GENSCAN 1.0	Date run:  5-Nov-116	Time: 22:31:58

Sequence gi568815591r:26093305_26297734 : 204430 bp : 43.59% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   4881   5098  218  0  2   44   95   102 0.711   4.65
 1.02 Intr +   8311   8446  136  2  1   56   81    88 0.566   4.53
 1.03 Intr +   9175   9247   73  1  1   66  101    36 0.559   2.11
 1.04 Intr +  11740  11775   36  0  0  102   86     9 0.302   0.56
 1.05 Intr +  29633  29834  202  1  1   25  108    88 0.043   3.36
 1.06 Term +  30798  30913  116  1  2   58   44   187 0.593  10.03
 1.07 PlyA +  33481  33486    6                               1.05

 2.00 Prom +  56403  56442   40                              -4.16
 2.01 Init +  59195  59764  570  1  0   92   92   816 0.138  75.49
 2.02 Intr +  84639  84818  180  2  0   52   99   164 0.993  13.96
 2.03 Term +  91229  92479 1251  1  0  125   54   321 0.893  23.99
 2.04 PlyA +  92964  92969    6                               1.05

 3.10 PlyA -  94305  94300    6                               1.05
 3.09 Term -  97156  97094   63  1  0   98   48    79 0.426   2.79
 3.08 Intr - 100390 100271  120  1  0   37   75   160 0.248  10.29
 3.07 Intr - 102605 102543   63  2  0   85   78    88 0.251   6.41
 3.06 Intr - 103177 103097   81  1  0   23  105    88 0.239   3.83
 3.05 Intr - 103354 103317   38  2  2   52   63    27 0.144  -5.42
 3.04 Intr - 103713 103503  211  0  1   70   92   227 0.878  19.79
 3.03 Intr - 104157 104011  147  0  0   42   99    45 0.493   1.43
 3.02 Intr - 104428 104318  111  1  0   86   68    68 0.658   5.18
 3.01 Init - 107273 107268    6  2  0   94   82     0 0.289   0.87
 3.00 Prom - 109346 109307   40                              -5.86

 4.00 Prom + 110361 110400   40                              -6.26
 4.01 Init + 113070 113206  137  2  2   54   52   140 0.678   6.61
 4.02 Intr + 115089 115251  163  0  1   10   87   132 0.959   5.28
 4.03 Intr + 118358 118452   95  1  2   48  101    76 0.909   3.66
 4.04 Intr + 151515 151670  156  0  0   88   18    99 0.165   2.03
 4.05 Intr + 152066 152299  234  2  0   74   53   131 0.073   5.00
 4.06 Term + 154766 154973  208  2  1   36   52   136 0.206   1.61
 4.07 PlyA + 155287 155292    6                               1.05

 5.04 PlyA - 156328 156323    6                               1.05
 5.03 Term - 156766 156610  157  0  1   29   36   149 0.007   1.21
 5.02 Intr - 169906 169843   64  2  1   96   54    34 0.038  -1.42
 5.01 Init - 174115 174079   37  1  1   76  106     8 0.446   1.57
 5.00 Prom - 179393 179354   40                              -1.66

 6.05 PlyA - 182227 182222    6                               1.05
 6.04 Term - 183047 182857  191  0  2   44   38   161 0.429   4.31
 6.03 Intr - 198612 198527   86  2  2   58   85    43 0.204   0.46
 6.02 Intr - 199036 198894  143  1  2   80   45    83 0.750   2.35
 6.01 Init - 202140 202129   12  0  0   97   76     9 0.379   0.72

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl +  59195  59965  771  1  0   92   49   871 0.823  77.66
S.002 Term + 118778 118904  127  2  1  104   32    51 0.851  -1.14


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815591r:26093305_26297734|GENSCAN_predicted_peptide_1|260_aa
XTGSPTSQETAQFKANQNKPLVRGKGSPHEAIRYISAAHREWKPAILTSAIRSFCSTWLV
FTSKNFPKLVTQHGSTIAGNGQSSDETQVQGAAWKSDSRGTKRQIPTWILAEGNNAGAQL
DIPGPTIPAPNCSLKVPQSWSTTPSMPSSLGKAYWLLACYWALVETEHWLWVIKSPCKPE
LPVMNWVLSDPSSHKVGGAQQHSINKWKWYIRNRARAGPEGTTLPLTKALTLWLKKYSNV
LMLVEFTGLTMFPDILKQLE

>gi568815591r:26093305_26297734|GENSCAN_predicted_CDS_1|783_bp
nncactggcagccccacgtcccaggaaactgctcagttcaaggcaaaccagaacaaacca
ttggtcagaggaaaaggaagcccacatgaggccataagatatatttcagctgcccatcga
gaatggaagccagcaatcctgacatcagccattaggtcattttgttctacctggctggtg
ttcacctccaagaactttcccaagcttgtgacccaacatggaagtacgatagcaggaaac
gggcagagctcagatgagacccaagtccagggtgcagcctggaagtctgattccagagga
acaaagagacaaataccaacgtggattctggcagaggggaacaatgcaggtgcccaactt
gacatcccaggcccaaccatccctgctcctaattgttccctgaaggtgccccagagctgg
agtaccacgcccagcatgccctcctcactagggaaggcctactggctcttggcctgttac
tgggccttggtggaaactgaacattggctatgggtcatcaagtcaccatgtaaacctgaa
ctgcctgtcatgaactgggtgctttctgacccatctagccataaagtgggtggtgcacag
cagcattccatcaacaaatggaagtggtatatacgtaatcgggctcgagcaggtcctgaa
ggcacaacattgcctctgaccaaggcactcactttatggctaaagaagtacagcaacgtg
ctcatgctcgtggaatttaccggtcttaccatgttccccgacatcctgaagcagctggaa
tga

>gi568815591r:26093305_26297734|GENSCAN_predicted_peptide_2|666_aa
MKHLKRWWSAGGGLLHLTLLLSLAGLRVDLDLYLLLPPPTLLQDELLFLGGPASSAYALS
PFSASGGWGRAGHLHPKGRELDPAAPPEGQLLREVRALGVPFVPRTSVDAWLVHSVAAGS
ADEAHGLLGAAAASSTGGAGASVDGGSQAVQGGGGDPRAARSGPLDAGEEEKAPAEPTAQ
VPDAGGCASEENGVLREKHEAVDHSSQHEENEERVSAQKENSLQQNDDDENKIAEKPDWE
AEKTTESRNEGISLGDIPLPGSISDGMNSSAHYHVNFSQAISQDVNLHEAILLCPNNTFR
RDPTARTSQSQEPFLQLNSHTTNPEQTLPGTNLTGFLSPVDNHMRNLTSQDLLYDLDINI
FDEINLMSLATEDNFDPIDVSQLFDEPDSDSGLSLDSSHNNTSVIKSNSSHSVCDEGAIG
YCTDHESSSHHDLEGAVGGYYPEPSKLCHLDQSDSDFHGDLTFQHVFHNHTYHLQPTAPE
STSEPFPWPGKSQKIRSRYLEDTDRNLSRDEQRAKALHIPFSVDEIVGMPVDSFNSMLSR
YYLTDLQVSLIRDIRRRGKNKVAAQNCRKRKLDIILNLEDDVCNLQAKKETLKREQAQCN
KAINIMKQKLHDLYHDIFSRLRDDQGRPVNPNHYALQCTHDGSILIVPKELVASGHKKET
QKGKRK

>gi568815591r:26093305_26297734|GENSCAN_predicted_CDS_2|2001_bp
atgaagcacctgaagcggtggtggtcggccggcggcggcctcctgcacctcaccctcctg
ctgagcttggcggggctccgcgtagacctagatctttacctgctgctgccgccgcccacc
ctgctgcaggacgagctgctgttcctgggcggcccggccagctccgcctacgcgctcagc
cccttctcggcctcgggagggtgggggcgcgcgggccacttgcaccccaagggccgggag
ctggaccctgccgcgccgcccgagggccagctgctccgggaggtgcgcgcgctcggggtc
cccttcgtccctcgcaccagcgtggatgcatggctggtgcacagcgtggctgccgggagc
gcggacgaggcccacgggctgctcggcgccgccgccgcctcgtccaccggaggagccggc
gccagcgtggacggcggcagccaggctgtgcaggggggcggcggggacccccgagcggct
cggagtggccccttggacgccggggaagaggagaaggcacccgcggaaccgacggctcag
gtgccggacgctggcggatgtgcgagcgaggagaatggggtactaagagaaaagcacgaa
gctgtggatcatagttcccagcatgaggaaaatgaagaaagggtgtcagcccagaaggag
aactcacttcagcagaatgatgatgatgaaaacaaaatagcagagaaacctgactgggag
gcagaaaagaccactgaatctagaaatgagggcatctcattgggagatattcctcttcca
ggcagtatcagtgatggcatgaattcttcagcacattatcatgtaaacttcagccaggct
ataagtcaggatgtgaatcttcatgaggccatcttgctttgtcccaacaatacatttaga
agagatccaacagcaaggacttcacagtcacaagaaccatttctgcagttaaattctcat
accaccaatcctgagcaaacccttcctggaactaatttgacaggatttctttcaccggtt
gacaatcatatgaggaatctaacaagccaagacctactgtatgaccttgacataaatata
tttgatgagataaacttaatgtcattggccacagaagacaactttgatccaatcgatgtt
tctcagctttttgatgaaccagattctgattctggcctttctttagattcaagtcacaat
aatacctctgtcatcaagtctaattcctctcactctgtgtgtgatgaaggtgctataggt
tattgcactgaccatgaatctagttcccatcatgacttagaaggtgctgtaggtggctac
tacccagaacccagtaagctttgtcacttggatcaaagtgattctgatttccatggagat
cttacatttcaacacgtatttcataaccacacttaccacttacagccaactgcaccagaa
tctacttctgaaccttttccgtggcctgggaagtcacagaagataaggagtagatacctt
gaagacacagatagaaacttgagccgtgatgaacagcgtgctaaagctttgcatatccct
ttttctgtagatgaaattgtcggcatgcctgttgattctttcaatagcatgttaagtaga
tattatctgacagacctacaagtctcacttatccgtgacatcagacgaagagggaaaaat
aaagttgctgcgcagaactgtcgtaaacgcaaattggacataattttgaatttagaagat
gatgtatgtaacttgcaagcaaagaaggaaactcttaagagagagcaagcacaatgtaac
aaagctattaacataatgaaacagaaactgcatgacctttatcatgatatttttagtaga
ttaagagatgaccaaggtaggccagtcaatcccaaccactatgctctccagtgtacccat
gatggaagtatcttgatagtacccaaagaactggtggcctcaggccacaaaaaggaaacc
caaaagggaaagagaaagtga

>gi568815591r:26093305_26297734|GENSCAN_predicted_peptide_3|279_aa
MEREKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSM
AEVDAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYF
EEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEATLALGIHV
VAVEISDQDQEVTLEEDLMDMAVDVDLGMAIMGMEEDLEVAILEVAPVMEEEEEDMVVED
LDMATRVGATEVVMTTMEEEGVLLQVTNEEVVNHRVFKK

>gi568815591r:26093305_26297734|GENSCAN_predicted_CDS_3|840_bp
atggagagagaaaaggaacagttccgtaagctctttattggtggcttaagctttgaaacc
acagaagaaagtttgaggaactactacgaacaatggggaaagcttacagactgtgtggta
atgagggatcctgcaagcaaaagatcaagaggatttggttttgtaactttttcatccatg
gctgaggttgatgctgccatggctgcaagacctcattcaattgatgggagagtagttgag
ccaaaacgtgctgtagcaagagaggaatctggaaaaccaggggctcatgtaactgtgaag
aagctgtttgttggcggaattaaagaagatactgaggaacatcaccttagagattacttt
gaggaatatggaaaaattgataccattgagataattactgataggcagtctggaaagaaa
agaggctttggctttgttacttttgatgaccatgatcctgtggataaaatcgtattgcag
aaataccataccatcaatggtcataatgcagaagcaactttggctttggggattcacgtg
gtggcggtggaaatttcggaccaggaccaggaagtaactttagaggaggatctgatggat
atggcagtggacgtggatttggggatggctataatgggtatggaggaggacctggaggtg
gcaattttggaggtagccccggttatggaggaggaagaggaggatatggtggtggaggac
ctggatatggcaaccagggtgggggctacggaggtggttatgacaactatggaggaggaa
ggtgtcttgctgcaggtaactaatgaagaagtggtcaaccacagagtcttcaagaaataa

>gi568815591r:26093305_26297734|GENSCAN_predicted_peptide_4|330_aa
MGKKQNGKSKKVEEAEPEEFVVEKVLDRRVVNGKVEYFLKWKGFTDADNTWEPEENLDCP
ELIEAFLNSQKAGKEKDGTKRKSLSDSESDDSKSKKKRDAADKPRGFARGLDPERIIGAT
DSSGELMFLMKCPYLFLSTAFFNPESLLIVFSVAIFPAAIFPVSCIHFFSYTIPPQDNSS
IACTAAMKATGPDNAQSQVSPPGHAPSAEDPTGSRTVSSPCEDRPHPFLSWPTWISLALL
LKTDGALERMPQQLPSLHPSQGKLLQAAMLLQKVAIIHCRGHQTPDNPIIAGNALADQVA
KEVALQPVQDQFLSLSLFSPLYSSEEKEDF

>gi568815591r:26093305_26297734|GENSCAN_predicted_CDS_4|993_bp
atgggaaaaaaacagaatggaaagagtaaaaaagttgaagaggcagagcctgaagaattt
gtcgtggaaaaagtactagatcgacgtgtagtgaatgggaaagtggaatatttcctgaag
tggaagggatttacagatgctgacaatacttgggaacctgaagaaaatttagattgtcca
gaattgattgaagcgtttcttaactctcagaaagctggcaaagaaaaagatggtacaaaa
agaaaatctttatctgacagtgaatctgatgacagcaaatcaaagaagaaaagagatgct
gctgacaaaccaagaggatttgccagaggtcttgatcctgaaagaataattggtgccaca
gacagcagtggagaattgatgtttctcatgaaatgcccctaccttttcctctcaactgcc
ttctttaaccccgaaagcctcctcattgtcttctcagttgccatcttcccagccgccatc
ttcccagtcagctgtatccacttcttttcctacaccatcccccctcaggacaattctagt
attgcttgcactgcggcaatgaaggccactggtccagacaatgcccaaagccaggtaagc
ccaccaggccatgccccctctgcggaggaccccactggaagtcggactgtgagcagcccc
tgcgaggaccgcccccatcccttcctgagctggcctacttggatctcattggccttgctg
ctgaagactgacggtgccctggaacggatgccccagcaactaccatcgcttcatccaagc
caaggcaaactccttcaagctgccatgctcctgcagaaagttgccatcattcattgcaga
ggccaccaaaccccagacaatcctataatagctggaaatgcgctggcagatcaggtagcc
aaagaagtagctctacaacccgtgcaagaccagtttctgtccctgtcgctgttctctcct
ctttactcctcagaagaaaaggaggacttctga

>gi568815591r:26093305_26297734|GENSCAN_predicted_peptide_5|85_aa
MISERKEKNFLKSAHSELAVISEKKEIILIMLKSRSIVWIVWRLTVLSTRVLMAFSFYYQ
WDNTGEKQKEPNDEDYCPYQCFKSS

>gi568815591r:26093305_26297734|GENSCAN_predicted_CDS_5|258_bp
atgatatcagaaaggaaagagaaaaactttttgaaaagtgctcatagtgaattggcagta
atttcagagaagaaggagattattctcataatgcttaagagcaggagcatcgtctggatt
gtctggcggttaactgtactttcaacaagagttttaatggcttttagcttttattatcag
tgggataacacaggggagaaacagaaggagcccaatgatgaagattactgtccctaccag
tgctttaaatcctcctaa

>gi568815591r:26093305_26297734|GENSCAN_predicted_peptide_6|143_aa
MGDHPRIPGSTRSISPLYRADHFSLPGTPRLKRRRLLCSKPKGPKPLSSPQGGPAPALSA
SRPPVGAAPSASAASAQPSPGKSVQPSLILFTEMIYRFLAPVLSALLIRDPTRRPKEIQN
FAPEDSPHPCFDILNARKKEKSN

>gi568815591r:26093305_26297734|GENSCAN_predicted_CDS_6|432_bp
atgggtgaccacccaagaatccctggatcgacgcgctccatctccccgctctaccgcgct
gatcatttctccctgcccggcacacctcggctgaaaaggaggcggctcctctgctccaag
cccaagggacccaaacctctttccagcccgcaaggcggccccgcgcccgcgctcagcgcc
agccgtccgcctgtgggcgccgcgcctagtgcttccgccgcctccgcgcagcccagccca
gggaagtctgttcagccgtccctgatcctcttcacggagatgatatacagatttttggct
cctgtattgtcagcattgttgatcagggatcctaccagaagacccaaggaaatccagaat
tttgcaccagaggactcaccacatccttgcttcgacatcttgaatgccagaaagaaggaa
aaaagcaattga