Result of FASTA (omim) for pF1KB3437
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB3437, 219 aa
  1>>>pF1KB3437 219 - 219 aa - 219 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 4.3440+/-0.000358; mu= 19.4433+/- 0.022
 mean_var=66.7577+/-13.232, 0's: 0 Z-trim(113.8): 94  B-trim: 0 in 0/49
 Lambda= 0.156972
 statistics sampled from 23198 (23292) to 23198 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.635), E-opt: 0.2 (0.273), width:  16
 Scan time:  5.710

The best scores are:                                      opt bits E(85289)
NP_001035122 (OMIM: 151525) leukocyte surface anti ( 219) 1480 343.7 1.4e-94
NP_000551 (OMIM: 151525) leukocyte surface antigen ( 219) 1480 343.7 1.4e-94
NP_001307567 (OMIM: 151525) leukocyte surface anti ( 160)  714 170.1 1.9e-42
NP_001161792 (OMIM: 613137) tetraspanin-9 [Homo sa ( 239)  566 136.8   3e-32
NP_006666 (OMIM: 613137) tetraspanin-9 [Homo sapie ( 239)  566 136.8   3e-32
NP_001020408 (OMIM: 602644) tetraspanin-4 isoform  ( 238)  504 122.7 5.1e-28
NP_001020409 (OMIM: 602644) tetraspanin-4 isoform  ( 238)  504 122.7 5.1e-28
NP_003262 (OMIM: 602644) tetraspanin-4 isoform a [ ( 238)  504 122.7 5.1e-28
NP_001020407 (OMIM: 602644) tetraspanin-4 isoform  ( 238)  504 122.7 5.1e-28
XP_005253159 (OMIM: 602644) PREDICTED: tetraspanin ( 238)  504 122.7 5.1e-28
NP_001020405 (OMIM: 602644) tetraspanin-4 isoform  ( 238)  504 122.7 5.1e-28
NP_001020406 (OMIM: 602644) tetraspanin-4 isoform  ( 238)  504 122.7 5.1e-28
XP_011518638 (OMIM: 602644) PREDICTED: tetraspanin ( 269)  423 104.4 1.8e-22
XP_006718286 (OMIM: 176807,600623) PREDICTED: CD82 ( 267)  403 99.9 4.2e-21
NP_002222 (OMIM: 176807,600623) CD82 antigen isofo ( 267)  403 99.9 4.2e-21
NP_001760 (OMIM: 143030) CD9 antigen isoform 1 [Ho ( 228)  364 91.0 1.7e-18
XP_011519215 (OMIM: 613137) PREDICTED: tetraspanin ( 175)  362 90.4   2e-18
XP_011519214 (OMIM: 613137) PREDICTED: tetraspanin ( 175)  362 90.4   2e-18
NP_620599 (OMIM: 179620,602243,609057) CD151 antig ( 253)  355 89.0 7.6e-18
NP_001034579 (OMIM: 179620,602243,609057) CD151 an ( 253)  355 89.0 7.6e-18
NP_004348 (OMIM: 179620,602243,609057) CD151 antig ( 253)  355 89.0 7.6e-18
NP_620598 (OMIM: 179620,602243,609057) CD151 antig ( 253)  355 89.0 7.6e-18
NP_004607 (OMIM: 600769) tetraspanin-8 [Homo sapie ( 237)  353 88.5 9.9e-18
XP_006719646 (OMIM: 600769) PREDICTED: tetraspanin ( 237)  353 88.5 9.9e-18
XP_016875402 (OMIM: 600769) PREDICTED: tetraspanin ( 237)  353 88.5 9.9e-18
NP_005716 (OMIM: 613133) tetraspanin-2 isoform 1 [ ( 221)  338 85.1   1e-16
NP_001765 (OMIM: 151523) leukocyte antigen CD37 is ( 281)  334 84.3 2.2e-16
XP_005259492 (OMIM: 151523) PREDICTED: leukocyte a ( 365)  334 84.4 2.6e-16
NP_005715 (OMIM: 613134) tetraspanin-3 isoform 1 [ ( 253)  329 83.1 4.5e-16
NP_005714 (OMIM: 613136) tetraspanin-5 [Homo sapie ( 268)  326 82.5 7.5e-16
NP_001020410 (OMIM: 602644) tetraspanin-4 isoform  ( 174)  320 80.9 1.4e-15
XP_011518640 (OMIM: 602644) PREDICTED: tetraspanin ( 174)  320 80.9 1.4e-15
XP_011518639 (OMIM: 602644) PREDICTED: tetraspanin ( 174)  320 80.9 1.4e-15
XP_011518643 (OMIM: 602644) PREDICTED: tetraspanin ( 174)  320 80.9 1.4e-15
XP_011518642 (OMIM: 602644) PREDICTED: tetraspanin ( 174)  320 80.9 1.4e-15
XP_006716023 (OMIM: 610120) PREDICTED: tetraspanin ( 282)  316 80.2 3.7e-15
NP_005718 (OMIM: 613170) tetraspanin-1 [Homo sapie ( 241)  314 79.7 4.6e-15
XP_011538762 (OMIM: 613170) PREDICTED: tetraspanin ( 258)  314 79.7 4.8e-15
NP_848657 (OMIM: 610120) tetraspanin-33 [Homo sapi ( 283)  313 79.6   6e-15
NP_001771 (OMIM: 155740) CD63 antigen isoform A [H ( 238)  310 78.8 8.5e-15
NP_001244318 (OMIM: 155740) CD63 antigen isoform A ( 238)  310 78.8 8.5e-15
NP_001254627 (OMIM: 155740) CD63 antigen isoform A ( 238)  310 78.8 8.5e-15
NP_001244319 (OMIM: 155740) CD63 antigen isoform A ( 238)  310 78.8 8.5e-15
NP_001244320 (OMIM: 155740) CD63 antigen isoform A ( 238)  310 78.8 8.5e-15
NP_004347 (OMIM: 186845,613496) CD81 antigen isofo ( 236)  292 74.7 1.4e-13
NP_001295245 (OMIM: 613133) tetraspanin-2 isoform  ( 193)  282 72.4   6e-13
XP_011518369 (OMIM: 176807,600623) PREDICTED: CD82 ( 236)  282 72.4 6.8e-13
NP_003261 (OMIM: 300191) tetraspanin-6 isoform a [ ( 245)  275 70.9 2.1e-12
NP_001244321 (OMIM: 155740) CD63 antigen isoform C ( 215)  273 70.4 2.6e-12
NP_001317241 (OMIM: 143030) CD9 antigen isform 2 [ ( 159)  262 67.7 1.2e-11


>>NP_001035122 (OMIM: 151525) leukocyte surface antigen   (219 aa)
 initn: 1480 init1: 1480 opt: 1480  Z-score: 1819.1  bits: 343.7 E(85289): 1.4e-94
Smith-Waterman score: 1480; 100.0% identity (100.0% similar) in 219 aa overlap (1-219:1-219)

               10        20        30        40        50        60
pF1KB3 MGMSSLKLLKYVLFFFNLLFWICGCCILGFGIYLLIHNNFGVLFHNLPSLTLGNVFVIVG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MGMSSLKLLKYVLFFFNLLFWICGCCILGFGIYLLIHNNFGVLFHNLPSLTLGNVFVIVG
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB3 SIIMVVAFLGCMGSIKENKCLLMSFFILLLIILLAEVTLAILLFVYEQKLNEYVAKGLTD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SIIMVVAFLGCMGSIKENKCLLMSFFILLLIILLAEVTLAILLFVYEQKLNEYVAKGLTD
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB3 SIHRYHSDNSTKAAWDSIQSFLQCCGINGTSDWTSGPPASCPSDRKVEGCYAKARLWFHS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SIHRYHSDNSTKAAWDSIQSFLQCCGINGTSDWTSGPPASCPSDRKVEGCYAKARLWFHS
              130       140       150       160       170       180

              190       200       210         
pF1KB3 NFLYIGIITICVCVIEVLGMSFALTLNCQIDKTSQTIGL
       :::::::::::::::::::::::::::::::::::::::
NP_001 NFLYIGIITICVCVIEVLGMSFALTLNCQIDKTSQTIGL
              190       200       210         

>>NP_000551 (OMIM: 151525) leukocyte surface antigen CD5  (219 aa)
 initn: 1480 init1: 1480 opt: 1480  Z-score: 1819.1  bits: 343.7 E(85289): 1.4e-94
Smith-Waterman score: 1480; 100.0% identity (100.0% similar) in 219 aa overlap (1-219:1-219)

               10        20        30        40        50        60
pF1KB3 MGMSSLKLLKYVLFFFNLLFWICGCCILGFGIYLLIHNNFGVLFHNLPSLTLGNVFVIVG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 MGMSSLKLLKYVLFFFNLLFWICGCCILGFGIYLLIHNNFGVLFHNLPSLTLGNVFVIVG
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB3 SIIMVVAFLGCMGSIKENKCLLMSFFILLLIILLAEVTLAILLFVYEQKLNEYVAKGLTD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 SIIMVVAFLGCMGSIKENKCLLMSFFILLLIILLAEVTLAILLFVYEQKLNEYVAKGLTD
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB3 SIHRYHSDNSTKAAWDSIQSFLQCCGINGTSDWTSGPPASCPSDRKVEGCYAKARLWFHS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 SIHRYHSDNSTKAAWDSIQSFLQCCGINGTSDWTSGPPASCPSDRKVEGCYAKARLWFHS
              130       140       150       160       170       180

              190       200       210         
pF1KB3 NFLYIGIITICVCVIEVLGMSFALTLNCQIDKTSQTIGL
       :::::::::::::::::::::::::::::::::::::::
NP_000 NFLYIGIITICVCVIEVLGMSFALTLNCQIDKTSQTIGL
              190       200       210         

>>NP_001307567 (OMIM: 151525) leukocyte surface antigen   (160 aa)
 initn: 714 init1: 714 opt: 714  Z-score: 883.2  bits: 170.1 E(85289): 1.9e-42
Smith-Waterman score: 933; 73.1% identity (73.1% similar) in 219 aa overlap (1-219:1-160)

               10        20        30        40        50        60
pF1KB3 MGMSSLKLLKYVLFFFNLLFWICGCCILGFGIYLLIHNNFGVLFHNLPSLTLGNVFVIVG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MGMSSLKLLKYVLFFFNLLFWICGCCILGFGIYLLIHNNFGVLFHNLPSLTLGNVFVIVG
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB3 SIIMVVAFLGCMGSIKENKCLLMSFFILLLIILLAEVTLAILLFVYEQKLNEYVAKGLTD
       :::::::::::::::::::::::::::::::::::::::::::::::::           
NP_001 SIIMVVAFLGCMGSIKENKCLLMSFFILLLIILLAEVTLAILLFVYEQK-----------
               70        80        90       100                    

              130       140       150       160       170       180
pF1KB3 SIHRYHSDNSTKAAWDSIQSFLQCCGINGTSDWTSGPPASCPSDRKVEGCYAKARLWFHS
                                                       ::::::::::::
NP_001 ------------------------------------------------GCYAKARLWFHS
                                                     110       120 

              190       200       210         
pF1KB3 NFLYIGIITICVCVIEVLGMSFALTLNCQIDKTSQTIGL
       :::::::::::::::::::::::::::::::::::::::
NP_001 NFLYIGIITICVCVIEVLGMSFALTLNCQIDKTSQTIGL
             130       140       150       160

>>NP_001161792 (OMIM: 613137) tetraspanin-9 [Homo sapien  (239 aa)
 initn: 606 init1: 334 opt: 566  Z-score: 699.9  bits: 136.8 E(85289): 3e-32
Smith-Waterman score: 666; 40.9% identity (71.9% similar) in 235 aa overlap (1-215:1-235)

               10        20        30         40        50         
pF1KB3 MGMSSLKLLKYVLFFFNLLFWICGCCILGFGIYLLI-HNNFGVLFHNLPSLTLGNVFVIV
       :. . :  :::..:.:::.::.::: .:: ::.: . ..::...  ..:::. .:. . .
NP_001 MARGCLCCLKYMMFLFNLIFWLCGCGLLGVGIWLSVSQGNFATFSPSFPSLSAANLVIAI
               10        20        30        40        50        60

      60        70        80        90       100       110         
pF1KB3 GSIIMVVAFLGCMGSIKENKCLLMSFFILLLIILLAEVTLAILLFVYEQKLNEYVAKGLT
       :.:.::..::::.:.::::::::.::::.::.:::::. : ::.::: .:.:: . : : 
NP_001 GTIVMVTGFLGCLGAIKENKCLLLSFFIVLLVILLAELILLILFFVYMDKVNENAKKDLK
               70        80        90       100       110       120

     120       130         140       150             160           
pF1KB3 DSIHRYHSDNST--KAAWDSIQSFLQCCGINGTSDW------TSGPPASCPSDRK-----
       ...  ::..:..  : ::. ::. ..:::..  .::      .. :   :  . .     
NP_001 EGLLLYHTENNVGLKNAWNIIQAEMRCCGVTDYTDWYPVLGENTVPDRCCMENSQGCGRN
              130       140       150       160       170       180

              170       180       190       200       210         
pF1KB3 ------VEGCYAKARLWFHSNFLYIGIITICVCVIEVLGMSFALTLNCQIDKTSQTIGL
               ::: :...:: .:   .: . .:. ....:::.:..::  .: .:..    
NP_001 ATTPLWRTGCYEKVKMWFDDNKHVLGTVGMCILIMQILGMAFSMTLFQHIHRTGKKYDA
              190       200       210       220       230         

>>NP_006666 (OMIM: 613137) tetraspanin-9 [Homo sapiens]   (239 aa)
 initn: 606 init1: 334 opt: 566  Z-score: 699.9  bits: 136.8 E(85289): 3e-32
Smith-Waterman score: 666; 40.9% identity (71.9% similar) in 235 aa overlap (1-215:1-235)

               10        20        30         40        50         
pF1KB3 MGMSSLKLLKYVLFFFNLLFWICGCCILGFGIYLLI-HNNFGVLFHNLPSLTLGNVFVIV
       :. . :  :::..:.:::.::.::: .:: ::.: . ..::...  ..:::. .:. . .
NP_006 MARGCLCCLKYMMFLFNLIFWLCGCGLLGVGIWLSVSQGNFATFSPSFPSLSAANLVIAI
               10        20        30        40        50        60

      60        70        80        90       100       110         
pF1KB3 GSIIMVVAFLGCMGSIKENKCLLMSFFILLLIILLAEVTLAILLFVYEQKLNEYVAKGLT
       :.:.::..::::.:.::::::::.::::.::.:::::. : ::.::: .:.:: . : : 
NP_006 GTIVMVTGFLGCLGAIKENKCLLLSFFIVLLVILLAELILLILFFVYMDKVNENAKKDLK
               70        80        90       100       110       120

     120       130         140       150             160           
pF1KB3 DSIHRYHSDNST--KAAWDSIQSFLQCCGINGTSDW------TSGPPASCPSDRK-----
       ...  ::..:..  : ::. ::. ..:::..  .::      .. :   :  . .     
NP_006 EGLLLYHTENNVGLKNAWNIIQAEMRCCGVTDYTDWYPVLGENTVPDRCCMENSQGCGRN
              130       140       150       160       170       180

              170       180       190       200       210         
pF1KB3 ------VEGCYAKARLWFHSNFLYIGIITICVCVIEVLGMSFALTLNCQIDKTSQTIGL
               ::: :...:: .:   .: . .:. ....:::.:..::  .: .:..    
NP_006 ATTPLWRTGCYEKVKMWFDDNKHVLGTVGMCILIMQILGMAFSMTLFQHIHRTGKKYDA
              190       200       210       220       230         

>>NP_001020408 (OMIM: 602644) tetraspanin-4 isoform a [H  (238 aa)
 initn: 640 init1: 301 opt: 504  Z-score: 624.1  bits: 122.7 E(85289): 5.1e-28
Smith-Waterman score: 616; 37.1% identity (73.3% similar) in 232 aa overlap (1-212:1-232)

               10        20        30         40        50         
pF1KB3 MGMSSLKLLKYVLFFFNLLFWICGCCILGFGIYLLI-HNNFGVLFHNLPSLTLGNVFVIV
       :. . :. .::..: ::::::. :: .:: ::.:   ...:..:  ..:::. .:...:.
NP_001 MARACLQAVKYLMFAFNLLFWLGGCGVLGVGIWLAATQGSFATLSSSFPSLSAANLLIIT
               10        20        30        40        50        60

      60        70        80        90       100       110         
pF1KB3 GSIIMVVAFLGCMGSIKENKCLLMSFFILLLIILLAEVTLAILLFVYEQKLNEYVAKGLT
       :...:...:.::.:.::::::::..::.:::...: :.:.:::.:.: .:...:. . : 
NP_001 GAFVMAIGFVGCLGAIKENKCLLLTFFLLLLLVFLLEATIAILFFAYTDKIDRYAQQDLK
               70        80        90       100       110       120

     120       130         140       150            160            
pF1KB3 DSIHRYHSDNST--KAAWDSIQSFLQCCGINGTSDW-----TSGPPASC-----------
        ..: : .....    ::. ::. ..:::... .::     ..  : ::           
NP_001 KGLHLYGTQGNVGLTNAWSIIQTDFRCCGVSNYTDWFEVYNATRVPDSCCLEFSESCGLH
              130       140       150       160       170       180

              170       180       190       200       210         
pF1KB3 -PSDRKVEGCYAKARLWFHSNFLYIGIITICVCVIEVLGMSFALTLNCQIDKTSQTIGL
        :.      ::  ...:.. :.: .::. .:. ....::..::.:. ::. :       
NP_001 APGTWWKAPCYETVKVWLQENLLAVGIFGLCTALVQILGLTFAMTMYCQVVKADTYCA 
              190       200       210       220       230         

>>NP_001020409 (OMIM: 602644) tetraspanin-4 isoform a [H  (238 aa)
 initn: 640 init1: 301 opt: 504  Z-score: 624.1  bits: 122.7 E(85289): 5.1e-28
Smith-Waterman score: 616; 37.1% identity (73.3% similar) in 232 aa overlap (1-212:1-232)

               10        20        30         40        50         
pF1KB3 MGMSSLKLLKYVLFFFNLLFWICGCCILGFGIYLLI-HNNFGVLFHNLPSLTLGNVFVIV
       :. . :. .::..: ::::::. :: .:: ::.:   ...:..:  ..:::. .:...:.
NP_001 MARACLQAVKYLMFAFNLLFWLGGCGVLGVGIWLAATQGSFATLSSSFPSLSAANLLIIT
               10        20        30        40        50        60

      60        70        80        90       100       110         
pF1KB3 GSIIMVVAFLGCMGSIKENKCLLMSFFILLLIILLAEVTLAILLFVYEQKLNEYVAKGLT
       :...:...:.::.:.::::::::..::.:::...: :.:.:::.:.: .:...:. . : 
NP_001 GAFVMAIGFVGCLGAIKENKCLLLTFFLLLLLVFLLEATIAILFFAYTDKIDRYAQQDLK
               70        80        90       100       110       120

     120       130         140       150            160            
pF1KB3 DSIHRYHSDNST--KAAWDSIQSFLQCCGINGTSDW-----TSGPPASC-----------
        ..: : .....    ::. ::. ..:::... .::     ..  : ::           
NP_001 KGLHLYGTQGNVGLTNAWSIIQTDFRCCGVSNYTDWFEVYNATRVPDSCCLEFSESCGLH
              130       140       150       160       170       180

              170       180       190       200       210         
pF1KB3 -PSDRKVEGCYAKARLWFHSNFLYIGIITICVCVIEVLGMSFALTLNCQIDKTSQTIGL
        :.      ::  ...:.. :.: .::. .:. ....::..::.:. ::. :       
NP_001 APGTWWKAPCYETVKVWLQENLLAVGIFGLCTALVQILGLTFAMTMYCQVVKADTYCA 
              190       200       210       220       230         

>>NP_003262 (OMIM: 602644) tetraspanin-4 isoform a [Homo  (238 aa)
 initn: 640 init1: 301 opt: 504  Z-score: 624.1  bits: 122.7 E(85289): 5.1e-28
Smith-Waterman score: 616; 37.1% identity (73.3% similar) in 232 aa overlap (1-212:1-232)

               10        20        30         40        50         
pF1KB3 MGMSSLKLLKYVLFFFNLLFWICGCCILGFGIYLLI-HNNFGVLFHNLPSLTLGNVFVIV
       :. . :. .::..: ::::::. :: .:: ::.:   ...:..:  ..:::. .:...:.
NP_003 MARACLQAVKYLMFAFNLLFWLGGCGVLGVGIWLAATQGSFATLSSSFPSLSAANLLIIT
               10        20        30        40        50        60

      60        70        80        90       100       110         
pF1KB3 GSIIMVVAFLGCMGSIKENKCLLMSFFILLLIILLAEVTLAILLFVYEQKLNEYVAKGLT
       :...:...:.::.:.::::::::..::.:::...: :.:.:::.:.: .:...:. . : 
NP_003 GAFVMAIGFVGCLGAIKENKCLLLTFFLLLLLVFLLEATIAILFFAYTDKIDRYAQQDLK
               70        80        90       100       110       120

     120       130         140       150            160            
pF1KB3 DSIHRYHSDNST--KAAWDSIQSFLQCCGINGTSDW-----TSGPPASC-----------
        ..: : .....    ::. ::. ..:::... .::     ..  : ::           
NP_003 KGLHLYGTQGNVGLTNAWSIIQTDFRCCGVSNYTDWFEVYNATRVPDSCCLEFSESCGLH
              130       140       150       160       170       180

              170       180       190       200       210         
pF1KB3 -PSDRKVEGCYAKARLWFHSNFLYIGIITICVCVIEVLGMSFALTLNCQIDKTSQTIGL
        :.      ::  ...:.. :.: .::. .:. ....::..::.:. ::. :       
NP_003 APGTWWKAPCYETVKVWLQENLLAVGIFGLCTALVQILGLTFAMTMYCQVVKADTYCA 
              190       200       210       220       230         

>>NP_001020407 (OMIM: 602644) tetraspanin-4 isoform a [H  (238 aa)
 initn: 640 init1: 301 opt: 504  Z-score: 624.1  bits: 122.7 E(85289): 5.1e-28
Smith-Waterman score: 616; 37.1% identity (73.3% similar) in 232 aa overlap (1-212:1-232)

               10        20        30         40        50         
pF1KB3 MGMSSLKLLKYVLFFFNLLFWICGCCILGFGIYLLI-HNNFGVLFHNLPSLTLGNVFVIV
       :. . :. .::..: ::::::. :: .:: ::.:   ...:..:  ..:::. .:...:.
NP_001 MARACLQAVKYLMFAFNLLFWLGGCGVLGVGIWLAATQGSFATLSSSFPSLSAANLLIIT
               10        20        30        40        50        60

      60        70        80        90       100       110         
pF1KB3 GSIIMVVAFLGCMGSIKENKCLLMSFFILLLIILLAEVTLAILLFVYEQKLNEYVAKGLT
       :...:...:.::.:.::::::::..::.:::...: :.:.:::.:.: .:...:. . : 
NP_001 GAFVMAIGFVGCLGAIKENKCLLLTFFLLLLLVFLLEATIAILFFAYTDKIDRYAQQDLK
               70        80        90       100       110       120

     120       130         140       150            160            
pF1KB3 DSIHRYHSDNST--KAAWDSIQSFLQCCGINGTSDW-----TSGPPASC-----------
        ..: : .....    ::. ::. ..:::... .::     ..  : ::           
NP_001 KGLHLYGTQGNVGLTNAWSIIQTDFRCCGVSNYTDWFEVYNATRVPDSCCLEFSESCGLH
              130       140       150       160       170       180

              170       180       190       200       210         
pF1KB3 -PSDRKVEGCYAKARLWFHSNFLYIGIITICVCVIEVLGMSFALTLNCQIDKTSQTIGL
        :.      ::  ...:.. :.: .::. .:. ....::..::.:. ::. :       
NP_001 APGTWWKAPCYETVKVWLQENLLAVGIFGLCTALVQILGLTFAMTMYCQVVKADTYCA 
              190       200       210       220       230         

>>XP_005253159 (OMIM: 602644) PREDICTED: tetraspanin-4 i  (238 aa)
 initn: 640 init1: 301 opt: 504  Z-score: 624.1  bits: 122.7 E(85289): 5.1e-28
Smith-Waterman score: 616; 37.1% identity (73.3% similar) in 232 aa overlap (1-212:1-232)

               10        20        30         40        50         
pF1KB3 MGMSSLKLLKYVLFFFNLLFWICGCCILGFGIYLLI-HNNFGVLFHNLPSLTLGNVFVIV
       :. . :. .::..: ::::::. :: .:: ::.:   ...:..:  ..:::. .:...:.
XP_005 MARACLQAVKYLMFAFNLLFWLGGCGVLGVGIWLAATQGSFATLSSSFPSLSAANLLIIT
               10        20        30        40        50        60

      60        70        80        90       100       110         
pF1KB3 GSIIMVVAFLGCMGSIKENKCLLMSFFILLLIILLAEVTLAILLFVYEQKLNEYVAKGLT
       :...:...:.::.:.::::::::..::.:::...: :.:.:::.:.: .:...:. . : 
XP_005 GAFVMAIGFVGCLGAIKENKCLLLTFFLLLLLVFLLEATIAILFFAYTDKIDRYAQQDLK
               70        80        90       100       110       120

     120       130         140       150            160            
pF1KB3 DSIHRYHSDNST--KAAWDSIQSFLQCCGINGTSDW-----TSGPPASC-----------
        ..: : .....    ::. ::. ..:::... .::     ..  : ::           
XP_005 KGLHLYGTQGNVGLTNAWSIIQTDFRCCGVSNYTDWFEVYNATRVPDSCCLEFSESCGLH
              130       140       150       160       170       180

              170       180       190       200       210         
pF1KB3 -PSDRKVEGCYAKARLWFHSNFLYIGIITICVCVIEVLGMSFALTLNCQIDKTSQTIGL
        :.      ::  ...:.. :.: .::. .:. ....::..::.:. ::. :       
XP_005 APGTWWKAPCYETVKVWLQENLLAVGIFGLCTALVQILGLTFAMTMYCQVVKADTYCA 
              190       200       210       220       230         




219 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sat Nov  5 05:02:09 2016 done: Sat Nov  5 05:02:10 2016
 Total Scan time:  5.710 Total Display time:  0.000

Function used was FASTA [36.3.4 Apr, 2011]
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