GENSCAN 1.0	Date run:  5-Nov-116	Time: 06:17:34

Sequence gi568815597r:74606299_74824821 : 218523 bp : 37.36% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.09 Intr -    604    303  302  0  2   70   44   272 0.195  16.45
 1.08 Intr -   3353   3308   46  0  1  100   95   -14 0.078  -2.95
 1.07 Intr -  14616  14436  181  0  1  119   81   102 0.768  11.12
 1.06 Intr -  30140  30045   96  2  0   45   88    73 0.574   2.29
 1.05 Intr -  35161  35033  129  1  0   64  105    91 0.967   8.37
 1.04 Intr -  36800  36729   72  2  0   62  116    50 0.932   3.88
 1.03 Intr -  40494  40369  126  0  0   48   83    83 0.903   3.76
 1.02 Intr -  43017  42924   94  2  1   93  119    14 0.961   4.05
 1.01 Init -  48480  48368  113  0  2   71   74    63 0.387   2.93
 1.00 Prom -  51204  51165   40                              -6.25

 2.04 PlyA -  51221  51216    6                               1.05
 2.03 Term -  51976  51876  101  2  2   38   42   138 0.781   1.51
 2.02 Intr -  52559  52460  100  2  1   94   98    51 0.936   5.46
 2.01 Init -  52952  52890   63  2  0   97   89   -12 0.882   1.00
 2.00 Prom -  56544  56505   40                              -5.25

 3.00 Prom +  63172  63211   40                              -6.05
 3.01 Init +  65337  65380   44  2  2   74   63    30 0.642  -0.96
 3.02 Intr +  67124  67266  143  2  2  140   65    88 0.453  10.78
 3.03 Term +  67431  67555  125  1  2   90   44    89 0.618   2.27
 3.04 PlyA +  68734  68739    6                               1.05

 4.10 PlyA -  68831  68826    6                               1.05
 4.09 Term -  96371  96151  221  0  2   22   42   212 0.670   6.22
 4.08 Intr - 100159 100036  124  1  1   50   27   144 0.562   3.74
 4.07 Intr - 100696 100601   96  1  0   55   97    68 0.886   3.69
 4.06 Intr - 100906 100805  102  1  0   49   92    64 0.831   2.35
 4.05 Intr - 103949 103800  150  2  0  106   93   104 0.999  12.14
 4.04 Intr - 108332 108281   52  1  1   99   83    65 0.998   5.09
 4.03 Intr - 113074 112911  164  1  2   97   90   223 0.993  21.25
 4.02 Intr - 116972 116820  153  2  0   63   67   134 0.989   8.15
 4.01 Init - 118523 118413  111  2  0  108   75    98 0.965  10.76
 4.00 Prom - 119001 118962   40                              -8.95

 5.00 Prom + 119126 119165   40                              -6.05
 5.01 Init + 122854 122898   45  0  0   90   59    93 0.311   7.33
 5.02 Term + 126805 127026  222  0  0   85   49   166 0.701   8.33
 5.03 PlyA + 127873 127878    6                               1.05

 6.00 Prom + 127988 128027   40                             -14.16
 6.01 Init + 128098 128148   51  0  0   63   98    74 0.675   7.11
 6.02 Intr + 130244 130324   81  1  0   80  103    34 0.661   3.02
 6.03 Intr + 132392 132490   99  1  0   63   58   110 0.577   4.89
 6.04 Intr + 133760 133808   49  1  1   52   73    78 0.335   0.03
 6.05 Intr + 133859 134044  186  0  0   35   79   147 0.285   7.24
 6.06 Term + 134293 134750  458  2  2    8   41   228 0.244   4.40
 6.07 PlyA + 134895 134900    6                              -1.95

 7.07 PlyA - 134946 134941    6                              -4.04
 7.06 Term - 135226 134949  278  2  2   84   42   269 0.274  16.54
 7.05 Intr - 136332 135953  380  2  2  -38   48   252 0.212   2.28
 7.04 Intr - 136819 136542  278  1  2   54   68   140 0.246   3.99
 7.03 Intr - 137796 137653  144  0  0  103   83    53 0.372   5.86
 7.02 Intr - 137979 137975    5  1  2   87   94     0 0.392  -7.57
 7.01 Init - 138436 138277  160  1  1   84   89   125 0.780  12.23
 7.00 Prom - 149473 149434   40                              -2.25

 8.00 Prom + 149690 149729   40                              -5.45
 8.01 Init + 149935 150278  344  0  2   60   47   286 0.846  18.45
 8.02 Term + 150516 151179  664  0  1   79   38   303 0.884  16.75
 8.03 PlyA + 152745 152750    6                               1.05

 9.00 Prom + 156948 156987   40                              -1.95
 9.01 Sngl + 157636 157815  180  0  0   80   43   201 0.702   9.55
 9.02 PlyA + 158082 158087    6                               1.05

10.00 Prom + 159849 159888   40                              -5.85
10.01 Sngl + 159968 160138  171  1  0   18   44   248 0.820   7.98
10.02 PlyA + 160359 160364    6                               1.05

11.04 PlyA - 160793 160788    6                               1.05
11.03 Term - 167523 167408  116  1  2   73   33    64 0.015  -2.85
11.02 Intr - 185032 184943   90  2  0  102   93    26 0.036   3.55
11.01 Init - 195150 195066   85  0  1   66   65    89 0.556   5.43
11.00 Prom - 218256 218217   40                              -3.85


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597r:74606299_74824821|GENSCAN_predicted_peptide_1|387_aa
MGMIISSIMDCMSVSPQNSYVETLIPNVIVFGDEAFGRLLAAYNSLMDKHLAGYFNNTRI
RRHLLRSGLITRSGRILSEKEYKLNMMKRDHQKYIRECLAQAIFHKVLDMERYHQLEIKK
KLETLARKERIQRFKGEHTRRSVENNMPILSPHPPVGPKSNRGHSVLVDEGHSSPLALTA
PRPYTAPGNMQPPIRLQPLPSNPAVETVPKDSRRIHKTSLHSNAAITMIYLGKNVHLSSD
NPDFRDEIKVYQQHCGGENLCVYKGKLLEKGQVKVESDWFKWYRVRCIIAMGLDKKPSLP
KSRKEKSTEKGEELKKAEGKVRKEREYVIPKRNEIKENKTSVSAKFSAQEIKTGLKEVVT
AVEEMTSKGKPGQEVLEDDQENTLKYX

>gi568815597r:74606299_74824821|GENSCAN_predicted_CDS_1|1161_bp
atggggatgatcatatcttctattatggactgcatgtctgtgtctccccaaaattcatat
gttgaaaccctaatccccaatgtgatagtatttggagatgaggcctttgggaggttactt
gctgcatataatagccttatggataaacacctggctgggtattttaacaatacaaggata
aggcgtcatctcttaagatcaggactgatcacaagaagtggaagaatactttctgaaaaa
gaatataaactaaatatgatgaagcgggatcatcaaaaatatatccgggaatgcttagcc
caggcaatttttcataaagttcttgatatggagcgttaccatcagcttgaaataaaaaag
aaattggagaccttagctaggaaggagcgaatccagaggtttaagggagagcacacaaga
aggtctgttgaaaataacatgccaatcctgtctccccacccaccagttggcccaaagagt
aatcgtggccatagtgttctggttgatgaaggacattccagtccgttagcactgacagcc
cctcgaccatatactgctccaggaaatatgcagcctccaattcgattacagcctcttccc
agtaatcctgcagtagaaactgttccaaaggattcaagaaggattcataaaacatcctta
catagtaatgcagctattacaatgatctatttggggaaaaatgtgcacctatcttctgat
aatcctgacttccgggatgaaattaaagtttatcagcagcactgtggtggggaaaacctt
tgtgtctacaaaggcaaactacttgaaaaaggtcaggtaaaagttgagtcagactggttt
aaatggtacagggttaggtgcattattgcaatgggccttgacaaaaaaccgtctttgccg
aaatctaggaaagaaaagagcactgagaaaggagaggaactgaagaaggctgaggggaaa
gtgaggaaagagagagagtatgtgataccaaaaagaaatgagatcaaggagaacaaaacc
tctgtttcagccaaattttcagctcaagaaataaaaacagggctcaaagaagtggtaact
gctgtggaggaaatgacaagtaaaggaaaaccaggacaagaagtcttggaagacgaccag
gaaaatactttaaaatatgnn

>gi568815597r:74606299_74824821|GENSCAN_predicted_peptide_2|87_aa
MVLSYPWTFACGNPSSWSNPLMRKLSLIVSKQLVGTHRVQVSIEDLKLGISEGGAKMGKE
DKELGSGGEKEEQKEEEYLIENIQFYG

>gi568815597r:74606299_74824821|GENSCAN_predicted_CDS_2|264_bp
atggtactctcttatccctggacctttgcatgtggtaatccctcttcctggagcaatcct
cttatgaggaaattgagcttaatagtgagtaaacaacttgttggaactcatagagtacaa
gtgtcaatagaagatttaaaactgggtatttcagagggtggggctaagatgggaaaggag
gacaaggaattgggaagtggaggggaaaaggaagagcagaaggaggaggaatacctcata
gagaacattcagttttatggttaa

>gi568815597r:74606299_74824821|GENSCAN_predicted_peptide_3|103_aa
MRVTKNQHEWEDLISRREEEGQLAEAATCHSVEKLQLSLTQRGENGSFLQDPFWTPRQVR
RVASLLLREERGKRPGSGEAEALLEPSLRKLEVKPASTPFSGP

>gi568815597r:74606299_74824821|GENSCAN_predicted_CDS_3|312_bp
atgagggtaactaaaaaccagcatgagtgggaagatttaataagcaggagggaggaggag
gggcagctggctgaagccgccacctgccacagcgtggaaaagctccagttgtcacttacc
cagcggggtgagaatggctcatttttgcaggatcccttttggaccccgcggcaggtgcgg
agggtggcttccctgttgctaagggaggagagaggcaagcgcccagggtctggagaagcg
gaggcgctactggaaccgagcctgcggaagctggaagtgaagccagcttctacccctttt
tctgggccctga

>gi568815597r:74606299_74824821|GENSCAN_predicted_peptide_4|390_aa
MATGQKLMRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYS
RKPLLPYTPGSDVAGVIEAVGDNASAFKKGDRVFTSSTISGGYAEYALAADHTVYKLPEK
LDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTA
GTEEGQKIVLQNGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEMLANVNLSKDLSLLSHG
GRVIVVGSRGTIEINPRDTMAKESSIIGVTLFSSTKEEFQQYAAALQAGMEIGWLKPVIG
SQYPLEKVAEAHENIIHAKPDNVKIGAEDARTLVQQALELTQNIEEAISLQILIWKKLTS
LMGREEGHKYISGIVVKSMGSEGKETGFKA

>gi568815597r:74606299_74824821|GENSCAN_predicted_CDS_4|1173_bp
atggcgactggacagaagttgatgagagctgttagagtttttgaatttggtgggccagaa
gtcctgaaattgcgatcagatattgcagtaccgattccaaaagaccatcaggttctaatc
aaggtccatgcatgtggtgtcaaccccgtggagacatacattcgctctggtacttatagt
agaaaaccactcttaccctatactcctggctcagatgtggctggggtgatagaagctgtt
ggagataatgcatctgctttcaagaaaggtgacagagttttcactagcagcacgatctct
gggggttatgcagagtatgctcttgcagcagaccacactgtttacaaactacctgaaaaa
ctggactttaaacaaggagctgccatcggcattccatattttactgcttatcgagctctg
atccacagtgcctgtgtgaaagctggagagagtgttctggttcatggggcaagtggagga
gttggattagcagcatgccaaattgctagagcttatggcttaaagattttgggcactgct
ggtactgaggaaggacaaaagattgttttgcaaaatggagcccatgaagtgttcaatcac
agagaagtgaattacattgataaaattaagaagtatgttggtgagaaaggaattgatata
attattgaaatgttagctaatgtaaatcttagtaaagacttgagtcttctgtcacatgga
ggacgagtgatagttgttggcagcagaggtactattgaaataaacccacgagacaccatg
gcaaaggagtcgagtataattggagttactctcttttcctcaaccaaggaggaatttcag
caatatgcagcagcccttcaagctggaatggaaattggctggttgaaacctgtgataggt
tctcaatatccattggagaaggtggccgaggctcatgaaaatatcattcatgcaaagcca
gataatgtaaaaattggagcagaagatgcccgtaccttagtccagcaggcactggaattg
acgcaaaatattgaagaggctatctcactccagatattgatctggaagaaactgacctct
cttatgggcagggaggaaggccacaagtacatctctggtatagttgtcaagagcatgggt
tctgaaggcaaagaaactggatttaaagcctag

>gi568815597r:74606299_74824821|GENSCAN_predicted_peptide_5|88_aa
MTLRKEQVLEYAARGAKALEFPKLRTKRKFGPFRPPLASIWLPPGRDEATMKEPSADPES
VTHGSQRGVQEMEGAMFEQSGPQPEGQC

>gi568815597r:74606299_74824821|GENSCAN_predicted_CDS_5|267_bp
atgacgttacggaaagagcaggttttggaatatgcagctcgaggtgcgaaggcactagaa
tttcccaaattaagaacgaagaggaagtttggaccttttcggccaccgctcgcttcaata
tggctgcccccagggagagacgaggctaccatgaaggagccgagcgcagaccctgagtcc
gtcacccatggatcgcagcgcggagttcaggaaatggaaggcgcaatgtttgagcaaagc
ggacctcagccggaagggcagtgttga

>gi568815597r:74606299_74824821|GENSCAN_predicted_peptide_6|307_aa
MAPKYGSNDAGDLDLPTGINGFEVQKQNCCWLLVTHKLCVKDDVIVALKKANGDATLKFE
PFVLHVQCRQLQDAQILWVIGLADFKNEAVDPRNVQMCPEFLPSSGFVVLLTSGVKLQTF
AVSVTALKGGMSRVVCSSQWVRGLADFRNEAADFHTRHRALIGAFLQSADWCVYNPLARH
RALIGAFLQSADWCVYNPLARHRALIGAFLQSADWCIYSPLATHRALIGAFLQSADWCIC
SPLARQKSSPSPHLTQKVQLASSLNPPSKQDTSTAAGNLAMTALATSCWIGVKKGPCSCS
VLQRGTL

>gi568815597r:74606299_74824821|GENSCAN_predicted_CDS_6|924_bp
atggccccaaagtacgggagtaatgatgctggcgatttggatctgccaacaggtataaat
ggttttgaggttcagaaacaaaactgttgctggctactggttacacacaaactttgtgta
aaagatgatgtgattgtagctctgaagaaagcaaatggtgatgccactttgaaatttgaa
ccatttgttcttcatgtgcagtgtcgacaattgcaggatgcacagattctgtgggttatt
ggtctcgctgacttcaagaatgaagccgtggaccctcgcaatgttcagatgtgtccggag
tttcttccttccagtgggttcgtggtcttgctgacttcaggagtgaagctgcagaccttc
gcagtgagtgttacagctcttaaaggtggcatgtccagagttgtttgttcctcccagtgg
gttcgtggtcttgctgatttcagaaatgaagccgcagacttccacactagacatagagcg
ctgattggtgcgtttttacagagtgctgattggtgcgtttacaatcctttagctagacac
agagcgctgattggtgcatttttacagagtgctgattggtgcgtttacaatcctttagct
agacacagagcgctgattggtgcatttttacagagtgctgattggtgcatttacagtcct
ttagctacacacagagcgctaattggtgcgtttttacagagtgctgattggtgcatttgc
agtcctctagctagacagaaaagttctccaagtccccacttgacccagaaagtccagctg
gcttcatctctcaatccaccctctaaacaggacacctcaactgctgctgggaatttggcg
atgacggctctagctacttcctgctggataggggtgaagaaggggccctgcagttgtagt
gtcctccagaggggaactctttag

>gi568815597r:74606299_74824821|GENSCAN_predicted_peptide_7|414_aa
MSVCNFILEVSETKNPSEGTNSRHILATQMGHIWRPRWDTFWRPRWDNRLLPSGKKETSK
EISKGPQKRLGYQLCPLQAVAGGEFGPTWVHVSFSLSDLKQIKGNHWKVHCPREQTFSEP
EAPNQLTQQQDSGCRGQVPAHVITLTEPWACLTIEGQEIDFLLDTGVAFSVLISCLRELS
SRSVTIQGILGQPVTSHRKGEGEKAEGNRWADAEAKIAARQNIPLEIPTEGPLVWNNPLQ
EVKLQYSPTETEWGLSRGHSFLPSAWLTTEEGKVLIPKASQWKILKTLHETVHMGIENTH
QMAKSLFTGPNLLQAIRQVVKAYSLWEGPYSVILSTPTAVKMAGVESWIHHTPVKFWTPP
EEPAGPSAQESQDQPDQPRYTCEPLEDLHLLFWKETSQTKKALTSDPEEKPIPP

>gi568815597r:74606299_74824821|GENSCAN_predicted_CDS_7|1245_bp
atgagtgtctgcaacttcattcttgaagtcagtgagaccaagaacccatcggaaggaacc
aattctagacacattttggcaacccagatgggacacatttggcgacccagatgggacaca
ttttggcgacccagatgggacaatcgcctattgccaagtgggaagaaggaaacaagcaaa
gaaatctccaaaggaccacaaaaacgcctgggctatcagttatgtccccttcaagctgta
gcgggaggggaatttggcccaacttgggtacatgtctccttctccctctctgatttaaag
cagatcaagggcaatcactggaaggtgcactgccccagagaacaaacgttctctgagcca
gaagcccccaaccagctgacccaacaacaggactcagggtgccgggggcaagtgccagct
catgtcatcaccctcactgagccctgggcatgtttaaccattgagggccaggaaattgac
ttcctcctggacactggtgtggctttctcagtgttaatctcctgtctcagggagttgtcc
tcaaggtccgttaccatccaaggaatcctgggacagcctgtaaccagccatcggaaaggt
gaaggagaaaaggcagaaggaaaccgttgggcagatgctgaggctaaaattgctgccagg
cagaacatcccattagaaatacctacggaaggacccttggtatggaacaaccccctccaa
gaggttaagctccagtattccccaaccgaaacagagtggggactttcacgggggcatagt
tttctcccctcggcgtggttaacgacagaagaaggaaaggtacttatacccaaagccagc
cagtggaaaatacttaaaaccctccacgaaactgttcacatgggtattgaaaacacgcat
caaatggccaaatccctatttacagggccaaatctcctccaggccatccgacaggtagtc
aaagcctattctttgtgggaaggaccatactcggtaatcctctctacccccactgcagtt
aagatggcaggagtggaatcttggattcaccacaccccagttaaattttggacacccccg
gaggaacctgcgggaccatcagctcaggagtcccaagatcagccagaccagcctcgatac
acctgcgaaccattggaggacttgcatctcctattttggaaggaaacatcccagactaaa
aaggctcttacctctgatcctgaggaaaaacccattcctccttaa

>gi568815597r:74606299_74824821|GENSCAN_predicted_peptide_8|335_aa
MWKRLWNWVTGRGWNSLEDSEEDRKMWESLELPRDLSNGFDQNADNDMDKEIQADVVSDG
DEELVGNWSKGDSCYVLAKRLAAFYPCPRDLWNFDVERDDLGYPAEFLSSKAFKRPRGLG
GKSGFVGWAQGPCAVCSLGTWCPVSQPLKPWLKGTNVELGAVASEGASPKPWQLPCGVEP
TSGQKSRIGIWGPPSRFQKIYGNTWMPRWKFSAEAGPSWRTSARAVPKGSVGSEPPHRVP
TRAMPSGAVRSGLPSSRPQNDRSTDSLYCVPGKATDTQCQLVKVARREAVSCKATEAELP
KTMGTHLLHQHDLDVRHGVKGDHFGALMFDCPAGF

>gi568815597r:74606299_74824821|GENSCAN_predicted_CDS_8|1008_bp
atgtggaagcgactttggaactgggtaacaggtagaggttggaacagtttggaggattca
gaagaagacaggaaaatgtgggaaagtttggaacttcctagagacttgtctaatggcttt
gaccaaaatgctgataatgatatggacaaggaaatccaggctgatgtagtctcagatgga
gatgaggaacttgttgggaactggagcaaaggtgactcttgttatgttttagcaaagaga
ctggcagcattttacccctgccctcgagacttgtggaactttgatgttgagagagatgat
ttagggtatccggcagaatttctaagcagcaaagcattcaagaggcccagaggcctagga
ggaaaaagtggttttgtgggctgggcccaaggtccctgtgctgtgtgcagcctaggaact
tggtgccctgtgtcccagccactcaagccatggctgaaagggaccaatgtagagcttggg
gctgtggcttcagagggtgcaagccccaaaccttggcagcttccatgtggtgttgagcct
acgagtggacaaaagtcaagaattggcatctggggacctccatctagatttcagaagata
tatggcaacacctggatgcccagatggaagtttagtgcagaggcggggccctcatggaga
acctctgctagggcagtgccaaagggaagtgtggggtcagagcccccacacagagtccct
actcgggcaatgcctagtggagctgtgagaagcgggctaccatcctccagaccccagaat
gatagatccaccgacagcttgtactgtgtacctggaaaagccacagacactcagtgccag
cttgtgaaggtagccagaagggaagctgtatcctgcaaagccacagaggcagagctgccc
aagactatgggaacccacctcttgcatcagcatgatctggatgtgagacatggagtcaaa
ggagatcattttggagctttaatgtttgactgccctgctggattttag

>gi568815597r:74606299_74824821|GENSCAN_predicted_peptide_9|59_aa
MTNLHPKIKEKNNSSYIHKKKRNPEKTRAQCITKESDEELENDDDDDLGINVTIFPEDY

>gi568815597r:74606299_74824821|GENSCAN_predicted_CDS_9|180_bp
atgactaacttacatcccaagatcaaagagaaaaataactcatcatatattcataagaaa
aaaagaaacccagaaaaaacacgtgcccagtgtattactaaagaaagtgatgaagaactt
gaaaatgatgatgatgatgatctaggaatcaatgttaccatcttccctgaagattactaa

>gi568815597r:74606299_74824821|GENSCAN_predicted_peptide_10|56_aa
MLTVKQLLTGPSGSTPEEGIVIIEGDSFMCVIAPEDLPVVQDVEEEDSDTEDSDPV

>gi568815597r:74606299_74824821|GENSCAN_predicted_CDS_10|171_bp
atgttaactgtaaaacagcttctgacaggtccttcaggaagtactccagaagaaggcatt
gttatcatagaaggtgacagcttcatgtgtgttattgcccctgaagaccttccagtggta
caagatgtggaggaggaagacagtgatactgaggattctgaccctgtgtag

>gi568815597r:74606299_74824821|GENSCAN_predicted_peptide_11|96_aa
MTFDEVERHHKDSKRHLLKEKEKFLSARGCLEIQYMSVIMLNDSFKLFPLGLFDPWVQER
RHDTGTDASYMLISIFRRSTSTGQPTDQPTKLRDHM

>gi568815597r:74606299_74824821|GENSCAN_predicted_CDS_11|291_bp
atgacctttgatgaagttgagaggcatcacaaagattcgaagaggcacctgttgaaggag
aaagagaaatttctttcagcaagaggctgcttggaaatacagtacatgtcggtaataatg
ttaaatgacagcttcaaactatttcccttaggcctgtttgacccgtgggttcaagaaaga
aggcatgatactggaactgatgcaagctatatgctcatttctatatttagacgctcaaca
tcaacaggtcagcccactgaccaaccaaccaagttaagggatcatatgtag