GENSCAN 1.0	Date run:  5-Nov-116	Time: 05:46:26

Sequence gi568815594f:77058533_77265921 : 207389 bp : 42.38% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.08 PlyA -    317    312    6                               1.05
 1.07 Term -   7873   7766  108  1  0   72   50    82 0.297   0.33
 1.06 Intr -  17079  16940  140  1  2  113  100    62 0.816   9.16
 1.05 Intr -  17745  17568  178  0  1   27   29   156 0.402   2.17
 1.04 Intr -  18098  18036   63  2  0   61  107    35 0.495   0.70
 1.03 Intr -  24099  23858  242  1  2   16   50   251 0.641  10.45
 1.02 Intr -  24562  24429  134  0  2   19   -2   169 0.219   0.37
 1.01 Init -  31398  31346   53  0  2   77   64    34 0.064   0.59
 1.00 Prom -  36509  36470   40                              -6.25

 2.02 PlyA -  37729  37724    6                               1.05
 2.01 Sngl -  54911  54033  879  2  0   81   39   886 0.979  78.74
 2.00 Prom -  55740  55701   40                              -8.25

 3.00 Prom +  56091  56130   40                              -4.45
 3.01 Init +  57473  57561   89  1  2   70   90     5 0.442  -0.93
 3.02 Intr +  61913  62094  182  2  2  -18   99   156 0.437   4.69
 3.03 Term +  69378  69565  188  1  2   84   53   171 0.792   9.87
 3.04 PlyA +  73171  73176    6                               1.05

 4.00 Prom +  89165  89204   40                              -6.15
 4.01 Init +  92387  92433   47  1  2   96   37    88 0.266   4.71
 4.02 Intr +  95434  95630  197  1  2   29   70    91 0.135  -0.46
 4.03 Intr +  99969 100138  170  1  2  104  107   104 0.917  12.64
 4.04 Intr + 100835 100972  138  1  0   95   63    86 0.867   6.54
 4.05 Intr + 102189 102439  251  2  2   84   86    42 0.885  -1.09
 4.06 Intr + 102948 103026   79  0  1   60  106    83 0.966   5.93
 4.07 Intr + 103117 103215   99  0  0  105   86    12 0.809   2.09
 4.08 Intr + 105742 105947  206  0  2   91  102    97 0.922   8.48
 4.09 Intr + 119531 119592   62  2  2   92   48    21 0.001  -4.04
 4.10 Term + 125123 125307  185  0  2   92   48   128 0.823   5.92
 4.11 PlyA + 125403 125408    6                               1.05

 5.00 Prom + 126238 126277   40                              -5.65
 5.01 Init + 128328 128387   60  2  0   88   81    35 0.777   4.11
 5.02 Intr + 132129 132156   28  2  1  120  110     8 0.650   2.97
 5.03 Term + 135602 135750  149  0  2   94   41   113 0.866   4.28
 5.04 PlyA + 136454 136459    6                               1.05

 6.00 Prom + 136995 137034   40                              -2.35
 6.01 Init + 150114 150161   48  2  0   95   84     7 0.062   2.08
 6.02 Term + 154499 154702  204  1  0   85   32   134 0.135   3.89
 6.03 PlyA + 162168 162173    6                               1.05

 7.11 PlyA - 162899 162894    6                               1.05
 7.10 Term - 165728 165535  194  0  2   68   33   194 0.887   8.50
 7.09 Intr - 169192 169147   46  1  1   58   67    57 0.207  -2.34
 7.08 Intr - 172598 172383  216  2  0   33   81   119 0.131   3.48
 7.07 Intr - 176939 176811  129  2  0   50   43    89 0.074   0.57
 7.06 Intr - 177832 177808   25  0  1  131   93    14 0.277   3.31
 7.05 Intr - 184971 184745  227  0  2   20   53   165 0.320   2.06
 7.04 Intr - 185185 185053  133  0  1   43   70    81 0.446   1.53
 7.03 Intr - 189271 188999  273  0  0   74   56   145 0.102   5.63
 7.02 Intr - 202996 202898   99  0  0   29  103    90 0.166   2.91
 7.01 Intr - 203587 203285  303  0  0   21   77   167 0.320   3.68

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Intr -  37100  37036   65  2  2   71  111   121 0.988   9.30
S.002 Init -  38006  37935   72  2  0   65   81    60 0.954   4.12
S.003 Sngl +  89462  89749  288  1  0   29   46   211 0.912   6.34
S.004 Init + 123335 123464  130  1  1   40   79   108 0.894   3.51


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815594f:77058533_77265921|GENSCAN_predicted_peptide_1|305_aa
MSRAGERLPQQECQATIRKSPEKGEGLSSPQSHPGKAGTFGKEGAKEKSSGLSDWNHSNM
IPENTVIEEHLGKFGVICLEDLIHETAFPGKHFQESSWFLCPFHHSVARHATKNRVGFLK
EMGTAGYQGECINQLIRQLNQTQNLPPPTQCGSEKNRNSIYMSTQPFRSFKENESTDLRL
FLATRKRPPSFHPSANDFPSPSPFGRTSLYFRWTGKAAGRNRKVGRVVPRAPPPRAYENE
VVTGPRMTPRHHCEAYSSAGEEEEEEEEEKVATASWVAGRSKGYHEVSRAFGKPEIVFPV
GKGNH

>gi568815594f:77058533_77265921|GENSCAN_predicted_CDS_1|918_bp
atgagcagagcaggagagaggctcccacaacaggaatgtcaggcaaccatcagaaaatct
cctgaaaaaggtgaaggcttatcaagccctcaaagccacccaggcaaagcaggcactttt
ggcaaagaaggagcaaaggaaaagagctcaggtttaagcgactggaatcattccaacatg
attcctgaaaacacagtgattgaggagcacctggggaagtttggtgtcatttgcttggaa
gacctcattcatgaaactgccttcccagggaagcatttccaggagagctcatggttcttg
tgccctttccaccactcagtggcccgtcatgctaccaaaaatagagtgggcttcctcaag
gagatgggcacagctggctatcagggtgaatgcatcaatcagctcatccgccagctgaac
cagacccagaatctccctccacccacacaatgtggcagtgagaaaaaccgcaattctatt
tacatgtcaacgcaacccttccgctccttcaaggaaaatgagtccacggaccttcggctt
ttcttagccacgagaaaacgtcctccctccttccatcctagtgccaacgacttccccagc
ccgtctcctttcggccgcacttctctgtactttcgttggaccgggaaggcggcggggagg
aacaggaaggttggccgagtcgtcccgcgcgcaccgcctccgcgcgcctatgagaatgag
gtggtaacgggcccccggatgaccccgcgtcaccactgtgaggcctacagctctgccggg
gaggaggaggaggaggaagaggaggagaaggtagctacagcaagctgggtagcaggcaga
tccaaaggatatcatgaagtttccagggcctttggaaaaccagagattgtctttcctgtt
ggaaaaggcaatcactag

>gi568815594f:77058533_77265921|GENSCAN_predicted_peptide_2|292_aa
MAAAGAPDGMEEPGMDTEAKTVATEALARPLNCLEAEATAGAGAGTVAEDSGTARGSLQP
AAGPSPGPWRPRVPGFCQQRRRLGRQRRQRAGGPEDHLEQDQARREVPPGQHRLRTETED
PLITGLPPAIQKVMYKGLVPEDKTLREIKVTSGAKIMVVGSTINDVLAVNTPKDAAQQDA
KAKDNKKEPLCRQKQHRKALDKGKPEDVMPSVKGAQEHLQKVPLPSMYNKSGGKVRFTLK
LEQHRLWIGSKERTEKLPMGSIKNVVSEHMEGHEDYHMMGFSWAPRKPLTTD

>gi568815594f:77058533_77265921|GENSCAN_predicted_CDS_2|879_bp
atggcagcggccggggccccggatggcatggaggaacctggcatggacaccgaagctaag
accgtggcgaccgaggcgctggcacggcccctcaactgcttggaggccgaagccacggca
ggagcgggggcagggacggtggccgaggactccggcaccgcgcgaggcagcctgcagcct
gcagccggccccagcccaggcccctggagaccccgtgtcccaggcttctgtcagcaacgg
cgaagactcgggcggcagcgcagacagcgagctggtggacctgaggatcatctggaacaa
gaccaagcacgacgtgaagttccccctggacagcacaggctccgaactgaaacagaagat
ccactgattacaggtctcccgcctgccatacagaaagtcatgtataagggactcgtccct
gaggataagacattgagagaaataaaagtgaccagtggggccaagatcatggtggttggc
tccaccatcaatgatgttttagcagtaaacacacccaaagatgctgcgcagcaggatgca
aaggccaaagacaacaagaaggagcctctctgcaggcagaaacaacacaggaaagcgttg
gataaaggaaaacccgaagatgtgatgccatctgttaagggggcccaggagcacctacaa
aaggtacccctgcccagcatgtacaataagtccggaggaaaagtgagattcaccttgaag
ttagaacaacaccgactgtggattggcagtaaagagcggactgagaaattgcccatggga
tccataaaaaatgtggtcagtgaacatatggaaggacatgaagactaccacatgatgggt
ttcagttgggccccacgaaagcctcttactactgactaa

>gi568815594f:77058533_77265921|GENSCAN_predicted_peptide_3|152_aa
MGTHTLLGPSLIGFGLNYLGSEQPNRREQGSKKPGLINWTKLVFYTINLPSEADGDLVSS
SSSIQHLGESSPGIHFVYPISLSYFFKGAIGTRVAYFTQSAVHERLSVNSSVKGQGDSLL
HLPFLTPEFLFGVQEESGHTNCVKDDECGRPY

>gi568815594f:77058533_77265921|GENSCAN_predicted_CDS_3|459_bp
atggggacacacaccttgctgggccccagtctaataggttttggattgaattacttggga
agtgaacaaccaaatagaagggaacaagggagcaaaaagccagggctgatcaactggacc
aagttggtgttctacaccatcaacctgcccagtgaagcagatggagacctggtgtcttca
agtagcagcatccagcatttgggtgaatcaagtccaggaattcactttgtttatcctatt
tcactgagttatttttttaaaggggcaattggaactagagtggcttatttcactcagtct
gcagtccatgaacgtttaagtgttaacagctcagtgaagggtcagggtgacagcctcttg
cacctgccatttttgacacccgagttcttgttcggtgtccaggaagaatcaggtcacacg
aactgtgtgaaggatgatgaatgtggaagaccttattga

>gi568815594f:77058533_77265921|GENSCAN_predicted_peptide_4|477_aa
MPALKMEEEPQAKERSMPGTQCVFTKFRLNKKLGFIVKNHIFEEKDDIWKIVAILMPYEV
QGSLSHLGKHCNCPMRVPYFQDYILCVVSLLQMKDLGAEHLAGHEGVQLLGLLNVYLEQE
ERFQPREKGLSLIEATPENDNTLCPGLRNAKVEDLRSLANFFGSCTETFVLAVNILDRFL
ALMKVKPKHLSCIGVCSFLLAARIVEEDCNIPSTHDVIRISQCKCTASDIKRMEKIISEK
LHYELEATTALNFLHLYHTIILCHTSERKEILSLDKLEAQLKACNCRLIFSKAKPSVLAL
CLLNLEVETLKSVELLEILLLVKKHSKINDTEFFYWRELVSKCLAEYSSPECCKPDLKKL
VWIVSRRTAQNLHNSYYSVPELPTIPEGGCFDESERIHGKLNGNQKVHAWAAWPQNRLPI
GPTRSQGAQEPTGVVHELSFLGGKHNGEEQRVGLKDKEKTLCPFPCLSSFRDGSGQL

>gi568815594f:77058533_77265921|GENSCAN_predicted_CDS_4|1434_bp
atgccggctttaaagatggaggaagagccacaagccaaggaacgcagcatgcctggcact
cagtgtgtattcactaaatttcgattgaataaaaagctaggatttattgtcaaaaaccat
atctttgaggagaaagatgatatttggaaaattgtagcaattttgatgccttatgaagtt
cagggaagtctaagtcatttagggaagcactgcaactgtcccatgagagtgccctatttt
caagattacattctctgtgtggtgtctttactgcagatgaaggatttgggggcagagcac
ttggcaggtcatgaaggggtccaacttctcgggttgttgaacgtctacctggaacaagaa
gagagattccaacctcgagaaaaagggctgagtttgattgaggctaccccggagaatgat
aacactttgtgtccaggattgagaaatgccaaagttgaagatttaaggagtttagccaac
ttttttggatcttgcactgaaacttttgtcctggctgtcaatattttggacaggttcttg
gctcttatgaaggtgaaacctaaacatttgtcttgcattggagtctgttcttttttgctg
gctgctagaatagttgaagaagactgcaatattccatccactcatgatgtgatccggatt
agtcagtgtaaatgtactgcttctgacataaaacggatggaaaaaataatttcagaaaaa
ttgcactatgaattggaagctactactgccttaaactttttgcacttataccatactatt
atactttgtcatacttcagaaaggaaagaaatactgagccttgataaactagaagctcag
ctgaaagcttgcaactgccgactcatcttttcaaaagcaaaaccatctgtattagccttg
tgccttctcaatttggaagtggaaactttgaaatctgttgaattactggaaattctcttg
ctagttaaaaaacattccaagattaatgacactgagttcttctactggagagagttggtt
tctaaatgcctagccgagtattcttctcctgaatgttgcaaaccagatcttaagaagttg
gtttggatcgtttcaaggcgcacagcccagaacctccacaacagctactatagtgttcct
gagctgccaacgatacctgaggggggttgttttgatgaaagtgaaagaatacatgggaaa
ttgaacggtaatcagaaggtccatgcttgggcagcatggccacagaacaggctccccatt
ggcccaactagaagccagggagcacaagagcctactggtgtagttcatgaactcagtttc
ctgggtggaaagcacaatggagaagagcagagagtgggtctgaaggacaaagagaagaca
ctgtgtcccttcccttgtttgtcctctttcagagatggttctggacaactctag

>gi568815594f:77058533_77265921|GENSCAN_predicted_peptide_5|78_aa
MTHADCITGSLPFGFWMVWPAVLCSVLTTDFSKATLIANLLKLRKLQEKYTGLEVLRLKQ
AQQSLELPFSYLESQSLY

>gi568815594f:77058533_77265921|GENSCAN_predicted_CDS_5|237_bp
atgacccacgctgactgcatcactggctccttgccttttggcttctggatggtttggcca
gcagtgctgtgtagtgtgctgactacagactttagcaaagccactcttatagctaactta
ctgaagttacgtaaactccaagagaaatacacgggtttagaggttctacgtttaaagcaa
gcgcagcaatctttagaacttccttttagctatttggaatcccaaagtctctattaa

>gi568815594f:77058533_77265921|GENSCAN_predicted_peptide_6|83_aa
MEPLLWVGACPGVSFGVMAAAVCQFTEHQDHSPSNPLSCRHANSCCHLVTAMQTHHDRAN
YYQQSRPVLSLLDYWFKESKMIA

>gi568815594f:77058533_77265921|GENSCAN_predicted_CDS_6|252_bp
atggagcccctgctttgggttggtgcttgccctggtgtgtcctttggggtcatggctgct
gcagtttgccaattcactgagcaccaagaccactctccttcaaatcccctgagttgtaga
catgccaattcctgctgccacctagtaacagcaatgcaaactcaccatgatagggctaat
tactatcagcaaagcagacctgtgctgtccctgctggactactggtttaaggagtccaaa
atgatagcctaa

>gi568815594f:77058533_77265921|GENSCAN_predicted_peptide_7|548_aa
XYILEETRIYTIKREKPRFQVKLGLYPERRLISSPHGWVQPRHGTQVVSLPEQRAKGNTQ
GEAHQYFHASAPSPPGPHHPGLSLQGLAAFSTERGQMCPAARQAVRDFYIRGEKSKTSLD
AFYCRPYVELTGTSWLKIWVLPPGKREPSAEITAEAKGNLAVDIGGERMRIRCDPRSHYS
HRSCILSQHLEFTQERRPEGHGVAALRACVARSLCAAQGLTWQPLSLGYDHWQCENGLVN
LSLLYTKSQIKADIGPGAHTLSGRNIQIMTFHVYTKGSLILKYGTELSTRADSSNSSGRS
KGNHRKSLAVSFPSFFYLDSFQGKTIIPSKGKASSRTEPLDTDGQGCGAQDHSLPLHDFR
QQHLQPFCSTALGFLDPFACVRTHMQPESPIADLPNQGIQAYPEDPQQETKELVTSCYFS
TLHQGCLSNLMPKPCIYISSPKTQDNTNGFANLAQATQLDDKLLFTWILGSLGKAASEIG
EGPQGLSECLSEEGKDGMALGQEILKLQATFDQGREKSFRWSKPFRLTLNYLDLYMLRSS
DAERAFNS

>gi568815594f:77058533_77265921|GENSCAN_predicted_CDS_7|1647_bp
nnctacatcttagaggaaactagaatatatacaatcaagagggaaaagccaagattccaa
gtcaagctgggcctttacccggaaaggagactcatctcctcacctcacggatgggtccag
ccaagacatgggactcaggtagtaagcctccctgagcagagagcaaaagggaatactcaa
ggagaagcacatcagtacttccatgcttctgctccatctccaccaggaccacaccatcct
ggcctgtcactacaaggcctagctgccttttctacagaaaggggacagatgtgtcctgca
gctagacaagcagttcgagatttctacatccggggtgaaaaaagtaagacctccctggat
gcattctattgcagaccctacgtggagttgactggcacttcatggctgaagatctgggtc
ctaccacccggaaagcgtgaaccttcagctgagatcacagctgaggccaaagggaatttg
gcagtggatattggaggagagaggatgaggattcgttgtgacccaagatcccactacagc
cacaggagctgcattttgtcacagcatcttgagtttactcaggaaaggaggcctgaggga
catggagttgctgctctgagagcctgtgtagccaggtccctctgtgcagcacaggggctg
acttggcagccattaagtctcgggtatgaccattggcagtgtgaaaacggactagtaaac
ctatctctgctttacaccaaatcacaaatcaaagctgacataggcccaggagcccatact
ttatctggaagaaatatccagattatgacattccatgtctacaccaaagggtccctgata
ctaaaatatgggacagaactatccacaagggctgacagcagcaatagctcaggcagaagt
aaaggaaaccacagaaagtctttggctgtgtcttttccttcattcttctatctagactct
ttccaaggaaaaaccatcataccctctaagggcaaagcatcaagtcgtactgagccatta
gacactgacggccaagggtgtggagcccaagaccactccctgcctctgcatgacttcaga
cagcagcacctgcagccattttgcagcactgcacttgggttcttagacccgtttgcctgt
gtgcgcacacatatgcagccagaatcacccattgcagaccttccaaaccagggaatccag
gcctacccagaggacccacagcaggaaacaaaagagctagttacttcctgctacttttct
acacttcaccagggctgcttgagtaacctcatgcccaagccctgtatttacatctctagc
ccaaagacccaagacaatacaaatggctttgctaatcttgcccaggccacacaattggat
gacaagctgctgtttacctggattctggggtccttggggaaggcagccagtgaaattgga
gaggggccacaaggtctttcagagtgtctgagtgaagagggtaaagatggaatggcctta
ggacaagagatcttgaagcttcaggctacctttgaccaaggcagagaaaagtctttcagg
tggtccaagccatttagacttacattgaactaccttgatttatacatgctacgatcatca
gatgcagaaagggcgtttaacagttaa