GENSCAN 1.0	Date run:  5-Nov-116	Time: 05:31:48

Sequence gi568815597f:21978479_22190029 : 211551 bp : 48.72% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   2346   2443   98  2  2   66   80   151 0.989  10.91
 1.02 Intr +   2560   2694  135  1  0   93   92   196 0.979  20.18
 1.03 Intr +   5216   5352  137  2  2   98   54   145 0.977  12.31
 1.04 Intr +   5711   5853  143  0  2  104   82   169 0.530  17.97
 1.05 Intr +   8053   8205  153  0  0   87   78   187 0.913  17.87
 1.06 Term +  20477  20581  105  1  0   88   48    31 0.009  -2.49
 1.07 PlyA +  21169  21174    6                               1.05

 2.00 Prom +  21811  21850   40                              -5.06
 2.01 Init +  23200  23239   40  0  1   60   91    88 0.647   4.99
 2.02 Intr +  24525  24610   86  1  2  121  110    34 0.987   8.44
 2.03 Intr +  26969  27066   98  1  2   66   80   154 0.991  11.21
 2.04 Intr +  27184  27318  135  1  0  102   92   156 0.979  17.08
 2.05 Intr +  28400  28536  137  2  2   98   54   137 0.999  11.51
 2.06 Intr +  28895  29037  143  0  2  127   92   159 0.941  20.27
 2.07 Intr +  31227  31379  153  2  0   92   78   238 0.912  23.47
 2.08 Intr +  46814  46894   81  1  0   95  103    20 0.282   4.03
 2.09 Term +  51958  52077  120  0  0   69   55    66 0.329  -0.13
 2.10 PlyA +  52740  52745    6                               1.05

 3.00 Prom +  67791  67830   40                              -4.66
 3.01 Init +  74023  74194  172  0  1   86   96   117 0.659   9.90
 3.02 Intr +  74216  74264   49  0  1   55  105    69 0.430   3.04
 3.03 Intr +  96520  96613   94  1  1   47   77    33 0.009  -1.93
 3.04 Intr + 103244 103316   73  1  1  115   67    96 0.998   9.18
 3.05 Intr + 107961 108070  110  1  2  113  121     7 0.993   6.50
 3.06 Intr + 108191 108388  198  1  0   29  110   124 0.605   8.25
 3.07 Intr + 112950 113023   74  2  2  104   89    94 0.782   9.30
 3.08 Intr + 134839 134974  136  1  1   60   69    78 0.263   3.67
 3.09 Intr + 135931 136102  172  0  1   33  105    65 0.332   2.22
 3.10 Term + 136759 136838   80  2  2   99   44    18 0.173  -3.57
 3.11 PlyA + 137551 137556    6                               1.05

 4.08 PlyA - 140552 140547    6                               1.05
 4.07 Term - 142039 141572  468  1  0  125   47   721 0.998  66.67
 4.06 Intr - 142875 142733  143  1  2   45   67   180 0.842  11.67
 4.05 Intr - 143098 142967  132  2  0  142   73   126 0.929  17.12
 4.04 Intr - 151373 151138  236  1  2   91  100   496 0.996  48.43
 4.03 Intr - 152625 152555   71  0  2   12   84    60 0.299  -4.02
 4.02 Intr - 157919 157793  127  1  1  107  100    47 0.712   8.48
 4.01 Init - 164444 164368   77  2  2   99   87   141 0.921  13.98
 4.00 Prom - 177542 177503   40                              -5.46

 5.06 PlyA - 178485 178480    6                               1.05
 5.05 Term - 180672 180375  298  2  1   71   52   139 0.255   3.34
 5.04 Intr - 184855 184728  128  1  2   73   15   131 0.481   3.78
 5.03 Intr - 198063 197984   80  1  2   98   46    42 0.222   0.27
 5.02 Intr - 207290 207237   54  0  0   85   82    65 0.412   4.55
 5.01 Init - 211126 210649  478  1  1   93   86   200 0.736  15.90

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term -  90390  90260  131  1  2   36   42   149 0.931   3.44
S.002 Init -  91458  91392   67  0  1   63   82    55 0.919   1.73
S.003 Init + 100001 100105  105  1  0   69   93    39 0.964   2.72


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597f:21978479_22190029|GENSCAN_predicted_peptide_1|256_aa
VSLQYEKSGSFYHTCGGSLIAPDWVVTAGHCISSSRTYQVVLGEYDRAVKEGPEQVIPIN
SGDLFVHPLWNRSCVACGNDIALIKLSRSAQLGDAVQLASLPPAGDILPNETPCYITGWG
RLYTNGPLPDKLQEALLPVVDYEHCSRWNWWGSSVKKTMVCAGGDIRSGCNGDSGGPLNC
PTEDGGWQVHGVTSFVSAFGCNTRRKPTVFTRVSAFIDWIEEVLEGGSSSGISLKLLLGQ
KTLGELISRATASVSP

>gi568815597f:21978479_22190029|GENSCAN_predicted_CDS_1|771_bp
gtttccctgcagtatgagaaaagcggaagcttctaccacacctgtggcggtagcctcatc
gcccccgactgggttgtgactgccggccactgcatctcgagctcccggacctaccaggtg
gtgttgggcgagtacgaccgtgctgtgaaggagggccccgagcaggtgatccccatcaac
tctggggacctctttgtgcatccactctggaaccgctcgtgtgtggcctgtggcaatgac
atcgccctcatcaagctctcacgcagcgcccagctgggagacgccgtccagctcgcctca
ctccctccggctggtgacatccttcccaacgagacaccctgctacatcaccggctggggc
cgtctctataccaacgggccactcccagacaagctgcaggaggccctgctgccggtggtg
gactatgaacactgctccaggtggaactggtggggttcctccgtgaagaagaccatggtg
tgtgctggaggggacatccgctccggctgcaatggtgactctggaggacccctcaactgc
cccacagaggatggtggctggcaggtccatggcgtgaccagctttgtttctgcctttggc
tgcaacacccgcaggaagcccacggtgttcactcgagtctccgccttcattgactggatt
gaggaggtgttggaaggaggttcatcttcagggatttcactcaagctactcctaggccag
aaaaccctcggagagttaatcagccgtgcaactgccagtgtcagtccataa

>gi568815597f:21978479_22190029|GENSCAN_predicted_peptide_2|330_aa
MLRLLSSLLLVAVASGYGPPSSHSSSRVVHGEDAVPYSWPWQVSLQYEKSGSFYHTCGGS
LIAPDWVVTAGHCISRDLTYQVVLGEYNLAVKEGPEQVIPINSEELFVHPLWNRSCVACG
NDIALIKLSRSAQLGDAVQLASLPPAGDILPNKTPCYITGWGRLYTNGPLPDKLQQARLP
VVDYKHCSRWNWWGSTVKKTMVCAGGYIRSGCNGDSGGPLNCPTEDGGWQVHGVTSFVSA
FGCNFIWKPTVFTRVSAFIDWIEELGKLRLRKIKNFSGAKKLLRMYPKLRTVQIPREPSG
LPPETLSEDSVEDFKTMLESLPAEVQEVLL

>gi568815597f:21978479_22190029|GENSCAN_predicted_CDS_2|993_bp
atgctccggctgctcagttccctcctccttgtggccgttgcctcaggctatggcccacct
tcctctcactcttccagccgcgttgtccatggtgaggatgcggtcccctacagctggccc
tggcaggtttccctgcagtatgagaaaagtggaagcttctaccacacgtgtggcggtagc
ctcatcgcccccgattgggttgtgactgccggccactgcatctcgagggatctgacctac
caggtggtgttgggtgagtacaaccttgctgtgaaggagggccccgagcaggtgatcccc
atcaactctgaggagctgtttgtgcatccactctggaaccgctcgtgtgtggcctgtggc
aatgacatcgccctcatcaagctctcacgcagcgcccagctgggagatgccgtccagctc
gcctcactccctcccgctggtgacatccttcccaacaagacaccctgctacatcaccggc
tggggccgtctctataccaatgggccactcccagacaagctgcagcaggcccggctgccc
gtggtggactataagcactgctccaggtggaactggtggggttccaccgtgaagaaaacc
atggtgtgtgctggagggtacatccgctccggctgcaacggtgactctggaggacccctc
aactgccccacagaggatggtggctggcaggtccacggtgtgaccagctttgtttctgcc
tttggctgcaacttcatctggaagcccacggtgttcactcgagtctccgccttcatcgac
tggattgaggagttgggcaaactgcggctcagaaagataaagaacttctccggagcgaaa
aagctgctaagaatgtatccaaaactccgcacggtccagattccacgagagccttctggg
ctcccaccagagaccctcagtgaagactctgttgaagactttaagaccatgctagaaagc
ctcccggcagaggttcaggaagttctgctatga

>gi568815597f:21978479_22190029|GENSCAN_predicted_peptide_3|385_aa
MQSIAPNSRAAPARACATGGRSQGSPGTALTRPSLFPFPVPPTSAGTQLCVSCALTSAEE
TPRSAANAPVEKLRVKAEGTSLSFQLKIESGLFGKLAVISPVSQKVFDNYAVTVMIGGEP
YTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPF
LLVGTQIDLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFD
EAILAALEPPEPKKSRREAMSVAFSSRSFKEATVPDVATKSIVDPYIWQEACEDLRKKGS
PWAWEQWLPFWGSQGTWPECALSGTVSSSAGPGPPLNLEKALGYWCCSWRTTEPLSKQGD
FPWTGCSQEEAEKEVYFVTAFSRLS

>gi568815597f:21978479_22190029|GENSCAN_predicted_CDS_3|1158_bp
atgcagagcatagccccgaactcacgagctgcgccggcccgcgcgtgcgcgacaggcggg
cggagccagggcagtccaggcaccgccttgacccgccccagcctcttccccttccctgtt
cctcccacttccgcgggcacccaactgtgcgtctcctgcgcgctgacgtcagccgaggag
accccgcgcagtgctgccaacgccccggtggagaagctgagggttaaagcagagggaact
tcattatcattccaattgaagattgaaagtggcctgtttggtaaactggctgtcatctct
cctgtttctcagaaggtttttgacaactatgcagtcacagttatgattggtggagaacca
tatactcttggactttttgatactgcagggcaagaggattatgacagattacgaccgctg
agttatccacaaacagatgtatttctagtctgtttttcagtggtctctccatcttcattt
gaaaacgtgaaagaaaagtgggtgcctgagataactcaccactgtccaaagactcctttc
ttgcttgttgggactcaaattgatctcagagatgacccctctactattgagaaacttgcc
aagaacaaacagaagcctatcactccagagactgctgaaaagctggcccgtgacctgaag
gctgtcaagtatgtggagtgttctgcacttacacagaaaggcctaaagaatgtatttgac
gaagcaatattggctgccctggagcctccagaaccgaagaagagccgcagggaggccatg
tctgttgctttctcaagtagaagcttcaaggaggcaactgttcctgatgtcgctacaaag
tccattgttgacccttatatctggcaggaggcctgtgaggacttaagaaaaaaagggagt
ccttgggcttgggaacagtggctgcctttttggggcagccagggcacctggccagagtgt
gctctgtcgggcactgtcagctcttcagcaggccccggtcctcctcttaacctagagaag
gccctgggttattggtgttgttcttggcggaccaccgagcccctcagcaaacagggagac
ttcccatggactggttgttctcaggaagaggctgagaaggaggtctactttgtcactgca
ttttcacggctctcctag

>gi568815597f:21978479_22190029|GENSCAN_predicted_peptide_4|417_aa
MSPRSCLRSLRLLVFAVFSAAASNWLFPQPSREDSSMGQWPQDMKGCGDTGRMGLAKEEL
SAGKLGDKAVKPGKCQVQVLLNLTGCVALHMRYLAKLSSVGSISEEETCEKLKGLIQRQV
QMCKRNLEVMDSVRRGAQLAIEECQYQFRNRRWNCSTLDSLPVFGKVVTQGTREAAFVYA
ISSAGVAFAVTRACSSGELEKCGCDRTVHGVSPQGFQWSGCSDNIAYGVAFSQSFVDVRE
RSKGASSSRALMNLHNNEAGRKAILTHMRVECKCHGVSGSCEVKTCWRAVPPFRQVGHAL
KEKFDGATEVEPRRVGSSRALVPRNAQFKPHTDEDLVYLEPSPDFCEQDMRSGVLGTRGR
TCNKTSKAIDGCELLCCGRGFHTAQVELAERCSCKFHWCCFVKCRQCQRLVELHTCR

>gi568815597f:21978479_22190029|GENSCAN_predicted_CDS_4|1254_bp
atgagtccccgctcgtgcctgcgttcgctgcgcctcctcgtcttcgccgtcttctcagcc
gccgcgagcaactggctgttccctcagcccagcagggaggacagttcaatgggtcagtgg
ccacaggacatgaaaggttgtggggacacaggtcggatgggtctagcaaaggaagagctc
tctgctggcaaattgggggacaaggctgtgaagccaggcaaatgccaggttcaagtcctg
ctcaacctcactggctgtgtagccctgcacatgaggtacctggccaagctgtcgtcggtg
gggagcatctcagaggaggagacgtgcgagaaactcaagggcctgatccagaggcaggtg
cagatgtgcaagcggaacctggaagtcatggactcggtgcgccgcggtgcccagctggcc
attgaggagtgccagtaccagttccggaaccggcgctggaactgctccacactcgactcc
ttgcccgtcttcggcaaggtggtgacgcaagggactcgggaggcggccttcgtgtacgcc
atctcttcggcaggtgtggcctttgcagtgacgcgggcgtgcagcagtggggagctggag
aagtgcggctgtgacaggacagtgcatggggtcagcccacagggcttccagtggtcagga
tgctctgacaacatcgcctacggtgtggccttctcacagtcgtttgtggatgtgcgggag
agaagcaagggggcctcgtccagcagagccctcatgaacctccacaacaatgaggccggc
aggaaggccatcctgacacacatgcgggtggaatgcaagtgccacggggtgtcaggctcc
tgtgaggtaaagacgtgctggcgagccgtgccgcccttccgccaggtgggtcacgcactg
aaggagaagtttgatggtgccactgaggtggagccacgccgcgtgggctcctccagggca
ctggtgccacgcaacgcacagttcaagccgcacacagatgaggacctggtgtacttggag
cctagccccgacttctgtgagcaggacatgcgcagcggcgtgctgggcacgaggggccgc
acatgcaacaagacgtccaaggccatcgacggctgtgagctgctgtgctgtggccgcggc
ttccacacggcgcaggtggagctggctgaacgctgcagctgcaaattccactggtgctgc
ttcgtcaagtgccggcagtgccagcggctcgtggagttgcacacgtgccgatga

>gi568815597f:21978479_22190029|GENSCAN_predicted_peptide_5|345_aa
MATSKMAQVAQSLNSHIRGPPECQGPCWILEHHAAPELIPEVLNQLGLSGRTQVSELEAG
TTAQLALVIRKLQSEVEHFWYSNYSPAKLSSASSWDPASKSSVQRTPWQAPAERPALKEE
AKVLCHDPTFKEVLCPPHPSWLLPQDNGSKITPTKAPGQGEVNSVQEVKRIAKNLTTGPA
KVPLSSCQHLLLTSQGHVLHFARELLDVTHDAVTRQREDDSCSHPGGCSDNETSAVPAWD
STLTDRGELNQVTPEQISACTLASIAAKATPQGSPTMGARRAFAKAAQTVSLDLHWCWGS
DQHRDLSTVRAGKSMGVGAGRDLGRNLHFILNSLCDLDQSVPQLL

>gi568815597f:21978479_22190029|GENSCAN_predicted_CDS_5|1038_bp
atggccacctccaagatggcacaggtagctcaatctctcaatagccatatacgagggcct
cctgagtgtcagggcccatgctggatactggagcaccacgctgcaccagaactcatccca
gaagtgctcaaccagttgggactcagtggaagaacccaggtctctgagttggaagctggg
accacagcccagctggccctggtgatacggaagctgcagtccgaggtcgagcatttttgg
tattccaattactctccagccaagctcagctctgcaagctcatgggacccagccagcaaa
tcctctgtgcaacgcacaccttggcaagcacctgccgagcgcccagcactcaaggaagaa
gccaaggtgctgtgccatgatcccacctttaaggaagtcctctgtcctccacatccctcc
tggctccttccccaagacaatggaagcaagataacacccacgaaagccccaggccaaggt
gaggtgaatagtgttcaagaggtaaagcggattgccaaaaacctcaccactgggcctgcc
aaagtcccactctccagctgccagcacctgctcctcacctcacagggccacgtccttcac
tttgctcgggagttactggacgttactcatgacgcagtgacgcggcagcgtgaggatgac
agctgtagccaccccgggggctgctctgacaatgaaactagcgcagtgccggcatgggac
tcaacactgactgaccgaggggagctcaaccaagtcaccccagagcagatttcagcctgc
actctggccagcatagccgccaaagccacgccccagggctcccctactatgggagcaagg
agagcctttgccaaagctgctcagactgtctcactggacctccactggtgctggggaagt
gaccagcacagagacctgagcactgtccgtgcaggaaagagcatgggagttggggcaggc
agggacctaggccggaatctgcacttcatccttaattcactctgtgacctcgaccagtca
gtccctcagcttctctga