Result of FASTA (ccds) for pF1KB4374
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB4374, 414 aa
  1>>>pF1KB4374 414 - 414 aa - 414 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.8929+/-0.000818; mu= 14.3893+/- 0.050
 mean_var=75.7558+/-15.374, 0's: 0 Z-trim(108.8): 72  B-trim: 199 in 1/48
 Lambda= 0.147356
 statistics sampled from 10369 (10447) to 10369 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.697), E-opt: 0.2 (0.321), width:  16
 Scan time:  2.980

The best scores are:                                      opt bits E(32554)
CCDS55866.1 ANKS1B gene_id:56899|Hs108|chr12       ( 414) 2812 607.1  1e-173
CCDS55867.1 ANKS1B gene_id:56899|Hs108|chr12       ( 426) 2657 574.1 8.6e-164
CCDS55871.1 ANKS1B gene_id:56899|Hs108|chr12       ( 394) 2412 522.0 3.8e-148
CCDS55864.1 ANKS1B gene_id:56899|Hs108|chr12       ( 254) 1520 332.3 3.2e-91
CCDS55872.1 ANKS1B gene_id:56899|Hs108|chr12       (1248) 1521 332.8 1.1e-90
CCDS55869.1 ANKS1B gene_id:56899|Hs108|chr12       ( 460) 1361 298.6   8e-81
CCDS55868.1 ANKS1B gene_id:56899|Hs108|chr12       ( 450) 1352 296.7   3e-80
CCDS55870.1 ANKS1B gene_id:56899|Hs108|chr12       ( 510) 1352 296.7 3.3e-80
CCDS55865.1 ANKS1B gene_id:56899|Hs108|chr12       ( 357) 1347 295.6 5.1e-80
CCDS4798.1 ANKS1A gene_id:23294|Hs108|chr6         (1134)  655 148.7 2.7e-35
CCDS58742.1 GULP1 gene_id:51454|Hs108|chr2         ( 291)  306 74.2 1.8e-13
CCDS2295.1 GULP1 gene_id:51454|Hs108|chr2          ( 304)  306 74.2 1.8e-13


>>CCDS55866.1 ANKS1B gene_id:56899|Hs108|chr12            (414 aa)
 initn: 2812 init1: 2812 opt: 2812  Z-score: 3232.3  bits: 607.1 E(32554): 1e-173
Smith-Waterman score: 2812; 100.0% identity (100.0% similar) in 414 aa overlap (1-414:1-414)

               10        20        30        40        50        60
pF1KB4 MMWQCHLSAQDYRYYPVDGYSLLKRFPLHPLTGPRCPVQTVGQWLESIGLPQYENHLMAN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 MMWQCHLSAQDYRYYPVDGYSLLKRFPLHPLTGPRCPVQTVGQWLESIGLPQYENHLMAN
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB4 GFDNVQFMGSNVMEDQDLLEIGILNSGHRQRILQAIQLLPKMRPIGHDGYHPTSVAEWLD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 GFDNVQFMGSNVMEDQDLLEIGILNSGHRQRILQAIQLLPKMRPIGHDGYHPTSVAEWLD
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB4 SIELGDYTKAFLINGYTSMDLLKKIWEVELINVLKINLIGHRKRILASLGDRLHDDPPQK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 SIELGDYTKAFLINGYTSMDLLKKIWEVELINVLKINLIGHRKRILASLGDRLHDDPPQK
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB4 PPRSITLRTGDWGEPSITLRPPNEATASTPVQYWQHHPEKLIFQSCDYKAFYLGSMLIKE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 PPRSITLRTGDWGEPSITLRPPNEATASTPVQYWQHHPEKLIFQSCDYKAFYLGSMLIKE
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB4 LRGTESTQDACAKMRANCQKSTEQMKKVPTIILSVSYKGVKFIDATNKNIIAEHEIRNIS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 LRGTESTQDACAKMRANCQKSTEQMKKVPTIILSVSYKGVKFIDATNKNIIAEHEIRNIS
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB4 CAAQDPEDLSTFAYITKDLKSNHHYCHVFTAFDVNLAYEIILTLGQAFEVAYQLALQARK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 CAAQDPEDLSTFAYITKDLKSNHHYCHVFTAFDVNLAYEIILTLGQAFEVAYQLALQARK
              310       320       330       340       350       360

              370       380       390       400       410    
pF1KB4 GGHSSTLPESFENKPSKPIPKPRVSIRKSVDLLHASHTGQEPSERHTEEALRKF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 GGHSSTLPESFENKPSKPIPKPRVSIRKSVDLLHASHTGQEPSERHTEEALRKF
              370       380       390       400       410    

>>CCDS55867.1 ANKS1B gene_id:56899|Hs108|chr12            (426 aa)
 initn: 2736 init1: 2654 opt: 2657  Z-score: 3054.0  bits: 574.1 E(32554): 8.6e-164
Smith-Waterman score: 2657; 96.8% identity (98.0% similar) in 407 aa overlap (1-407:1-399)

               10        20        30        40        50        60
pF1KB4 MMWQCHLSAQDYRYYPVDGYSLLKRFPLHPLTGPRCPVQTVGQWLESIGLPQYENHLMAN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 MMWQCHLSAQDYRYYPVDGYSLLKRFPLHPLTGPRCPVQTVGQWLESIGLPQYENHLMAN
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB4 GFDNVQFMGSNVMEDQDLLEIGILNSGHRQRILQAIQLLPKMRPIGHDGYHPTSVAEWLD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 GFDNVQFMGSNVMEDQDLLEIGILNSGHRQRILQAIQLLPKMRPIGHDGYHPTSVAEWLD
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB4 SIELGDYTKAFLINGYTSMDLLKKIWEVELINVLKINLIGHRKRILASLGDRLHDDPPQK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 SIELGDYTKAFLINGYTSMDLLKKIWEVELINVLKINLIGHRKRILASLGDRLHDDPPQK
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB4 PPRSITLRTGDWGEPSITLRPPNEATASTPVQYWQHHPEKLIFQSCDYKAFYLGSMLIKE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 PPRSITLRTGDWGEPSITLRPPNEATASTPVQYWQHHPEKLIFQSCDYKAFYLGSMLIKE
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB4 LRGTESTQDACAKMRANCQKSTEQMKKVPTIILSVSYKGVKFIDATNKNIIAEHEIRNIS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 LRGTESTQDACAKMRANCQKSTEQMKKVPTIILSVSYKGVKFIDATNKNIIAEHEIRNIS
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB4 CAAQDPEDLSTFAYITKDLKSNHHYCHVFTAFDVNLAYEIILTLGQAFEVAYQLALQARK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 CAAQDPEDLSTFAYITKDLKSNHHYCHVFTAFDVNLAYEIILTLGQAFEVAYQLALQARK
              310       320       330       340       350       360

              370       380       390       400       410          
pF1KB4 GGHSSTLPESFENKPSKPIPKPRVSIRKSVDLLHASHTGQEPSERHTEEALRKF      
       ::::::::::::::::::::::::::::::..        .:::..:             
CCDS55 GGHSSTLPESFENKPSKPIPKPRVSIRKSVQI--------DPSEQKTLANLPWIVEPGQE
              370       380       390               400       410  

CCDS55 AKRGINTKYETTIF
            420      

>>CCDS55871.1 ANKS1B gene_id:56899|Hs108|chr12            (394 aa)
 initn: 2412 init1: 2412 opt: 2412  Z-score: 2773.1  bits: 522.0 E(32554): 3.8e-148
Smith-Waterman score: 2412; 100.0% identity (100.0% similar) in 358 aa overlap (33-390:2-359)

             10        20        30        40        50        60  
pF1KB4 WQCHLSAQDYRYYPVDGYSLLKRFPLHPLTGPRCPVQTVGQWLESIGLPQYENHLMANGF
                                     ::::::::::::::::::::::::::::::
CCDS55                              MGPRCPVQTVGQWLESIGLPQYENHLMANGF
                                            10        20        30 

             70        80        90       100       110       120  
pF1KB4 DNVQFMGSNVMEDQDLLEIGILNSGHRQRILQAIQLLPKMRPIGHDGYHPTSVAEWLDSI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 DNVQFMGSNVMEDQDLLEIGILNSGHRQRILQAIQLLPKMRPIGHDGYHPTSVAEWLDSI
              40        50        60        70        80        90 

            130       140       150       160       170       180  
pF1KB4 ELGDYTKAFLINGYTSMDLLKKIWEVELINVLKINLIGHRKRILASLGDRLHDDPPQKPP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 ELGDYTKAFLINGYTSMDLLKKIWEVELINVLKINLIGHRKRILASLGDRLHDDPPQKPP
             100       110       120       130       140       150 

            190       200       210       220       230       240  
pF1KB4 RSITLRTGDWGEPSITLRPPNEATASTPVQYWQHHPEKLIFQSCDYKAFYLGSMLIKELR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 RSITLRTGDWGEPSITLRPPNEATASTPVQYWQHHPEKLIFQSCDYKAFYLGSMLIKELR
             160       170       180       190       200       210 

            250       260       270       280       290       300  
pF1KB4 GTESTQDACAKMRANCQKSTEQMKKVPTIILSVSYKGVKFIDATNKNIIAEHEIRNISCA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 GTESTQDACAKMRANCQKSTEQMKKVPTIILSVSYKGVKFIDATNKNIIAEHEIRNISCA
             220       230       240       250       260       270 

            310       320       330       340       350       360  
pF1KB4 AQDPEDLSTFAYITKDLKSNHHYCHVFTAFDVNLAYEIILTLGQAFEVAYQLALQARKGG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 AQDPEDLSTFAYITKDLKSNHHYCHVFTAFDVNLAYEIILTLGQAFEVAYQLALQARKGG
             280       290       300       310       320       330 

            370       380       390       400       410            
pF1KB4 HSSTLPESFENKPSKPIPKPRVSIRKSVDLLHASHTGQEPSERHTEEALRKF        
       ::::::::::::::::::::::::::::                                
CCDS55 HSSTLPESFENKPSKPIPKPRVSIRKSVIDPSEQKTLANLPWIVEPGQEAKRGINTKYET
             340       350       360       370       380       390 

>>CCDS55864.1 ANKS1B gene_id:56899|Hs108|chr12            (254 aa)
 initn: 1520 init1: 1520 opt: 1520  Z-score: 1751.2  bits: 332.3 E(32554): 3.2e-91
Smith-Waterman score: 1520; 95.4% identity (97.1% similar) in 240 aa overlap (175-414:15-254)

          150       160       170       180       190       200    
pF1KB4 IWEVELINVLKINLIGHRKRILASLGDRLHDDPPQKPPRSITLRTGDWGEPSITLRPPNE
                                     :: :..  .    .::::::::::::::::
CCDS55                 MQGDARRRRNENYFDDIPRSKLERQMAQTGDWGEPSITLRPPNE
                               10        20        30        40    

          210       220       230       240       250       260    
pF1KB4 ATASTPVQYWQHHPEKLIFQSCDYKAFYLGSMLIKELRGTESTQDACAKMRANCQKSTEQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 ATASTPVQYWQHHPEKLIFQSCDYKAFYLGSMLIKELRGTESTQDACAKMRANCQKSTEQ
           50        60        70        80        90       100    

          270       280       290       300       310       320    
pF1KB4 MKKVPTIILSVSYKGVKFIDATNKNIIAEHEIRNISCAAQDPEDLSTFAYITKDLKSNHH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 MKKVPTIILSVSYKGVKFIDATNKNIIAEHEIRNISCAAQDPEDLSTFAYITKDLKSNHH
          110       120       130       140       150       160    

          330       340       350       360       370       380    
pF1KB4 YCHVFTAFDVNLAYEIILTLGQAFEVAYQLALQARKGGHSSTLPESFENKPSKPIPKPRV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 YCHVFTAFDVNLAYEIILTLGQAFEVAYQLALQARKGGHSSTLPESFENKPSKPIPKPRV
          170       180       190       200       210       220    

          390       400       410    
pF1KB4 SIRKSVDLLHASHTGQEPSERHTEEALRKF
       ::::::::::::::::::::::::::::::
CCDS55 SIRKSVDLLHASHTGQEPSERHTEEALRKF
          230       240       250    

>>CCDS55872.1 ANKS1B gene_id:56899|Hs108|chr12            (1248 aa)
 initn: 1602 init1: 1520 opt: 1521  Z-score: 1741.6  bits: 332.8 E(32554): 1.1e-90
Smith-Waterman score: 2436; 86.2% identity (86.2% similar) in 443 aa overlap (32-414:806-1248)

              10        20        30        40        50        60 
pF1KB4 MWQCHLSAQDYRYYPVDGYSLLKRFPLHPLTGPRCPVQTVGQWLESIGLPQYENHLMANG
                                     : ::::::::::::::::::::::::::::
CCDS55 FTSEWEEIDKIMSSIDVGINNELKEMNGETTRPRCPVQTVGQWLESIGLPQYENHLMANG
         780       790       800       810       820       830     

              70        80        90       100       110       120 
pF1KB4 FDNVQFMGSNVMEDQDLLEIGILNSGHRQRILQAIQLLPKMRPIGHDGYHPTSVAEWLDS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 FDNVQFMGSNVMEDQDLLEIGILNSGHRQRILQAIQLLPKMRPIGHDGYHPTSVAEWLDS
         840       850       860       870       880       890     

             130       140       150       160       170       180 
pF1KB4 IELGDYTKAFLINGYTSMDLLKKIWEVELINVLKINLIGHRKRILASLGDRLHDDPPQKP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 IELGDYTKAFLINGYTSMDLLKKIWEVELINVLKINLIGHRKRILASLGDRLHDDPPQKP
         900       910       920       930       940       950     

                                                                   
pF1KB4 PRSITLR-----------------------------------------------------
       :::::::                                                     
CCDS55 PRSITLREPSGNHTPPQLSPSLSQSTYTTGGSLDVPHIIMQGDARRRRNENYFDDIPRSK
         960       970       980       990      1000      1010     

             190       200       210       220       230       240 
pF1KB4 -------TGDWGEPSITLRPPNEATASTPVQYWQHHPEKLIFQSCDYKAFYLGSMLIKEL
              :::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 LERQMAQTGDWGEPSITLRPPNEATASTPVQYWQHHPEKLIFQSCDYKAFYLGSMLIKEL
        1020      1030      1040      1050      1060      1070     

             250       260       270       280       290       300 
pF1KB4 RGTESTQDACAKMRANCQKSTEQMKKVPTIILSVSYKGVKFIDATNKNIIAEHEIRNISC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 RGTESTQDACAKMRANCQKSTEQMKKVPTIILSVSYKGVKFIDATNKNIIAEHEIRNISC
        1080      1090      1100      1110      1120      1130     

             310       320       330       340       350       360 
pF1KB4 AAQDPEDLSTFAYITKDLKSNHHYCHVFTAFDVNLAYEIILTLGQAFEVAYQLALQARKG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 AAQDPEDLSTFAYITKDLKSNHHYCHVFTAFDVNLAYEIILTLGQAFEVAYQLALQARKG
        1140      1150      1160      1170      1180      1190     

             370       380       390       400       410    
pF1KB4 GHSSTLPESFENKPSKPIPKPRVSIRKSVDLLHASHTGQEPSERHTEEALRKF
       :::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 GHSSTLPESFENKPSKPIPKPRVSIRKSVDLLHASHTGQEPSERHTEEALRKF
        1200      1210      1220      1230      1240        

>>CCDS55869.1 ANKS1B gene_id:56899|Hs108|chr12            (460 aa)
 initn: 1360 init1: 1360 opt: 1361  Z-score: 1564.5  bits: 298.6 E(32554): 8e-81
Smith-Waterman score: 2312; 85.8% identity (85.8% similar) in 422 aa overlap (29-390:29-450)

               10        20        30        40        50        60
pF1KB4 MMWQCHLSAQDYRYYPVDGYSLLKRFPLHPLTGPRCPVQTVGQWLESIGLPQYENHLMAN
                                   ::::::::::::::::::::::::::::::::
CCDS55 MMWQCHLSAQDYRYYPVDGYSLLKRFPLHPLTGPRCPVQTVGQWLESIGLPQYENHLMAN
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB4 GFDNVQFMGSNVMEDQDLLEIGILNSGHRQRILQAIQLLPKMRPIGHDGYHPTSVAEWLD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 GFDNVQFMGSNVMEDQDLLEIGILNSGHRQRILQAIQLLPKMRPIGHDGYHPTSVAEWLD
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB4 SIELGDYTKAFLINGYTSMDLLKKIWEVELINVLKINLIGHRKRILASLGDRLHDDPPQK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 SIELGDYTKAFLINGYTSMDLLKKIWEVELINVLKINLIGHRKRILASLGDRLHDDPPQK
              130       140       150       160       170       180

                                                                   
pF1KB4 PPRSITLR----------------------------------------------------
       ::::::::                                                    
CCDS55 PPRSITLREPSGNHTPPQLSPSLSQSTYTTGGSLDVPHIIMQGDARRRRNENYFDDIPRS
              190       200       210       220       230       240

              190       200       210       220       230       240
pF1KB4 --------TGDWGEPSITLRPPNEATASTPVQYWQHHPEKLIFQSCDYKAFYLGSMLIKE
               ::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 KLERQMAQTGDWGEPSITLRPPNEATASTPVQYWQHHPEKLIFQSCDYKAFYLGSMLIKE
              250       260       270       280       290       300

              250       260       270       280       290       300
pF1KB4 LRGTESTQDACAKMRANCQKSTEQMKKVPTIILSVSYKGVKFIDATNKNIIAEHEIRNIS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 LRGTESTQDACAKMRANCQKSTEQMKKVPTIILSVSYKGVKFIDATNKNIIAEHEIRNIS
              310       320       330       340       350       360

              310       320       330       340       350       360
pF1KB4 CAAQDPEDLSTFAYITKDLKSNHHYCHVFTAFDVNLAYEIILTLGQAFEVAYQLALQARK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 CAAQDPEDLSTFAYITKDLKSNHHYCHVFTAFDVNLAYEIILTLGQAFEVAYQLALQARK
              370       380       390       400       410       420

              370       380       390       400       410    
pF1KB4 GGHSSTLPESFENKPSKPIPKPRVSIRKSVDLLHASHTGQEPSERHTEEALRKF
       ::::::::::::::::::::::::::::::                        
CCDS55 GGHSSTLPESFENKPSKPIPKPRVSIRKSVPFCFKADRPI              
              430       440       450       460              

>>CCDS55868.1 ANKS1B gene_id:56899|Hs108|chr12            (450 aa)
 initn: 2642 init1: 1349 opt: 1352  Z-score: 1554.3  bits: 296.7 E(32554): 3e-80
Smith-Waterman score: 2599; 91.4% identity (92.6% similar) in 431 aa overlap (1-407:1-423)

               10        20        30        40        50        60
pF1KB4 MMWQCHLSAQDYRYYPVDGYSLLKRFPLHPLTGPRCPVQTVGQWLESIGLPQYENHLMAN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 MMWQCHLSAQDYRYYPVDGYSLLKRFPLHPLTGPRCPVQTVGQWLESIGLPQYENHLMAN
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB4 GFDNVQFMGSNVMEDQDLLEIGILNSGHRQRILQAIQLLPKMRPIGHDGYHPTSVAEWLD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 GFDNVQFMGSNVMEDQDLLEIGILNSGHRQRILQAIQLLPKMRPIGHDGYHPTSVAEWLD
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB4 SIELGDYTKAFLINGYTSMDLLKKIWEVELINVLKINLIGHRKRILASLGDRLHDDPPQK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 SIELGDYTKAFLINGYTSMDLLKKIWEVELINVLKINLIGHRKRILASLGDRLHDDPPQK
              130       140       150       160       170       180

                                      190       200       210      
pF1KB4 PPRSITLR------------------------TGDWGEPSITLRPPNEATASTPVQYWQH
       ::::::::                        ::::::::::::::::::::::::::::
CCDS55 PPRSITLRSSVCEIWTNQNAGFPFSAIHQVHNTGDWGEPSITLRPPNEATASTPVQYWQH
              190       200       210       220       230       240

        220       230       240       250       260       270      
pF1KB4 HPEKLIFQSCDYKAFYLGSMLIKELRGTESTQDACAKMRANCQKSTEQMKKVPTIILSVS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 HPEKLIFQSCDYKAFYLGSMLIKELRGTESTQDACAKMRANCQKSTEQMKKVPTIILSVS
              250       260       270       280       290       300

        280       290       300       310       320       330      
pF1KB4 YKGVKFIDATNKNIIAEHEIRNISCAAQDPEDLSTFAYITKDLKSNHHYCHVFTAFDVNL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 YKGVKFIDATNKNIIAEHEIRNISCAAQDPEDLSTFAYITKDLKSNHHYCHVFTAFDVNL
              310       320       330       340       350       360

        340       350       360       370       380       390      
pF1KB4 AYEIILTLGQAFEVAYQLALQARKGGHSSTLPESFENKPSKPIPKPRVSIRKSVDLLHAS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::..    
CCDS55 AYEIILTLGQAFEVAYQLALQARKGGHSSTLPESFENKPSKPIPKPRVSIRKSVQI----
              370       380       390       400       410          

        400       410                        
pF1KB4 HTGQEPSERHTEEALRKF                    
           .:::..:                           
CCDS55 ----DPSEQKTLANLPWIVEPGQEAKRGINTKYETTIF
            420       430       440       450

>>CCDS55870.1 ANKS1B gene_id:56899|Hs108|chr12            (510 aa)
 initn: 2640 init1: 1349 opt: 1352  Z-score: 1553.5  bits: 296.7 E(32554): 3.3e-80
Smith-Waterman score: 2088; 77.9% identity (79.0% similar) in 439 aa overlap (53-407:53-483)

             30        40        50        60        70        80  
pF1KB4 LKRFPLHPLTGPRCPVQTVGQWLESIGLPQYENHLMANGFDNVQFMGSNVMEDQDLLEIG
                                     ::::::::::::::::::::::::::::::
CCDS55 LKRFPLHPLTGPRCPVQTVGQWLESIGLPQYENHLMANGFDNVQFMGSNVMEDQDLLEIG
             30        40        50        60        70        80  

             90       100       110       120       130       140  
pF1KB4 ILNSGHRQRILQAIQLLPKMRPIGHDGYHPTSVAEWLDSIELGDYTKAFLINGYTSMDLL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 ILNSGHRQRILQAIQLLPKMRPIGHDGYHPTSVAEWLDSIELGDYTKAFLINGYTSMDLL
             90       100       110       120       130       140  

            150       160       170       180                      
pF1KB4 KKIWEVELINVLKINLIGHRKRILASLGDRLHDDPPQKPPRSITLR--------------
       ::::::::::::::::::::::::::::::::::::::::::::::              
CCDS55 KKIWEVELINVLKINLIGHRKRILASLGDRLHDDPPQKPPRSITLREPSGNHTPPQLSPS
            150       160       170       180       190       200  

                                                                   
pF1KB4 ------------------------------------------------------------
                                                                   
CCDS55 LSQSTYTTGGSLDVPHIIMQGDARRRRNENYFDDIPRSKLERQMAQSSVCEIWTNQNAGF
            210       220       230       240       250       260  

                190       200       210       220       230        
pF1KB4 ----------TGDWGEPSITLRPPNEATASTPVQYWQHHPEKLIFQSCDYKAFYLGSMLI
                 ::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 PFSAIHQVHNTGDWGEPSITLRPPNEATASTPVQYWQHHPEKLIFQSCDYKAFYLGSMLI
            270       280       290       300       310       320  

      240       250       260       270       280       290        
pF1KB4 KELRGTESTQDACAKMRANCQKSTEQMKKVPTIILSVSYKGVKFIDATNKNIIAEHEIRN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 KELRGTESTQDACAKMRANCQKSTEQMKKVPTIILSVSYKGVKFIDATNKNIIAEHEIRN
            330       340       350       360       370       380  

      300       310       320       330       340       350        
pF1KB4 ISCAAQDPEDLSTFAYITKDLKSNHHYCHVFTAFDVNLAYEIILTLGQAFEVAYQLALQA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 ISCAAQDPEDLSTFAYITKDLKSNHHYCHVFTAFDVNLAYEIILTLGQAFEVAYQLALQA
            390       400       410       420       430       440  

      360       370       380       390       400       410        
pF1KB4 RKGGHSSTLPESFENKPSKPIPKPRVSIRKSVDLLHASHTGQEPSERHTEEALRKF    
       ::::::::::::::::::::::::::::::::..        .:::..:           
CCDS55 RKGGHSSTLPESFENKPSKPIPKPRVSIRKSVQI--------DPSEQKTLANLPWIVEPG
            450       460       470               480       490    

CCDS55 QEAKRGINTKYETTIF
          500       510

>--
 initn: 391 init1: 391 opt: 391  Z-score: 449.3  bits: 92.4 E(32554): 1e-18
Smith-Waterman score: 391; 100.0% identity (100.0% similar) in 52 aa overlap (1-52:1-52)

               10        20        30        40        50        60
pF1KB4 MMWQCHLSAQDYRYYPVDGYSLLKRFPLHPLTGPRCPVQTVGQWLESIGLPQYENHLMAN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::        
CCDS55 MMWQCHLSAQDYRYYPVDGYSLLKRFPLHPLTGPRCPVQTVGQWLESIGLPQYENHLMAN
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB4 GFDNVQFMGSNVMEDQDLLEIGILNSGHRQRILQAIQLLPKMRPIGHDGYHPTSVAEWLD
                                                                   
CCDS55 GFDNVQFMGSNVMEDQDLLEIGILNSGHRQRILQAIQLLPKMRPIGHDGYHPTSVAEWLD
               70        80        90       100       110       120

>>CCDS55865.1 ANKS1B gene_id:56899|Hs108|chr12            (357 aa)
 initn: 1969 init1: 1347 opt: 1347  Z-score: 1550.1  bits: 295.6 E(32554): 5.1e-80
Smith-Waterman score: 1933; 90.1% identity (92.8% similar) in 333 aa overlap (58-390:1-322)

        30        40        50        60        70        80       
pF1KB4 LHPLTGPRCPVQTVGQWLESIGLPQYENHLMANGFDNVQFMGSNVMEDQDLLEIGILNSG
                                     ::::::::::::::::::::::::::::::
CCDS55                               MANGFDNVQFMGSNVMEDQDLLEIGILNSG
                                             10        20        30

        90       100       110       120       130       140       
pF1KB4 HRQRILQAIQLLPKMRPIGHDGYHPTSVAEWLDSIELGDYTKAFLINGYTSMDLLKKIWE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 HRQRILQAIQLLPKMRPIGHDGYHPTSVAEWLDSIELGDYTKAFLINGYTSMDLLKKIWE
               40        50        60        70        80        90

       150       160       170       180       190       200       
pF1KB4 VELINVLKINLIGHRKRILASLGDRLHDDPPQKPPRSITLRTGDWGEPSITLRPPNEATA
       :::::  ..  :   .   :..        : .  ...   :::::::::::::::::::
CCDS55 VELINQSSVCEIWTNQN--AGF--------PFSAIHQVH-NTGDWGEPSITLRPPNEATA
              100         110                120       130         

       210       220       230       240       250       260       
pF1KB4 STPVQYWQHHPEKLIFQSCDYKAFYLGSMLIKELRGTESTQDACAKMRANCQKSTEQMKK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 STPVQYWQHHPEKLIFQSCDYKAFYLGSMLIKELRGTESTQDACAKMRANCQKSTEQMKK
     140       150       160       170       180       190         

       270       280       290       300       310       320       
pF1KB4 VPTIILSVSYKGVKFIDATNKNIIAEHEIRNISCAAQDPEDLSTFAYITKDLKSNHHYCH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 VPTIILSVSYKGVKFIDATNKNIIAEHEIRNISCAAQDPEDLSTFAYITKDLKSNHHYCH
     200       210       220       230       240       250         

       330       340       350       360       370       380       
pF1KB4 VFTAFDVNLAYEIILTLGQAFEVAYQLALQARKGGHSSTLPESFENKPSKPIPKPRVSIR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 VFTAFDVNLAYEIILTLGQAFEVAYQLALQARKGGHSSTLPESFENKPSKPIPKPRVSIR
     260       270       280       290       300       310         

       390       400       410               
pF1KB4 KSVDLLHASHTGQEPSERHTEEALRKF           
       :::                                   
CCDS55 KSVIDPSEQKTLANLPWIVEPGQEAKRGINTKYETTIF
     320       330       340       350       

>>CCDS4798.1 ANKS1A gene_id:23294|Hs108|chr6              (1134 aa)
 initn: 1679 init1: 639 opt: 655  Z-score: 747.3  bits: 148.7 E(32554): 2.7e-35
Smith-Waterman score: 1507; 58.2% identity (75.8% similar) in 414 aa overlap (31-389:691-1100)

               10        20        30        40        50        60
pF1KB4 MMWQCHLSAQDYRYYPVDGYSLLKRFPLHPLTGPRCPVQTVGQWLESIGLPQYENHLMAN
                                     ..: :   :.::.::::::: :::..:. :
CCDS47 SPSFASEWDEIEKIMSSIGEGIDFSQERQKISGLRTLEQSVGEWLESIGLQQYESKLLLN
              670       680       690       700       710       720

               70        80        90       100       110       120
pF1KB4 GFDNVQFMGSNVMEDQDLLEIGILNSGHRQRILQAIQLLPKMRPIGHDGYHPTSVAEWLD
       :::.:.:.::::::.::: .::: .  ::...::: . :::.. .:.::  : ::  :::
CCDS47 GFDDVHFLGSNVMEEQDLRDIGISDPQHRRKLLQAARSLPKVKALGYDGNSPPSVPSWLD
              730       740       750       760       770       780

              130       140       150       160       170       180
pF1KB4 SIELGDYTKAFLINGYTSMDLLKKIWEVELINVLKINLIGHRKRILASLGDRLHDDPPQK
       :. : ::...:: .::.:.: .:..::.::.::::..:.::::::.:::.:: ...::::
CCDS47 SLGLQDYVHSFLSSGYSSIDTVKNLWELELVNVLKVQLLGHRKRIIASLADRPYEEPPQK
              790       800       810       820       830       840

                                          190                      
pF1KB4 PPRSITLRT----------------------------GDWGE-----------PS-----
       :::   ::                             :: :.           ::     
CCDS47 PPRFSQLRCQDLLSQTSSPLSQNDSCTGRSADLLLPPGDTGRRRHDSLHDPAAPSRAERF
              850       860       870       880       890       900

                  200       210       220       230       240      
pF1KB4 ----------ITLRPPNEATASTPVQYWQHHPEKLIFQSCDYKAFYLGSMLIKELRGTES
                 .:::::. :.  .::: :::.::::::.:: :.: ::::::::.::::::
CCDS47 RIQEEHREAKLTLRPPSLAAPYAPVQSWQHQPEKLIFESCGYEANYLGSMLIKDLRGTES
              910       920       930       940       950       960

        250       260       270       280       290       300      
pF1KB4 TQDACAKMRANCQKSTEQMKKVPTIILSVSYKGVKFIDATNKNIIAEHEIRNISCAAQDP
       :::::::::    ::::.:::.::::::..:::::::::.:::.::::::::::::::::
CCDS47 TQDACAKMR----KSTEHMKKIPTIILSITYKGVKFIDASNKNVIAEHEIRNISCAAQDP
                  970       980       990      1000      1010      

        310       320       330       340       350       360      
pF1KB4 EDLSTFAYITKDLKSNHHYCHVFTAFDVNLAYEIILTLGQAFEVAYQLALQARKG-GHSS
       ::: :::::::::...:::::::.. ::::.:::::::::::::::::::::.:. . ..
CCDS47 EDLCTFAYITKDLQTSHHYCHVFSTVDVNLTYEIILTLGQAFEVAYQLALQAQKSRATGA
       1020      1030      1040      1050      1060      1070      

         370       380       390       400       410             
pF1KB4 TLPESFENKPSKPIPKPRVSIRKSVDLLHASHTGQEPSERHTEEALRKF         
       .  : .:.: :::.:::::..:::                                  
CCDS47 SAAEMIETKSSKPVPKPRVGVRKSALEPPDMDQDAQSHASVSWVVDPKPDSKRSLSTN
       1080      1090      1100      1110      1120      1130    




414 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sat Nov  5 05:49:03 2016 done: Sat Nov  5 05:49:03 2016
 Total Scan time:  2.980 Total Display time:  0.060

Function used was FASTA [36.3.4 Apr, 2011]
Inquiries or Suggestions ?
Send a message to flexiclone AT kazusagt.com