GENSCAN 1.0	Date run:  5-Nov-116	Time: 23:53:25

Sequence gi568815595r:81390410_81861517 : 471108 bp : 35.92% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   1201   1386  186  0  0  109   75   117 0.571  11.61
 1.02 Term +   1929   2078  150  2  0   49   43   126 0.484   1.13
 1.03 PlyA +   2432   2437    6                               1.05

 2.03 PlyA -   2736   2731    6                               1.05
 2.02 Term -   2894   2864   31  1  1  119   48     8 0.085  -3.75
 2.01 Init -   5654   5491  164  2  2   46   67   182 0.153  11.34
 2.00 Prom -  12654  12615   40                              -3.65

 3.05 PlyA -  13360  13355    6                               1.05
 3.04 Term -  27519  27314  206  1  2  102   53    86 0.490   3.05
 3.03 Intr -  28147  28074   74  0  2   49   77    56 0.419  -1.27
 3.02 Intr -  38175  38069  107  0  2   92   87   101 0.621   8.49
 3.01 Init -  51166  51053  114  1  0   90   35   128 0.796   7.96
 3.00 Prom -  57827  57788   40                              -5.05

 4.10 PlyA -  58866  58861    6                               1.05
 4.09 Term -  60850  60703  148  0  1   68   38   104 0.436  -0.21
 4.08 Intr -  61444  61324  121  2  1   90   82    61 0.295   4.33
 4.07 Intr -  61975  61844  132  2  0  110   84   -11 0.223   0.40
 4.06 Intr -  70413  70281  133  0  1   79   72    22 0.085  -1.00
 4.05 Intr -  85658  85546  113  0  2   39  103    94 0.126   5.18
 4.04 Intr -  87094  87011   84  2  0  108   93    13 0.144   2.67
 4.03 Intr - 108879 108697  183  1  0   73   97    56 0.091   3.84
 4.02 Intr - 120315 120282   34  0  1  105   80    37 0.040   1.48
 4.01 Init - 135381 135202  180  0  0   70   41   135 0.716   6.23
 4.00 Prom - 141907 141868   40                              -6.75

 5.09 PlyA - 142614 142609    6                               1.05
 5.08 Term - 144916 144764  153  1  0   76   42   115 0.950   2.64
 5.07 Intr - 146686 146502  185  2  2   82  115   100 0.972  10.69
 5.06 Intr - 187687 187516  172  1  1   91  106   204 0.859  21.09
 5.05 Intr - 190866 190756  111  0  0   81   99   116 0.992  11.66
 5.04 Intr - 195781 195683   99  1  0   95  110    74 0.864   9.69
 5.03 Intr - 200755 200628  128  2  2   73   88   103 0.966   8.28
 5.02 Intr - 203578 203499   80  0  2   -6   69   130 0.333  -0.02
 5.01 Init - 210981 210947   35  0  2   73   78    32 0.544   0.09
 5.00 Prom - 215874 215835   40                              -6.85

 6.00 Prom + 215896 215935   40                              -6.75
 6.01 Init + 220183 220288  106  0  1   59   39    98 0.777   2.43
 6.02 Term + 222426 222670  245  1  2   82   38   535 0.998  42.98
 6.03 PlyA + 223301 223306    6                               1.05

 7.10 PlyA - 223416 223411    6                               1.05
 7.09 Term - 241711 241600  112  0  1   69   55   108 0.919   2.65
 7.08 Intr - 252581 252372  210  1  0   58   96   158 0.968  10.71
 7.07 Intr - 256073 255983   91  0  1   45   98    95 0.898   4.33
 7.06 Intr - 258582 258447  136  0  1   62  111    34 0.861   2.32
 7.05 Intr - 259512 259387  126  0  0   90   78    70 0.857   6.16
 7.04 Intr - 280544 280429  116  0  2   97   75    45 0.002   3.35
 7.03 Intr - 305944 305834  111  2  0  116   68    37 0.208   3.93
 7.02 Intr - 315204 315035  170  2  2   93   83   156 0.906  14.27
 7.01 Init - 371108 370966  143  2  2   74   86   283 0.675  26.35
 7.00 Prom - 383023 382984   40                              -4.95

 8.02 PlyA - 385238 385233    6                               1.05
 8.01 Sngl - 390582 390133  450  0  0   66   48   244 0.289  14.17
 8.00 Prom - 406336 406297   40                              -2.75

 9.03 PlyA - 407101 407096    6                               1.05
 9.02 Term - 421028 420706  323  0  2   17   42   278 0.523  10.10
 9.01 Init - 421715 421511  205  2  1   97   44   136 0.740   7.16

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl + 167035 167205  171  0  0   60   41   188 0.816   5.88


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815595r:81390410_81861517|GENSCAN_predicted_peptide_1|111_aa
MAEGETHILHGSRQERKMRAERKGKPLIKASDLMRLIYYHEESMGQTVPVIQLSPTRSLQ
QQTRGIISVSSQVMPESIRDFLHDLDIKAPRQDDVKALRFQRRGHKPLDKM

>gi568815595r:81390410_81861517|GENSCAN_predicted_CDS_1|336_bp
atggcggaaggcgaaactcacatcttacacggcagcaggcaagagagaaaaatgagagcc
gagcgaaaagggaaaccccttataaaagcatcagatctcatgagacttatttactaccat
gaggagagtatggggcaaaccgtccccgtgattcaattatctcccaccaggtccctccaa
caacagacacgaggaatcatttctgtcagttctcaggttatgcctgaatctatccgggat
tttcttcatgaccttgacattaaagctcccagacaggatgatgtcaaggccctaagattc
cagcgaagaggacacaaaccactggataagatgtag

>gi568815595r:81390410_81861517|GENSCAN_predicted_peptide_2|64_aa
MVSRRRLFCDWRSSDLWLLLAQCPGLLPPSVLKRFCQHKRPEHQTVPETLKVNQMFLGIS
RNCI

>gi568815595r:81390410_81861517|GENSCAN_predicted_CDS_2|195_bp
atggtttccagacggagactcttctgtgactggcggtcatctgacctgtggctgcttctg
gcccagtgccctggtctgctcccaccatctgtcttgaaaaggttctgccagcataagcgg
cctgaacaccagactgtgcctgagactctgaaagtgaatcagatgtttttgggaatcagt
agaaactgtatttga

>gi568815595r:81390410_81861517|GENSCAN_predicted_peptide_3|166_aa
MVPASAPGEGLRKLTIMVQGEGEPASHMTRSSKREREEKLQGSIYIKGTSSTTTLTKNET
LQLRLSTCVENVELVIVLAARQTRCAVAAIIHALSRGGGTSYIWNRLKNSNKVEKIAQSL
CSSVFGDYVNHGYPRLCVHYTLFTAANDSNHFILTVPRSYDEESWL

>gi568815595r:81390410_81861517|GENSCAN_predicted_CDS_3|501_bp
atggtgccagcatctgctcctggtgaaggcctcaggaagcttacaatcatggtgcaaggt
gaaggcgagccagccagtcacatgacgagaagcagcaagagagaaagggaggagaaactt
cagggctctatttacatcaaagggacatcaagtaccacaacgctcactaaaaatgaaacc
ctacagctcagactgtcaacttgtgtggagaatgtagagctggtgattgttttggcagca
agacagacaagatgtgcggttgctgccattattcatgctttgtcaagaggaggtgggacc
tcttatatctggaatcgacttaaaaacagtaataaggttgagaagatagctcaatctctg
tgctcatcagtgtttggggactacgtgaaccatggctacccgaggctgtgtgttcattat
acactattcacagccgctaatgatagcaaccattttatattaacagtaccaagatcttat
gatgaggagagctggttgtga

>gi568815595r:81390410_81861517|GENSCAN_predicted_peptide_4|375_aa
MDKFLDTYTLPRLNQEEVESLNRPITGSEIEAIINSLPTKKSPGPDGFTAEFYQRYKDKL
VFGEQVVFGYMTRILQCLIQLLNCCEFLKSCTFKIVLDSDAAEYGGHQRLDHSTDFFSEA
FEHNGRPYSLLVILVLIAFLSFFSKSLGLSSFTFIRLCMPVHEANPYGNTQHADKISISI
SGDSGTRATNENAVYKEVKMFLFQPFALLIIVLNRDVRLKAFPFQKFKCGASPTSLVGIF
RKDEPYSKPTGPGLDLQSTPHILNPNLLKSCLNDSRSHHNFLQEDFLCQAMKQALKGRKF
FRLHYGAFKGNTILNEKMSLLKLLAPSWLFQIENVEEEEDLFLVGGTCCLRQSCKQYKDV
VAFRGDLEGDRTYLL

>gi568815595r:81390410_81861517|GENSCAN_predicted_CDS_4|1128_bp
atggataaattcctcgacacatacactctcccaagactaaaccaggaagaagttgaatct
ctgaatagaccaataacaggctctgaaattgaggcaataattaatagcttaccaaccaaa
aaaagtccaggaccagatggattcacagccgaattctaccagaggtacaaggacaagctg
gtttttggggaacaggtggtgtttggttacatgacacgtattttacaatgtctcattcaa
ctcctcaactgttgtgaattccttaagagctgtacattcaaaattgtgctagattcagat
gcagcggaatatggagggcatcagagactggaccacagcactgactttttttctgaggct
tttgaacataatgggcgtccctattctcttttggtaatccttgtgctcatcgctttcttg
tcattcttttccaagtcacttggactctccagcttcactttcattaggctctgtatgcca
gtgcatgaggctaatccatatggaaacacccagcatgctgataaaatttcaatctccatc
tcaggagattcgggaactagagctacaaatgaaaatgccgtgtacaaagaagtgaaaatg
tttctattccagccatttgctttattaatcattgtgctgaatagagatgttaggttgaaa
gcctttccatttcagaaatttaaatgtggtgcttcaccaacttctctagtaggaattttc
cggaaggatgaaccttattctaagccaactggcccaggccttgatcttcaaagcacacct
catattttaaacccaaacttactaaaatcctgtctaaatgatagtagaagtcaccataat
tttctgcaggaagacttcttgtgtcaggctatgaaacaagctcttaaaggaaggaagttt
ttcaggctacattatggtgcttttaaagggaatacaattcttaatgagaaaatgagtctc
ctgaagctcctggctccaagctggctcttccaaattgagaatgtggaggaggaagaggat
ctttttctagttggtgggacttgttgcttgagacaaagctgtaagcagtacaaagacgtg
gtagcttttagaggagacctggagggtgacagaacttacctgttatga

>gi568815595r:81390410_81861517|GENSCAN_predicted_peptide_5|320_aa
MLNVEYKIAVKRWWLEEYRFDGFRFDGVTSMLYHHHGVGQGFSGDYSEYFGLQVDEDALT
YLMLANHLVHTLCPDSITIAEDVSGMPALCSPISQGGGGFDYRLAMAIPDKWIQLLKEFK
DEDWNMGDIVYTLTNRRYLEKCIAYAESHDQALVGDKSLAFWLMDAEMYTNMSVLTPFTP
VIDRGIQLHKMIRLITHGLGGEGYLNFMGNEFGHPEWLDFPRKGNNESYHYARRQFHLTD
DDLLRYKFLNNFDRDMNRLEERYGWLAAPQAYVSEKHEGNKIIAFERAGLLFIFNFHPSK
SYTDYRVGTALPGKYPFCYQ

>gi568815595r:81390410_81861517|GENSCAN_predicted_CDS_5|963_bp
atgctgaatgtggagtataaaattgcagttaagagatggtggttggaagaatatcgcttt
gatggatttcgttttgatggtgttacgtccatgctttatcatcaccatggagtgggtcaa
ggtttctcaggtgattacagtgaatatttcggactacaagtagatgaagatgccttgact
tacctcatgttggcaaatcatttggttcacacgctgtgtcccgattctataacaatagct
gaggatgtatcaggaatgccagctctgtgctctccaatttcccagggagggggtggtttt
gactatcgactagccatggcaattccagataagtggattcagctacttaaagagtttaaa
gatgaagactggaacatgggcgatatagtatacacgctcacaaacaggcgctaccttgaa
aagtgcattgcttatgcagagagccatgatcaggcattggttggggataagtcgctggca
ttttggttgatggatgccgaaatgtatacaaacatgagtgtcctgactccttttactcca
gttattgatcgtggaatacagcttcataaaatgattcgactcattacgcatgggcttggt
ggagaaggctatctcaatttcatgggtaatgaatttgggcatcctgaatggttagacttc
ccaagaaaaggaaataatgagagttaccattatgccaggcggcagtttcatttaactgac
gacgaccttcttcgctacaagttcctaaataattttgacagggatatgaatagattggaa
gaaagatatggttggcttgcagctccacaggcctacgtgagtgaaaaacatgaaggcaat
aagatcattgcttttgaaagagcaggtcttcttttcattttcaacttccatccaagcaag
agctacactgactaccgagttggaacagcattgccagggaaatatcctttttgttaccag
tga

>gi568815595r:81390410_81861517|GENSCAN_predicted_peptide_6|116_aa
MAQELQRYCHHNGWQKQKYHSSLKRQGLRRTPVTAGVDELGEFIKDNIWPKPLQYYLVPD
MDDEEGKGEKDDDDDDDDDAKEEGLEDTDEVGDKDEGEEDEDDEGEEREEDEGEDD

>gi568815595r:81390410_81861517|GENSCAN_predicted_CDS_6|351_bp
atggcccaggaacttcagaggtactgtcatcacaatggctggcagaagcaaaaataccat
agctctctgaagcgccaaggcttgcggagaacacctgtgactgcaggtgtggatgagtta
ggagagttcatcaaagacaatatttggccaaaaccattacagtactacttggttcctgat
atggatgatgaagaaggaaaaggagaaaaagatgatgatgatgatgacgatgatgacgca
aaggaggaaggattagaagatactgatgaagtaggggataaggatgaaggtgaagaagat
gaagatgatgaaggggaggaaagagaggaggatgaaggagaagatgactaa

>gi568815595r:81390410_81861517|GENSCAN_predicted_peptide_7|404_aa
MAAPMTPAARPEDYEAALNAALADVPELARLLEIDPYLKPYAVDFQRRYKQFSQILKNIG
ENEGGIDKFSRGYESFGVHRCADGGLYCKEWAPGAEGVFLTGDFSSLSEYRFALWRGLQK
CGKSVKAVQHCFCSSKQLFHADGWNPFSYPYKKLDYGKWELYIPPKQNKSVLVPHGSKLK
VVITSKSGEILYRISPWAKYVVREGDNVNYDWIHWDPEHSYEFKHSRPKKPRSLRIYESH
VGISSHEGKVASYKHFTCNVLPRIKGLGYNCIQLMAIMEHAYYASFGYQITSFFAASSRY
GTPEELQELVDTAHSMGIIVLLDVVHSHASKNSADGLNMFDGTDSCYFHSGPRGTHDLWD
SRLFAYSRGMDEAGNRHSQQTNTGTENQTLHVLTDKSESNNENI

>gi568815595r:81390410_81861517|GENSCAN_predicted_CDS_7|1215_bp
atggcggctccgatgactcccgcggctcggcccgaggactacgaggcggcgctcaatgcc
gccctggctgacgtgcccgaactggccagactcctggagatcgacccgtacttgaagccc
tacgccgtggacttccagcgcaggtataagcagtttagccaaattttgaagaacattgga
gaaaatgaaggtggtattgataagttttccagaggctatgaatcatttggcgtccacaga
tgtgctgatggtggtttatactgcaaagaatgggccccgggagcagaaggagtttttctt
actggagattttagtagcttatctgagtatcgttttgcattgtggagaggtttacagaaa
tgtggtaaatctgtcaaagctgtacagcattgtttttgctcatccaagcagttgtttcat
gcagatggttggaatccattttcgtacccatacaaaaaactggattatggaaaatgggag
ctgtatatcccaccaaagcagaataaatctgtactcgtgcctcatggatccaaattaaag
gtagttattactagtaaaagcggagagatcttgtatcgtatttcaccgtgggcaaagtat
gtggttcgtgaaggtgataatgtgaattatgattggatacactgggatccagaacactca
tatgagtttaagcattccagaccaaagaagccacggagtctaagaatttatgaatctcat
gtgggaatttcttcccatgaaggaaaagtagcttcttataaacattttacatgcaatgta
ctaccaagaatcaaaggccttggatacaactgcattcagttgatggcaatcatggagcat
gcttactatgccagctttggttaccaaatcacaagcttctttgcagcttccagccgttat
ggaacacctgaagagctacaagaactggtagacacagctcattccatgggtatcatagtc
ctcttagatgtggtacacagccatgcttcaaaaaattcagcagatggattgaatatgttt
gatgggacagattcctgttattttcattctggacctagagggactcatgatctttgggat
agcagattgtttgcctactccaggggcatggatgaagctggaaaccgtcattctcagcaa
actaacacaggaacagaaaaccaaacactgcatgttctcactgataaatcggagtcaaac
aatgagaacatatga

>gi568815595r:81390410_81861517|GENSCAN_predicted_peptide_8|149_aa
MLCAALDLMLCIPATLAMAKRGQSTAQAIASEDMSPQPWQLPHDYMCPTAMQKTRIEVWE
PPPTFQRMYGNAWMSRQRCAAGAEPSWRTFARAVQKGNVELESPHRVPTGALSSGAVRRG
HRPPDPRMVDTMTACTVCLEKPQTLNASP

>gi568815595r:81390410_81861517|GENSCAN_predicted_CDS_8|450_bp
atgctgtgcgcagccttggatttgatgctctgcatcccagccactctagcaatggctaaa
aggggccaaagtacagctcaggccattgcttcagaggatatgagcccccagccttggcag
cttccacatgactacatgtgtcctacagctatgcagaagacaagaattgaggtttgggaa
cctccacctacatttcagaggatgtatggaaatgcctggatgtccaggcagaggtgtgct
gcaggggcagagccctcatggagaacctttgctagggcagtgcagaagggaaatgtggag
ttggagtccccacacagagtccccactggggcactctctagtggagctgtgagaagaggg
caccgtcctccagaccccagaatggtagatacaatgacagcttgcactgtgtgcctggaa
aagccacagacactcaatgccagcccatga

>gi568815595r:81390410_81861517|GENSCAN_predicted_peptide_9|175_aa
MPEPPTHSVSSCAAPASLTSATPCSTAPSPIDHPRAEECGCRAWDWQAAPPAAPVRDPLG
KASWAPESAKVCSFTPEANKTTNPPGGTTNSRRAALRAVTLTSRVRDFTPEPARPRTHQK
EETPNTSEHQKEQKSRRATLRAVTLTARVCSFILEVSETKNPPIPDTRGVGHIFA

>gi568815595r:81390410_81861517|GENSCAN_predicted_CDS_9|528_bp
atgcctgagcctcccacccactccgtgagctcctgtgcggccccagcctccctgacgagc
gccaccccctgctccacggcacccagccctatcgaccacccaagggctgaggagtgtggg
tgcagggcgtgggactggcaggcagctccacctgcagccccggtgcgggatccactgggt
aaagccagctgggctcctgagtctgcgaaggtctgcagcttcactcctgaagccaacaag
accacgaacccaccgggaggaactaccaattccagacgcgccgccttaagagctgtaaca
ctcacctccagggtccgcgacttcactcctgagccagcgagaccacgaacccaccagaag
gaagaaactccgaacacatccgaacatcagaaggaacaaaagtccagacgcgccacctta
agagctgtaacactcaccgcgagggtctgcagcttcattcttgaagtcagtgagaccaag
aacccaccaattccggacacacggggagtagggcacatctttgcttag