GENSCAN 1.0	Date run:  5-Nov-116	Time: 05:29:56

Sequence gi568815595r:23793098_24010904 : 217807 bp : 41.68% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   7961   7976   16  1  1   83   94     6 0.553   1.12
 1.02 Intr +  12906  12991   86  1  2  100   80    60 0.845   5.02
 1.03 Intr +  14140  14324  185  0  2  116   69   252 0.947  23.76
 1.04 Intr +  18363  18413   51  0  0   86  109    55 0.185   4.50
 1.05 Intr +  22397  22595  199  2  1  106   31    36 0.109  -1.87
 1.06 Intr +  26594  26724  131  1  2   60   31   125 0.393   2.57
 1.07 Intr +  28887  29014  128  0  2   82   73    94 0.359   6.70
 1.08 Intr +  48987  49056   70  1  1   60  110    30 0.006  -0.28
 1.09 Term +  67021  67144  124  1  1   19   46   135 0.017  -0.72
 1.10 PlyA +  67674  67679    6                               1.05

 2.00 Prom +  68474  68513   40                              -3.05
 2.01 Init +  68522  68796  275  1  2   43   72   193 0.422   9.69
 2.02 Intr +  80033  80108   76  2  1   64  115    49 0.147   3.80
 2.03 Intr +  85548  85714  167  2  2   26  101   103 0.397   3.24
 2.04 Intr +  86515  86601   87  1  0   93   94    48 0.381   4.07
 2.05 Intr +  94470  94602  133  0  1   53  116   121 0.748  11.13
 2.06 Intr + 101069 101298  230  1  2    8   72   154 0.286   1.54
 2.07 Term + 101741 101939  199  2  1   53   41   128 0.681   0.49
 2.08 PlyA + 103224 103229    6                               1.05

 3.04 PlyA - 104719 104714    6                               1.05
 3.03 Term - 107952 107672  281  1  2   36   37   265 0.767  10.82
 3.02 Intr - 109876 109789   88  1  1   47   36   122 0.512   1.52
 3.01 Init - 114582 114520   63  0  0   69   81    72 0.610   5.80
 3.00 Prom - 121230 121191   40                              -7.15

 4.00 Prom + 123205 123244   40                              -7.45
 4.01 Init + 124763 124934  172  1  1   99  102   209 0.995  23.05
 4.02 Intr + 125343 125479  137  1  2   91   84   171 0.999  16.37
 4.03 Term + 126099 126404  306  2  0   91   34   206 0.998   9.63
 4.04 PlyA + 126434 126439    6                               1.05

 5.03 PlyA - 126780 126775    6                               1.05
 5.02 Term - 133435 133287  149  2  2   64   43   206 0.978  10.78
 5.01 Init - 134457 134391   67  0  1   65   44    26 0.304  -2.81
 5.00 Prom - 137460 137421   40                              -7.55

 6.00 Prom + 139858 139897   40                              -6.65
 6.01 Init + 143864 143989  126  1  0   63   97   132 0.847  11.81
 6.02 Intr + 153108 153385  278  2  2    4   -9   269 0.007   4.19
 6.03 Intr + 161501 161706  206  2  2   88  108    95 0.410   9.42
 6.04 Intr + 162940 163028   89  2  2   96   98    49 0.973   5.47
 6.05 Intr + 166574 166718  145  1  1   82   80    77 0.990   5.23
 6.06 Intr + 168880 169508  629  2  2   50   40   468 0.758  29.20
 6.07 Intr + 171880 172065  186  0  0   48   92    75 0.650   2.86
 6.08 Intr + 174716 174926  211  1  1  113  115   210 0.998  23.76
 6.09 Term + 184126 184322  197  2  2   60   48   114 0.804   1.19
 6.10 PlyA + 184429 184434    6                               1.05

 7.04 PlyA - 185333 185328    6                               1.05
 7.03 Term - 188646 188255  392  1  2   30   37   282 0.872  11.46
 7.02 Intr - 189310 188991  320  0  2   85   97   177 0.628  12.98
 7.01 Init - 195970 195897   74  1  2  115   99    27 0.910   7.17
 7.00 Prom - 202234 202195   40                              -6.85

 8.04 PlyA - 202656 202651    6                               1.05
 8.03 Term - 210021 209816  206  1  2   29   38   137 0.087  -0.65
 8.02 Intr - 211354 211235  120  2  0  128   91     5 0.104   4.35
 8.01 Init - 216311 216227   85  2  1   24   68   126 0.525   5.23

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term - 124294 124073  222  1  0   71   45   314 0.993  21.33
S.002 Init - 124441 124418   24  1  0   67   79    33 0.811  -0.11
S.003 Term - 158721 158500  222  0  0   60   37   157 0.940   3.73
S.004 Init - 159096 158869  228  0  0   88   63   111 0.918   7.04


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815595r:23793098_24010904|GENSCAN_predicted_peptide_1|329_aa
MTQIEARERHEWPGPAAAAAAAAAAARRSQTQREGLFAGWGGGFAMSDDDSRASTSSSSS
SSSNQQTEKETNTPKKKESKVSMSKNSKLLSTSAKRIQKELADITLDPPPNCRCSKLALC
ILPRSFCEFTLCFSGIPIPPRIGGNGNEMSVQKSQAAHHGSQWKEILFLQQWSVTYLVQK
IVEIAGEIAVTFYSCPLLAVFLSWHPSSFGNFDLPAITEKLWTKERHHEKSAQDEDSGIW
HLEVYTRKSQQRRQKENQESVVLESSESKCGVTFGLTIMGSGISDVRIRLKFRAQPFAAS
LLSQLSVLGFWVLSPWLDEDERSDPLRFL

>gi568815595r:23793098_24010904|GENSCAN_predicted_CDS_1|990_bp
atgacccaaattgaagcgagagagagacacgagtggccaggcccagccgcagccgcagca
gcagccgccgcggcggcacggaggagccagacacaaagagaggggctgtttgcggggtgg
ggtggggggttcgctatgtcggatgacgattcgagggccagcaccagctcctcctcatct
tcgtcttccaaccagcaaaccgagaaagaaacaaacacccccaagaagaaggagagtaaa
gtcagcatgagcaaaaactccaaactcctctccaccagcgccaagagaattcagaaggag
ctggcggacatcactttagaccctccacctaattgcagatgctccaagttagcactttgt
atacttccacgtagtttctgtgaatttacattgtgtttttctggcattccaatacctcct
cgaattggtggtaatggtaatgagatgtcagttcagaagtcccaggctgctcatcatggt
tcacaatggaaagagatccttttcttgcaacagtggagtgttacatacctcgtccagaaa
atagtggaaattgctggggaaattgctgtcacattttacagctgtccattgctggcagtc
tttctgagttggcacccaagcagttttggcaattttgaccttcctgcaatcacagagaag
ctctggacaaaggaaaggcatcatgagaagagtgcccaggatgaagactcaggcatctgg
catttagaagtgtacactaggaaaagccagcaaaggagacagaaggaaaatcaagagagt
gtggtattagaaagcagtgaaagtaaatgtggtgtaacttttggtttgactataatgggc
agtggaatctcagatgttaggatcagactgaaattcagagctcagccctttgctgccagc
ttgctctcacagctgtctgtccttggtttctgggtgctttcaccttggctagatgaagat
gaacgttctgacccgctcaggtttctgtag

>gi568815595r:23793098_24010904|GENSCAN_predicted_peptide_2|388_aa
MPRETHWRRNTQVDGRREECTGVGAHWDASRPSTGGMTQSLAGAVGEELGHQAARLQGKT
ISLLAAPSAESCFHSIKPRTHSPSPHVILFFWLWPSHTWCRFRKISQYKCEKMGVKMAHA
NPIVNCSCEGSRLRAPYENLMPDDLLLSPITPTWDCLVAGKQARGLPTDSTLCVCPNIWG
GALIPVRGHQGGLGRGGGQGTSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFTPEY
PFKPPKTLRVTEYSSQSSGRRRDPKPDFQIVPVKITQDDVTVDNGQQELSKASLRSSSEL
IRSWNHYCLPSCLYIELELPVLQPAPQLLLITELTHGQPALAVTLVIILSDFTGHVDAAS
SNLVSYSLTSPMVSSSLPQPFTTPVVIS

>gi568815595r:23793098_24010904|GENSCAN_predicted_CDS_2|1167_bp
atgccgagagaaacacattggcgaaggaatacacaggtggatggacgtcgagaggaatgc
actggtgtaggagcacactgggatgccagcaggccatcgactggtggaatgacacaaagt
ttggctggggcagttggagaagagttgggccaccaagcggccagactccaggggaaaacc
atttcccttctggctgccccatctgctgagagctgcttccactcaataaaacctcgcact
cattctccaagcccacatgtgatcctattcttctggctgtggccctctcacacctggtgt
agattcaggaaaatctcacagtacaaatgtgagaaaatgggagtaaaaatggcacacgca
aaccctattgtgaactgctcatgtgagggatctaggttgcgtgctccttatgagaatcta
atgcctgatgatctgctactgtcacccatcacccccacatgggactgtctagttgcagga
aaacaagctcgggggctccccactgattctacattatgcgtctgtcctaacatctgggga
ggtgctctgatacctgtccgtgggcaccagggaggcctgggccgcggcggaggacagggc
accagtgctggtcccaaaggcgataacatctatgaatggagatcaaccattctagggcct
ccaggatccgtgtatgagggtggtgtattctttctcgatatcacttttacaccagaatat
cccttcaagcctccaaagacactgcgcgtgacagaatacagcagtcaaagctcggggagg
agaagagaccccaaaccagattttcagatagtgcccgtaaagattacacaagacgatgtg
acagtagacaatgggcagcaagaactgtcaaaggcctctctgaggagcagcagtgaactc
atcagatcttggaaccactactgtcttccttcctgtctgtacattgagcttgagctccct
gtgctccagccggccccccaactgctcctcatcacagagctgactcatggtcaacctgct
ctcgccgttactctggtcataattcttagtgatttcactggccacgtagatgctgcttcc
agtaacctggtctcttattctttgacttctccaatggtctcatcatccttacctcagcca
ttcaccactcccgtggtcatatcctag

>gi568815595r:23793098_24010904|GENSCAN_predicted_peptide_3|143_aa
MVKRGSNGNYTFSATDSICTKILQIPLDGDKELAASVLGAERESRRTSTFRMEDCETMED
VYMASVETDRGVKEQLHLYDTRGLQEGVELPKHYFSFADGFVLVYSVNNLESFQRVELLK
KEIDKFKDKKEASGYVKNAKCEL

>gi568815595r:23793098_24010904|GENSCAN_predicted_CDS_3|432_bp
atggtgaagagaggatctaatggcaactatacgtttagtgccactgactcgatttgcact
aagattctccagattcccctggatggggataaagagctggctgccagtgttttgggagca
gaaagggaaagccggaggacttcaacattcagaatggaagattgcgaaacaatggaagat
gtatacatggcttcagtagaaacagaccgaggagtaaaagaacagttacatctttatgac
accagaggtctacaggaaggcgtggagctgccaaagcattatttttcatttgctgatggc
ttcgttcttgtgtacagtgtgaataaccttgaatcctttcaaagagtggagcttctgaag
aaagaaatcgataagttcaaagacaaaaaagaggcaagtggatatgttaaaaatgccaaa
tgtgaattataa

>gi568815595r:23793098_24010904|GENSCAN_predicted_peptide_4|204_aa
MGAYKYIQELWRKKQSDVMRFLLRVRCWQYRQLSALHRAPRPTRPDKARRLGYKAKQGYV
IYRIRVRRGGRKRPVPKGATYGKPVHHGVNQLKFARSLQSVAEERAGRHCGALRVLNSYW
VGEDSTYKFFEVILIDPFHKAIRRNPDTQWITKPVHKHREMRGLTSAGRKSRGLGKGHKF
HHTIGGSRRAAWRRRNTLQLHRYR

>gi568815595r:23793098_24010904|GENSCAN_predicted_CDS_4|615_bp
atgggtgcatacaagtacatccaggagctatggagaaagaagcagtctgatgtcatgcgc
tttcttctgagggtccgctgctggcagtaccgccagctctctgctctccacagggctccc
cgccccacccggcctgataaagcgcgccgactgggctacaaggccaagcaaggttacgtt
atatataggattcgtgttcgccgtggtggccgaaaacgcccagttcctaagggtgcaact
tacggcaagcctgtccatcatggtgttaaccagctaaagtttgctcgaagccttcagtcc
gttgcagaggagcgagctggacgccactgtggggctctgagagtcctgaattcttactgg
gttggtgaagattccacatacaaattttttgaggttatcctcattgatccattccataaa
gctatcagaagaaatcctgacacccagtggatcaccaaaccagtccacaagcacagggag
atgcgtgggctgacatctgcaggccgaaagagccgtggccttggaaagggccacaagttc
caccacactattggtggctctcgccgggcagcttggagaaggcgcaatactctccagctc
caccgttaccgctaa

>gi568815595r:23793098_24010904|GENSCAN_predicted_peptide_5|71_aa
MPIKSNAFISFGGVSCRLPGFQKNDTKKKKRKKRKRKEKERKRKKRKKREEEDEEQEEEE
EGGGGRRKKKK

>gi568815595r:23793098_24010904|GENSCAN_predicted_CDS_5|216_bp
atgccaattaaatcaaatgctttcatcagttttggaggagtgagttgccgtttgccagga
tttcagaagaatgacacaaaaaaaaagaagaggaagaagaggaagaggaaagagaaggag
agaaagaggaagaagagaaaaaagagagaagaggaggacgaggagcaagaggaggaggag
gaaggaggaggaggaagaagaaagaagaagaaataa

>gi568815595r:23793098_24010904|GENSCAN_predicted_peptide_6|688_aa
MRCTWRIHQWRRAPDKLKLSEELIVEKGPTWVSKSPLSIGDKRALTPQCTGRRTLFSRGD
PKARTPRKPNEPAPGEAGSCIPCRFRGGSAGRGRAAGRRRRLGEGVGLSRRDTLEGALRC
FDPERLPADWVAPPLEGSENSFQSSSSSVPSSPNSSNSDTNGNPKNGDLANIEGILKNDR
IDCSMKTSKSSAPGMTKSHSGVTKFSGMVLLCKVCGDVASGFHYGVHACEGCKGFFRRSI
QQNIQYKKCLKNENCSIMRMNRNRCQQCRFKKCLSVGMSRDAVRFGRIPKREKQRMLIEM
QSAMKTMMNSQFSGHLQNDTLVEHHEQTALPAQEQLRPKPQLEQENIKSSSPPSSDFAKE
EVIGMVTRAHKDTFMYNQEQQENSAESMQPQRGERIPKNMEQYNLNHDHCGNGLSSHFPC
SESQQHLNGQFKGRNIMHYPNGHAICIANGHCMNFSNAYTQRVCDRVPIDGFSQNENKNS
YLCNTGGRMHLVCPMSKSPYVDPHKSGHEIWEEFSMSFTPAVKEVVEFAKRIPGFRDLSQ
HDQVNLLKAGTFEVLMVRFASLFDAKERTVTFLSGKKYSVDDLHSMGAGDLLNSMFEFSE
KLNALQLSDEEMSLFTAVVLVSADRSGIENVNSVEALQETLIRALRTLIMKNHPNEASIF
TKLLLKLPDLRSLNNMHSEELLAFKVHP

>gi568815595r:23793098_24010904|GENSCAN_predicted_CDS_6|2067_bp
atgcgctgcacttggagaattcaccagtggaggagagctcctgataaactgaagctgagt
gaagagttgattgttgaaaagggacccacctgggtctctaagtctcctctaagtattggc
gacaagcgggcgctgacaccgcagtgcaccggacgccgcacgctcttttcgcgaggtgac
cccaaggcgcggaccccgcgcaaaccaaacgaaccggcgcctggggaggctggtagctgc
ataccttgcagattccgaggaggaagtgcaggacgagggcgtgctgcaggccggaggagg
cgcctcggggaaggcgtggggctttcccgaagggatacgctcgaaggagctctgaggtgc
ttcgatcccgagcgactccccgcagactgggtagcaccgccccttgagggttctgagaat
agtttccagtcctcctcctcttctgttccatcttctccaaatagctctaattctgatacc
aatggtaatcccaagaatggtgatctcgccaatattgaaggcatcttgaagaatgatcga
atagattgttctatgaaaacaagcaaatcgagtgcacctgggatgacaaaaagtcatagt
ggtgtgacaaaatttagtggcatggttctactgtgtaaagtctgtggggatgtggcgtca
ggattccactatggagttcatgcttgcgaaggctgtaagggtttctttcggagaagtatt
caacaaaacatccagtacaagaagtgcctgaagaatgaaaactgttctataatgagaatg
aataggaacagatgtcagcaatgtcgcttcaaaaagtgtctgtctgttggaatgtcaaga
gatgctgttcggtttggtcgtattcctaagcgtgaaaaacagaggatgctaattgaaatg
caaagtgcaatgaagaccatgatgaacagccagttcagtggtcacttgcaaaatgacaca
ttagtagaacatcatgaacagacagccttgccagcccaggaacagctgcgacccaagccc
caactggagcaagaaaacatcaaaagctcttctcctccatcttctgattttgcaaaggaa
gaagtgattggcatggtgaccagagctcacaaggatacctttatgtataatcaagagcag
caagaaaactcagctgagagcatgcagccccagagaggagaacggattcccaagaacatg
gagcaatataatttaaatcatgatcattgcggcaatgggcttagcagccattttccctgt
agtgagagccagcagcatctcaatggacagttcaaagggaggaatataatgcattaccca
aatggtcatgccatttgtattgcaaatggacattgtatgaacttctccaatgcttatact
caaagagtatgtgatagagttccgatagatggattttctcagaatgagaacaagaatagt
tacctgtgcaacactggaggaagaatgcatctggtttgtccaatgagtaagtctccatat
gtggatcctcataaatcaggacatgaaatctgggaagaattttcgatgagcttcactcca
gcagtgaaagaagtggtggaatttgcaaagcgtattcctgggttcagagatctctctcag
catgaccaggtcaaccttttaaaggctgggacttttgaggttttaatggtacggttcgca
tcattatttgatgcaaaggaacgtactgtcacctttttaagtggaaagaaatatagtgtg
gatgatttacactcaatgggagcaggggatctgctaaactctatgtttgaatttagtgag
aagctaaatgccctccaacttagtgatgaagagatgagtttgtttacagctgttgtcctg
gtatctgcagatcgatctggaatagaaaacgtcaactctgtggaggctttgcaggaaact
ctcattcgtgcactaaggaccttaataatgaaaaaccatccaaatgaggcctctattttt
acaaaactgcttctaaagttgccagatcttcgatctttaaacaacatgcactctgaggag
ctcttggcctttaaagttcacccttaa

>gi568815595r:23793098_24010904|GENSCAN_predicted_peptide_7|261_aa
MANLKLPMRSQLAHKIPETLAFMSWLRSACSPCYWHSLRPWSKVGAKSWGHEQQQETDGF
LGRRRRVPSEAPPSGYRGPECWQLSRQPCRPEWKLVVPFPGPPMAARGPISMHFLLSEAH
KIPRLSQSWGKAPLHLTLHSSVYLILPGCRTRTWDPLNGKAKSCNTNRIETCPLLTTLWV
KERKAAASPSGTSHLGTPQAKAVIPSLEPCGSWHLQPSGHHCIPRCQLGKLLMVHLVQLQ
PRREPAPGDVYPMAAADVSAQ

>gi568815595r:23793098_24010904|GENSCAN_predicted_CDS_7|786_bp
atggccaatctcaagctaccaatgcgaagtcaactggctcacaaaattcctgaaacattg
gctttcatgagctggctcagaagtgcctgttccccctgctattggcactcactccgacct
tggagcaaagttggggccaagtcctggggtcatgaacagcagcaagagacagacgggttc
ctgggcagaaggaggcgggtccccagtgaggccccaccttcaggctacagagggcctgaa
tgctggcaactgagccgccagccctgcagaccagagtggaaacttgtggtgccttttcca
ggcccacccatggctgcccgtggaccaatcagcatgcacttcctcctctccgaggcccat
aaaatccctaggctgagtcagagctggggaaaagctcctcttcatcttaccctccactca
tctgtgtacctcattcttcctggttgcaggacaagaacttgggacccactgaatggcaaa
gctaaaagttgtaacacaaataggattgaaacatgccccttgctcaccacgctgtgggtg
aaggagagaaaagctgcagccagcccttcagggacgtcacacctgggaacgccccaagcc
aaggctgtgattccctctttggagccctgtggttcctggcatcttcagccttccggccac
cactgcattcccaggtgccagctgggaaagctgctcatggtgcacctggtccagctgcag
cctcgcagagagcctgcacctggagatgtctatcccatggcagcagctgatgtgtctgca
cagtag

>gi568815595r:23793098_24010904|GENSCAN_predicted_peptide_8|136_aa
MKPQQQKTAIRNTKMFVEKKDDKIMHKAGPHRSSAYRQKWKKKVENTHLNHLSQEVAHIT
HHFSLYAIVNEHLLSTYYALSATLEAEDAEKLQSISSRSLRFCGVRGKRRKHNSADEGAL
KSNWWKPRKCPKGDGG

>gi568815595r:23793098_24010904|GENSCAN_predicted_CDS_8|411_bp
atgaaaccacagcaacagaaaactgccatccgaaacactaagatgttcgtggaaaaaaag
gatgacaagataatgcacaaagcagggcctcacaggtcttctgcatacaggcagaagtgg
aaaaagaaagtggagaacacacatcttaaccacctcagccaggaagtggcacacattaca
catcatttctcactatatgccattgtcaatgagcatttactgagcacctactatgctcta
agtgccacactagaggctgaagatgctgagaaactacaatctatatcctcaagaagctta
cggttctgtggagtcagggggaaaaggaggaagcataactcagcagatgaaggagccctt
aagtcaaactggtggaaacccagaaagtgtcccaagggagatggtggctga