GENSCAN 1.0	Date run:  5-Nov-116	Time: 05:26:55

Sequence gi568815593f:110639120_110861779 : 222660 bp : 36.07% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Term +    381    598  218  1  2   92   48   100 0.810   2.72
 1.02 PlyA +   1541   1546    6                               1.05

 2.05 PlyA -   1940   1935    6                               1.05
 2.04 Term -  11640  11524  117  0  0  137   38     2 0.512  -2.34
 2.03 Intr -  15813  15613  201  0  0   71   86   149 0.727  11.56
 2.02 Intr -  42321  42299   23  1  2  100   91    25 0.066   0.34
 2.01 Init -  43693  43681   13  1  1   88  110   -11 0.088   1.60
 2.00 Prom -  49957  49918   40                              -5.55

 3.00 Prom +  52745  52784   40                              -3.85
 3.01 Sngl +  54228  54764  537  2  0   88   45   491 0.740  40.63
 3.02 PlyA +  55106  55111    6                               1.05

 4.00 Prom +  55638  55677   40                              -6.15
 4.01 Init +  55731  56498  768  2  0   49   44   272 0.002  13.63
 4.02 Term +  57758  58513  756  1  0   34   48   256 0.012   8.64
 4.03 PlyA +  58572  58577    6                              -0.45

 5.00 Prom +  58846  58885   40                              -3.65
 5.01 Init +  68196  68331  136  2  1  109    3    71 0.270   1.05
 5.02 Term +  71777  71964  188  0  2   45   36   168 0.886   3.97
 5.03 PlyA +  72053  72058    6                               1.05

 6.00 Prom +  77506  77545   40                              -2.55
 6.01 Init + 100001 100283  283  1  1   70   69   375 0.930  31.05
 6.02 Intr + 102928 102970   43  2  1   92   90    46 0.445   1.58
 6.03 Intr + 117583 117640   58  1  1   65   99    26 0.222  -0.63
 6.04 Term + 122085 122663  579  2  0   71   50   337 0.992  21.70
 6.05 PlyA + 122868 122873    6                               1.05

 7.00 Prom + 133872 133911   40                              -3.95
 7.01 Sngl + 135857 136828  972  1  0   44   37   323 0.943  19.28
 7.02 PlyA + 137138 137143    6                              -0.45

 8.00 Prom + 137187 137226   40                             -11.44
 8.01 Init + 137346 138949 1604  2  2   42   53   438 0.306  27.60
 8.02 Intr + 174468 174644  177  0  0   90   78    50 0.029   2.31
 8.03 Term + 184539 184773  235  0  1   76   51   154 0.076   5.31
 8.04 PlyA + 186190 186195    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl +  55308  56582 1275  2  0   71   43   347 0.861  24.16
S.002 Term - 165269 165046  224  0  2   75   47   160 0.856   6.70


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815593f:110639120_110861779|GENSCAN_predicted_peptide_1|72_aa
XPSHVHEDCDDYTSSGIMFLPSKLDRNKEEYRQERHVFFKSKSTKSTGNVAVFTSLCSGP
GHVTTPNQITSK

>gi568815593f:110639120_110861779|GENSCAN_predicted_CDS_1|219_bp
nttccctctcatgtgcatgaggactgtgatgactacacaagctcaggcatcatgttctta
ccaagcaaactagacaggaacaaggaagagtataggcaggaaaggcatgtctttttcaaa
agcaagtcaacaaaaagtacaggaaatgtagctgtctttacatcactgtgctcaggacca
ggtcatgtgactacccctaatcaaatcactagcaagtga

>gi568815593f:110639120_110861779|GENSCAN_predicted_peptide_2|117_aa
MEGSGEKLKLEQVSELPFTISSKRIKYLGIQLTRDVKGLFKENYKPLLNEMKEDTNKWKN
IPCSWVGRINIVKMAILPKDPIQDTTLHLVIMSPLALLGWDSFSDFVFNDHDNFEEY

>gi568815593f:110639120_110861779|GENSCAN_predicted_CDS_2|354_bp
atggagggatcaggtgagaaactgaaacttgaacaggtgagtgaactcccattcacaatt
tcttcaaagagaataaaatacttaggaatccaacttacaagggacgtgaagggcctcttc
aaggagaactacaaaccgctgctcaatgaaatgaaagaggacacaaacaaatggaagaac
attccatgctcatgggtaggaagaatcaatatcgtgaaaatggccatactgcccaaggat
cccatacaggacactacattacatttagttataatgtctcctttggctcttctaggctgg
gacagtttctcagactttgtttttaatgaccatgacaattttgaagagtactag

>gi568815593f:110639120_110861779|GENSCAN_predicted_peptide_3|178_aa
MGKKQSRKTGNSKNQSASPPPKECSSSPATEESWIENDFDKLREEGFRRSNYSELKEEVP
TNGKEVKNPEKRLDEWLTRITNAEKSLKDLMELKTTAQQLRDESTSLSSRCDQLEERVSM
MEDEMNEMKQEGKFREKRIKRNKQSLQEIWDYVKRPNLRLIGVPESDGENGTKLENTL

>gi568815593f:110639120_110861779|GENSCAN_predicted_CDS_3|537_bp
atggggaaaaaacagagcagaaaaactggaaactctaaaaatcagagtgcctctcctcct
ccaaaggaatgcagctcctcaccagcaacagaagaaagctggatagagaatgactttgac
aagttgagagaagaaggcttcagaagatcaaactactctgagctaaaggaggaagttcca
accaatggcaaagaagttaaaaaccctgaaaaacgattagatgaatggctaactagaata
accaatgcagagaagtccttaaaggacctgatggagctgaaaaccacggcacaacaacta
cgtgacgaatccacaagcctcagtagccgatgtgatcaactggaagaaagggtatcaatg
atggaagatgaaatgaatgaaatgaagcaagaagggaagtttagagaaaaaagaataaaa
agaaacaaacaaagcctccaagaaatatgggactatgtgaaaagaccaaatctacgtctg
attggtgtacctgaaagtgacggggagaatggaaccaagttggaaaacactctgtag

>gi568815593f:110639120_110861779|GENSCAN_predicted_peptide_4|507_aa
MGDFNTPLSTLDRSKRQKVHKDILELNTALHQEDLIDIYRTLHPKSTEYTFFSAPHHTYS
KIEHIVGSKALLSKCKRTEIITNCLSDHSAIKLELSIKKLTQNHSTTWKLNNLLLNDYWV
HKEMKAEIKMFFETNENKDTTYQNLWDAFKAVCRGKFIALNAHKRKQERSKIDTVTSQLK
ELEEQEQTHSKASRRQAITKIRAELKGIETQKTPQKINESRSWFFEKINKIDRLLARLIK
KKREKNQIDTIKNDKGVIYRFNAIPIKLPMSFFTELEKTTLKFIWNQKRARIAKSILSQK
NKAGGITLPDFKLYYKPTVTKTAWYWYQNRDTDQRNTTEPSEIMPHICNHLIFDKPDKNK
KWGKDSLFKKWCWENWLATHRKMKPDPFLTPYTKINSRWIKDLHVRPKTMKTLEENLGNI
IQDIGMGKDFMSKTPKAMATKAKIDKWDLIKLKSFCTAEETTIRVNRQPTEWEKIFTIYS
SDKGLISRIYNELKQIYKKKTNNPINK

>gi568815593f:110639120_110861779|GENSCAN_predicted_CDS_4|1524_bp
atgggagactttaacaccccactgtcaacattagacagatcaaagagacagaaagttcac
aaggatatcctggaattgaacacagctctgcaccaagaggacttaatagacatctacaga
actctccaccccaaatcaacagaatatacattcttttcagcaccacaccacacctattcc
aaaattgaacacatagttggaagtaaagcactcctcagcaaatgtaaaagaacagaaatt
ataacaaactgtctctcagaccacagtgcaatcaaactagaactcagcattaagaaactc
actcaaaaccactcaactacatggaaactgaacaacctgctcctgaatgactactgggta
cataaagaaatgaaggcagaaataaagatgttcttcgaaaccaatgagaacaaagacaca
acataccagaatctctgggacgcattcaaagcagtgtgtagagggaaatttatagcacta
aatgcccacaagagaaagcaggaaagatctaaaattgacacggtaacatcacaattaaaa
gaactagaggagcaagagcaaacacattcaaaagctagcagaaggcaagcaataactaaa
atcagagcagaactgaagggaatagagacacaaaaaacccctcaaaaaatcaatgaatcc
aggagctggttttttgaaaagatcaacaaaattgatagactgctagcaagactaataaag
aagaaaagagagaagaatcaaatagacacaataaaaaatgataaaggggtaatttataga
ttcaatgccatccccatcaagctaccaatgagtttcttcacggaattggaaaaaactact
ttaaagttcatatggaaccagaaaagagcccgcattgccaagtcaattctgagccaaaag
aacaaagctggaggcatcacgctacctgacttcaaactatactacaagcctacagtaacc
aaaacagcatggtactggtaccaaaacagagatacagaccaacggaacacaacagagccc
tcagaaataatgccgcatatctgcaaccatctgatctttgacaaacctgacaaaaacaag
aaatggggaaaggattccctatttaagaaatggtgctgggaaaactggctagccacacat
agaaagatgaaaccagatcccttccttacaccttatacaaaaattaattcaagatggatt
aaagacttacatgtcagacctaaaaccatgaaaactctagaagaaaacctaggcaatatc
attcaggacataggcatgggcaaggacttcatgtctaaaacaccaaaagcaatggcaaca
aaagccaaaattgacaaatgggatctaattaaactgaagagcttctgcacagcagaagaa
actaccatcagagtgaacaggcaacctacagaatgggagaaaatttttacaatctactca
tctgacaaagggctaatatccagaatctacaatgaactcaaacaaatttacaagaaaaaa
acaaacaaccccatcaacaagtag

>gi568815593f:110639120_110861779|GENSCAN_predicted_peptide_5|107_aa
MAQKKNVCNWRRESAVTAGLNVEINAALSQWITKLCWAQPEPVHEILEVLARAIRQEKET
KGIQIGKKEIKLSLFANDMTLYLEESKDFTKKRLELTNKFSKVAEYK

>gi568815593f:110639120_110861779|GENSCAN_predicted_CDS_5|324_bp
atggcacagaaaaagaatgtgtgtaattggaggagggagagtgcagtaactgcaggactt
aacgttgaaatcaatgctgccctgtcacagtggataacaaagctctgctgggcacagcca
gaacctgtgcatgaaatactggaagtcttagctagagcaatcagacaagagaaagaaaca
aagggcatccaaattggaaagaaagaaatcaaattatccttgtttgcaaatgatatgacc
ttgtatttggaagaatctaaagacttcaccaaaaaacgattagaactgacgaacaaattc
agtaaagttgcagaatacaaataa

>gi568815593f:110639120_110861779|GENSCAN_predicted_peptide_6|320_aa
MHPRRPDGFDGLGYRGGARDEQGFGGAFPARSFSTGSDLGHWVTTPPDIPGSRNLHWGEK
SPPYGVPTTSTPYEGPTEEPFSSGGGGSVQGQSSEQLNRFAGFGIGLASLTYVVAMPFYS
ASLIETVQSEIIRDNTGILECVKEGIGRVIGMGVPHSKRLLPLLSLIFPTVLHGVLHYII
SSVIQKFVLLILKRKTYNSHLAESTSPVQSMLDAYFPELIANFAASLCSDVILYPLETVL
HRLHIQGTRTIIDNTDLGYEVLPINTQYEGMRDCINTIRQEEGVFGFYKGFGAVIIQYTL
HAAVLQITKIIYSTLLQNNI

>gi568815593f:110639120_110861779|GENSCAN_predicted_CDS_6|963_bp
atgcatccgcggcgcccggacggatttgatggcttgggctaccggggtggtgcccgggac
gagcagggctttggcggcgccttccctgcaaggtccttcagcaccgggtcggacctgggc
cactgggtgacgactcccccagatatccccggcagccgcaacctgcactggggcgagaag
agcccgccctacggcgtgcccaccacctccaccccgtacgaaggccccacggaggaaccc
ttttccagtggcggcggcggcagtgtgcaggggcagagcagtgaacagctgaatagattt
gctggatttggtattggacttgcaagcctaacttacgtggtggcaatgcctttttattca
gcaagtctgattgaaacagtgcagagtgagataattcgagataatactggcattttggag
tgtgttaaagaaggaattggaagagtgataggcatgggagtgcctcatagcaaacgactt
cttccgcttctttccttgatcttccctacggtgcttcatggagttcttcattacatcatc
agctcagttattcagaagtttgtcctactaattctaaagagaaagacttacaatagccac
ctagctgagagcactagccctgtgcagagtatgttggatgcttattttccagaacttatt
gctaactttgctgccagtctttgttctgacgttatactttacccattggaaacagttttg
caccgccttcacattcaaggaacacgcacaataattgacaatacagaccttggctatgaa
gtgcttccaattaatacacaatatgagggaatgagagactgtatcaataccataaggcag
gaggaaggagtgtttggtttttataaagggtttggtgctgttataatacagtacacactg
catgcagctgttttacagattaccaaaattatttactctacacttcttcaaaataacatt
tga

>gi568815593f:110639120_110861779|GENSCAN_predicted_peptide_7|323_aa
MVKGSIQQEELTIVNIYAPNTGAPRFIKQVLSDLQRDLDSHTLIMGDFNTPLSTLDRSMR
QRVNKDTQELNSALHQVDLIDIYRTLHPKSTEYTFFSAPHHTYSKIDHILGSKALLSKCK
RTEIVTNYLSDHSAIKLELRIKNLTQNRSTTWRLNNLLLNDYWVHNEMKAEIKMLFETNE
NKDTTYQNLWDTFKAVCRGKFITLNAHKRKQERSKIDTLTSQLKELEKQEQTYPKASRRQ
ETTKIRAELKEIETQKTLQKINESRSWFFERINKIDRPQARLIKKKREKNQIDTIKNDKG
DITTESHRNTNYHQRILQTPLRK

>gi568815593f:110639120_110861779|GENSCAN_predicted_CDS_7|972_bp
atggtaaagggatcaattcaacaagaagagctaactatcgtaaatatatatgcacccaat
acaggagcaccaagattcataaagcaagtcctgagtgacctacaaagagacttagactct
cacacattaataatgggagactttaacaccccactgtcaacattagacagatcaatgaga
cagagagtcaacaaggatacccaggaattgaactcagctctgcaccaagtggacctaata
gacatctacagaactctccaccccaaatcaacagaatatacatttttttcagcaccacac
cacacctattccaaaattgaccacatacttggaagtaaagctctcctcagcaaatgtaaa
agaacagaaattgtaacaaactatctctcagaccacagtgcaatcaaactagaactcagg
attaagaatctcacccaaaaccgctcaactacatggagactgaacaacctgctcctgaat
gactactgggtacataacgaaatgaaggcagaaataaagatgctctttgaaaccaatgag
aacaaagacacaacataccagaatctctgggacacattcaaagcagtgtgtagagggaaa
tttataacactaaatgcccacaagagaaagcaggaaagatccaaaattgacaccctaaca
tcacaattaaaagaactggaaaagcaagagcaaacatatccaaaagctagcagaaggcaa
gaaacaactaaaatcagagcagaactgaaggaaatagagacacaaaaaacccttcaaaaa
attaatgaatccaggagctggttttttgaaaggatcaacaaaattgatagaccacaagca
agactaataaagaaaaaaagagagaagaatcaaatagacacaataaaaaatgataaaggg
gatatcaccaccgaatcccacagaaatacaaactaccatcagagaatactacaaacacct
ctacgcaaataa

>gi568815593f:110639120_110861779|GENSCAN_predicted_peptide_8|671_aa
MIISIDAEKAFDKIQQTFMLKTLNKLGIDGTYLKIIRAIYDKPTANIILNGQKLEAFPLK
TGTRQGCPLSPLLFNIVLEVLARAIRQEKEIKGIQLGKEEIKLSLFADNMIVYLENPIVS
AQNLLKLISNFSKVSGYKINVQKSQAFLYTNNRQTESQIMSELPFTIASNRIKYPGIQLT
RDVKDLFKENNKPLLKEIKEDTNKWKNIPCSWVGRINIVKMAILPKVIYRLNAIPIKLPM
PFFTELEKTTLKFIWNQKRAHITKSILSQKNKAGGITLPDFKLYYKVTVTKTAWYWYQNR
DIDQWNRTEPSEIMPHIYNYLIFDKPEKNKQWGKDSLFNKWCWENWLAICRKLKLDPFLT
PYTKINSRWNKDLNIRPKTIKTLEENLGITIQDLGMGKDFMSKTPKAMATKDKTDKWDLI
KLKSFCTAKETTIRVNRQPTKWEKIFTTYSSDKGLISRIYNELQQIYKKKTNNPIKKWAM
DMNRHFSKEDIYAAKKHMKKCSSSLAIREMQIKTTMRYHLTPVRMVIIEKSGNNRLECLQ
ALLQVKSISLVQDYELFYDLILHPGKFLRQISKTRDGDNGTLSLRDTFILGAEWTRVQDL
LNMGTENAITSWPSSLHWQTAAAPCDRSGCKAKPAAKLQAKAGQGHCQLGVSSWQVIEKN
PVSFSVGSSGI

>gi568815593f:110639120_110861779|GENSCAN_predicted_CDS_8|2016_bp
atgattatctcaatagatgcagaaaaagcctttgacaaaattcaacaaaccttcatgcta
aaaactctcaataaattaggtattgatgggacatatctcaaaataataagagctatctat
gacaaacccacagccaatatcatactgaatgggcaaaaactggaagcattccctttgaaa
actggcacaagacagggatgccctctctcaccactcctattcaacatagtgttggaagtt
ctggccagggcaattaggcaggagaaggaaataaagggtattcaattaggaaaagaggaa
atcaaattgtccctgtttgcagacaacatgattgtatatctagaaaaccccattgtctca
gcccaaaatctccttaagttgataagcaacttcagcaaagtctcaggatacaaaatcaat
gtacaaaaatcacaagcattcttatacaccaacaacagacaaacagagagccaaatcatg
agtgaacttccattcacaattgcttcaaacagaataaaatacccaggaatccaacttaca
agggatgtgaaggacctcttcaaggagaacaacaaaccactgctcaaggaaataaaagag
gatacaaacaaatggaagaacattccatgctcatgggtaggaagaatcaatatcgtgaaa
atggccatactgcccaaggtaatttatagactcaatgccatccccatcaagctaccaatg
cctttcttcacagaattggaaaaaactactttaaagttcatatggaaccaaaaaagagcc
cacatcaccaagtcaatcctaagccaaaagaacaaagctggaggcatcacactacctgac
ttcaaactatactacaaggttacagtaaccaaaacagcatggtactggtaccaaaacaga
gatatagatcaatggaacagaacagagccctcagaaataatgccgcatatctacaactat
ctgatctttgacaaacctgagaaaaacaagcaatggggaaaggattccctatttaataaa
tggtgctgggaaaactggctagccatatgtagaaagctgaaactggatccattccttaca
ccttatacaaaaattaattcaagatggaataaagacttaaacattagacctaaaaccata
aaaaccctagaagaaaacctaggcattaccattcaggacttaggcatgggcaaggacttc
atgtctaaaacaccaaaagcaatggcaacaaaagacaaaactgacaaatgggatctaatt
aaactaaagagcttctgcacagcaaaagaaactaccatcagagtgaacaggcaacctaca
aaatgggagaaaattttcacaacctactcatctgacaaagggctaatatccagaatctac
aatgaactccaacaaatttacaagaaaaaaacaaacaaccccatcaaaaagtgggcgatg
gacatgaacagacacttctcaaaagaagacatttatgcagccaaaaaacacatgaaaaaa
tgctcatcatcactggccatcagagaaatgcaaatcaaaaccacaatgagatatcatctc
acaccagttagaatggtgatcattgaaaagtcaggaaacaacaggctcgaatgtctccag
gctctgttgcaagtcaagtcaatttctttagtgcaagattatgaactgttttatgacctg
attctccacccagggaaatttctgagacagatatctaagactagggatggagacaatggc
accctctctctgagggacactttcattctaggagctgaatggacaagagttcaggaccta
ctgaacatgggtacagagaacgctataacatcatggccatcttccctccactggcagaca
gcagctgctccatgtgacagaagtggctgtaaagccaagccagccgcgaagctgcaggcc
aaggcagggcaagggcattgccagctgggtgtctccagctggcaagtaatcgagaaaaat
cctgtgtcattttctgtgggctcatctgggatctga