GENSCAN 1.0	Date run:  5-Nov-116	Time: 06:13:56

Sequence gi568815595f:23817860_24019498 : 201639 bp : 41.74% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   1832   1962  131  1  2   60   31   125 0.475   2.57
 1.02 Intr +   4125   4252  128  0  2   82   73    94 0.404   6.70
 1.03 Intr +  24225  24294   70  1  1   60  110    30 0.007  -0.28
 1.04 Term +  42259  42382  124  1  1   19   46   135 0.017  -0.72
 1.05 PlyA +  42912  42917    6                               1.05

 2.00 Prom +  43712  43751   40                              -3.05
 2.01 Init +  43760  44034  275  1  2   43   72   193 0.422   9.69
 2.02 Intr +  55271  55346   76  2  1   64  115    49 0.147   3.80
 2.03 Intr +  60786  60952  167  2  2   26  101   103 0.397   3.24
 2.04 Intr +  61753  61839   87  1  0   93   94    48 0.381   4.07
 2.05 Intr +  69708  69840  133  0  1   53  116   121 0.748  11.13
 2.06 Intr +  76307  76536  230  1  2    8   72   154 0.286   1.54
 2.07 Term +  76979  77177  199  2  1   53   41   128 0.681   0.49
 2.08 PlyA +  78462  78467    6                               1.05

 3.04 PlyA -  79957  79952    6                               1.05
 3.03 Term -  83190  82910  281  1  2   36   37   265 0.767  10.82
 3.02 Intr -  85114  85027   88  1  1   47   36   122 0.512   1.52
 3.01 Init -  89820  89758   63  0  0   69   81    72 0.610   5.80
 3.00 Prom -  96468  96429   40                              -7.15

 4.00 Prom +  98443  98482   40                              -7.45
 4.01 Init + 100001 100172  172  1  1   99  102   209 0.995  23.05
 4.02 Intr + 100581 100717  137  1  2   91   84   171 0.999  16.37
 4.03 Term + 101337 101642  306  2  0   91   34   206 0.998   9.63
 4.04 PlyA + 101672 101677    6                               1.05

 5.03 PlyA - 102018 102013    6                               1.05
 5.02 Term - 108673 108525  149  2  2   64   43   206 0.978  10.78
 5.01 Init - 109695 109629   67  0  1   65   44    26 0.304  -2.81
 5.00 Prom - 112698 112659   40                              -7.55

 6.00 Prom + 115096 115135   40                              -6.65
 6.01 Init + 119102 119227  126  1  0   63   97   132 0.847  11.81
 6.02 Intr + 128346 128623  278  2  2    4   -9   269 0.007   4.19
 6.03 Intr + 136739 136944  206  2  2   88  108    95 0.410   9.42
 6.04 Intr + 138178 138266   89  2  2   96   98    49 0.973   5.47
 6.05 Intr + 141812 141956  145  1  1   82   80    77 0.990   5.23
 6.06 Intr + 144118 144746  629  2  2   50   40   468 0.758  29.20
 6.07 Intr + 147118 147303  186  0  0   48   92    75 0.650   2.86
 6.08 Intr + 149954 150164  211  1  1  113  115   210 0.998  23.76
 6.09 Term + 159364 159560  197  2  2   60   48   114 0.804   1.19
 6.10 PlyA + 159667 159672    6                               1.05

 7.04 PlyA - 160571 160566    6                               1.05
 7.03 Term - 163884 163493  392  1  2   30   37   282 0.872  11.46
 7.02 Intr - 164548 164229  320  0  2   85   97   177 0.628  12.98
 7.01 Init - 171208 171135   74  1  2  115   99    27 0.910   7.17
 7.00 Prom - 177472 177433   40                              -6.85

 8.05 PlyA - 177894 177889    6                               1.05
 8.04 Term - 184306 184154  153  1  0   90   38   104 0.549   2.54
 8.03 Intr - 199076 199015   62  0  2   89   80    86 0.261   5.43
 8.02 Intr - 199499 199355  145  2  1  -49  103   115 0.227  -1.77
 8.01 Intr - 201044 200884  161  0  2   74   93   155 0.355  13.39

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term -  99532  99311  222  1  0   71   45   314 0.993  21.33
S.002 Init -  99679  99656   24  1  0   67   79    33 0.811  -0.11
S.003 Term - 133959 133738  222  0  0   60   37   157 0.940   3.73
S.004 Init - 134334 134107  228  0  0   88   63   111 0.918   7.04


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815595f:23817860_24019498|GENSCAN_predicted_peptide_1|150_aa
KIVEIAGEIAVTFYSCPLLAVFLSWHPSSFGNFDLPAITEKLWTKERHHEKSAQDEDSGI
WHLEVYTRKSQQRRQKENQESVVLESSESKCGVTFGLTIMGSGISDVRIRLKFRAQPFAA
SLLSQLSVLGFWVLSPWLDEDERSDPLRFL

>gi568815595f:23817860_24019498|GENSCAN_predicted_CDS_1|453_bp
aaaatagtggaaattgctggggaaattgctgtcacattttacagctgtccattgctggca
gtctttctgagttggcacccaagcagttttggcaattttgaccttcctgcaatcacagag
aagctctggacaaaggaaaggcatcatgagaagagtgcccaggatgaagactcaggcatc
tggcatttagaagtgtacactaggaaaagccagcaaaggagacagaaggaaaatcaagag
agtgtggtattagaaagcagtgaaagtaaatgtggtgtaacttttggtttgactataatg
ggcagtggaatctcagatgttaggatcagactgaaattcagagctcagccctttgctgcc
agcttgctctcacagctgtctgtccttggtttctgggtgctttcaccttggctagatgaa
gatgaacgttctgacccgctcaggtttctgtag

>gi568815595f:23817860_24019498|GENSCAN_predicted_peptide_2|388_aa
MPRETHWRRNTQVDGRREECTGVGAHWDASRPSTGGMTQSLAGAVGEELGHQAARLQGKT
ISLLAAPSAESCFHSIKPRTHSPSPHVILFFWLWPSHTWCRFRKISQYKCEKMGVKMAHA
NPIVNCSCEGSRLRAPYENLMPDDLLLSPITPTWDCLVAGKQARGLPTDSTLCVCPNIWG
GALIPVRGHQGGLGRGGGQGTSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFTPEY
PFKPPKTLRVTEYSSQSSGRRRDPKPDFQIVPVKITQDDVTVDNGQQELSKASLRSSSEL
IRSWNHYCLPSCLYIELELPVLQPAPQLLLITELTHGQPALAVTLVIILSDFTGHVDAAS
SNLVSYSLTSPMVSSSLPQPFTTPVVIS

>gi568815595f:23817860_24019498|GENSCAN_predicted_CDS_2|1167_bp
atgccgagagaaacacattggcgaaggaatacacaggtggatggacgtcgagaggaatgc
actggtgtaggagcacactgggatgccagcaggccatcgactggtggaatgacacaaagt
ttggctggggcagttggagaagagttgggccaccaagcggccagactccaggggaaaacc
atttcccttctggctgccccatctgctgagagctgcttccactcaataaaacctcgcact
cattctccaagcccacatgtgatcctattcttctggctgtggccctctcacacctggtgt
agattcaggaaaatctcacagtacaaatgtgagaaaatgggagtaaaaatggcacacgca
aaccctattgtgaactgctcatgtgagggatctaggttgcgtgctccttatgagaatcta
atgcctgatgatctgctactgtcacccatcacccccacatgggactgtctagttgcagga
aaacaagctcgggggctccccactgattctacattatgcgtctgtcctaacatctgggga
ggtgctctgatacctgtccgtgggcaccagggaggcctgggccgcggcggaggacagggc
accagtgctggtcccaaaggcgataacatctatgaatggagatcaaccattctagggcct
ccaggatccgtgtatgagggtggtgtattctttctcgatatcacttttacaccagaatat
cccttcaagcctccaaagacactgcgcgtgacagaatacagcagtcaaagctcggggagg
agaagagaccccaaaccagattttcagatagtgcccgtaaagattacacaagacgatgtg
acagtagacaatgggcagcaagaactgtcaaaggcctctctgaggagcagcagtgaactc
atcagatcttggaaccactactgtcttccttcctgtctgtacattgagcttgagctccct
gtgctccagccggccccccaactgctcctcatcacagagctgactcatggtcaacctgct
ctcgccgttactctggtcataattcttagtgatttcactggccacgtagatgctgcttcc
agtaacctggtctcttattctttgacttctccaatggtctcatcatccttacctcagcca
ttcaccactcccgtggtcatatcctag

>gi568815595f:23817860_24019498|GENSCAN_predicted_peptide_3|143_aa
MVKRGSNGNYTFSATDSICTKILQIPLDGDKELAASVLGAERESRRTSTFRMEDCETMED
VYMASVETDRGVKEQLHLYDTRGLQEGVELPKHYFSFADGFVLVYSVNNLESFQRVELLK
KEIDKFKDKKEASGYVKNAKCEL

>gi568815595f:23817860_24019498|GENSCAN_predicted_CDS_3|432_bp
atggtgaagagaggatctaatggcaactatacgtttagtgccactgactcgatttgcact
aagattctccagattcccctggatggggataaagagctggctgccagtgttttgggagca
gaaagggaaagccggaggacttcaacattcagaatggaagattgcgaaacaatggaagat
gtatacatggcttcagtagaaacagaccgaggagtaaaagaacagttacatctttatgac
accagaggtctacaggaaggcgtggagctgccaaagcattatttttcatttgctgatggc
ttcgttcttgtgtacagtgtgaataaccttgaatcctttcaaagagtggagcttctgaag
aaagaaatcgataagttcaaagacaaaaaagaggcaagtggatatgttaaaaatgccaaa
tgtgaattataa

>gi568815595f:23817860_24019498|GENSCAN_predicted_peptide_4|204_aa
MGAYKYIQELWRKKQSDVMRFLLRVRCWQYRQLSALHRAPRPTRPDKARRLGYKAKQGYV
IYRIRVRRGGRKRPVPKGATYGKPVHHGVNQLKFARSLQSVAEERAGRHCGALRVLNSYW
VGEDSTYKFFEVILIDPFHKAIRRNPDTQWITKPVHKHREMRGLTSAGRKSRGLGKGHKF
HHTIGGSRRAAWRRRNTLQLHRYR

>gi568815595f:23817860_24019498|GENSCAN_predicted_CDS_4|615_bp
atgggtgcatacaagtacatccaggagctatggagaaagaagcagtctgatgtcatgcgc
tttcttctgagggtccgctgctggcagtaccgccagctctctgctctccacagggctccc
cgccccacccggcctgataaagcgcgccgactgggctacaaggccaagcaaggttacgtt
atatataggattcgtgttcgccgtggtggccgaaaacgcccagttcctaagggtgcaact
tacggcaagcctgtccatcatggtgttaaccagctaaagtttgctcgaagccttcagtcc
gttgcagaggagcgagctggacgccactgtggggctctgagagtcctgaattcttactgg
gttggtgaagattccacatacaaattttttgaggttatcctcattgatccattccataaa
gctatcagaagaaatcctgacacccagtggatcaccaaaccagtccacaagcacagggag
atgcgtgggctgacatctgcaggccgaaagagccgtggccttggaaagggccacaagttc
caccacactattggtggctctcgccgggcagcttggagaaggcgcaatactctccagctc
caccgttaccgctaa

>gi568815595f:23817860_24019498|GENSCAN_predicted_peptide_5|71_aa
MPIKSNAFISFGGVSCRLPGFQKNDTKKKKRKKRKRKEKERKRKKRKKREEEDEEQEEEE
EGGGGRRKKKK

>gi568815595f:23817860_24019498|GENSCAN_predicted_CDS_5|216_bp
atgccaattaaatcaaatgctttcatcagttttggaggagtgagttgccgtttgccagga
tttcagaagaatgacacaaaaaaaaagaagaggaagaagaggaagaggaaagagaaggag
agaaagaggaagaagagaaaaaagagagaagaggaggacgaggagcaagaggaggaggag
gaaggaggaggaggaagaagaaagaagaagaaataa

>gi568815595f:23817860_24019498|GENSCAN_predicted_peptide_6|688_aa
MRCTWRIHQWRRAPDKLKLSEELIVEKGPTWVSKSPLSIGDKRALTPQCTGRRTLFSRGD
PKARTPRKPNEPAPGEAGSCIPCRFRGGSAGRGRAAGRRRRLGEGVGLSRRDTLEGALRC
FDPERLPADWVAPPLEGSENSFQSSSSSVPSSPNSSNSDTNGNPKNGDLANIEGILKNDR
IDCSMKTSKSSAPGMTKSHSGVTKFSGMVLLCKVCGDVASGFHYGVHACEGCKGFFRRSI
QQNIQYKKCLKNENCSIMRMNRNRCQQCRFKKCLSVGMSRDAVRFGRIPKREKQRMLIEM
QSAMKTMMNSQFSGHLQNDTLVEHHEQTALPAQEQLRPKPQLEQENIKSSSPPSSDFAKE
EVIGMVTRAHKDTFMYNQEQQENSAESMQPQRGERIPKNMEQYNLNHDHCGNGLSSHFPC
SESQQHLNGQFKGRNIMHYPNGHAICIANGHCMNFSNAYTQRVCDRVPIDGFSQNENKNS
YLCNTGGRMHLVCPMSKSPYVDPHKSGHEIWEEFSMSFTPAVKEVVEFAKRIPGFRDLSQ
HDQVNLLKAGTFEVLMVRFASLFDAKERTVTFLSGKKYSVDDLHSMGAGDLLNSMFEFSE
KLNALQLSDEEMSLFTAVVLVSADRSGIENVNSVEALQETLIRALRTLIMKNHPNEASIF
TKLLLKLPDLRSLNNMHSEELLAFKVHP

>gi568815595f:23817860_24019498|GENSCAN_predicted_CDS_6|2067_bp
atgcgctgcacttggagaattcaccagtggaggagagctcctgataaactgaagctgagt
gaagagttgattgttgaaaagggacccacctgggtctctaagtctcctctaagtattggc
gacaagcgggcgctgacaccgcagtgcaccggacgccgcacgctcttttcgcgaggtgac
cccaaggcgcggaccccgcgcaaaccaaacgaaccggcgcctggggaggctggtagctgc
ataccttgcagattccgaggaggaagtgcaggacgagggcgtgctgcaggccggaggagg
cgcctcggggaaggcgtggggctttcccgaagggatacgctcgaaggagctctgaggtgc
ttcgatcccgagcgactccccgcagactgggtagcaccgccccttgagggttctgagaat
agtttccagtcctcctcctcttctgttccatcttctccaaatagctctaattctgatacc
aatggtaatcccaagaatggtgatctcgccaatattgaaggcatcttgaagaatgatcga
atagattgttctatgaaaacaagcaaatcgagtgcacctgggatgacaaaaagtcatagt
ggtgtgacaaaatttagtggcatggttctactgtgtaaagtctgtggggatgtggcgtca
ggattccactatggagttcatgcttgcgaaggctgtaagggtttctttcggagaagtatt
caacaaaacatccagtacaagaagtgcctgaagaatgaaaactgttctataatgagaatg
aataggaacagatgtcagcaatgtcgcttcaaaaagtgtctgtctgttggaatgtcaaga
gatgctgttcggtttggtcgtattcctaagcgtgaaaaacagaggatgctaattgaaatg
caaagtgcaatgaagaccatgatgaacagccagttcagtggtcacttgcaaaatgacaca
ttagtagaacatcatgaacagacagccttgccagcccaggaacagctgcgacccaagccc
caactggagcaagaaaacatcaaaagctcttctcctccatcttctgattttgcaaaggaa
gaagtgattggcatggtgaccagagctcacaaggatacctttatgtataatcaagagcag
caagaaaactcagctgagagcatgcagccccagagaggagaacggattcccaagaacatg
gagcaatataatttaaatcatgatcattgcggcaatgggcttagcagccattttccctgt
agtgagagccagcagcatctcaatggacagttcaaagggaggaatataatgcattaccca
aatggtcatgccatttgtattgcaaatggacattgtatgaacttctccaatgcttatact
caaagagtatgtgatagagttccgatagatggattttctcagaatgagaacaagaatagt
tacctgtgcaacactggaggaagaatgcatctggtttgtccaatgagtaagtctccatat
gtggatcctcataaatcaggacatgaaatctgggaagaattttcgatgagcttcactcca
gcagtgaaagaagtggtggaatttgcaaagcgtattcctgggttcagagatctctctcag
catgaccaggtcaaccttttaaaggctgggacttttgaggttttaatggtacggttcgca
tcattatttgatgcaaaggaacgtactgtcacctttttaagtggaaagaaatatagtgtg
gatgatttacactcaatgggagcaggggatctgctaaactctatgtttgaatttagtgag
aagctaaatgccctccaacttagtgatgaagagatgagtttgtttacagctgttgtcctg
gtatctgcagatcgatctggaatagaaaacgtcaactctgtggaggctttgcaggaaact
ctcattcgtgcactaaggaccttaataatgaaaaaccatccaaatgaggcctctattttt
acaaaactgcttctaaagttgccagatcttcgatctttaaacaacatgcactctgaggag
ctcttggcctttaaagttcacccttaa

>gi568815595f:23817860_24019498|GENSCAN_predicted_peptide_7|261_aa
MANLKLPMRSQLAHKIPETLAFMSWLRSACSPCYWHSLRPWSKVGAKSWGHEQQQETDGF
LGRRRRVPSEAPPSGYRGPECWQLSRQPCRPEWKLVVPFPGPPMAARGPISMHFLLSEAH
KIPRLSQSWGKAPLHLTLHSSVYLILPGCRTRTWDPLNGKAKSCNTNRIETCPLLTTLWV
KERKAAASPSGTSHLGTPQAKAVIPSLEPCGSWHLQPSGHHCIPRCQLGKLLMVHLVQLQ
PRREPAPGDVYPMAAADVSAQ

>gi568815595f:23817860_24019498|GENSCAN_predicted_CDS_7|786_bp
atggccaatctcaagctaccaatgcgaagtcaactggctcacaaaattcctgaaacattg
gctttcatgagctggctcagaagtgcctgttccccctgctattggcactcactccgacct
tggagcaaagttggggccaagtcctggggtcatgaacagcagcaagagacagacgggttc
ctgggcagaaggaggcgggtccccagtgaggccccaccttcaggctacagagggcctgaa
tgctggcaactgagccgccagccctgcagaccagagtggaaacttgtggtgccttttcca
ggcccacccatggctgcccgtggaccaatcagcatgcacttcctcctctccgaggcccat
aaaatccctaggctgagtcagagctggggaaaagctcctcttcatcttaccctccactca
tctgtgtacctcattcttcctggttgcaggacaagaacttgggacccactgaatggcaaa
gctaaaagttgtaacacaaataggattgaaacatgccccttgctcaccacgctgtgggtg
aaggagagaaaagctgcagccagcccttcagggacgtcacacctgggaacgccccaagcc
aaggctgtgattccctctttggagccctgtggttcctggcatcttcagccttccggccac
cactgcattcccaggtgccagctgggaaagctgctcatggtgcacctggtccagctgcag
cctcgcagagagcctgcacctggagatgtctatcccatggcagcagctgatgtgtctgca
cagtag

>gi568815595f:23817860_24019498|GENSCAN_predicted_peptide_8|173_aa
XVGSRLVSLSTACRANRVEQDQQARAKLKQRRRQPQRFLAGEQHPEDFVIAGVKRAPLES
TPMKEREERIRQKGIQAFDVGPAASVNPMVSSGAKWPIRIMPGKECSNLRESVRGKLQIL
EIQTWAGSYPVAFSDSQAFGFRLNYAAGFPGSPAFRQHITGLLGLQNCVTQFP

>gi568815595f:23817860_24019498|GENSCAN_predicted_CDS_8|522_bp
ngcgtgggatccaggctggtatctctgagcacagcctgcagggccaatcgagtggaacaa
gaccagcaggcgcgagcaaaactcaagcagaggcgccgccagccacagaggtttctggct
ggtgaacaacacccagaggattttgtgatagcaggagtaaagagagcacccttggaatcc
acacctatgaaagagagagaggaaaggatcaggcagaagggaatccaagcctttgatgta
ggtccagcagcctcagttaacccaatggtgagctctggagccaaatggcccatccgaatt
atgccagggaaagaatgttctaacctccgggaaagtgtacgagggaagctccagattctg
gaaattcagacttgggctgggagttacccagttgccttctctgattctcaggcctttgga
ttcagactgaactatgctgctggctttcctggttctccagctttcaggcagcatatcacg
ggacttcttggcctccaaaactgtgtgacccaattcccataa