GENSCAN 1.0	Date run:  5-Nov-116	Time: 06:02:44

Sequence gi568815595r:122314539_122515528 : 200990 bp : 39.39% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Term +    705    973  269  1  2   10   54   240 0.389   7.47
 1.02 PlyA +    986    991    6                               1.05

 2.00 Prom +   1078   1117   40                              -9.35
 2.01 Init +   3269   3456  188  1  2   55    8   211 0.476   8.38
 2.02 Intr +   3792   4000  209  0  2   26   69   231 0.103  12.80
 2.03 Intr +  10723  10820   98  2  2   66  113    75 0.020   6.61
 2.04 Intr +  23009  23110  102  1  0  109   72   116 0.997  11.55
 2.05 Term +  26901  27029  129  2  0  109   43   132 0.996   8.00
 2.06 PlyA +  27105  27110    6                               1.05

 3.06 PlyA -  27160  27155    6                               1.05
 3.05 Term -  45381  45331   51  0  0   93   43    89 0.847   1.35
 3.04 Intr -  48489  48430   60  0  0  116   70    37 0.639   2.71
 3.03 Intr -  53784  53638  147  0  0   84  115    57 0.982   7.51
 3.02 Intr -  57262  57137  126  1  0   17   84    97 0.657   2.16
 3.01 Init -  58498  58445   54  1  0   32  116    56 0.687   4.13
 3.00 Prom -  61768  61729   40                              -8.35

 4.00 Prom +  66187  66226   40                              -7.25
 4.01 Init +  69728  69761   34  1  1   99   94    50 0.492   7.02
 4.02 Intr +  78544  78648  105  2  0   76   91    51 0.811   3.47
 4.03 Intr +  88222  88344  123  2  0  117  105     3 0.956   4.54
 4.04 Intr +  89720  89825  106  0  1   89   80   127 0.999  10.35
 4.05 Intr +  92743  92851  109  1  1   88  100   130 0.995  13.57
 4.06 Term +  94767  94949  183  2  0    1   48   184 0.704   2.26
 4.07 PlyA +  95443  95448    6                               1.05

 5.02 PlyA -  95476  95471    6                               1.05
 5.01 Sngl - 100990  99998  993  1  0   87   36   486 0.534  39.93
 5.00 Prom - 111863 111824   40                              -8.15

 6.15 PlyA - 112122 112117    6                               1.05
 6.14 Term - 112634 112447  188  0  2   87   48   272 0.963  19.77
 6.13 Intr - 113178 113000  179  2  2   91   95   201 0.998  19.74
 6.12 Intr - 119250 119123  128  0  2   62  108   104 0.802   8.36
 6.11 Intr - 127578 127500   79  2  1  111   80    83 0.831   8.43
 6.10 Intr - 135199 135036  164  1  2  112   58   168 0.025  14.05
 6.09 Intr - 137095 136996  100  0  1   86  116    92 0.719  10.99
 6.08 Intr - 137526 137438   89  0  2   82   92     7 0.570  -1.65
 6.07 Intr - 139426 139332   95  2  2   33   98   119 0.187   6.16
 6.06 Intr - 143290 143188  103  1  1   29   55   136 0.191   3.23
 6.05 Intr - 146780 146686   95  0  2    2   80    88 0.812  -1.84
 6.04 Intr - 149503 149404  100  1  1   79  105    84 0.938   7.96
 6.03 Intr - 152891 152784  108  2  0   75   63   154 0.948  11.16
 6.02 Intr - 182032 181899  134  2  2   82   99   147 0.845  14.64
 6.01 Init - 183987 183861  127  0  1   77   85    41 0.813   3.07
 6.00 Prom - 189662 189623   40                              -6.65

 7.03 PlyA - 189672 189667    6                               1.05
 7.02 Term - 199815 199472  344  1  2  -28   35   339 0.584  10.69
 7.01 Intr - 200169 200015  155  2  2  116   35    77 0.456   3.99

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init +  20799  20825   27  2  0   77  115    -6 0.887   0.65
S.002 Sngl + 130401 130883  483  2  0   88   43   223 0.962  13.62
S.003 Term - 135199 135032  168  1  0  112   44   180 0.973  12.90
S.004 Term - 181286 181215   72  2  0   40   42   110 0.882  -1.47


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815595r:122314539_122515528|GENSCAN_predicted_peptide_1|89_aa
XPSGHTHKQLDIKRNTPMVEDTSGWKLRGTHPRKSTPTGTDRFRQAIDWWNNAEFGWGGR
RRAQLPGSPIAGENHLPTPAPFWPSHLPR

>gi568815595r:122314539_122515528|GENSCAN_predicted_CDS_1|270_bp
natcctagcgggcacacacacaagcagctggacatcaagaggaacacaccaatggttgag
gacacaagcggctggaaattgagaggaacacacccgcgtaagagcacacccacaggcact
gacagatttcggcaggccatcgactggtggaacaatgcagagtttggctggggtggtcgg
agaagagcccagctgcccggaagcccgattgcaggggaaaaccaccttcccactccagcc
cccttctggccttcccatctacctcgctga

>gi568815595r:122314539_122515528|GENSCAN_predicted_peptide_2|241_aa
MEEVDAAMNARPHKEDGRVVEPKRAVSREDSQRLGAHLTLKKIFVGGIKEDTEEHHLRDY
FEDCGDGGYGGNKDGYNGFGSDSGYEGGSPSYSGGSRGYGSGGQDSGNQGSGYDGGGSHD
SYNNGVGVSDFGASCPAKKQSAKMIPGGLSEAKPATPEIQEIVDKVKPQLEEKTNETYGK
LEAVQYKTQVVAGTNYYIKVRAGDNKYMHLKVFKSLPGQNEDLVLTGYQVDKNKDDELTG
F

>gi568815595r:122314539_122515528|GENSCAN_predicted_CDS_2|726_bp
atggaggaggtagatgcagccatgaatgcaaggccacacaaggaggatggaagagttgtg
gaaccaaagagagctgtctcaagagaagattctcagagactaggtgcccacttaactctg
aaaaagatatttgttggtggcattaaagaagacactgaagaacatcacctaagagattat
tttgaagactgtggtgatggtggatatggtggcaataaggatggctataatggatttggt
agtgatagtggttatgaaggaggcagccctagttactctggaggaagcagaggctacgga
agtggtggacaggattctggaaaccagggcagtggctatgatgggggtggcagccatgac
agctataacaatggagtaggcgtaagtgactttggtgcatcctgtccagcaaagaagcaa
tcagccaaaatgatacctggaggcttatctgaggccaaacccgccactccagaaatccag
gagattgttgataaggttaaaccacagcttgaagaaaaaacaaatgagacttacggaaaa
ttggaagctgtgcagtataaaactcaagttgttgctggaacaaattactacattaaggta
cgagcaggtgataataaatatatgcacttgaaagtattcaaaagtcttcccggacaaaat
gaggacttggtacttactggataccaggttgacaaaaacaaggatgacgagctgacgggc
ttttag

>gi568815595r:122314539_122515528|GENSCAN_predicted_peptide_3|145_aa
MDEERKELVSVMDLSLAKELLKVMRTIDDRIVHELNTTVPTASFAGKIDASQTCKQLYES
LMAAHASRDRVIKNCIAQTSAVVKNLREEREKNLDDLTLLKQLRKEQTKLKWMQSELNVE
EVVNDRSWKVFNERCRIHFKPPKNE

>gi568815595r:122314539_122515528|GENSCAN_predicted_CDS_3|438_bp
atggacgaggaaagaaaggagttggtttcagtcatggatttaagtttggcaaaggaatta
ctcaaggtgatgaggacaattgatgacagaatagtacatgaattaaacactacggttcca
acagcttcctttgcagggaaaattgatgccagccaaacctgtaaacaactttatgagtct
ttgatggcagctcatgccagtagagacagagtcataaaaaactgtatagcccagacttca
gcagtagtaaaaaacctccgagaagagagagaaaagaatttggacgatttaacgttatta
aaacaacttagaaaagagcagacaaagttgaaatggatgcagtcagaactgaatgttgaa
gaagtggtaaatgacaggagctggaaggtgtttaatgaacgctgccgaattcacttcaag
cctccaaagaatgaataa

>gi568815595r:122314539_122515528|GENSCAN_predicted_peptide_4|219_aa
MGSLSGLRLAAGGTDVVFARSRQSFLAFIALENKINEAFYEKDCVPGSCFRLCERDVSSS
LRLTRSSDLKRINGFCTKPQESPGAPSRTYNRVPLHKPTDWQKKILIWSGRFKKEDEIPE
TVSLEMLDAAKNKMRVKISYLMIALTVVGCIFMVIEGKKRSEELEGSEYADKLGKEKWQQ
QRKVKEEKRDRNGNEKVFSIKEKWGGMRRKYKRKGEDKD

>gi568815595r:122314539_122515528|GENSCAN_predicted_CDS_4|660_bp
atggggagcctcagcggtctgcgcctggcagcaggtggcactgatgttgtgtttgccaga
tccaggcaaagctttctggcatttatagccctagaaaacaaaataaatgaggccttttat
gaaaaagactgtgtgccaggaagctgttttaggttatgtgaaagagatgtttcctcatct
ctaaggcttaccagaagctctgatttgaagagaataaatggattttgcacaaaaccacag
gaaagtcccggagctccatcccgcacttacaacagagtgcctttacacaaacctacggat
tggcagaaaaagatcctcatatggtcaggtcgcttcaaaaaggaagatgaaatcccagag
actgtctcgttggagatgcttgatgctgcaaagaacaagatgcgagtgaagatcagctat
ctaatgattgccctgacggtggtaggatgcatcttcatggttattgagggcaagaagaga
agtgaggaactagaaggatctgagtatgcagataagttggggaaggagaaatggcagcaa
cagagaaaagtgaaagaagaaaaacgggatagaaatggcaatgagaaggtatttagtata
aaagagaagtggggtggaatgagaagaaagtataagagaaaaggagaggataaagactga

>gi568815595r:122314539_122515528|GENSCAN_predicted_peptide_5|330_aa
MATKESRDAKAQLALSSSANQSKEVPENPNYALKCTLVGHTEAVSSVKFSPNGEWLASSS
ADRLIIIWGAYDGKYEKTLYGHNLEISDVAWSSDSSRLVSASDDKTLKLWDVRSGKCLKT
LKGHSNYVFCCNFNPPSNLIISGSFDETVKIWEVKTGKCLKTLSAHSDPVSAVHFNCSGS
LIVSGSYDGLCRIWDAASGQCLKTLVDDDNPPVSFVKFSPNGKYILTATLDNTLKLWDYS
RGRCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVV
ISAACHPTENLIASAALENDKTIKLWMSNH

>gi568815595r:122314539_122515528|GENSCAN_predicted_CDS_5|993_bp
atggcaaccaaggagtcaagagacgccaaagcacagttggccctctcctcatcggccaat
cagagcaaggaagtgcctgaaaacccaaactatgctctcaaatgtactcttgtgggacac
acggaagcagtgtcatcagttaagtttagtcctaatggagaatggctagcaagttcttct
gctgataggctaatcataatttggggagcatatgatggaaaatatgagaaaacactctat
ggtcataatttggaaatatcggatgttgcctggtcatcagattccagtcgtcttgtttct
gcctcagatgataaaactctaaaattatgggatgtgagatctggaaaatgtttgaaaaca
ctgaaggggcacagtaattatgtcttttgttgtaacttcaatccgccatccaaccttata
atctcgggatcttttgatgagactgtaaaaatatgggaggtgaaaacaggaaagtgtctc
aagactttgtctgctcattctgacccagtttctgctgttcattttaattgtagtgggtcc
ttgatagtgtcaggtagctatgatggcctctgtagaatctgggatgctgcatcaggtcag
tgtttaaaaacgctcgttgatgacgataaccctcctgtctcttttgtaaaattttctcca
aatggtaaatacattctcactgcaactttggacaacactcttaaactatgggattatagc
agaggcaggtgcctgaaaacatacactggtcataagaatgagaaatattgcatatttgcc
aatttttcagttactggtggaaagtggattgtgtctggttccgaggataacctggtttac
atttggaaccttcagactaaagagattgtgcagaaattacaaggccatacagatgttgtg
atctcagcagcttgtcatcctacagaaaacctcatcgcatcagcagcattagaaaatgac
aaaacaattaaactgtggatgagtaaccactaa

>gi568815595r:122314539_122515528|GENSCAN_predicted_peptide_6|562_aa
MVRLGCCNEIPETRWLTDNRNLFLTVLDAGKSKIKALADSVSEIMTTPGKENFRLKSYKN
KSLNPDEMRRRREEEGLQLRKQKREEQLFKRRNVATAEEETEEEVMSDGGFHEAQISNME
MAPGGVITSDMIEMIFSKSPEQQLSATQKFRKLLSKEPNPPIDEVISTPGVVARFVEFLK
RKENCTLQEPEWNRQSGQQQSPDPNGEREPGVPQPGVGNLIGGNSLQTRIVIQAGAVPIF
IELLSSEFEDVQEQAVWALGNIAGDSTMCRDYVLDCNILPPLLQLFSKQNRLTMTRNAVW
ALSNLCRGKSPPPEFAKVSPCLNVLSWLLFVSDTDVLADACWALSYLSDGPNDKIQAVID
AGVCRRLVELLMHNDYKVVSPALRAVGNIVTGDDIQTQTVIDANIFPALISILQTAEFRT
RKEAAWAITNATSGGSAEQIKYLVELGCIKPLCDLLTVMDSKIVQVALNGLENILRLGEQ
EAKRNGTGINPYCALIEEAYGLDKIEFLQSHENQEIYQKAFDLIEHYFGTEDEDSSIAPQ
VDLNQQQYIFQQCEAPMEGFQL

>gi568815595r:122314539_122515528|GENSCAN_predicted_CDS_6|1689_bp
atggtccgtttgggttgctgtaatgaaataccagagactaggtggctaacagacaataga
aatttgtttctcacagttctggatgctgggaagtccaagatcaaggcactggcagattca
gtgtctgaaatcatgaccaccccaggaaaagagaactttcgcctgaaaagttacaagaac
aaatctctgaatcccgatgagatgcgcaggaggagggaggaagaaggactgcagttacga
aagcagaaaagagaagagcagttattcaagcggagaaatgttgctacagcagaagaagaa
acagaagaagaagttatgtcagatggaggctttcatgaggctcagattagtaacatggag
atggcaccaggtggtgtcatcacttctgacatgattgaaatgatattttccaaaagccca
gagcaacagctttcagcaacacagaaattcaggaagctgctttcaaaagaacctaaccct
cctattgatgaagttatcagcacaccaggagtagtggccaggtttgtggagttcctcaaa
cgaaaagagaattgtacactgcaggaaccagagtggaaccggcaaagtggccagcaacag
agtcctgatccaaatggagaaagggaaccaggcgtacctcaacctggagtgggaaacttg
ataggaggaaattctcttcagacccgaattgtgattcaggcaggagctgtgcccatcttc
atagagttgctcagctcagagtttgaagatgtccaggaacaggcagtctgggctcttggc
aacattgctggagatagtaccatgtgcagggactatgtcttagactgcaatatccttccc
cctcttttgcagttattttcaaagcaaaaccgcctgaccatgacccggaatgcagtatgg
gctttgtctaatctctgtagagggaaaagtccacctccagaatttgcaaaggtttctcca
tgtctgaatgtgctttcctggttgctgtttgtcagtgacactgatgtactggctgatgcc
tgctgggccctctcatatctatcagatggacccaatgataaaattcaagcggtcatcgat
gcgggagtatgtaggagacttgtggaactgctgatgcataatgattataaagtggtttct
cctgctttgcgagctgtgggaaacattgtcacaggggatgatattcagacacagactgtg
atagatgccaacattttcccagccctcattagtattttacaaactgctgaatttcggaca
agaaaagaagcagcttgggccatcacaaatgcaacttctggaggatcagctgaacagatc
aagtacctagtagaactgggttgtatcaagccgctctgtgatctcctcacggtcatggac
tctaagattgtacaggttgccctaaatggcttggaaaatatcctgaggcttggagaacag
gaagccaaaaggaatggcactggcattaacccttactgtgctttgattgaagaagcttat
ggtctggataaaattgagttcttacagagtcatgaaaaccaggagatctaccaaaaggcc
tttgatcttattgagcattacttcgggaccgaagatgaagacagcagcattgcaccccag
gttgaccttaaccagcagcagtacatcttccaacagtgtgaggctcctatggaaggtttc
cagctttga

>gi568815595r:122314539_122515528|GENSCAN_predicted_peptide_7|166_aa
XSGQSRRDSGEALGRGRVPAGPRAGVPGPDARAASVRHGPGCPNGHKAGGGEERCDRGRK
EQGWRVKILTLAKRDRLGNSQVTDRVGAGGPEGGGGSGGWRRPAAVYRCHNNMGLERLIG
GVVIIAMTELGLHAACAMRGKQRGIGLSSKREEETRMTGVKEVVMK

>gi568815595r:122314539_122515528|GENSCAN_predicted_CDS_7|501_bp
nnatccgggcagtcccggagggactcaggagaggccctggggcgagggcgggtgccggca
gggcctagagccggggttcctgggccggacgctcgcgccgcgtccgtgcgtcacgggccc
ggctgtcctaacggccacaaggccggcggaggagaggagcgctgtgacagaggcaggaag
gagcaggggtggcgtgtaaaaattctaaccctggcaaaaagggaccgtcttgggaattca
caagttacagaccgggtcggagccggcggcccggagggaggtgggggaagcggggggtgg
agacggccggctgcagtttaccgatgtcataacaacatgggcctggagcggctgatcggg
ggtgtggtaattatagcaatgacagaacttggtctgcacgccgcgtgtgcgatgcgaggg
aagcagcgaggtatcggattaagctcaaaacgggaggaggaaacaaggatgactggagtc
aaggaagtcgtcatgaagtaa