GENSCAN 1.0	Date run:  5-Nov-116	Time: 05:30:35

Sequence gi568815588r:102576897_102805490 : 228594 bp : 48.56% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +  15686  15828  143  0  2   92   94   108 0.969  11.87
 1.02 Intr +  16740  16825   86  2  2   40   73   139 0.997   6.22
 1.03 Intr +  17097  17169   73  0  1  118   55    35 0.907   2.61
 1.04 Intr +  20244  20397  154  2  1   44   81   278 0.855  22.35
 1.05 Intr +  22537  22648  112  2  1   46  105   138 0.936  10.74
 1.06 Intr +  38372  38506  135  2  0   85  105   189 0.995  19.98
 1.07 Intr +  40394  40532  139  2  1   97   52    98 0.940   7.57
 1.08 Intr +  41891  41978   88  1  1   64   94     7 0.395  -1.56
 1.09 Intr +  49080  49181  102  1  0   97   80    18 0.696   2.05
 1.10 Intr +  50279  50347   69  0  0  112   74    15 0.701   1.65
 1.11 Intr +  50586  50761  176  1  2   93   56    93 0.907   6.26
 1.12 Term +  53170  53259   90  0  0   92   38   120 0.886   5.12
 1.13 PlyA +  53349  53354    6                               1.05

 2.00 Prom +  55909  55948   40                              -0.06
 2.01 Init +  56838  56937  100  2  1   81   94    39 0.210   2.26
 2.02 Intr +  67063  67247  185  2  2   79   64    -9 0.140  -4.69
 2.03 Intr +  67500  68295  796  2  1   48   19  1295 0.714 109.64
 2.04 Intr +  72271  72382  112  2  1  -15   58   122 0.042  -1.66
 2.05 Intr +  73969  74044   76  1  1  112   68   -25 0.066  -2.58
 2.06 Intr +  77757  77909  153  2  0   80   92   234 0.227  23.27
 2.07 Intr +  78184  78417  234  0  0  106   86   555 0.999  54.99
 2.08 Intr +  79210  79241   32  0  2  136  115    48 0.999   9.23
 2.09 Intr +  79374  79489  116  0  2   77  100   195 0.974  19.69
 2.10 Term +  79851  80458  608  1  2   79   42   533 0.999  42.48
 2.11 PlyA +  81183  81188    6                               1.05

 3.14 PlyA -  81359  81354    6                               1.05
 3.13 Term -  88611  88543   69  0  0  135   50    12 0.245   0.04
 3.12 Intr -  91938  91913   26  1  2   72   96    30 0.217  -0.06
 3.11 Intr -  93148  93076   73  1  1  111   34    44 0.106   0.28
 3.10 Intr -  99300  99245   56  1  2   75   73    39 0.150  -0.20
 3.09 Intr - 100702 100545  158  0  2   75   70    61 0.797   2.65
 3.08 Intr - 101330 101184  147  1  0   87   66    72 0.887   4.25
 3.07 Intr - 102710 102637   74  2  2   88  107    34 0.816   3.50
 3.06 Intr - 109105 108920  186  1  0   73   94   162 0.954  15.19
 3.05 Intr - 113047 112997   51  1  0  130   99    13 0.979   5.70
 3.04 Intr - 122593 122477  117  1  0  114   89    54 0.977   8.76
 3.03 Intr - 128593 128450  144  1  0   45   99   129 0.942  10.18
 3.02 Intr - 137606 137432  175  1  1   46   57    85 0.230   1.14
 3.01 Init - 145150 145101   50  1  2   61   75    71 0.290   3.52
 3.00 Prom - 147139 147100   40                              -8.56

 4.00 Prom + 148148 148187   40                              -5.66
 4.01 Init + 149741 149901  161  1  2   93   94   154 0.196  15.81
 4.02 Intr + 150091 150261  171  1  0   75   75   285 0.991  24.96
 4.03 Intr + 151535 151633   99  2  0  100   91   123 0.992  13.03
 4.04 Intr + 152423 152498   76  2  1  107   86    89 0.999  10.12
 4.05 Intr + 152827 152912   86  0  2  108   73   100 0.980   9.12
 4.06 Intr + 154827 154887   61  0  1   61   88    50 0.955   1.04
 4.07 Intr + 155256 155322   67  2  1  101   43    45 0.829  -0.22
 4.08 Intr + 155963 156012   50  0  2  113   91    33 0.884   4.50
 4.09 Term + 158966 159151  186  1  0  118   43    67 0.808   2.69
 4.10 PlyA + 160259 160264    6                               1.05

 5.00 Prom + 160441 160480   40                              -4.36
 5.01 Init + 167185 167247   63  0  0   86  110   123 0.578  13.46
 5.02 Intr + 186745 186878  134  0  2   50  106    25 0.067  -0.06
 5.03 Intr + 188697 188793   97  0  1   11   97    77 0.131   0.91
 5.04 Term + 196348 196371   24  0  0  106   40    28 0.086  -1.98
 5.05 PlyA + 196828 196833    6                               1.05

 6.05 PlyA - 197032 197027    6                               1.05
 6.04 Term - 205856 205824   33  2  0  115   43    32 0.518  -1.01
 6.03 Intr - 209042 208907  136  1  1   53   89    75 0.617   4.67
 6.02 Intr - 218537 218439   99  1  0  124   57    65 0.649   6.23
 6.01 Init - 226036 226023   14  1  2   59  115    22 0.684   1.59

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init +  14871  14886   16  2  1   77   85     8 0.883  -0.39
S.002 Intr + 149716 149901  186  1  0  120   94   150 0.803  17.60


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815588r:102576897_102805490|GENSCAN_predicted_peptide_1|455_aa
XNTFCSGDHVSWHSPLDNSESRIQHMLLTEDPQMQPVQTPFGVVTFLQIVGVCTEELHSA
QQWNGQGILELLRTVPIAGGPWLITDMRRGETIFEIDPHLQERVDKGIETDGSNLSGVSA
KCAWDDLSRPPEDDEDSRSICIGTQPRRLSGKDTEQIRETLRRGLEINSKPVLPPINPQR
QNGLAHDRAPSRKDSLESDSSTAIIPHELIRTRQLESVHLKFNQESGALIPLCLRGRLLH
GRHFTYKSITGDMAITFVSTGVEGAFATEEHPYAAHGPWLQPCPGLLRLPLWRTGREQAC
LLGGAAEEAGGRVSPQRSPSPGSSPHYLSSFVPYLGAQGVREKTDSVDRRVCRENVGGFR
RFDFSRGTLVRTPSKSSELPAPESLIEEEARAFRLVRVLPSPCCSLADSEQNAHVCCQRT
FRWGVLFKLPKEYSWPEKKLKVSILPDVVFDSPLH

>gi568815588r:102576897_102805490|GENSCAN_predicted_CDS_1|1368_bp
nagaacaccttctgcagtggggaccatgtgtcctggcacagccctttggataacagtgag
tcaagaattcagcacatgctgctgacagaggacccacagatgcagcccgtgcagacaccc
tttggggtagttaccttcctccagatcgttggtgtctgcactgaagagctacactcagcc
cagcagtggaacgggcagggcatcctggagctgctgcggacagtgcctattgctggcggc
ccctggctgataactgacatgcggaggggagagaccatatttgagatcgatccacacctg
caagagagagttgacaaaggcatcgagacagatggctccaacctgagtggtgtcagtgcc
aagtgtgcctgggatgacctgagccggccccccgaggatgacgaggacagccggagcatc
tgcatcggcacacagccccggcgactctctggcaaagacacagagcagatccgggagacc
ctgaggagaggactcgagatcaacagcaaacctgtccttccaccaatcaaccctcagcgg
cagaatggcctcgcccacgaccgggccccgagccgcaaagacagcctggaaagtgacagc
tccacggccatcattccccatgagctgattcgcacgcggcagcttgagagcgtacatctg
aaattcaaccaggagtccggagccctcattcctctctgcctaaggggcaggctcctgcat
ggacggcactttacatataaaagtatcacaggtgacatggccatcacgtttgtctccacg
ggagtggaaggcgcctttgccactgaggagcatccttacgcggctcatggaccctggtta
caaccatgtcccgggctgctgcgtctgcccctgtggagaacagggagggagcaggcctgt
ctcctgggcggagctgctgaggaggctggagggagggtttcccctcagaggagcccctca
cctggatcttcaccccattatctttcttcctttgtgccctacctgggtgctcaaggtgta
cgggagaagacagattctgttgaccgaagagtttgtagagaaaatgttggaggatttaga
agatttgacttctccagaggaacccttgtaaggacacccagcaaatcgtctgaattgcca
gctcctgagagcctcattgaagaggaagccagggccttcaggctagtacgagttctcccc
agcccctgctgttccctggcagattctgaacagaacgcccatgtctgttgccagagaaca
ttccgctggggagttctgttcaaacttcccaaagagtacagctggcctgaaaagaagctg
aaggtctccatcctgcctgacgtggtgttcgacagtccgctacactag

>gi568815588r:102576897_102805490|GENSCAN_predicted_peptide_2|803_aa
MRRWEKTLSLPLHPSSILLSPKTPFALGRGAQTAPRSRPARAPQPAPGQPAGGRLHRGPG
TAGLPLPPRPDLAALGAAALASWPRRPRAPAPAREALGRRRRRSPLRARREDRGSLLRGA
GTRKALLTERPSGPAGAGARGSVGLQRLRTDPRGWGVGEACPGPLPAAAMAENWKNCFEE
ELICPICLHVFVEPVQLPCKHNFCRGCIGEAWAKDSGLVRCPECNQAYNQKPGLEKNLKL
TNIVEKFNALHVEKPPAALHCVFCRRGPPLPAQKVCLRCEAPCCQSHVQTHLQQPSTARG
HLLVEADDVRAWSCPQHNAYRLYHCEAEQVAVCQYCCYYSGAHQGHSVCDVEIRRNEIRA
IAQPCLPAGLAERLRVEVECAFLTVGSTTVLLCECPLSIFQCLGNLICSFGELGWGREGD
GRQKMLMKQQDRLEEREQDIEDQLYKLESDKRLVEVAKPKAMLRGGGGLSAGLWEKVNQL
KEEVRLQYEKLHQLLDEDLRQTVEVLDKAQAKFCSENAAQALHLGERMQEAKKLLGSLQL
LFDKTEDVSFMKNTKSVKILMDRTQTCTSSSLSPTKIGHLNSKLFLNEVAKKEKQLRKML
EGPFSTPVPFLQSVPLYPCGVSSSGAEKRKHSTAFPEASFLETSSGPVGGQYGAAGTASG
EGQSGQPLGPCSSTQHLVALPGGAQPVHSSPVFPPSQYPNGSAAQQPMLPQYGGRKILVC
SVDNCYCSSVANHGGHQPYPRSGHFPWTVPSQEYSHPLPPTPSVPQSLPSLAVRDWLDAS
QQPGHQDFYRVYGQPSTKHYVTS

>gi568815588r:102576897_102805490|GENSCAN_predicted_CDS_2|2412_bp
atgaggcggtgggaaaagaccctctccctgccactacatccctcttctatcctcctctca
ccaaaaaccccttttgccttaggaagaggggcccagacagcgccccggagtcggcccgcc
cgcgccccgcagcccgcgcccggccagccagccgggggacgcctgcaccgtggcccgggg
accgccggcctgcccctcccgccccgtccggatctagcagccctcggcgcggccgccctc
gcctcctggccccgcagaccccgggctccggcccctgcgagggaggcgctcgggaggagg
aggagacgcagcccgctgcgcgcgcggcgtgaggaccgcggctccctcctccggggggcg
ggcacgcggaaggcgctgctgactgagcgaccgtcggggccggctggggccggagctcgg
ggctcggtgggcctacagcggctccggacggacccccggggctggggagtcggggaggcc
tgccccggccccctgcccgcggccgccatggcggagaattggaagaactgcttcgaggag
gagctcatctgccctatctgcctgcacgttttcgtggagccagtgcagctgccgtgcaaa
cacaacttctgccggggctgcatcggcgaggcgtgggccaaggacagcggcctcgtacgc
tgcccagagtgcaaccaggcctacaaccagaagccgggcctggagaagaacctgaagctc
accaacatcgtggagaagttcaatgccctgcacgtggagaagccgccggcggcgctgcac
tgcgtgttctgccgccgcggccccccgctgcccgcgcagaaggtctgcctgcgctgcgag
gcgccctgctgccagtcccacgtgcagacgcacctgcagcagccctccaccgcccgcggg
cacctcctggtggaggcggacgacgtgcgggcctggagctgcccgcagcacaacgcctac
cgcctctaccactgcgaggccgagcaggtggccgtgtgccagtactgctgctactacagc
ggcgcgcatcagggacactcggtgtgcgacgtggagatccgaaggaatgaaatccgggca
attgcgcagccgtgtctgcctgccgggcttgctgagcgcctgcgagttgaagttgagtgt
gccttcctgacagttggcagcactactgtgctgctgtgtgagtgcccgctcagcattttc
cagtgtcttggcaacctgatttgctcattcggtgaactggggtggggtcgtgaaggggac
ggcaggcagaagatgctcatgaagcagcaggaccggctggaggagcgagagcaggacatt
gaggaccagctgtacaaactcgagtcagacaagcgcctggtggaggtagctaagcccaag
gccatgctgcggggtgggggtggcttgagcgcagggctttgggagaaagtgaaccaactg
aaggaggaagttcggctgcagtacgagaagctgcaccagctgctggacgaggacctgcgg
cagacagtggaggtcctagacaaggcccaggccaagttctgcagcgagaacgcagcgcag
gcgctgcacctcggggagcgcatgcaggaggccaagaagctgctgggctccctgcagctg
ctctttgataagacggaggatgtcagcttcatgaagaacaccaagtctgtgaaaatcctg
atggacaggacccagacctgcacgagcagcagcctttcccccactaagatcggccacctg
aactccaagctcttcctgaacgaagtggccaagaaggagaagcagctgcggaaaatgcta
gaaggccccttcagcacgccggtgcccttcctgcagagtgtccccctgtacccttgcggc
gtgagcagctctggggcggaaaagcgcaagcactcaacggccttcccagaggccagtttc
ctagagacgtcgtcgggccctgtgggcggccagtacggggcggcgggcacagccagcggt
gagggccagtctgggcagcccctggggccctgcagctccacgcagcacttggtggccctg
ccgggcggcgcccaaccagtgcactcaagccccgtgttccccccatcgcagtatcccaat
ggctccgccgcccagcagcccatgctcccccagtatggcggccgcaagattctcgtctgt
tctgtggacaactgttactgttcttccgtggccaaccatggcggccaccagccctacccc
cgctccggccactttccctggacagtgccctcgcaggagtactcacacccgctcccgccc
acaccctccgtcccccagtcccttcccagcctggcggtcagagactggcttgacgcctcc
cagcagcccggccaccaggatttctacagggtgtatgggcagccgtccaccaaacactac
gtgacgagctaa

>gi568815588r:102576897_102805490|GENSCAN_predicted_peptide_3|441_aa
MQGDQLDENPSNPGKKRRAGGGLCSSRSPPTAWAGALAHLRTLGKAELHPAPYCCSAPQL
CVRGTSGAAPQQLPLGLLSILRKLKSAPDQEVRILLLGLDNAGKTTLLKQLASEDISHIT
PTQGFNIKSVQSQGFKLNVWDIGGQRKIRPYWKNYFENTDILIYVIDSADRKRFEETGQE
LAELLEEEKLSCVPVLIFANKQDLLTAAPASEIAEGLNLHTIRDRVWQIQSCSALTGEGV
QGASQLLFKLGAEPFTRQVPTSVENWCCPPSGFRRHRPHLGKGQMSALGQPSDYLVLLPK
CTDSNWQSCNHCKFSLLREGAFKVIVPLREPSPQSLWMLVLKAIRSGPDPFKPIWSAAGR
EVNAHRPASHTEKQILMTFDCNDIWNDPEDPALGSQSQLLLWMPPVEGAGAAAIPYARRV
DQKFIPPLHPVLGTPLPAFYF

>gi568815588r:102576897_102805490|GENSCAN_predicted_CDS_3|1326_bp
atgcagggagaccagctggacgagaaccccagtaatccaggcaagaagaggcgagccggc
ggcggcctctgcagctcccgtagcccgcccactgcgtgggcgggcgccttagcgcacttg
cgcactctggggaaagcggagctgcaccccgccccgtattgctgctcagctcctcagctg
tgcgtgcgagggacgtcgggggcggcgccgcagcagttgcccctgggcttgctctcaatt
ttgcgcaagttgaaaagtgcaccagaccaggaggtgagaatacttctcctgggcttggat
aatgctggcaagaccactcttctgaagcagcttgcatctgaagacatcagccacatcaca
cctacacagggtttcaacatcaaaagtgtacaatcacaaggttttaaactgaatgtatgg
gacattggtggacagaggaaaatcagaccatactggaagaattattttgaaaataccgat
attcttatatatgtaatcgacagtgcagacagaaaaagatttgaagagacgggtcaggaa
ctagcggaattactggaggaagaaaaactaagttgtgtgccagtgctcatctttgctaat
aagcaggatttgctcacagcagcccctgcctctgaaattgcagaaggactgaacctgcat
accatccgcgaccgagtctggcagatccagtcttgctcagctctcacaggagagggcgtt
cagggtgcttcccagctcctctttaagcttggggcagaacccttcacccggcaggtaccc
acatccgtggagaactggtgctgtccaccttcgggctttcggcgccaccggcctcatctt
ggcaaaggtcagatgtcggctctgggacagccgtcagattatctagttctgctgcccaag
tgcactgacagcaactggcagagttgtaatcactgtaaattcagccttctaagagagggc
gctttcaaggtcattgtgcctttaagggaaccttctccccagtccctctggatgctggtg
cttaaagctataagaagcgggccagacccttttaaacctatctggagtgctgcaggaaga
gaagtaaatgcacatcgccctgccagccacacagagaagcaaattcttatgacttttgac
tgtaatgacatctggaatgatccagaagaccctgccctggggtcccagagtcagctgctg
ctctggatgccaccagtagagggggcaggagctgctgccatcccctatgccaggagggtg
gaccagaagttcataccacctttacacccagttcttggaacacccctccctgcattctac
ttctga

>gi568815588r:102576897_102805490|GENSCAN_predicted_peptide_4|318_aa
MEADLSGFNIDAPRWDQRTFLGRVKHFLNITDPRTVFVSERELDWAKVMVEKSRMGVVPP
GTQVEQLLYAKKLYDSAFHPDTGEKMNVIGRMSFQLPGGMIITGFMLQFYRTMPAVIFWQ
WVNQSFNALVNYTNRNAASPTSVRQMALSYFTATTTAVATAVGMNMLTKKAPPLVGRWVP
FAAVAAANCVNIPMMRQQELIKGICVKDRNENEIGHSRRAAAIGITQVVISRITMSAPGM
ILLPVIMERLEKLHFMQPHLHGASGVWAFPTEMVSAVHSLLGLIDHAASALPDLPAVQKE
TGKGQEGQHLSEDKCPSA

>gi568815588r:102576897_102805490|GENSCAN_predicted_CDS_4|957_bp
atggaggctgacctgtctggctttaacatcgatgccccccgttgggaccagcgcaccttc
ctggggagagtgaagcacttcctaaacatcacggacccccgcactgtctttgtatctgag
cgggagctggactgggccaaggtgatggtggagaagagcaggatgggggttgtgccccca
ggcacccaagtggagcagctgctgtatgccaagaagctgtatgactcggccttccacccc
gacactggggagaagatgaatgtcatcgggcgcatgtctttccagcttcctggcggcatg
atcatcacgggcttcatgctccagttctacaggacgatgccggcggtgatcttctggcag
tgggtgaaccagtccttcaatgccttagtcaactacaccaacaggaatgcggcttccccc
acatcagtcaggcagatggccctttcctacttcacagccacaaccactgctgtggccacg
gctgtgggcatgaacatgttgacaaagaaagcgccgcccttggtgggccgctgggtgccc
tttgccgctgtggctgcggctaactgtgtcaatatccccatgatgcgacagcaggagctc
ataaagggaatctgcgtgaaggacaggaatgaaaatgagattggtcattcccggagagct
gcggccataggcatcacccaagtagttatttctcggatcaccatgtcagctcctgggatg
atcttgctgccagtcatcatggaaaggcttgagaaattgcacttcatgcagcctcatctt
catggtgccagtggcgtgtgggcttttcccacagaaatggtatctgctgttcattcctta
cttggtttaattgaccatgctgccagcgcgctccctgatctgcctgctgtccagaaggag
acagggaaggggcaggaagggcagcacctgtctgaggacaagtgtccatcagcctaa

>gi568815588r:102576897_102805490|GENSCAN_predicted_peptide_5|105_aa
MALLLLQALPSPLSARAEPPQPETLSPIQGHFTFSDLQYIHLGSRDSNILLPAVFQLIEG
AAKMDGACFVQGIVLGPVRDMEVNVSHLTPKLLTLEEKISALSER

>gi568815588r:102576897_102805490|GENSCAN_predicted_CDS_5|318_bp
atggcgctcctgctcctccaggcgctgcccagccccttgtcagccagggctgaacccccg
cagccagaaacccttagtccaatccaaggtcactttacattttcagacctccagtatatt
catctgggaagcagggatagcaatatcctgttaccagctgtattccagctgatagaagga
gcagctaaaatggatggggcctgctttgtgcaaggcatcgtgcttggtcctgtgagggat
atggaagtgaacgtttcacatcttacccctaagttgcttactttagaggagaagatatca
gcgcttagtgaacgttag

>gi568815588r:102576897_102805490|GENSCAN_predicted_peptide_6|93_aa
MPDVWESRTVEASFNPVFLKQFLTQYGSFSAYDGVMFWACRPVESGRLQRHWTLVHGPLF
HPWTLRRKSSPQEFLITGLFCYRDFITISSNQQ

>gi568815588r:102576897_102805490|GENSCAN_predicted_CDS_6|282_bp
atgcctgatgtatgggagagcagaacagtggaagcatcatttaatccagtgttcctcaaa
cagtttttaacacagtacggaagtttctcggcttacgatggggtcatgttctgggcatgc
aggcctgtggagtctggcaggctacagaggcactggaccctggttcatggaccactcttt
cacccctggacacttagaaggaaaagcagtccccaggaattcctcatcactggcctcttc
tgctacagagattttatcaccatttccagcaaccagcaatag