GENSCAN 1.0	Date run:  5-Nov-116	Time: 04:33:37

Sequence gi568815578r:44520298_44736285 : 215988 bp : 47.13% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.03 PlyA -   1993   1988    6                               1.05
 1.02 Term -   5981   5920   62  0  2  112   42    20 0.343  -2.23
 1.01 Init -  11903  11390  514  2  1   53   51   284 0.786  16.27
 1.00 Prom -  17126  17087   40                              -2.06

 2.00 Prom +  28730  28769   40                              -2.16
 2.01 Init +  49869  49884   16  2  1   83   79     5 0.454  -0.53
 2.02 Term +  56619  56680   62  1  2  104   49    88 0.868   4.47
 2.03 PlyA +  58394  58399    6                               1.05

 3.03 PlyA -  60370  60365    6                               1.05
 3.02 Term -  70543  70293  251  2  2   68   48   185 0.184   8.37
 3.01 Init -  90138  90051   88  0  1   61   94    72 0.948   5.90
 3.00 Prom -  91675  91636   40                              -7.76

 4.00 Prom +  91751  91790   40                              -3.46
 4.01 Init +  94263  94410  148  2  1   96   66   226 0.631  21.45
 4.02 Term +  96222  96337  116  1  2  112   44    18 0.407  -1.47
 4.03 PlyA +  96549  96554    6                               1.05

 5.14 PlyA -  98329  98324    6                               1.05
 5.13 Term -  98982  98969   14  1  2   80   42    17 0.504  -5.34
 5.12 Intr - 100104 100002  103  0  1   81   96   108 0.999  10.65
 5.11 Intr - 100850 100721  130  1  1  123  105   227 0.999  28.60
 5.10 Intr - 102355 102291   65  1  2   72   97    47 0.998   1.52
 5.09 Intr - 102633 102532  102  0  0  105   99    86 0.999  11.77
 5.08 Intr - 102781 102710   72  1  0  110   78    67 0.959   7.50
 5.07 Intr - 104032 103905  128  2  2   55   94   189 0.986  16.60
 5.06 Intr - 105387 105272  116  2  2   95   81   171 0.999  17.19
 5.05 Intr - 106302 106159  144  2  0  102   61   202 0.998  18.30
 5.04 Intr - 108872 108750  123  1  0   99   77   180 0.998  17.70
 5.03 Intr - 114588 114445  144  2  0   33  119    35 0.162   0.50
 5.02 Intr - 115991 115930   62  2  2  152  111    39 0.326  10.13
 5.01 Init - 131310 131278   33  0  0  120   61    75 0.372   7.87
 5.00 Prom - 141256 141217   40                              -4.36

 6.00 Prom + 141378 141417   40                              -7.36
 6.01 Init + 143226 143259   34  2  1   83   99    51 0.599   5.73
 6.02 Intr + 151723 151857  135  2  0  100   80    24 0.455   3.34
 6.03 Intr + 155504 155617  114  0  0   76   30   108 0.581   4.22
 6.04 Intr + 159730 159783   54  2  0   82   93    32 0.262   2.05
 6.05 Term + 169632 169801  170  1  2   91   47    94 0.348   3.64
 6.06 PlyA + 171065 171070    6                               1.05

 7.00 Prom + 173705 173744   40                              -3.16
 7.01 Init + 195094 195153   60  0  0   76  116    78 0.956   8.66
 7.02 Intr + 199600 199816  217  0  1   91   58   202 0.940  15.58
 7.03 Intr + 204441 204695  255  1  0   82  105   296 0.621  28.12
 7.04 Term + 206790 207010  221  1  2  151   43    87 0.961   7.70
 7.05 PlyA + 208676 208681    6                               1.05

 8.02 PlyA - 211819 211814    6                               1.05
 8.01 Term - 214329 214224  106  2  1   86   48    87 0.279   2.38

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Intr + 125783 125862   80  2  2   83   53    49 0.938   0.09


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815578r:44520298_44736285|GENSCAN_predicted_peptide_1|191_aa
MATNIINSRKRTLPERGAGSKGVGGAVPGAAEGQRSGRSLPPRDPRRLSPSPPATCRRQA
RSVGAATGRPAPAHLRSRRLSVPGPPVRSASPGQPSARSPQPAAEPVALATWAAELPRHS
RYGGSDGTRTVRVPFRSRGGGRGGTKWESRAELRRRDPGWNLARGRYGKGDSIFMACFLG
SLMSVLQCQAL

>gi568815578r:44520298_44736285|GENSCAN_predicted_CDS_1|576_bp
atggctacaaatataataaacagccgaaaacggactctccctgaacgcggggcggggtca
aagggcgtcgggggcgccgtccccggcgcggctgagggacaaagatcgggccgcagcctc
cctccccgggatccccggcggctcagcccctcgccccctgcgacgtgtcgacgccaggcc
cggagcgttggggccgcaaccggccgcccggctcctgctcacctgcggtctcgccgcctc
tccgtgcctgggccgccggtccgcagcgcctccccggggcagcctagcgcccgcagcccg
caacccgcagcggagcccgttgccttggcgacctgggctgccgaactcccgcggcactcg
cgctacggcggctcggatgggaccaggacggttcgcgtccccttccgcagccgcggaggg
ggcagaggagggacgaagtgggagtcgagggctgagctgcgaaggagggatccgggttgg
aacttggcccggggaagatacggaaagggggacagtatctttatggcttgcttcctcggt
tccctcatgtctgtgctccagtgtcaagccctctaa

>gi568815578r:44520298_44736285|GENSCAN_predicted_peptide_2|25_aa
MDCEPDTPNQQSKGDHKVDPQDIEP

>gi568815578r:44520298_44736285|GENSCAN_predicted_CDS_2|78_bp
atggactgtgagccagacacaccaaatcagcagtccaaaggggaccacaaagtggatcct
caggacatcgaaccctga

>gi568815578r:44520298_44736285|GENSCAN_predicted_peptide_3|112_aa
MEGKAHIPPQHLAQKKHLKNELGALKDQTAFSPHTILSLWTDAQWIRQALQSDALIPRLF
SLFVKIPAMEKVQVGVGQSRIAFNSDTLTTTSMDADGCLVGEKISVDPVLPT

>gi568815578r:44520298_44736285|GENSCAN_predicted_CDS_3|339_bp
atggagggcaaggcccacatccccccacaacacctagctcagaagaaacacctaaagaat
gaattaggggccctcaaagatcagacagctttcagtcctcacaccatccttagcttatgg
acagatgcacagtggattcggcaagctcttcagagcgatgcgctcatccccaggctcttt
agcctctttgtgaaaattccagctatggagaaggtccaggtgggtgtaggccaatctaga
atagccttcaattctgataccttaacaaccacatccatggatgctgatggatgcctggtg
ggtgaaaagatctctgtggacccagtacttccaacttga

>gi568815578r:44520298_44736285|GENSCAN_predicted_peptide_4|87_aa
MEVESSYSDFISCDRTGRRNAVPDIQGDSEAVSVRKLAGDMGELALEGAAVVAAGPCAQA
LLTPVFPDSDSLKYGSSGYMTFTCQGD

>gi568815578r:44520298_44736285|GENSCAN_predicted_CDS_4|264_bp
atggaggtcgagtcctcctactcggacttcatctcctgtgaccggacaggccgtcggaat
gcggtccctgacatccagggagactcagaggctgtgagcgtgaggaagctggctggagac
atgggcgagctggcactcgagggggcagcagttgtagctgctggcccatgtgcccaggct
ctcctaacacctgttttccctgactcagattccctaaagtatgggtcctctggctacatg
acattcacctgccagggtgactga

>gi568815578r:44520298_44736285|GENSCAN_predicted_peptide_5|411_aa
MAQTPAFDKPKVELHVHLDGSIKPETILYYGSSGPKFEHFCSISQNPVIQRPALMERMRD
PGGLPPTLGSISTNSLRDFWRRGIALPANTAEGLLNVIGMDKPLTLPDFLAKFDYYMPAI
AGCREAIKRIAYEFVEMKAKEGVVYVEVRYSPHLLANSKVEPIPWNQAEGDLTPDEVVAL
VGQGLQEGERDFGVKARSILCCMRHQPNWSPKVVELCKKYQQQTVVAIDLAGDETIPGSS
LLPGHVQAYQEAVKSGIHRTVHAGEVGSAEVVKEAVDILKTERLGHGYHTLEDQALYNRL
RQENMHFEICPWSSYLTGAWKPDTEHAVIRLKNDQANYSLNTDDPLIFKSTLDTDYQMTK
RDMGFTEEEFKRLNINAAKSSFLPEDEKRELLDLLYKAYGMPPSASAGFKE

>gi568815578r:44520298_44736285|GENSCAN_predicted_CDS_5|1236_bp
atggcccagacgcccgccttcgacaagcccaaagtggaactgcatgtccacctagacgga
tccatcaagcctgaaaccatcttatactatggcagctcgggacccaaatttgaacatttc
tgctccataagccagaatcctgttattcagaggcctgccctcatggagagaatgagggat
cccggggggttgcccccaactctcgggagcatctccaccaactccctgagagatttctgg
aggagagggatcgccctcccagctaacacagcagaggggctgctgaacgtcattggcatg
gacaagccgctcacccttccagacttcctggccaagtttgactactacatgcctgctatc
gcgggctgccgggaggctatcaaaaggatcgcctatgagtttgtagagatgaaggccaaa
gagggcgtggtgtatgtggaggtgcggtacagtccgcacctgctggccaactccaaagtg
gagccaatcccctggaaccaggctgaaggggacctcaccccagacgaggtggtggcccta
gtgggccagggcctgcaggagggggagcgagacttcggggtcaaggcccggtccatcctg
tgctgcatgcgccaccagcccaactggtcccccaaggtggtggagctgtgtaagaagtac
cagcagcagaccgtggtagccattgacctggctggagatgagaccatcccaggaagcagc
ctcttgcctggacatgtccaggcctaccaggaggctgtgaagagcggcattcaccgtact
gtccacgccggggaggtgggctcggccgaagtagtaaaagaggctgtggacatactcaag
acagagcggctgggacacggctaccacaccctggaagaccaggccctttataacaggctg
cggcaggaaaacatgcacttcgagatctgcccctggtccagctacctcactggtgcctgg
aagccggacacggagcatgcagtcattcggctcaaaaatgaccaggctaactactcgctc
aacacagatgacccgctcatcttcaagtccaccctggacactgattaccagatgaccaaa
cgggacatgggctttactgaagaggagtttaaaaggctgaacatcaatgcggccaaatct
agtttcctcccagaagatgaaaagagggagcttctcgacctgctctataaagcctatggg
atgccaccttcagcctctgcaggttttaaggagtaa

>gi568815578r:44520298_44736285|GENSCAN_predicted_peptide_6|168_aa
MEDGKQAIKSSDERERVFSLAQSHADNRRLHEPDLQEGSRAVPREDPQWNYQADSPGKME
RTNGLFKTHLTKLSLQLKKEDSVKDTAQKLNNQAKTLYLSAVSPAADPPLAPGPPGGWSG
LSSKKLELDVGFLRAEEGLARDLQKEKCIPPRVKSEGALQQWPSVGHL

>gi568815578r:44520298_44736285|GENSCAN_predicted_CDS_6|507_bp
atggaggatgggaagcaggccatcaagagttctgatgaacgggaaagagttttttctcta
gcccaatctcacgctgataaccgccggcttcatgaacctgacctccaggaaggcagtaga
gcagttccccgagaggacccccaatggaactatcaggcagattccccaggaaagatggaa
cggactaatggtcttttcaagacacacctcaccaagctcagcctccaacttaaaaaggag
gactctgtcaaggatacagcccaaaaactcaacaaccaagcaaaaaccctgtacctatca
gcagtcagtcctgcagccgacccccctctggccccagggcctcctggagggtggagtggt
cttagcagcaagaagctggagttggatgttggattcctgagggccgaggaaggacttgca
agggacctccagaaggagaagtgcatcccccccagggtcaagagtgagggagccctgcag
caatggccatctgtgggacatctgtga

>gi568815578r:44520298_44736285|GENSCAN_predicted_peptide_7|250_aa
MRGTPKTHLLAFSLLCLLSKVRTQLCPTPCTCPWPPPRCPLGVPLVLDGCGCCRVCARRL
GEPCDQLHVCDASQGLVCQPGAGPGGRGALCLLAEDDSSCEVNGRLYREGETFQPHCSIR
CRCEDGGFTCVPLCSEDVRLPSWDCPHPRRVEVLGKCCPEWVCGQGGGLGTQPLPAQGPQ
FSGLVSSLPPGVPCPEWSTAWGPCSTTCGLGMATRVSNQNRFCRLETQRRLCLSRPCPPS
RGRSPQNSAF

>gi568815578r:44520298_44736285|GENSCAN_predicted_CDS_7|753_bp
atgagaggcacaccgaagacccacctcctggccttctccctcctctgcctcctctcaaag
gtgcgtacccagctgtgcccgacaccatgtacctgcccctggccacctccccgatgcccg
ctgggagtacccctggtgctggatggctgtggctgctgccgggtatgtgcacggcggctg
ggggagccctgcgaccaactccacgtctgcgacgccagccagggcctggtctgccagccc
ggggcaggacccggtggccggggggccctgtgcctcttggcagaggacgacagcagctgt
gaggtgaacggccgcctgtatcgggaaggggagaccttccagccccactgcagcatccgc
tgccgctgcgaggacggcggcttcacctgcgtgccgctgtgcagcgaggatgtgcggctg
cccagctgggactgcccccaccccaggagggtcgaggtcctgggcaagtgctgccctgag
tgggtgtgcggccaaggagggggactggggacccagccccttccagcccaaggaccccag
ttttctggccttgtctcttccctgccccctggtgtcccctgcccagaatggagcacggcc
tggggaccctgctcgaccacctgtgggctgggcatggccacccgggtgtccaaccagaac
cgcttctgccgactggagacccagcgccgcctgtgcctgtccaggccctgcccaccctcc
aggggtcgcagtccacaaaacagtgccttctag

>gi568815578r:44520298_44736285|GENSCAN_predicted_peptide_8|35_aa
XAGEKLLKRFTLGYWPSNRDWMKRPGPAKTLKPFS

>gi568815578r:44520298_44736285|GENSCAN_predicted_CDS_8|108_bp
nnggcaggggagaagctgctgaagaggttcacgttaggttattggccatccaacagagac
tggatgaaaagacctggcccagcgaagacgttaaaacctttttcatga