GENSCAN 1.0 Date run: 5-Nov-116 Time: 04:57:15 Sequence gi568815589f:73058536_73270104 : 211569 bp : 35.96% C+G : Isochore 1 ( 0 - 43 C+G%) Parameter matrix: HumanIso.smat Predicted genes/exons: Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr.. ----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------ 1.06 PlyA - 364 359 6 1.05 1.05 Term - 3085 2806 280 0 1 54 50 149 0.144 1.63 1.04 Intr - 7549 7467 83 1 2 61 53 93 0.149 0.62 1.03 Intr - 8938 8821 118 0 1 84 54 89 0.685 4.65 1.02 Intr - 29367 29223 145 1 1 25 12 132 0.002 -2.28 1.01 Init - 38381 38231 151 2 1 92 67 91 0.748 7.65 1.00 Prom - 38930 38891 40 -4.85 2.00 Prom + 57453 57492 40 -3.45 2.01 Init + 62189 62274 86 1 2 105 82 90 0.996 10.44 2.02 Intr + 62310 62404 95 0 2 35 91 102 0.716 3.89 2.03 Intr + 71559 71699 141 1 0 112 64 83 0.600 7.70 2.04 Intr + 99987 100066 80 1 2 91 81 61 0.064 4.05 2.05 Intr + 100160 100268 109 1 1 86 92 124 0.999 11.54 2.06 Intr + 100794 100888 95 1 2 78 115 142 0.999 14.66 2.07 Intr + 101728 101841 114 0 0 75 94 191 0.999 18.12 2.08 Intr + 102268 102358 91 0 1 78 110 75 0.999 7.35 2.09 Intr + 104247 104326 80 1 2 100 82 67 0.995 5.65 2.10 Intr + 104941 104997 57 0 0 -5 86 115 0.512 0.16 2.11 Intr + 106581 106674 94 2 1 82 77 76 0.853 4.52 2.12 Intr + 107562 107657 96 1 0 8 88 107 0.648 1.76 2.13 Intr + 108962 109020 59 0 2 72 53 35 0.824 -3.92 2.14 Intr + 110497 110619 123 0 0 63 84 115 0.963 8.46 2.15 Term + 114471 114572 102 2 0 77 37 106 0.634 1.70 2.16 PlyA + 114769 114774 6 1.05 3.00 Prom + 121975 122014 40 -3.55 3.01 Init + 133738 133884 147 0 0 80 88 131 0.916 12.44 3.02 Intr + 142126 142260 135 0 0 47 93 57 0.039 1.94 3.03 Intr + 157510 157592 83 0 2 74 83 68 0.006 2.42 3.04 Intr + 165148 165187 40 1 1 90 100 33 0.006 2.01 3.05 Intr + 183612 183804 193 2 1 -5 93 112 0.009 0.54 3.06 Intr + 184631 184712 82 0 1 75 95 29 0.123 0.08 3.07 Intr + 196071 196274 204 0 0 37 20 175 0.021 2.99 3.08 Intr + 207730 207856 127 1 1 33 48 147 0.009 4.96 3.09 Term + 209065 209136 72 0 0 121 39 32 0.841 -1.47 3.10 PlyA + 209159 209164 6 1.05 Suboptimal exons with probability > 0.800 Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr.. ----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------ S.001 Init + 195805 195886 82 0 1 63 88 82 0.813 6.88 Predicted peptide sequence(s): Predicted coding sequence(s): >gi568815589f:73058536_73270104|GENSCAN_predicted_peptide_1|258_aa MDFGINWGSWNQFLIDTEGQLYLSDRDQSVDRNIDSKGNSDEVSDGNEEQVPRDTNTAEG RRDLCLGKPGIVQGFSPCDSLKYGLVGRERPDRPPARHPQPVELLGSRLLLESICKESCD VMCLQVLQPWIPVPALMEMAKAFSNAKHIDESQNAGQNSKRHTEAHPKPSSKFSSKSQLN LSYSLEKWVNPNTHAYIQTVQGENRDPSLHQNGQKTWQMPSDNNVSGGADDTVSYPCICV GKMQWEERKKFSDILECT >gi568815589f:73058536_73270104|GENSCAN_predicted_CDS_1|777_bp atggattttggtatcaattgggggtcttggaaccaattccttatagatactgagggacaa ctctacttaagtgatcgtgaccagagtgttgatagaaatatagacagtaaaggtaattct gatgaggtctcagatggaaatgaggaacaagtacccagggacacaaacactgcggaaggc cgcagggacctctgcctaggaaagccaggtattgtccaaggtttctccccatgtgatagt ctgaaatatggcctcgtgggaagggaaagacctgaccgtcccccagcccgacacccccaa ccagttgagctactgggctccaggctgttactggagagtatctgcaaagagtcctgtgat gtgatgtgtcttcaggtgttgcagccctggataccagtacctgctctgatggagatggca aaagcctttagcaatgctaaacatatagatgaaagtcaaaatgctgggcagaacagtaag aggcacactgaggcccaccccaaaccttcaagtaaattttcttcaaaatcacagctaaat ctcagttacagtcttgaaaaatgggtaaatcccaatacacatgcttatatacaaacagtc cagggagagaacagggatccttctcttcatcagaatggacagaagacatggcagatgcca tcagacaacaatgtttctggtggagccgatgacactgtcagctacccatgcatttgtgtt ggcaagatgcaatgggaagagaggaaaaagttcagtgacattttggaatgcacttga >gi568815589f:73058536_73270104|GENSCAN_predicted_peptide_2|473_aa MEKSVRYSEKPGDEYKEISEPTCKNEELRNILATPRLEATKASGNNTIGTTIELMMMSGN VLYLSLSMGQPGKGKNYSPKEHQDVINLQQKESGQHARKYILIALDWDTFSKMAMVSEFL KQAWFIENEEQEYVQTVKSSKGGPGSAVSPYPTFNPSSDVAALHKAIMVKGVDEATIIDI LTKRNNAQRQQIKAAYLQETGKPLDETLKKALTGHLEEVVLALLKTPAQFDADELRAAMK GLGTDEDTLIEILASRTNKEIRDINRVYREELKRDLAKDITSDTSGDFRNALLSLAKGDR SEDFGVNEDLADSDARALYEAGERRKGTDVNVFNTILTTRSYPQLRRVFQKYTKYSKHDM NKVLDLELKGDIEKCLTAIVKCATSKPAFFAEKLHQAMKGVGTRHKALIRIMVSRSEIDM NDIKAFYQKMYGISLCQAILSQLPSGVTLSEALALNYFLSLPFGLGIPAAAAP >gi568815589f:73058536_73270104|GENSCAN_predicted_CDS_2|1422_bp atggagaagtcagtaagatacagtgagaaaccaggggatgaatataaagagatttcagag cccacgtgtaaaaatgaggagttgaggaatattttggcaactccaagactggaagctacg aaagcatctggaaacaatactattggcacaactattgaactcatgatgatgagtggcaat gttctgtatctaagtctcagcatgggccaaccagggaagggaaaaaattactctccaaaa gaacatcaagacgtgattaatttgcagcaaaaggaatcaggacagcatgccaggaagtat atcttgatagcgctggattgggacactttttcaaaaatggcaatggtatcagaattcctc aagcaggcctggtttattgaaaatgaagagcaggaatatgttcaaactgtgaagtcatcc aaaggtggtcccggatcagcggtgagcccctatcctaccttcaatccatcctcggatgtc gctgccttgcataaggccataatggttaaaggtgtggatgaagcaaccatcattgacatt ctaactaagcgaaacaatgcacagcgtcaacagatcaaagcagcatatctccaggaaaca ggaaagcccctggatgaaacactgaagaaagcccttacaggtcaccttgaggaggttgtt ttagctctgctaaaaactccagcgcaatttgatgctgatgaacttcgtgctgccatgaag ggccttggaactgatgaagatactctaattgagattttggcatcaagaactaacaaagaa atcagagacattaacagggtctacagagaggaactgaagagagatctggccaaagacata acctcagacacatctggagattttcggaacgctttgctttctcttgctaagggtgaccga tctgaggactttggtgtgaatgaagacttggctgattcagatgccagggccttgtatgaa gcaggagaaaggagaaaggggacagacgtaaacgtgttcaataccatccttaccaccaga agctatccacaacttcgcagagtgtttcagaaatacaccaagtacagtaagcatgacatg aacaaagttctggacctggagttgaaaggtgacattgagaaatgcctcacagctatcgtg aagtgcgccacaagcaaaccagctttctttgcagagaagcttcatcaagccatgaaaggt gttggaactcgccataaggcattgatcaggattatggtttcccgttctgaaattgacatg aatgatatcaaagcattctatcagaagatgtatggtatctccctttgccaagccatcctg tcacaacttccatcaggtgtcaccttgtctgaggctctagctctcaactatttcctctcc ttgccctttggacttgggattcctgctgctgctgctccgtag >gi568815589f:73058536_73270104|GENSCAN_predicted_peptide_3|360_aa MDGFKRIVLQPELKCFQDKTVSKMTYRKSSTCGNGILEPTEQCDCGYKEVSGDSGRQTSF EVNRITFSLAKAMGWVQCDMTNIYSSWENIYIVKNCLINESVSLDENRLFLKEQIKDFQS WSCIDSITVVNTCRKPLRTVLSTVRLNFLFPVVGFPIHLSNCLSFMLLKANLHADPAQLE VLGQSTTDQFTAFLYGNAEGRRFEVSPVNSGFPNYTCTTSKQDRAMRYGLELELMFKRKA EHKHSENLQAEDEKERKTPFSEEKFKPAAEICISIEELNANCQDNGENVSRAYQRMVTAR ETCNAYLRKLQALDSNQRTATRAALSKAIEVKLPEALVPICPSTLSNQLKQHTTLTRWAA >gi568815589f:73058536_73270104|GENSCAN_predicted_CDS_3|1083_bp atggatggatttaaacggatagttctgcagcctgaacttaaatgttttcaggataaaaca gtttcaaaaatgacttaccgaaaatcttcaacttgtggcaatggaattttggaacctaca gagcagtgtgattgtggctataaagaggtatcaggtgacagtggaagacaaacttctttt gaggtaaacagaattactttttcccttgcaaaggccatgggatgggtccaatgtgatatg acgaacatctattcttcttgggaaaacatttatattgtgaagaattgcttgatcaacgaa agcgtgtctcttgatgaaaacagactgttcctcaaagaacaaattaaggactttcagtcc tggagctgcattgactctattactgtggtgaacacctgcaggaagcctttaagaacggtt ctttcaaccgttcggctgaacttccttttccctgtggttgggtttcctattcatttgtca aattgcttgagtttcatgctgctaaaagcaaatttacatgcagatccagcacaacttgag gttcttggccagtctacaactgaccagttcacagccttcctctatggaaatgcagaaggt agaaggtttgaagtttctcctgtgaattctggcttcccaaattatacttgcacaaccagt aaacaggacagagccatgcgatatggtttggaattggaacttatgtttaaaaggaaagca gagcataaacattcagaaaatttgcaggctgaagacgagaaagaaaggaaaaccccattt tctgaggagaaattcaagccagctgcagaaatttgcataagtattgaggagctaaatgcc aattgccaagacaatggggaaaatgtctccagggcatatcagagaatggttacagcacga gaaacatgcaatgcctacctgagaaagctacaggcactggactctaaccagcgaacagcc acgcgagctgcactcagcaaagccatagaggtgaagctacctgaggccttggtgcccatt tgtccttccactctgagcaatcagttgaagcaacacacgaccctcaccagatgggctgcc tga