCPPDCSHQHRLGLGVRALNLLFGALAIFHLAYLGSLFDVD
     350       360       370       380       390       400         

              430       440       450       460 
pF1KB5 VDDTTEEQGYGMAYTVHKWSELSWASHWVTFGCWIFYRLIG
       :::::::::::::::::::::::::::::::::::::::::
CCDS14 VDDTTEEQGYGMAYTVHKWSELSWASHWVTFGCWIFYRLIG
     410       420       430       440       450




461 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sat Nov  5 06:26:29 2016 done: Sat Nov  5 06:26:29 2016
 Total Scan time:  2.720 Total Display time:  0.020

Function used was FASTA [36.3.4 Apr, 2011]
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