GENSCAN 1.0	Date run:  5-Nov-116	Time: 05:25:42

Sequence gi568815593f:175778906_175980042 : 201137 bp : 47.26% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.06 PlyA -    461    456    6                               1.05
 1.05 Term -  18321  17494  828  0  0   62   49   277 0.265  14.24
 1.04 Intr -  25085  24969  117  2  0   28  109    78 0.297   4.56
 1.03 Intr -  27481  27456   26  2  2   66  113    26 0.250   0.64
 1.02 Intr -  28217  28188   30  0  0   84  105    19 0.203   1.30
 1.01 Init -  31622  31565   58  2  1   79   51    46 0.154   1.47
 1.00 Prom -  32287  32248   40                              -5.36

 2.00 Prom +  32939  32978   40                              -7.56
 2.01 Init +  33302  33420  119  1  2   90   99   101 0.955   9.07
 2.02 Intr +  37722  37849  128  0  2   28   48   119 0.669   2.22
 2.03 Term +  45569  45918  350  0  2   70   49   170 0.713   5.95
 2.04 PlyA +  48853  48858    6                               1.05

 3.05 PlyA -  49154  49149    6                               1.05
 3.04 Term -  54518  54379  140  0  2  110   37    47 0.098  -0.07
 3.03 Intr -  57722  57672   51  0  0   80   85    28 0.071   0.58
 3.02 Intr -  71935  71600  336  2  0   89   89   118 0.246   7.49
 3.01 Init -  81286  81127  160  1  1   12   36   145 0.011   1.69
 3.00 Prom -  82899  82860   40                              -2.86

 4.00 Prom +  89832  89871   40                              -3.46
 4.01 Init +  99835  99865   31  0  1   97   78    63 0.964   6.30
 4.02 Intr + 100003 100178  176  2  2  117   82   381 0.997  40.06
 4.03 Intr + 100943 101136  194  1  2   82   15   399 0.215  30.29
 4.04 Intr + 101713 101824  112  1  1   38   91    54 0.150   1.08
 4.05 Intr + 101864 101984  121  1  1   71   38    33 0.416  -3.33
 4.06 Intr + 104274 104489  216  1  0   49   89    95 0.547   4.18
 4.07 Intr + 105340 105477  138  2  0  103   64    13 0.558   0.84
 4.08 Intr + 121630 121743  114  2  0  116   68    23 0.021   3.52
 4.09 Intr + 126537 126671  135  1  0   -2   76   163 0.088   6.64
 4.10 Intr + 132748 132786   39  2  0   96  100     8 0.518   1.00
 4.11 Intr + 144195 144234   40  1  1  118   77    68 0.111   5.98
 4.12 Intr + 171263 171350   88  2  1   81   80    -5 0.003  -2.03
 4.13 Intr + 176018 176092   75  1  0  115   68    38 0.919   4.21
 4.14 Intr + 176729 176803   75  1  0   50   80    73 0.624   2.41
 4.15 Term + 177509 177649  141  1  0  114   54    78 0.979   4.93
 4.16 PlyA + 179056 179061    6                               1.05

 5.07 PlyA - 179730 179725    6                               1.05
 5.06 Term - 181227 181064  164  1  2   76   54   146 0.966   8.10
 5.05 Intr - 182246 182146  101  1  2   74   93    69 0.984   5.75
 5.04 Intr - 182529 182368  162  2  0   99  111   160 0.953  18.49
 5.03 Intr - 186250 186046  205  2  1   49   94   226 0.522  17.56
 5.02 Intr - 188362 188206  157  1  1   88   57    66 0.522   3.08
 5.01 Init - 189384 189037  348  0  0   45   85   533 0.561  43.89

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term -  93042  92777  266  1  2   41   52   214 0.801   8.77
S.002 Term - 120082 119864  219  1  0   51   51   124 0.907   2.04


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815593f:175778906_175980042|GENSCAN_predicted_peptide_1|352_aa
MGLEYPNKLESALVLQEPKGEGPVEHALAEKLEGFSEKSWWPYVVSLPLHPPGIRMLPAR
HCSAHTAASANGFISQQARWGPQTRGFVRGSRCRRRELSAAAVLALGAARGGEGRSLAAA
RNQGGGCGGARPAAAVRRCSADPIGTRCGAGAVPEMVLEREARGALCLAPEEPPAAESSR
EGERPEEAASRKLSSAGPVAGVSPPTAPAEEGGSATGSERAFYEPVGGCSSSAADEGARA
EVLARFSLPLFLDSSAEALPPAWASTRARGGRQAPFLSASNACRAAGHRAQRPPPKGRPA
PRETQASRERRRGLAAEMREDASRGGSEIKETWESSHPGSSALKFEDLGVCH

>gi568815593f:175778906_175980042|GENSCAN_predicted_CDS_1|1059_bp
atggggctggagtacccaaacaagctggagtcagctcttgtcctgcaagagcccaaaggc
gaggggcccgttgagcacgcacttgctgagaagctggagggcttctctgaaaagtcctgg
tggccttatgtcgtctccctccccctgcatcctcccggcattaggatgctgcccgcaagg
cactgcagcgcccacacggctgccagcgccaatggatttatttcccagcaggcgcgctgg
gggccccagacccgcggctttgttcgcggttcgcggtgccgccggagagagctgtccgcc
gccgcggtgctagcgttgggagcggcccgcgggggcgagggacggtccttagcagccgcg
cggaaccagggcggagggtgcggaggagcccgcccggccgccgctgtccgccgctgcagt
gctgacccgatagggacccggtgcggcgcgggagctgtccccgagatggtgctggagcga
gaagcccgaggcgccctctgcctcgccccggaagagccgccggcggctgagagctccagg
gagggggagaggccggaggaagccgcctctaggaagctctcgagcgcggggcctgtggcc
ggggtctctccgccaaccgctcccgcggaggagggcggctcagccacagggagcgagcgc
gcgttctacgaacctgttggaggctgcagctcctccgcggccgacgagggcgcccgggcc
gaggttctggcgcgtttctccctccccctcttccttgactcctccgccgaggcgctccct
cctgcctgggctagcacacgtgcacgcggggggcgccaagccccgtttctgtccgcctcg
aatgcctgccgagctgcagggcacagagcccagaggcctccccctaagggcagacccgct
cccagggagacccaagcttcccgagaaaggaggcgggggctggcggcggagatgagagag
gacgccagcagaggtggcagtgaaatcaaggagacatgggagagttcccacccaggcagt
tctgccctgaagttcgaggacttgggggtctgccactag

>gi568815593f:175778906_175980042|GENSCAN_predicted_peptide_2|198_aa
MRRAASTAQAPWPAPSQALPTTECSQHLRETGMRTPVSFSAGEPGVQKEDLGYAWGRGSQ
EPEVLETQKLASITENQRCLMAGGNQGPERQMDLPKATGSVRPKGQGLASAVSNDLELGS
ETGQAGDLKVKRRAGEREAMRASTFIVLLLRTRPTRKCLPPCSHTTTRKAEIDIPVAQRK
KLSIKEDPWFYIIHSAGK

>gi568815593f:175778906_175980042|GENSCAN_predicted_CDS_2|597_bp
atgcggagggcagccagcacagctcaggccccttggccagccccatcccaggccctgccc
accacagaatgcagccagcacctgagggagacaggaatgagaacaccagtgagcttcagt
gctggggagccaggggtccaaaaggaggacttgggctatgcgtggggcagaggcagccag
gaaccagaggtgctcgagacacagaaacttgccagcatcactgagaaccagaggtgcctc
atggctggaggaaaccaaggcccagaaaggcaaatggacttgcccaaggccacaggatca
gtgagacctaaaggccaaggtctggcctctgcagtttcaaatgacctagaacttggcagt
gaaacaggccaagcaggggacctgaaagtcaagaggagggcaggagaaagagaagccatg
agagccagcaccttcattgtgctcctactacgcaccagacccactagaaagtgtctacca
ccttgttctcacacaacaactcggaaggctgagattgacattcccgttgcacagaggaag
aaattgagcatcaaagaggatccgtggttttacatcatccactcagctgggaagtga

>gi568815593f:175778906_175980042|GENSCAN_predicted_peptide_3|228_aa
MGLAGLAECGTEQLVTGLPPPGEGLPEGDANAEKHTAERRAGDKFLMTVCEGPALTWFRL
SEPSSEHIALPLLSNSPLSMVAFFKVDLADISGGSGDEGALGQMSGDCWAKWNQTDFPCR
TSQGLCCAPVDDDFPRGEAACGISRTYLIMHLLMWNIKGVFRGSAERGPLFPDDLQLVGQ
TPDLSTLEAFCAFVFLHHEFSGVRDCTLFISVSQAASPSHLQNQGGNS

>gi568815593f:175778906_175980042|GENSCAN_predicted_CDS_3|687_bp
atgggattagcagggctggcagaatgtgggactgagcagctggtgactggtttgccacca
cctggggagggcctgcccgagggtgatgccaatgcagagaagcacacagctgagcgaagg
gcaggagacaaattcctgatgacagtgtgtgagggcccagccctcacctggttccgactc
agtgagcccagctctgaacacatcgctctgcccctgctcagcaattcacccctttctatg
gtggcatttttcaaagtggatcttgcagatattagtgggggttctggggatgagggtgcc
ctcggtcaaatgagtggggattgctgggctaaatggaatcagacagacttcccctgcagg
acttctcagggcctttgctgtgctcctgtggatgatgattttccgagaggtgaagcagca
tgtggcatttctagaacttatttgatcatgcaccttttgatgtggaacatcaagggggtg
ttccgaggaagtgcagaaagagggcccctctttccagatgacttgcagctggttggacaa
acacctgacttgagcaccctagaggccttctgtgcgtttgtgtttcttcaccacgagttc
tctggggtcagggactgtactctcttcatctctgtatcccaagcagccagcccttctcat
ctgcaaaatcagggtggcaattcctaa

>gi568815593f:175778906_175980042|GENSCAN_predicted_peptide_4|564_aa
MDFVMKQALGGATKDMGKMLGGEEEKDPDAQKKEEERQEALRQQEEERKAKHARMEAERE
KVRQQIRDKYGLKKKEEKEAEEKAALEQPCEGSLTRPKKAIPAGCGDEEEEEEESILDTV
LKYLPGPLQDMFKNPGAPPSPAPTWRDMAPAKLVPSNGSFVDFSSFVEEPQVLGPHCQAG
PSLLSQGAARPPENTWSHRVAMVYAMGNTSIGKGPGSHAWEELPERSKKAAVDRPGLGTS
DRSGSPNMDVLPSKSRSSQKVSLTAKLCRVLLQMESGSRDTIPESILQPQGLSVPHGPPP
HPPHTHTISDTPSPEPLWVPLPENAVKSHGSWGPFDAGPTLIYPRNTVSGPCSVSPGSHT
DTCHMRSQLCHDHPKRSGSSDILQNITLIQYTDVIMLIRQIDKQYLACWKPKGKVRPMDT
VPAYEGHLEKFEDESDIKWPNSKATSSEAGPWPAPQSKSAFAHIRTSMVSKLKLLCPLAS
AHQQCDIFPTKNQIYGAPVVPDSGQVVPGDSVTDAAGQRHLLLPLTIFTSRTLTATPWLG
SKLQQRPPTCPLSCTHLCSTQGLH

>gi568815593f:175778906_175980042|GENSCAN_predicted_CDS_4|1695_bp
atggacttcgtcatgaagcaggcccttggaggggccacaaaggacatggggaagatgctg
gggggagaggaggagaaggaccccgacgcgcagaaaaaggaggaggagcggcaggaggcg
ctgcggcagcaggaggaggagcgtaaggccaagcacgcgcgcatggaggcggagcgggag
aaggtccggcagcagatccgagataagtatgggctgaagaagaaggaggagaaggaagca
gaggagaaagcagccctggagcagccctgcgaggggagcctgacccggcccaagaaggcc
atccctgcgggctgcggggacgaggaggaggaggaagaggagagcatcctggacacggtg
ctcaaatacctgcccgggccgctgcaggacatgttcaagaacccaggggcacccccttcc
ccagcccccacctggagagacatggcccctgccaagctggtcccttcaaatggatccttt
gtggactttagctcatttgtggaggaaccccaggtcctgggcccccactgccaggctggg
cccagcttgctcagtcaaggggctgccaggcccccagaaaacacttggagccatcgggta
gcgatggtctatgccatggggaacacctccattgggaagggcccaggatcccatgcctgg
gaggagctgccagagagaagcaaaaaggcggctgtggatcgccctgggctgggcaccagt
gacaggtcaggatctccaaacatggacgtcctcccctccaaatccagaagctcccagaag
gtgtccttaactgcaaagctgtgcagggtactcctccagatggaatcaggaagtcgagac
accatcccagaatcaattcttcagccccaggggctgagtgttccccatggaccacccccc
caccccccgcacacacacaccatctctgacaccccttcccccgagcccctctgggtgccg
cttcctgagaatgctgtcaagtcgcacggaagctggggcccctttgatgctggacccact
ctgatataccccagaaacacggtcagtgggccatgcagtgtgtctccaggcagccacaca
gacacgtgtcacatgcgatcacagctctgtcatgaccatccaaaaagatctggatcatcg
gacatcctgcagaacatcacactgatccagtacactgatgtcatcatgctgatcaggcag
atagacaagcagtacctagcatgctggaagccaaagggaaaagtgagacccatggatact
gtcccagcgtacgaaggccatttggagaaatttgaagatgaatcagatattaaatggcct
aattccaaagccacctcctctgaagctggcccatggcctgcaccccagtccaaaagtgct
ttcgcccacatcaggacctccatggtctccaagctaaagcttctctgtcccctggcttct
gcccatcagcagtgtgacatctttcccacaaagaaccagatctatggtgccccagtggtc
cctgacagcgggcaagttgtacccggtgactctgtcactgacgctgctggtcagcgacat
ctcctactgcccctgaccatcttcacgtccaggacactgacggccacaccttggcttggc
tccaagctgcagcaacgcccccccacctgtcccctgtcctgcactcacctctgctctacc
caaggcctgcactga

>gi568815593f:175778906_175980042|GENSCAN_predicted_peptide_5|378_aa
MRAAAAPGLTAPWRLLQCCELEAGELGMAVPAAAMGPSALGQSGPGSMAPWCSVSSGPSR
YVLGMQELFRGHSKTREFLAHSAKVHSVAWSCDGRRLASGSFDKTASVFLLEKDRLVKEN
NYRGHGDSVDQLCWHPSNPDLFVTASGDKTIRIWDVRTTKCIATVNTKGENINICWSPDG
QTIAVGNKDDVVTFIDAKTHRSKAEEQFKFEVNEISWNNDNNMFFLTNGNGCINILSYPE
LKPVQSINAHPSNCICIKFDPMGKYFATGSADALVSLWDVDELVCVRCFSRLDWPVRTLS
FSHDGKMLASASEDHFIDIAEVETGDKLWEVQCESPTFTVAWHPKRPLLAFACDDKDGKY
DSSREAGTVKLFGLPNDS

>gi568815593f:175778906_175980042|GENSCAN_predicted_CDS_5|1137_bp
atgcgtgcggcagcggcgccaggactgactgcgccgtggaggctgctgcagtgttgtgag
ttggaagctggggagctcggcatggcggtccccgctgcagccatggggccctcggcgttg
ggccagagcggccccggctcgatggccccgtggtgctcagtgagcagcggcccgtcgcgc
tacgtgcttgggatgcaggagctgttccggggccacagcaagacgcgcgagttcctggcg
cacagcgccaaggtgcactcggtggcctggagttgcgacgggcgtcgcctagcctcgggg
tccttcgacaagacggccagcgtcttcttgctggagaaggaccggttggtcaaagaaaac
aattatcggggacatggggatagtgtggaccagctttgttggcatccaagtaatcctgac
ctatttgttacggcgtccggagataaaaccattcgcatctgggatgtgaggactacaaaa
tgcattgccactgtgaacactaaaggggagaacattaatatctgctggagtcctgatggg
cagaccattgctgtaggcaacaaggatgatgtggtgacctttattgatgccaagacacac
cgttccaaagcagaagagcagttcaagttcgaggtcaacgaaatctcctggaacaatgac
aataatatgttcttcctgacaaatggcaatggttgtatcaacatcctcagctacccagaa
ctgaagcctgtgcagtccatcaacgcccatccttccaactgcatctgtatcaagtttgac
cccatggggaagtactttgccacaggaagtgcagatgctttggtcagcctctgggatgtg
gatgagttagtgtgtgttcggtgcttttccaggctggattggcctgtaagaaccctcagt
ttcagccatgatgggaaaatgctggcgtcagcatcggaagatcattttattgacattgct
gaagtggagacaggggacaaactatgggaggtacagtgtgagtctccgaccttcacagtg
gcgtggcaccccaaaaggcctctgctggcatttgcctgtgatgacaaagacggcaaatat
gacagcagccgggaagccggaactgtgaagctgtttgggcttcctaatgattcttga