GENSCAN 1.0	Date run:  5-Nov-116	Time: 05:09:17

Sequence gi568815591f:116134532_116357479 : 222948 bp : 37.43% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +  11640  11667   28  2  1   80  108    29 0.122   3.91
 1.02 Term +  26077  26189  113  2  2   88   36   117 0.238   4.24
 1.03 PlyA +  26196  26201    6                               1.05

 2.00 Prom +  28287  28326   40                              -4.85
 2.01 Init +  29771  29831   61  1  1   75   64    75 0.923   5.26
 2.02 Intr +  36052  36145   94  2  1   85   86    60 0.789   3.60
 2.03 Intr +  37246  37433  188  1  2    8  100    95 0.621   1.11
 2.04 Intr +  39322  39413   92  2  2  119   55    64 0.539   4.99
 2.05 Intr +  45401  45425   25  1  1   81  119    -1 0.094  -1.02
 2.06 Intr +  46719  46894  176  1  2   52   78   131 0.087   7.24
 2.07 Intr +  51082  51322  241  0  1   -5   89   238 0.051  10.80
 2.08 Intr +  51643  51836  194  2  2   82   81    80 0.682   4.99
 2.09 Term +  51923  52393  471  1  0   47   35   131 0.712  -2.36
 2.10 PlyA +  52478  52483    6                               1.05

 3.00 Prom +  54354  54393   40                              -4.45
 3.01 Init +  64253  64316   64  1  1  111   62    64 0.919   7.46
 3.02 Term +  67225  67262   38  2  2  108   40    49 0.772  -1.38
 3.03 PlyA +  67602  67607    6                               1.05

 4.05 PlyA -  67963  67958    6                               1.05
 4.04 Term -  73536  73474   63  0  0   96   36    57 0.552  -1.79
 4.03 Intr -  76182  75883  300  0  0  115  100   322 0.770  32.11
 4.02 Intr -  95830  95709  122  2  2   59  108    37 0.355   2.09
 4.01 Init - 104520 104484   37  0  1   59  113    20 0.274   1.84
 4.00 Prom - 106045 106006   40                              -4.55

 5.00 Prom + 109277 109316   40                              -6.55
 5.01 Init + 109926 109975   50  2  2   66   98    22 0.446   1.48
 5.02 Intr + 114489 114741  253  0  1   55   27   292 0.998  16.31
 5.03 Intr + 115630 115965  336  0  0   79   92   441 0.999  38.39
 5.04 Intr + 117229 117444  216  0  0   67   87   179 0.998  13.48
 5.05 Intr + 117787 117945  159  0  0   81   69    86 0.961   5.26
 5.06 Term + 122763 122951  189  2  0  111   49    52 0.797   0.07
 5.07 PlyA + 123030 123035    6                               1.05

 6.00 Prom + 125630 125669   40                              -1.15
 6.01 Init + 131671 131772  102  0  0   81    4   153 0.631   6.49
 6.02 Term + 131951 132160  210  1  0  -32   44   241 0.909   4.01
 6.03 PlyA + 132366 132371    6                               1.05

 7.04 PlyA - 132606 132601    6                               1.05
 7.03 Term - 153111 152992  120  0  0  108   38    63 0.030   0.79
 7.02 Intr - 157698 157588  111  0  0   45   89    52 0.025   0.66
 7.01 Init - 171226 171128   99  1  0   88   92    57 0.241   6.41
 7.00 Prom - 178938 178899   40                              -3.95

 8.00 Prom + 180340 180379   40                              -8.25
 8.01 Init + 180908 180974   67  1  1   70  105    68 0.815   8.06
 8.02 Intr + 185110 185228  119  2  2   54   56   111 0.239   3.76
 8.03 Intr + 200065 200195  131  0  2    7    4   130 0.667  -4.93
 8.04 Term + 201030 201240  211  0  1  106   54   174 0.992  11.58
 8.05 PlyA + 201604 201609    6                               1.05

 9.00 Prom + 202102 202141   40                              -8.05
 9.01 Init + 204083 204252  170  1  2   85   94   105 0.769   9.85
 9.02 Intr + 215566 215654   89  1  2   49   53   104 0.017   1.70
 9.03 Term + 220283 220335   53  0  2  107   43    23 0.028  -3.69
 9.04 PlyA + 220355 220360    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815591f:116134532_116357479|GENSCAN_predicted_peptide_1|46_aa
MSNCRSTKTTDSVITKAGVQMERPSAQASSGSDEQSFLISYVGLVA

>gi568815591f:116134532_116357479|GENSCAN_predicted_CDS_1|141_bp
atgagcaactgcagatctacaaagacaactgactcagtgatcaccaaagcaggtgtccag
atggagcgtccatcagctcaggcctcaagtggttctgatgaacaaagcttccttataagc
tatgttggactcgtagcataa

>gi568815591f:116134532_116357479|GENSCAN_predicted_peptide_2|513_aa
MNPDRRLGNSAMGNLTNHHKRLGCTIGKKGVGGEEGECAGTGERSSDKTSPGGLKKSINV
HQFESQNLRLRWIQGVMILPVKSSRGFAREDSRVLNGECSGMECLELEGTQGFKEQREKR
AIQVKGRELTVECQEMLTEMNRTGQHLPLCLTPDVFGVSSFWFVRGVAGSEAKLHTFAVS
VTALKAVRLELFVSSSGFLVSLASGAKLQTFALQVPAQVLAPRKAMAGPDALHAASAVGT
HNWMRETQWHLKIWRCQEPQSPKEGVTALAQGAPKSGLPEGLQLFCPHHPQHAGNPDVCV
SLAGFFVVSEGRKCMLIGPWAAMDGPAKSTISSHSRLWTPPETDSPAPGFQAIHGLKAVP
TEEHLKACAELPSAPIGLPPMLVGTQSPEEAQAAGGWPVSATPSACTPGWVATTPRLSHN
CAAPWSGCWELGENRQWEQALASLWEQGAFWAPKSTGMPSWVAAAVGAWGSCPADSVEAR
AATCSGPHWLHAACSPTVPPPLQPVSSQWSLHG

>gi568815591f:116134532_116357479|GENSCAN_predicted_CDS_2|1542_bp
atgaatccggatagacgtctaggaaactctgccatgggtaacttgacaaatcatcacaaa
cgcttgggatgcacaattgggaagaagggtgttgggggtgaggagggggaatgtgcagga
actggggaaagaagttcagataagacaagtccaggagggctgaagaagagcatcaacgtc
caccagttcgaatcccagaatctcagactcaggtggatccaaggagtgatgatccttcct
gtgaaaagcagtagaggttttgcaagggaagatagtagagtattgaatggagaatgttca
ggaatggaatgtttggagctggagggcacacaggggtttaaagaacaaagagagaaaaga
gcaatacaagtgaaaggaagagaattaacagttgagtgtcaagagatgctgactgaaatg
aacagaacagggcaacacctacccctgtgcctcacacctgatgtgttcggagtttcttcc
ttctggtttgttcgtggtgtcgctggctcagaagcgaagctgcacaccttcgcggtcagc
gttacagctctcaaggcggtgcgtctggagttgttcgtttcttccagtgggttcttggtc
tcactggcttcaggagcgaagctgcagacctttgccctccaggtgccggcacaggtgcta
gctccacgcaaagctatggctggaccagatgcactgcacgcagcttctgctgtgggcacc
cacaactggatgagggaaacgcagtggcacctgaaaatttggagatgccaggaaccacag
agcccaaaagagggtgtcacagccctggctcagggagcccctaagtctgggctccccgaa
ggtctgcagctcttctgtcctcatcacccacaacatgctggtaatcctgatgtctgtgtg
agtctggctgggttttttgtggtctcagaagggaggaaatgtatgctgattggtccatgg
gcagccatggacgggcctgcaaaaagcaccataagttctcactccaggctgtggactcca
cctgaaactgacagtccagcccccggttttcaggccatccatggcttgaaggcagttcct
actgaagagcacctgaaggcctgtgctgagctgccctcagcccctattggcctccctccc
atgctcgttggcacccaaagtccagaggaggcccaggcagcagggggctggcctgtcagt
gccaccccaagtgcatgcacacctggctgggttgcaacaacacccaggctcagccacaac
tgtgctgcaccctggagtgggtgctgggagttgggagagaataggcaatgggagcaggca
cttgccagcctgtgggagcaaggagctttctgggcccccaagagcacagggatgcccagc
tgggtggctgcagctgtaggagcatggggctcctgcccagctgactcagtagaggccagg
gctgccacctgttctggcccccactggctccatgcagcatgcagccccactgtgcctccg
ccactgcagccagtgtcttcccagtggtcactccatggttag

>gi568815591f:116134532_116357479|GENSCAN_predicted_peptide_3|33_aa
MEYFWWKKKMIDLETGMNSPEEFYIEEPRSFDL

>gi568815591f:116134532_116357479|GENSCAN_predicted_CDS_3|102_bp
atggagtatttttggtggaaaaagaagatgattgacttggaaaccggaatgaatagccca
gaagaattttatattgaagaaccaagatcatttgatctgtag

>gi568815591f:116134532_116357479|GENSCAN_predicted_peptide_4|173_aa
MSLKADSSLALKVRFVTAWKKCPSTFPNTNTFIFPTCSDLSVRELLNITDREQVHVNASY
GSPPPPIRDPTAGFSWPPAPLRTRETCGTPAAPLNSHSPGAVELPPPSPPQRACGPDPGT
KGAGQPMAAGQLRAAANHRAPHAPSRPERGAGKSALVNVGLDFSTKLMDTSAK

>gi568815591f:116134532_116357479|GENSCAN_predicted_CDS_4|522_bp
atgagcttgaaagcagattcttccctcgcacttaaagttagatttgtgactgcctggaaa
aagtgcccctctacctttccaaacacaaacactttcattttccccacatgctcagaccta
agtgtgagggaacttttaaacatcacagacagagagcaagtccatgttaacgcgtcctat
gggtcccctcctcctcctatccgggatcccacggccgggttcagctggcctccggctccg
ctgcgaacacgggaaacctgcggaactcccgcggcgccgctcaacagccactcgcccggc
gccgtcgaacttccgccgcccagtccgccgcagcgggcctgcggcccggacccgggaaca
aagggggccgggcagccaatggcagccgggcagctccgggccgccgccaatcaccgagcg
ccgcacgcaccttcgcggcccgagcgcggcgctggcaagagtgctttagtcaatgttgga
cttgacttttccacaaaacttatggacacatcagccaaataa

>gi568815591f:116134532_116357479|GENSCAN_predicted_peptide_5|400_aa
MSFDFMSHIQGVLMQKRKICRNCKCGQEEHDVLLSNEEDRKVGKLFEDTKYTTLIAKLKS
DGIPMYKRNVMILTNPVAAKKNVSINTVTYEWAPPVQNQALARQYMQMLPKEKQPVAGSE
GAQYRKKQLAKQLPAHDQDPSKCHELSPREVKEMEQFVKKYKSEALGVGDVKLPCEMDAQ
GPKQMNIPGGDRSTPAAVGAMEDKSAEHKRTQYSCYCCKLSMKEGDPAIYAERAGYDKLW
HPACFVCSTCHELLVDMIYFWKNEKLYCGRHYCDSEKPRCAGCDELIFSNEYTQAENQNW
HLKHFCCFDCDSILAGEIYVMVNDKPVCKPCYVKNHAVVCQGCHNAIDPEVQRVTYNNFS
WHASTECFLCSCCSKCLIGQKFMPVEGMVFCSVECKKRMS

>gi568815591f:116134532_116357479|GENSCAN_predicted_CDS_5|1203_bp
atgtcctttgacttcatgtctcacatccagggtgtgctaatgcaaaaaagaaaaatatgt
cgtaactgcaagtgtggccaagaagagcatgatgtcctcttgagcaatgaagaggatcga
aaagtgggaaaactttttgaagacaccaagtataccactctgattgcaaaactaaagtca
gatggaattcccatgtataaacgcaatgttatgatattgacgaatccagttgctgccaag
aagaatgtctccatcaatacagttacctatgagtgggctcctcctgtccagaatcaagca
ttggccaggcagtacatgcagatgctacccaaggaaaagcagccagtagcaggctcagag
ggggcacagtaccggaagaagcagctggcaaagcagctccctgcacatgaccaggaccct
tcaaagtgccatgagttgtctcccagagaggtgaaggagatggagcagtttgtgaagaaa
tataagagcgaagctctgggagtaggagatgtcaaacttccctgtgagatggatgcccaa
ggccccaaacaaatgaacattcctggaggggatagaagcaccccagcagcagtgggggcc
atggaggacaaatctgctgagcacaaaagaactcaatattcctgctattgctgcaaactg
agtatgaaagaaggtgacccagccatctatgccgaaagggctggctatgataaactgtgg
cacccagcttgttttgtctgcagcacctgccatgaactcctggttgacatgatttatttt
tggaagaatgagaagctatactgtggcagacattactgtgacagcgagaaaccccgatgt
gctggctgtgacgagctgatattcagcaatgagtatacccaggcagaaaaccagaattgg
cacctgaaacacttctgctgctttgactgtgatagcattctagctggggagatatacgtg
atggtcaatgacaagcccgtgtgcaagccctgctatgtgaagaatcacgctgtggtgtgt
caaggatgccacaatgccatcgacccagaagtgcagcgggtgacctataacaatttcagc
tggcatgcatccacagagtgctttctgtgctcttgctgcagcaaatgcctcattgggcag
aagttcatgccagtagaagggatggttttctgttcagtggaatgtaagaagaggatgtct
tag

>gi568815591f:116134532_116357479|GENSCAN_predicted_peptide_6|103_aa
MQVTENENNEDLSLTGDNGSDAKAAVCDVKISSLGRAEKKNDQFTWEYVELEASGGVQQA
VWDLKVDAQEKTLARDIDEEVNRQKLPFTSDNSLLGLQSPYQM

>gi568815591f:116134532_116357479|GENSCAN_predicted_CDS_6|312_bp
atgcaggtaacagaaaatgaaaataatgaagacctgtcactgacaggagacaacggaagt
gatgccaaagcagctgtttgtgatgtcaaaatatcttctctaggaagagctgagaagaaa
aatgatcagttcacttgggagtatgtggagcttgaggcaagtggaggagtacagcaggca
gtttgggacctgaaagtggatgctcaagaaaaaactctggctagagatatagatgaagaa
gtcaacagacaaaagttaccattcacatctgataatagcttactggggctccagtctcct
tatcaaatgtga

>gi568815591f:116134532_116357479|GENSCAN_predicted_peptide_7|109_aa
MTTTNCTRSGKVMQFRFIGMQDLGNLTLTHLCQDSASDLKPAQHWVSLRVSCETAWLPPM
FAQGSRALKSVYAQKSPYQRSFQNTLSQTADPIVSDMLTVMVNIECQLN

>gi568815591f:116134532_116357479|GENSCAN_predicted_CDS_7|330_bp
atgacaacaaccaattgcaccagaagtggaaaagtgatgcaattcaggttcatcggaatg
caggatcttgggaatttgacattgacacacctatgtcaggacagtgcttcagacctgaag
ccggcacagcattgggtttcactcagagtcagctgtgaaactgcctggctaccacctatg
tttgctcaaggctctagggctctaaaatcagtctatgctcaaaagtcaccttaccagagg
tcctttcagaacaccctgtcccaaacagcagaccctatagtctctgatatgcttactgtg
atggttaatattgagtgtcagcttaattag

>gi568815591f:116134532_116357479|GENSCAN_predicted_peptide_8|175_aa
MPTQTRGMTGLPQTVPTGQSLPGHSVLPLLSKQQQRTILESGDGPHQTTKSADTLDFPAS
RTVNQPPEPTTNFCVGDGGIQMPPVIMEAEADRGHDSSSLLKAEDRPKSCTVGITKEAFD
DVPKRVPQSSHRRCKAYQRPRNVCVAQWGNVERPQKPRGDSDWEKEATQPRDFTP

>gi568815591f:116134532_116357479|GENSCAN_predicted_CDS_8|528_bp
atgccaacgcagacccggggaatgacaggacttccccagacagtccccaccgggcagagt
ctgcccggacacagtgttctgcctctcctgagtaagcagcaacaacgcaccatcttggaa
tcaggggacggccctcaccagacaactaaatctgcagacaccttggacttcccagcctcc
agaactgttaatcagcctccagaacccaccaccaatttttgtgttggtgatgggggaatc
cagatgcctccagtcattatggaagctgaagctgacagaggccatgactcctcatccctg
ctgaaggcagaggataggccaaagagctgtacagtaggaattacaaaggaagcatttgat
gatgtacccaagagggtgccccagtcctcccatagacgatgcaaggcataccagagaccc
agaaatgtctgtgtggctcagtggggaaatgtggagaggccacaaaaacctagaggggac
tctgattgggaaaaggaagctacacagcctagggactttactccttga

>gi568815591f:116134532_116357479|GENSCAN_predicted_peptide_9|103_aa
MALEVAMEINIQLMEEARERMQKPHQLFNYLGPEVTGATTSHILLVEISHMASPNCYFLT
KMVTKVCCTGLHTPEHPPVSADTPTAGWFLCRNVREQDLSGSD

>gi568815591f:116134532_116357479|GENSCAN_predicted_CDS_9|312_bp
atggctttagaggttgccatggaaatcaacatccaactgatggaagaggcaagagaaagg
atgcaaaaaccacaccagctgtttaattacctgggtccagaagtaacaggtgccactacc
tctcacattctattagtggaaattagtcacatggcctctcctaactgctactttcttacc
aagatggtcaccaaggtctgctgcacaggattgcatactccagagcaccctccagtcagt
gcagacacaccaaccgctggctggttcctctgcaggaatgtgagggagcaagacttgtca
ggttctgactaa