Result of FASTA (ccds) for pF1KB3659
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB3659, 312 aa
  1>>>pF1KB3659 312 - 312 aa - 312 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.0471+/-0.000953; mu= 16.6798+/- 0.057
 mean_var=63.5167+/-12.765, 0's: 0 Z-trim(104.6): 76  B-trim: 411 in 1/47
 Lambda= 0.160928
 statistics sampled from 7914 (7992) to 7914 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.626), E-opt: 0.2 (0.245), width:  16
 Scan time:  2.420

The best scores are:                                      opt bits E(32554)
CCDS8229.1 UCP3 gene_id:7352|Hs108|chr11           ( 312) 2073 490.1 9.2e-139
CCDS44677.1 UCP3 gene_id:7352|Hs108|chr11          ( 275) 1828 433.2 1.1e-121
CCDS8228.1 UCP2 gene_id:7351|Hs108|chr11           ( 309) 1476 351.5 4.8e-97
CCDS3753.1 UCP1 gene_id:7350|Hs108|chr4            ( 307) 1182 283.2 1.7e-76
CCDS43470.1 SLC25A27 gene_id:9481|Hs108|chr6       ( 323)  613 151.2   1e-36
CCDS76021.1 SLC25A14 gene_id:9016|Hs108|chrX       ( 290)  605 149.3 3.4e-36
CCDS14624.1 SLC25A14 gene_id:9016|Hs108|chrX       ( 322)  605 149.3 3.7e-36
CCDS14623.1 SLC25A14 gene_id:9016|Hs108|chrX       ( 325)  605 149.3 3.8e-36
CCDS31967.1 SLC25A30 gene_id:253512|Hs108|chr13    ( 291)  589 145.6 4.5e-35
CCDS11059.1 SLC25A11 gene_id:8402|Hs108|chr17      ( 314)  571 141.4 8.7e-34
CCDS66539.1 SLC25A30 gene_id:253512|Hs108|chr13    ( 240)  560 138.8 4.1e-33
CCDS11786.1 SLC25A10 gene_id:1468|Hs108|chr17      ( 287)  519 129.3 3.5e-30
CCDS59301.1 SLC25A10 gene_id:1468|Hs108|chr17      ( 296)  491 122.8 3.2e-28
CCDS54069.1 SLC25A11 gene_id:8402|Hs108|chr17      ( 263)  466 117.0 1.6e-26
CCDS162.1 SLC25A34 gene_id:284723|Hs108|chr1       ( 304)  443 111.7 7.5e-25
CCDS56431.1 SLC25A27 gene_id:9481|Hs108|chr6       ( 245)  393 100.0   2e-21
CCDS82067.1 SLC25A35 gene_id:399512|Hs108|chr17    ( 300)  387 98.7 6.1e-21
CCDS2779.1 SLC25A20 gene_id:788|Hs108|chr3         ( 301)  354 91.0 1.2e-18
CCDS76020.1 SLC25A14 gene_id:9016|Hs108|chrX       ( 353)  344 88.7   7e-18
CCDS13758.1 SLC25A1 gene_id:6576|Hs108|chr22       ( 311)  320 83.1   3e-16
CCDS11138.1 SLC25A35 gene_id:399512|Hs108|chr17    ( 295)  319 82.9 3.4e-16
CCDS786.1 SLC25A24 gene_id:29957|Hs108|chr1        ( 458)  300 78.6   1e-14
CCDS6890.1 SLC25A25 gene_id:114789|Hs108|chr9      ( 469)  300 78.6   1e-14
CCDS41361.1 SLC25A24 gene_id:29957|Hs108|chr1      ( 477)  300 78.6 1.1e-14
CCDS48031.1 SLC25A25 gene_id:114789|Hs108|chr9     ( 489)  300 78.6 1.1e-14
CCDS59146.1 SLC25A25 gene_id:114789|Hs108|chr9     ( 501)  300 78.6 1.1e-14
CCDS35151.1 SLC25A25 gene_id:114789|Hs108|chr9     ( 503)  300 78.6 1.1e-14
CCDS83420.1 SLC25A25 gene_id:114789|Hs108|chr9     ( 515)  300 78.6 1.1e-14
CCDS32882.1 SLC25A23 gene_id:79085|Hs108|chr19     ( 468)  293 77.0 3.2e-14
CCDS9959.1 SLC25A47 gene_id:283600|Hs108|chr14     ( 308)  269 71.3 1.1e-12
CCDS14005.1 SLC25A17 gene_id:10478|Hs108|chr22     ( 307)  268 71.0 1.3e-12
CCDS41671.1 SLC25A45 gene_id:283130|Hs108|chr11    ( 246)  258 68.7 5.3e-12
CCDS60850.1 SLC25A45 gene_id:283130|Hs108|chr11    ( 264)  258 68.7 5.7e-12
CCDS41670.1 SLC25A45 gene_id:283130|Hs108|chr11    ( 288)  258 68.7 6.1e-12
CCDS74817.1 SLC25A1 gene_id:6576|Hs108|chr22       ( 208)  254 67.7 8.9e-12
CCDS55913.1 SLC25A21 gene_id:89874|Hs108|chr14     ( 298)  254 67.8 1.2e-11
CCDS9663.1 SLC25A21 gene_id:89874|Hs108|chr14      ( 299)  254 67.8 1.2e-11
CCDS74176.1 SLC25A10 gene_id:1468|Hs108|chr17      ( 406)  254 67.9 1.5e-11
CCDS76431.1 SLC25A45 gene_id:283130|Hs108|chr11    ( 226)  245 65.6   4e-11


>>CCDS8229.1 UCP3 gene_id:7352|Hs108|chr11                (312 aa)
 initn: 2073 init1: 2073 opt: 2073  Z-score: 2604.7  bits: 490.1 E(32554): 9.2e-139
Smith-Waterman score: 2073; 100.0% identity (100.0% similar) in 312 aa overlap (1-312:1-312)

               10        20        30        40        50        60
pF1KB3 MVGLKPSDVPPTMAVKFLGAGTAACFADLVTFPLDTAKVRLQIQGENQAVQTARLVQYRG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 MVGLKPSDVPPTMAVKFLGAGTAACFADLVTFPLDTAKVRLQIQGENQAVQTARLVQYRG
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB3 VLGTILTMVRTEGPCSPYNGLVAGLQRQMSFASIRIGLYDSVKQVYTPKGADNSSLTTRI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 VLGTILTMVRTEGPCSPYNGLVAGLQRQMSFASIRIGLYDSVKQVYTPKGADNSSLTTRI
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB3 LAGCTTGAMAVTCAQPTDVVKVRFQASIHLGPSRSDRKYSGTMDAYRTIAREEGVRGLWK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 LAGCTTGAMAVTCAQPTDVVKVRFQASIHLGPSRSDRKYSGTMDAYRTIAREEGVRGLWK
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB3 GTLPNIMRNAIVNCAEVVTYDILKEKLLDYHLLTDNFPCHFVSAFGAGFCATVVASPVDV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 GTLPNIMRNAIVNCAEVVTYDILKEKLLDYHLLTDNFPCHFVSAFGAGFCATVVASPVDV
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB3 VKTRYMNSPPGQYFSPLDCMIKMVAQEGPTAFYKGFTPSFLRLGSWNVVMFVTYEQLKRA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 VKTRYMNSPPGQYFSPLDCMIKMVAQEGPTAFYKGFTPSFLRLGSWNVVMFVTYEQLKRA
              250       260       270       280       290       300

              310  
pF1KB3 LMKVQMLRESPF
       ::::::::::::
CCDS82 LMKVQMLRESPF
              310  

>>CCDS44677.1 UCP3 gene_id:7352|Hs108|chr11               (275 aa)
 initn: 1828 init1: 1828 opt: 1828  Z-score: 2298.1  bits: 433.2 E(32554): 1.1e-121
Smith-Waterman score: 1828; 100.0% identity (100.0% similar) in 275 aa overlap (1-275:1-275)

               10        20        30        40        50        60
pF1KB3 MVGLKPSDVPPTMAVKFLGAGTAACFADLVTFPLDTAKVRLQIQGENQAVQTARLVQYRG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 MVGLKPSDVPPTMAVKFLGAGTAACFADLVTFPLDTAKVRLQIQGENQAVQTARLVQYRG
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB3 VLGTILTMVRTEGPCSPYNGLVAGLQRQMSFASIRIGLYDSVKQVYTPKGADNSSLTTRI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 VLGTILTMVRTEGPCSPYNGLVAGLQRQMSFASIRIGLYDSVKQVYTPKGADNSSLTTRI
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB3 LAGCTTGAMAVTCAQPTDVVKVRFQASIHLGPSRSDRKYSGTMDAYRTIAREEGVRGLWK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 LAGCTTGAMAVTCAQPTDVVKVRFQASIHLGPSRSDRKYSGTMDAYRTIAREEGVRGLWK
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB3 GTLPNIMRNAIVNCAEVVTYDILKEKLLDYHLLTDNFPCHFVSAFGAGFCATVVASPVDV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 GTLPNIMRNAIVNCAEVVTYDILKEKLLDYHLLTDNFPCHFVSAFGAGFCATVVASPVDV
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB3 VKTRYMNSPPGQYFSPLDCMIKMVAQEGPTAFYKGFTPSFLRLGSWNVVMFVTYEQLKRA
       :::::::::::::::::::::::::::::::::::                         
CCDS44 VKTRYMNSPPGQYFSPLDCMIKMVAQEGPTAFYKG                         
              250       260       270                              

              310  
pF1KB3 LMKVQMLRESPF

>>CCDS8228.1 UCP2 gene_id:7351|Hs108|chr11                (309 aa)
 initn: 1412 init1: 778 opt: 1476  Z-score: 1855.7  bits: 351.5 E(32554): 4.8e-97
Smith-Waterman score: 1476; 72.2% identity (87.5% similar) in 313 aa overlap (1-312:1-309)

               10        20        30        40         50         
pF1KB3 MVGLKPSDVPPTMAVKFLGAGTAACFADLVTFPLDTAKVRLQIQGENQA-VQTARLVQYR
       :::.: .::::: .:::::::::::.:::.::::::::::::::::.:. :...  .:::
CCDS82 MVGFKATDVPPTATVKFLGAGTAACIADLITFPLDTAKVRLQIQGESQGPVRATASAQYR
               10        20        30        40        50        60

      60        70        80        90       100       110         
pF1KB3 GVLGTILTMVRTEGPCSPYNGLVAGLQRQMSFASIRIGLYDSVKQVYTPKGADNSSLTTR
       ::.:::::::::::: : ::::::::::::::::.:::::::::: :: ::....:. .:
CCDS82 GVMGTILTMVRTEGPRSLYNGLVAGLQRQMSFASVRIGLYDSVKQFYT-KGSEHASIGSR
               70        80        90       100        110         

     120       130       140       150       160       170         
pF1KB3 ILAGCTTGAMAVTCAQPTDVVKVRFQASIHLGPSRSDRKYSGTMDAYRTIAREEGVRGLW
       .::: ::::.::. :::::::::::::. . :   . :.:..:..::.::::::: ::::
CCDS82 LLAGSTTGALAVAVAQPTDVVKVRFQAQARAG---GGRRYQSTVNAYKTIAREEGFRGLW
     120       130       140       150          160       170      

     180       190       200       210       220       230         
pF1KB3 KGTLPNIMRNAIVNCAEVVTYDILKEKLLDYHLLTDNFPCHFVSAFGAGFCATVVASPVD
       ::: ::. :::::::::.::::..:. ::  .:.::..::::.::::::::.::.:::::
CCDS82 KGTSPNVARNAIVNCAELVTYDLIKDALLKANLMTDDLPCHFTSAFGAGFCTTVIASPVD
        180       190       200       210       220       230      

     240       250       260       270       280       290         
pF1KB3 VVKTRYMNSPPGQYFSPLDCMIKMVAQEGPTAFYKGFTPSFLRLGSWNVVMFVTYEQLKR
       :::::::::  ::: :   : . :. .::: :::::: ::::::::::::::::::::::
CCDS82 VVKTRYMNSALGQYSSAGHCALTMLQKEGPRAFYKGFMPSFLRLGSWNVVMFVTYEQLKR
        240       250       260       270       280       290      

     300       310  
pF1KB3 ALMKVQMLRESPF
       ::: .   ::.::
CCDS82 ALMAACTSREAPF
        300         

>>CCDS3753.1 UCP1 gene_id:7350|Hs108|chr4                 (307 aa)
 initn: 1257 init1: 662 opt: 1182  Z-score: 1486.9  bits: 283.2 E(32554): 1.7e-76
Smith-Waterman score: 1182; 58.7% identity (81.8% similar) in 303 aa overlap (1-303:1-298)

               10        20        30        40        50        60
pF1KB3 MVGLKPSDVPPTMAVKFLGAGTAACFADLVTFPLDTAKVRLQIQGENQAVQTARLVQYRG
       : ::  ::: ::..:....:: :::.::..::::::::::::.:::     :. ...:.:
CCDS37 MGGLTASDVHPTLGVQLFSAGIAACLADVITFPLDTAKVRLQVQGE---CPTSSVIRYKG
               10        20        30        40           50       

               70        80        90       100       110       120
pF1KB3 VLGTILTMVRTEGPCSPYNGLVAGLQRQMSFASIRIGLYDSVKQVYTPKGADNSSLTTRI
       ::::: ..:.:::  . :.:: ::::::.: ::.::::::.:..  :       :: ..:
CCDS37 VLGTITAVVKTEGRMKLYSGLPAGLQRQISSASLRIGLYDTVQEFLTAGKETAPSLGSKI
        60        70        80        90       100       110       

              130       140       150       160       170       180
pF1KB3 LAGCTTGAMAVTCAQPTDVVKVRFQASIHLGPSRSDRKYSGTMDAYRTIAREEGVRGLWK
       ::: :::..::  .:::.:::::.::. ::   .   .:.::..::: ::  ::. ::::
CCDS37 LAGLTTGGVAVFIGQPTEVVKVRLQAQSHLHGIKP--RYTGTYNAYRIIATTEGLTGLWK
       120       130       140       150         160       170     

              190       200       210       220       230       240
pF1KB3 GTLPNIMRNAIVNCAEVVTYDILKEKLLDYHLLTDNFPCHFVSAFGAGFCATVVASPVDV
       :: ::.::..:.::.:.::::..:: ..  ..:.:. :::.:::. ::::::...:::::
CCDS37 GTTPNLMRSVIINCTELVTYDLMKEAFVKNNILADDVPCHLVSALIAGFCATAMSSPVDV
         180       190       200       210       220       230     

              250       260       270       280       290       300
pF1KB3 VKTRYMNSPPGQYFSPLDCMIKMVAQEGPTAFYKGFTPSFLRLGSWNVVMFVTYEQLKRA
       ::::..::::::: :  .: .:. ..::::::.::..:::::::::::.::: .::::: 
CCDS37 VKTRFINSPPGQYKSVPNCAMKVFTNEGPTAFFKGLVPSFLRLGSWNVIMFVCFEQLKRE
         240       250       260       270       280       290     

              310  
pF1KB3 LMKVQMLRESPF
       : :         
CCDS37 LSKSRQTMDCAT
         300       

>>CCDS43470.1 SLC25A27 gene_id:9481|Hs108|chr6            (323 aa)
 initn: 570 init1: 285 opt: 613  Z-score: 772.6  bits: 151.2 E(32554): 1e-36
Smith-Waterman score: 613; 35.5% identity (65.2% similar) in 310 aa overlap (14-312:20-323)

                     10        20        30        40        50    
pF1KB3       MVGLKPSDVPPTMAVKFLGAGTAACFADLVTFPLDTAKVRLQIQGENQAVQT--
                          : ::: .: ::  :.:.::::: .:.:::.:::   ..   
CCDS43 MSVPEEEERLLPLTQRWPRASKFLLSGCAATVAELATFPLDLTKTRLQMQGEAALARLGD
               10        20        30        40        50        60

               60        70        80        90       100       110
pF1KB3 -ARL-VQYRGVLGTILTMVRTEGPCSPYNGLVAGLQRQMSFASIRIGLYDSVKQVYTPKG
        ::  . :::.. : : ... ::  . ..:.. .. :.. ... :.  :. ...:   :.
CCDS43 GARESAPYRGMVRTALGIIEEEGFLKLWQGVTPAIYRHVVYSGGRMVTYEHLREVVFGKS
               70        80        90       100       110       120

               120       130       140       150       160         
pF1KB3 ADNS-SLTTRILAGCTTGAMAVTCAQPTDVVKVRFQASIHLGPSRSDRKYSGTMDAYRTI
        :.   :   ...:  .:...   :.:::.:::..:   .     .  .. :.  :.  :
CCDS43 EDEHYPLWKSVIGGMMAGVIGQFLANPTDLVKVQMQMEGKRKLEGKPLRFRGVHHAFAKI
              130       140       150       160       170       180

     170       180       190       200       210       220         
pF1KB3 AREEGVRGLWKGTLPNIMRNAIVNCAEVVTYDILKEKLLDYHLLTDNFPCHFVSAFGAGF
         : :.:::: : .:::.: :.:: ....::: .:. :.    : ::.  : .:.. .:.
CCDS43 LAEGGIRGLWAGWVPNIQRAALVNMGDLTTYDTVKHYLVLNTPLEDNIMTHGLSSLCSGL
              190       200       210       220       230       240

     230       240       250             260       270       280   
pF1KB3 CATVVASPVDVVKTRYMNSPPGQ------YFSPLDCMIKMVAQEGPTAFYKGFTPSFLRL
        :.....:.::.:.: ::.:  .      : :  ::.:. :  ::  ..:::: ::.::.
CCDS43 VASILGTPADVIKSRIMNQPRDKQGRGLLYKSSTDCLIQAVQGEGFMSLYKGFLPSWLRM
              250       260       270       280       290       300

           290       300       310  
pF1KB3 GSWNVVMFVTYEQLKRALMKVQMLRESPF
         :..:...:::...      .:   :::
CCDS43 TPWSMVFWLTYEKIR------EMSGVSPF
              310             320   

>>CCDS76021.1 SLC25A14 gene_id:9016|Hs108|chrX            (290 aa)
 initn: 667 init1: 235 opt: 605  Z-score: 763.2  bits: 149.3 E(32554): 3.4e-36
Smith-Waterman score: 676; 38.8% identity (73.2% similar) in 291 aa overlap (17-299:9-287)

               10        20        30        40        50          
pF1KB3 MVGLKPSDVPPTMAVKFLGAGTAACFADLVTFPLDTAKVRLQIQGENQAVQTARL--VQY
                       :. .: :.  :.. :::.: .:.:::.::  :... ::.  ..:
CCDS76         MSGLNWKPFVYGGLASIVAEFGTFPVDLTKTRLQVQG--QSID-ARFKEIKY
                       10        20        30          40          

       60        70        80        90       100       110        
pF1KB3 RGVLGTILTMVRTEGPCSPYNGLVAGLQRQMSFASIRIGLYDSVKQVYTPKGADNSSLTT
       ::.. ... . . ::  . :.:.. .: :: :...:.::.:.:.:.... .  :.. :  
CCDS76 RGMFHALFRICKEEGVLALYSGIAPALLRQASYGTIKIGIYQSLKRLFVERLEDET-LLI
      50        60        70        80        90       100         

      120       130       140       150       160        170       
pF1KB3 RILAGCTTGAMAVTCAQPTDVVKVRFQASIHLGPSRSDRKYSGTM-DAYRTIAREEGVRG
        .. : ..:... : :.::::.:.:.::.  :        ..:.:  ..  : ..::.::
CCDS76 NMICGVVSGVISSTIANPTDVLKIRMQAQGSL--------FQGSMIGSFIDIYQQEGTRG
      110       120       130       140               150       160

       180       190       200       210       220       230       
pF1KB3 LWKGTLPNIMRNAIVNCAEVVTYDILKEKLLDYHLLTDNFPCHFVSAFGAGFCATVVASP
       ::.:..:. .: :::  .:. .::: :..:.   .. :..  ::::.:  :. ......:
CCDS76 LWRGVVPTAQRAAIVVGVELPVYDITKKHLILSGMMGDTILTHFVSSFTCGLAGALASNP
              170       180       190       200       210       220

       240       250            260       270       280       290  
pF1KB3 VDVVKTRYMNSPP--GQ---YFSPLDCMIKMVAQEGPTAFYKGFTPSFLRLGSWNVVMFV
       ::::.::.::.    :.   : . .: ..::  .::  :.:::: :..:::: ::...:.
CCDS76 VDVVRTRMMNQRAIVGHVDLYKGTVDGILKMWKHEGFFALYKGFWPNWLRLGPWNIIFFI
              230       240       250       260       270       280

            300       310  
pF1KB3 TYEQLKRALMKVQMLRESPF
       :::::::             
CCDS76 TYEQLKRLQI          
              290          

>>CCDS14624.1 SLC25A14 gene_id:9016|Hs108|chrX            (322 aa)
 initn: 667 init1: 235 opt: 605  Z-score: 762.6  bits: 149.3 E(32554): 3.7e-36
Smith-Waterman score: 676; 38.8% identity (73.2% similar) in 291 aa overlap (17-299:41-319)

                             10        20        30        40      
pF1KB3               MVGLKPSDVPPTMAVKFLGAGTAACFADLVTFPLDTAKVRLQIQGE
                                     :. .: :.  :.. :::.: .:.:::.:: 
CCDS14 FLRVKFATAAVIHQKSTTVSHEMSGLNWKPFVYGGLASIVAEFGTFPVDLTKTRLQVQG-
               20        30        40        50        60          

         50          60        70        80        90       100    
pF1KB3 NQAVQTARL--VQYRGVLGTILTMVRTEGPCSPYNGLVAGLQRQMSFASIRIGLYDSVKQ
        :... ::.  ..:::.. ... . . ::  . :.:.. .: :: :...:.::.:.:.:.
CCDS14 -QSID-ARFKEIKYRGMFHALFRICKEEGVLALYSGIAPALLRQASYGTIKIGIYQSLKR
       70         80        90       100       110       120       

          110       120       130       140       150       160    
pF1KB3 VYTPKGADNSSLTTRILAGCTTGAMAVTCAQPTDVVKVRFQASIHLGPSRSDRKYSGTM-
       ... .  :.. :   .. : ..:... : :.::::.:.:.::.  :        ..:.: 
CCDS14 LFVERLEDET-LLINMICGVVSGVISSTIANPTDVLKIRMQAQGSL--------FQGSMI
       130        140       150       160       170                

           170       180       190       200       210       220   
pF1KB3 DAYRTIAREEGVRGLWKGTLPNIMRNAIVNCAEVVTYDILKEKLLDYHLLTDNFPCHFVS
        ..  : ..::.::::.:..:. .: :::  .:. .::: :..:.   .. :..  ::::
CCDS14 GSFIDIYQQEGTRGLWRGVVPTAQRAAIVVGVELPVYDITKKHLILSGMMGDTILTHFVS
      180       190       200       210       220       230        

           230       240       250            260       270        
pF1KB3 AFGAGFCATVVASPVDVVKTRYMNSPP--GQ---YFSPLDCMIKMVAQEGPTAFYKGFTP
       .:  :. ......:::::.::.::.    :.   : . .: ..::  .::  :.:::: :
CCDS14 SFTCGLAGALASNPVDVVRTRMMNQRAIVGHVDLYKGTVDGILKMWKHEGFFALYKGFWP
      240       250       260       270       280       290        

      280       290       300       310  
pF1KB3 SFLRLGSWNVVMFVTYEQLKRALMKVQMLRESPF
       ..:::: ::...:.:::::::             
CCDS14 NWLRLGPWNIIFFITYEQLKRLQI          
      300       310       320            

>>CCDS14623.1 SLC25A14 gene_id:9016|Hs108|chrX            (325 aa)
 initn: 667 init1: 235 opt: 605  Z-score: 762.5  bits: 149.3 E(32554): 3.8e-36
Smith-Waterman score: 676; 38.8% identity (73.2% similar) in 291 aa overlap (17-299:44-322)

                             10        20        30        40      
pF1KB3               MVGLKPSDVPPTMAVKFLGAGTAACFADLVTFPLDTAKVRLQIQGE
                                     :. .: :.  :.. :::.: .:.:::.:: 
CCDS14 VKFATAAVIVSGHQKSTTVSHEMSGLNWKPFVYGGLASIVAEFGTFPVDLTKTRLQVQG-
            20        30        40        50        60        70   

         50          60        70        80        90       100    
pF1KB3 NQAVQTARL--VQYRGVLGTILTMVRTEGPCSPYNGLVAGLQRQMSFASIRIGLYDSVKQ
        :... ::.  ..:::.. ... . . ::  . :.:.. .: :: :...:.::.:.:.:.
CCDS14 -QSID-ARFKEIKYRGMFHALFRICKEEGVLALYSGIAPALLRQASYGTIKIGIYQSLKR
               80        90       100       110       120       130

          110       120       130       140       150       160    
pF1KB3 VYTPKGADNSSLTTRILAGCTTGAMAVTCAQPTDVVKVRFQASIHLGPSRSDRKYSGTM-
       ... .  :.. :   .. : ..:... : :.::::.:.:.::.  :        ..:.: 
CCDS14 LFVERLEDET-LLINMICGVVSGVISSTIANPTDVLKIRMQAQGSL--------FQGSMI
              140        150       160       170               180 

           170       180       190       200       210       220   
pF1KB3 DAYRTIAREEGVRGLWKGTLPNIMRNAIVNCAEVVTYDILKEKLLDYHLLTDNFPCHFVS
        ..  : ..::.::::.:..:. .: :::  .:. .::: :..:.   .. :..  ::::
CCDS14 GSFIDIYQQEGTRGLWRGVVPTAQRAAIVVGVELPVYDITKKHLILSGMMGDTILTHFVS
             190       200       210       220       230       240 

           230       240       250            260       270        
pF1KB3 AFGAGFCATVVASPVDVVKTRYMNSPP--GQ---YFSPLDCMIKMVAQEGPTAFYKGFTP
       .:  :. ......:::::.::.::.    :.   : . .: ..::  .::  :.:::: :
CCDS14 SFTCGLAGALASNPVDVVRTRMMNQRAIVGHVDLYKGTVDGILKMWKHEGFFALYKGFWP
             250       260       270       280       290       300 

      280       290       300       310  
pF1KB3 SFLRLGSWNVVMFVTYEQLKRALMKVQMLRESPF
       ..:::: ::...:.:::::::             
CCDS14 NWLRLGPWNIIFFITYEQLKRLQI          
             310       320               

>>CCDS31967.1 SLC25A30 gene_id:253512|Hs108|chr13         (291 aa)
 initn: 586 init1: 227 opt: 589  Z-score: 743.1  bits: 145.6 E(32554): 4.5e-35
Smith-Waterman score: 669; 38.4% identity (70.6% similar) in 289 aa overlap (17-299:9-288)

               10        20        30        40        50        60
pF1KB3 MVGLKPSDVPPTMAVKFLGAGTAACFADLVTFPLDTAKVRLQIQGENQAVQTARLVQYRG
                       :. .: :.  :.  :::.: .:.::::::... ..  . ..:::
CCDS31         MSALNWKPFVYGGLASITAECGTFPIDLTKTRLQIQGQTNDAKF-KEIRYRG
                       10        20        30        40         50 

               70        80        90       100       110       120
pF1KB3 VLGTILTMVRTEGPCSPYNGLVAGLQRQMSFASIRIGLYDSVKQVYTPKGADNSSLTTRI
       .: ... . : ::  . :.:.. .. :: :...:.:: :.:.:...  .  :.. :   .
CCDS31 MLHALVRIGREEGLKALYSGIAPAMLRQASYGTIKIGTYQSLKRLFIERPEDET-LPINV
              60        70        80        90       100        110

              130       140       150       160       170       180
pF1KB3 LAGCTTGAMAVTCAQPTDVVKVRFQASIHLGPSRSDRKYSGTMDAYRTIAREEGVRGLWK
       . :  .:... : :.::::.:.:.::       .:.   .: .  . .: ..::.:::::
CCDS31 ICGILSGVISSTIANPTDVLKIRMQA-------QSNTIQGGMIGNFMNIYQQEGTRGLWK
              120       130              140       150       160   

              190       200       210       220       230       240
pF1KB3 GTLPNIMRNAIVNCAEVVTYDILKEKLLDYHLLTDNFPCHFVSAFGAGFCATVVASPVDV
       :.  . .: :::  .:. .::: :..:.   :. :.   ::.:.:  :. ......::::
CCDS31 GVSLTAQRAAIVVGVELPVYDITKKHLILSGLMGDTVYTHFLSSFTCGLAGALASNPVDV
           170       180       190       200       210       220   

                 250          260       270       280       290    
pF1KB3 VKTRYMNSP---PGQ---YFSPLDCMIKMVAQEGPTAFYKGFTPSFLRLGSWNVVMFVTY
       :.::.::.     :.   : . :::...   .::  :.:::: :..:::: ::...::::
CCDS31 VRTRMMNQRVLRDGRCSGYTGTLDCLLQTWKNEGFFALYKGFWPNWLRLGPWNIIFFVTY
           230       240       250       260       270       280   

          300       310  
pF1KB3 EQLKRALMKVQMLRESPF
       ::::.             
CCDS31 EQLKKLDL          
           290           

>>CCDS11059.1 SLC25A11 gene_id:8402|Hs108|chr17           (314 aa)
 initn: 505 init1: 226 opt: 571  Z-score: 720.1  bits: 141.4 E(32554): 8.7e-34
Smith-Waterman score: 571; 33.7% identity (66.7% similar) in 306 aa overlap (5-304:15-310)

                         10        20        30        40        50
pF1KB3           MVGLKPSDVPPTMAVKFLGAGTAACFADLVTFPLDTAKVRLQIQGENQAV
                     ::   : .  :::: .: :.  : . . ::: .: :.:..::.   
CCDS11 MAATASAGAGGIDGKPRTSPKS--VKFLFGGLAGMGATVFVQPLDLVKNRMQLSGEG---
               10        20          30        40        50        

               60        70        80        90       100       110
pF1KB3 QTARLVQYRGVLGTILTMVRTEGPCSPYNGLVAGLQRQMSFASIRIGLYDSVKQVYTPKG
         :.  .:.  . .. .....::  . :.:: ::: :: .... :.:.:  . .  :  :
CCDS11 --AKTREYKTSFHALTSILKAEGLRGIYTGLSAGLLRQATYTTTRLGIYTVLFERLT--G
            60        70        80        90       100       110   

                120       130       140       150       160        
pF1KB3 ADNS--SLTTRILAGCTTGAMAVTCAQPTDVVKVRFQASIHLGPSRSDRKYSGTMDAYRT
       ::..  ..  . . : :.:: ..  . :..:. .:. :. .: :. . : :.....:   
CCDS11 ADGTPPGFLLKAVIGMTAGATGAFVGTPAEVALIRMTADGRL-PADQRRGYKNVFNALIR
             120       130       140       150        160       170

      170       180       190       200       210       220        
pF1KB3 IAREEGVRGLWKGTLPNIMRNAIVNCAEVVTYDILKEKLLDYHLLTDNFPCHFVSAFGAG
       :.:::::  ::.: .:.. : ..:: :....:.  :. :::   ..::. ::: ... .:
CCDS11 ITREEGVLTLWRGCIPTMARAVVVNAAQLASYSQSKQFLLDSGYFSDNILCHFCASMISG
              180       190       200       210       220       230

      230       240           250       260       270       280    
pF1KB3 FCATVVASPVDVVKTRYMN----SPPGQYFSPLDCMIKMVAQEGPTAFYKGFTPSFLRLG
       . .:... :::..::: .:    .   .: . :: ..:.:  ::  ...::::: . :::
CCDS11 LVTTAASMPVDIAKTRIQNMRMIDGKPEYKNGLDVLFKVVRYEGFFSLWKGFTPYYARLG
              240       250       260       270       280       290

          290       300       310  
pF1KB3 SWNVVMFVTYEQLKRALMKVQMLRESPF
         .:. :.  ::...:  ..        
CCDS11 PHTVLTFIFLEQMNKAYKRLFLSG    
              300       310        




312 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sat Nov  5 05:18:27 2016 done: Sat Nov  5 05:18:28 2016
 Total Scan time:  2.420 Total Display time:  0.040

Function used was FASTA [36.3.4 Apr, 2011]
Inquiries or Suggestions ?
Send a message to flexiclone AT kazusagt.com