GENSCAN 1.0	Date run:  5-Nov-116	Time: 05:37:54

Sequence gi568815591r:95485644_95696293 : 210650 bp : 37.90% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +    329    515  187  1  1   82   93   154 0.997  14.57
 1.02 Intr +  10115  10414  300  0  0  129   99   112 0.968  12.18
 1.03 Intr +  15702  15755   54  1  0   75   91    61 0.873   3.13
 1.04 Intr +  18695  18748   54  0  0   75   91    61 0.802   3.13
 1.05 Term +  19265  19341   77  0  2   35   47    93 0.381  -3.08
 1.06 PlyA +  19918  19923    6                               1.05

 2.00 Prom +  19935  19974   40                              -5.65
 2.01 Init +  27491  27530   40  1  1   87  116    64 0.890   9.50
 2.02 Intr +  42170  42660  491  0  2  107  100   729 0.124  67.80
 2.03 Intr +  50794  50907  114  0  0   97   84    97 0.807   9.92
 2.04 Term +  65020  65133  114  0  0   76   33    64 0.045  -2.71
 2.05 PlyA +  65356  65361    6                               1.05

 3.02 PlyA -  65977  65972    6                               1.05
 3.01 Sngl -  66934  66566  369  1  0   97   48   268 0.719  19.08
 3.00 Prom -  72890  72851   40                              -8.35

 4.00 Prom +  75083  75122   40                              -3.35
 4.01 Sngl +  81802  82197  396  0  0   69   35   209 0.735   9.70
 4.02 PlyA +  82307  82312    6                               1.05

 5.12 PlyA -  83867  83862    6                               1.05
 5.11 Term - 100138  99998  141  1  0  113   49   122 0.950   7.75
 5.10 Intr - 101480 101367  114  2  0  101   63   109 0.998   9.42
 5.09 Intr - 101885 101775  111  2  0   95   91    98 0.999  10.46
 5.08 Intr - 102182 102084   99  2  0   77   86   111 0.989   9.19
 5.07 Intr - 103629 103540   90  0  0  102   24    58 0.472   0.07
 5.06 Intr - 104073 103997   77  1  2   78   86    10 0.975  -1.88
 5.05 Intr - 106954 106868   87  2  0   79   95    72 0.983   6.02
 5.04 Intr - 107301 107117  185  2  2   15   98   118 0.729   4.01
 5.03 Intr - 108127 108056   72  0  0  110   63    75 0.710   4.80
 5.02 Intr - 109521 109380  142  1  1   78  119    83 0.992   8.89
 5.01 Init - 110650 110521  130  1  1   90   77   266 0.996  24.06
 5.00 Prom - 112507 112468   40                              -2.25

 6.00 Prom + 118705 118744   40                              -8.05
 6.01 Init + 119697 119887  191  2  2   58   45   173 0.364   6.53
 6.02 Intr + 120288 120441  154  0  1   13   26   113 0.081  -3.25
 6.03 Intr + 127408 127589  182  0  2   36  119   120 0.445   7.64
 6.04 Intr + 152478 152585  108  0  0   79   83    87 0.307   5.78
 6.05 Intr + 155468 155588  121  2  1   97   99    43 0.290   5.88
 6.06 Intr + 185988 186076   89  2  2   76   87    68 0.244   3.35
 6.07 Term + 189786 189864   79  0  1   48   48   108 0.301  -0.94
 6.08 PlyA + 190107 190112    6                               1.05

 7.00 Prom + 192021 192060   40                              -1.25
 7.01 Init + 203959 204057   99  0  0   35   50   119 0.094   3.11
 7.02 Term + 205374 205517  144  2  0   84   48    66 0.092  -0.87
 7.03 PlyA + 207004 207009    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815591r:95485644_95696293|GENSCAN_predicted_peptide_1|223_aa
MDGTTAPVTKSGAAKLVKRNFLEALKSNDFGKLKAILIQRQIDVDTVFEVEDENMVLASY
KQGYWLPSYKLKSSWATGLHLSVLFGHVECLLVLLDHNATINCRPNGKTPLHVACEMANV
DCVKILCDRGAKLNCYSLSGHTALHFCTTPSSILCAKQLVWRVTQVNHMLGNSLVNEVEH
VTQVNHMLGNSLVNEVEHVSQQLLQSRKACSTKNHTTLQETQP

>gi568815591r:95485644_95696293|GENSCAN_predicted_CDS_1|672_bp
atggacggcaccactgcccctgtcactaaatctggagctgccaagttagttaagagaaat
ttccttgaggcgctaaagtccaatgacttcggaaaattgaaggctattttgatccaaagg
caaatagatgtggacactgtttttgaagtcgaagatgagaatatggttttggcatcttat
aaacaaggttactggttgcctagctataaattgaagtcttcctgggccacaggcctccat
ctctctgtcttgtttggccatgtggaatgtcttctggtgctactggaccacaatgctaca
atcaactgtagacccaatgggaaaacccctcttcacgtggcttgtgaaatggccaatgtg
gattgtgttaagatcctctgtgatcgtggggcaaagctcaattgctactccttaagtgga
cacacagctttgcacttttgtacaactccaagttccattctctgtgccaagcaattggtt
tggagagtgacacaagtcaaccacatgttaggaaattccctggtcaatgaagtggaacat
gtgacacaagtcaaccacatgttaggaaattccctggtcaatgaagtggaacatgtcagt
cagcagttactccagtcccgtaaagcatgttccacgaaaaatcataccacacttcaggaa
acacaaccttaa

>gi568815591r:95485644_95696293|GENSCAN_predicted_peptide_2|252_aa
MVTKCGKPLEAGKGANVNMKTNNQDEETPLHTAAHFGLSELVAFYVEHGAIVDSVNAHME
TPLAIAAYWALRFKEQEYSTEHHLVCRMLLDYKAEVNARDDDFKSPLHKAAWNCDHVLMH
MMLEAGAEANLMDINGCAAIQYVLKVTSVRPAAQPEICYQLLLNHGAARIYPPQFHKVIQ
ACHSCPKAIEVVVNAYEHIRWNTKWRRAIPDDDLERLRPWIFEVEPKENSQQLCPFAQEE
SELLLFLISPLL

>gi568815591r:95485644_95696293|GENSCAN_predicted_CDS_2|759_bp
atggtcacgaaatgtgggaagcctctagaagctggaaaaggggcgaatgtgaacatgaag
accaacaaccaagatgaggagacgcccttgcacacggctgcccacttcggcctttcggag
ctggtggccttctacgtggaacacggggccatagtggacagcgtgaatgcccacatggag
acccccctggccatcgccgcctactgggccctccgctttaaggagcaggagtacagcacg
gagcaccacctggtctgccgcatgctgcttgactacaaagccgaagtcaatgcccgagat
gacgactttaaatctcccctccacaaggcagcctggaactgtgaccacgtgctcatgcac
atgatgctggaagctggcgccgaagccaatctcatggatatcaacggctgtgctgccatc
cagtacgtgctgaaggtcacctccgtgcgccctgctgcccagcctgagatctgctaccag
ctcctgttgaaccatggggctgcccgaatataccctccacagttccataaggtgatacag
gcctgccattcttgtcctaaagcaattgaagttgtagtcaatgcctatgaacacatcaga
tggaacacaaagtggagaagagctatccccgatgatgacttggagagactcaggccgtgg
atctttgaggtagaacccaaggaaaatagtcaacaactttgtccatttgcccaggaagag
tctgagttgttgctgttcctcattagtcctctgctttag

>gi568815591r:95485644_95696293|GENSCAN_predicted_peptide_3|122_aa
MPEPLPSMGSCVAGASPTSAVPCSTAPSPIDHPRAEESGHTMQDWQAAPPAAPVWDPLGE
ASWVPDSGGDLQNLCVDTVYLANLVGTWRTVVSSSGIVNAPISALSKQTTWLYQSAGWGG
AR

>gi568815591r:95485644_95696293|GENSCAN_predicted_CDS_3|369_bp
atgcctgagcctctcccttccatgggctcctgtgtggcaggagcctccccgacaagcgcc
gtcccctgctccaccgcgcccagtcccatcgaccacccaagggctgaggagagcgggcac
acgatgcaggactggcaggcagctccacctgcagccccggtgtgggatccactgggtgaa
gccagctgggtacctgactctggtggggacttgcagaacctttgtgtggacactgtttat
ctagctaatctagtggggacgtggagaaccgttgtgtctagctcagggattgtaaacgca
ccaatcagcgccctgtcaaaacagaccacttggctctaccaatcagcaggatggggtggg
gccagataa

>gi568815591r:95485644_95696293|GENSCAN_predicted_peptide_4|131_aa
MLFCKTNKEKKREESNRCNKNDKRDITTDPTEIQTTIREYYKHLYANKLENLEEMDKFLD
TYTLPRLNQEELESLNRPITGSEIVAIINSLPTKRVQDQMDSQPNSTRDTRRNWYHSSET
IPINRKRGNPP

>gi568815591r:95485644_95696293|GENSCAN_predicted_CDS_4|396_bp
atgctgttttgcaagactaataaagaaaaaaagagagaagaatcaaatagatgcaataaa
aatgataaaagggatatcaccactgatcccacagaaatacaaactaccatcagagaatac
tataaacacctctacgcaaataaactagaaaatctagaagaaatggataaattcctcgac
acatacaccctcccaagactaaaccaggaagaacttgaatctctgaatagaccaataaca
ggttctgaaattgtggcaataatcaatagcttaccaacaaaaagagtccaggaccagatg
gattcacagccgaattctaccagagatacaaggaggaactggtaccattcctctgaaact
attccaatcaatagaaaaagagggaatcctccctaa

>gi568815591r:95485644_95696293|GENSCAN_predicted_peptide_5|415_aa
MKAARFVLRSAGSLNGAGLVPREVEHFSRYSPSPLSMKQLLDFGSENACERTSFAFLRQE
LPVRLANILKEIDILPTQLVNTSSVQLVKSWYIQSLMDLVEFHEKSPDDQKALSDFVDTL
IKVRNRHHNVVPTMAQGIIEYKDACTVDPVTNQNLQYFLDRFYMNRISTRMLMNQHILIF
SDSQTGNPSHIGSIDPNCDVVAVVQGKFPDQPIHIVYVPSHLHHMLFELFKAGPTPNSAV
QVQNSCRWYGSIQSPECAKSTNAMRATVEHQENQPSLTPIEVIVVLGKEDLTIKISDRGG
GVPLRIIDRLFSYTYSTAPTPVMDNSRNAPLAGFGYGLPISRLYAKYFQGDLNLYSLSGY
GTDAIIYLKALSSESIEKLPVFNKSAFKHYQMSSEADDWCIPSREPKNLAKEVAM

>gi568815591r:95485644_95696293|GENSCAN_predicted_CDS_5|1248_bp
atgaaggcggcccgcttcgtgctgcgcagcgctggctcgctcaacggcgccggcctggtg
ccccgagaggtggagcatttctcgcgctacagcccgtccccgctgtccatgaagcagcta
ctggactttggttcagaaaatgcatgtgaaagaacttcttttgcatttttgcgacaagaa
ttgcctgtgagactcgccaacattctgaaggaaattgatatcctcccgacccaattagta
aatacctcttcagtgcaattggttaaaagctggtatatacagagcctgatggatttggtg
gaattccatgagaaaagcccagatgaccagaaagcattatcagactttgtagatacactc
atcaaagttcgaaatagacaccataatgtagtccctacaatggcacaaggaatcatagag
tataaagatgcctgtacagttgacccagtcaccaatcaaaatcttcaatatttcttggat
cgattttacatgaaccgtatttctactcggatgctgatgaaccagcacattcttatattt
agtgactcacagacaggaaacccaagccacattggaagcattgatcctaactgtgatgtg
gtagcagtggtccaaggaaaatttccagaccaaccaattcacatcgtgtatgttccttct
cacctccatcatatgctctttgaactatttaaggctggtcctactcctaactcagcagtt
caggtccagaattcctgtaggtggtatggctccattcagagtccagaatgtgctaagagc
acaaatgcaatgcgggcaacagttgaacaccaggaaaatcagccttcccttacaccaata
gaggttattgttgtcttgggaaaagaagaccttaccattaagatttcagacagaggaggt
ggtgttcccctgagaattattgaccgcctctttagttatacatactccactgcaccaacg
cctgtgatggataattcccggaatgctcctttggctggttttggttacggcttgccaatt
tctcgtctgtatgcaaagtactttcaaggagatctgaatctctactctttatcaggatat
ggaacagatgctatcatctacttaaaggctttgtcttctgagtctatagaaaaacttcca
gtttttaacaagtcagccttcaaacattatcagatgagctctgaggctgatgactggtgt
atcccaagcagggaaccaaagaacctggcaaaagaagtggccatgtga

>gi568815591r:95485644_95696293|GENSCAN_predicted_peptide_6|307_aa
MGAPLWAGRGRSQLPLLAGRCGGRGTGGNRGCTQLSWASMSSEWTWARWAPHSEQPARAA
SPGQFVNAPISVLCLANLVGTWRTSVSSSEIVNAPISTLSKRTNQLSVKWINQQDALLDE
ISKKACQEPSLLLMGQEKALTCAHQHPITEPTPPSGRQSPAGLPPIPLAALPLLLRLHKC
GSVAGSQGVLQGGSRKTTKVRKREKSGEAHMSPRLSNAPSPYQQVFLRHCTPGRLRAPER
FFLTGENGYLSLERNGKSEDVFRSHKPEVKAESERLLFPAISNVCFDQTLTDRPTLETAF
CENGNDH

>gi568815591r:95485644_95696293|GENSCAN_predicted_CDS_6|924_bp
atgggagcccctctctgggctggccgaggtcggagccagctccctctgcttgcagggagg
tgtggagggagaggcacaggcgggaaccggggctgcacgcaactctcatgggccagcatg
agttctgagtggacgtgggcacggtgggccccgcactcggagcagccggctcgtgctgcc
agccccgggcagtttgtaaatgcaccaatcagtgttctgtgtctagctaatctagtgggg
acttggagaacttctgtgtctagctcagagattgtaaatgcaccaatcagcaccctgtca
aaacggaccaatcagctctctgtaaaatggatcaatcagcaggatgcactccttgatgaa
ataagtaagaaagcttgtcaagagccatcactcttgctcatgggacaagagaaggcactg
acctgtgcccaccagcaccccatcactgagccaacaccaccttcaggaagacagtctcca
gcagggcttcccccaattcccctagctgctttgcctctgctactccggttacacaagtgt
ggaagtgtggcagggtctcaaggggtccttcaaggtggtagcagaaaaactaccaaagtc
agaaagcgagagaaaagtggtgaagctcacatgagcccaaggttaagcaatgctccatcc
ccttaccagcaggtgttcctaagacattgtaccccaggtcggctaagagctcctgaacgt
ttctttctcacaggagaaaatggttacctcagcctggaaaggaatggaaaatcagaagac
gtgtttagatcacacaaaccagaggtgaaagctgaatctgagaggcttctgtttccagca
ataagcaatgtctgctttgatcagactctcactgaccgtccaacactggaaactgcattt
tgtgaaaatggtaatgatcattaa

>gi568815591r:95485644_95696293|GENSCAN_predicted_peptide_7|80_aa
MAARSTSWYKPCEGQFENARKHDKYMYPQMHDKLCGFRQKPHNMTELRGYTYKMRAIKLT
LKDCCLLTFEGSFLARETLT

>gi568815591r:95485644_95696293|GENSCAN_predicted_CDS_7|243_bp
atggctgccaggagcacaagctggtacaagccctgtgaagggcaatttgaaaatgcccgt
aaacatgacaaatacatgtatcctcagatgcacgacaaactttgtggatttaggcaaaaa
ccacataacatgactgagcttagaggctacacctataaaatgagggcaataaaactcacc
ttaaaggactgttgtctcttaacttttgaagggagtttcttagccagagaaaccctaacc
tga